Chronic low-level nutrient enrichment benefits coral thermal performance in a fore reef habitat

Global- and local-scale anthropogenic stressors have been the main drivers of coral reef decline, causing shifts in coral reef community composition and ecosystem functioning. Excess nutrient enrichment can make corals more vulnerable to ocean warming by suppressing calcification and reducing photosynthetic performance. However, in some environments, corals can exhibit higher growth rates and thermal performance in response to nutrient enrichment. In this study, we measured how chronic nutrient enrichment at low concentrations affected coral physiology, including endosymbiont and coral host response variables, and holobiont metabolic responses of Pocillopora spp. colonies in Mo'orea, French Polynesia. We experimentally enriched corals with dissolved inorganic nitrogen and phosphate for 15 months on an oligotrophic fore reef in Mo'orea. We first characterized symbiont and coral physiological traits due to enrichment and then used thermal performance curves to quantify the relationship between metabolic rates and temperature for experimentally enriched and control coral colonies. We found that endosymbiont densities and total tissue biomass were 54% and 22% higher in nutrient-enriched corals, respectively, relative to controls. Algal endosymbiont nitrogen content cell⁻¹ was 44% lower in enriched corals relative to the control colonies. In addition, thermal performance metrics indicated that the maximal rate of performance for gross photosynthesis was 29% higher and the rate of oxygen evolution at a reference temperature (26.8 °C) for gross photosynthesis was 33% higher in enriched colonies compared to the control colonies. These differences were not attributed to symbiont community composition between corals in different treatments, as C42, a symbiont type in the Cladocopium genus, was the dominant endosymbiont type found in all corals. Together, our results show that in an oligotrophic fore reef environment, nutrient enrichment can cause changes in coral endosymbiont physiology that increase the performance of the coral holobiont.

     

Species-specific habitat distribution of coral reef fish assemblages in relation to habitat characteristics in an Okinawan coral reef

We determined the species-specific habitat associations of coral reef fishes and environmental characteristics in an Okinawan coral reef in Japan. We focused on three families (Pomacentridae, Gobiidae and Labridae) and attempted to determine differences in habitat utilization. We selected six sites along the coast of Amitori Bay, from the entrance to the innermost part, in order to cover a wide range of habitat characteristics (exposed habitat, semi-exposed habitat and sheltered habitat). The species diversity of coral assemblages was greater at the exposed and semi-exposed habitats, whereas branching coral mostly covered the sheltered habitat. The environmental factors that determine the species-specific spatial association in fishes differed among families. Both biological characteristics (coral morphology and coral species diversity) and physical characteristics (water depth and wave exposure) affected the spatial association of pomacentrids and gobiids. In contrast, physical characteristics such as substrate complexity and water depth affected the species-specific spatial association of labrid species. Further study is needed to determine the ecological factors that regulate the species-specific habitat preference in Okinawan coral reefs.     

Effects of herbivore exclusion and nutrient enrichment on coral reef macroalgae and cyanobacteria

Although phase shifts on coral reefs from coral-dominated to algal-dominated communities have been attributed to the effects of increased nutrient availability due to eutrophication and reduced herbivore abundance due to overfishing and disease, these factors have rarely been manipulated simultaneously. In addition, few studies have considered the effects of these factors on benthic, filamentous cyanobacteria (blue-green algae) as well as macroalgae. We used a combination of herbivore-exclusion cages and nutrient enrichment to manipulate herbivore abundance and nutrient availability, and measured the impacts of these treatments on macroalgal and cyanobacterial community structure. In the absence of cages, surface cover of the cyanobacterium Tolypothrix sp. decreased, while surface cover of the cyanobacteria Oscillatoria spp. increased. Cyanobacterial cover decreased in partial cages, and Tolypothrix sp. cover decreased further in full cages. Lower cyanobacterial cover and biomass were correlated with higher macroalgal cover and biomass. Dictyota bartayresiana dominated the partial cages, while Padina tenuis and Tolypiocladia glomerulata recruited into the full cages. Palatability assays demonstrated that herbivore-exclusion shifted macroalgal species composition from relatively unpalatable to relatively palatable species. Nutrient enrichment interacted with herbivore exclusion to increase the change in cover of D. bartayresiana in the uncaged and fully caged plots, but did not affect the final biomass of D. bartayresiana among treatments. Nutrient enrichment did not significantly affect the cover or biomass of any other taxa. These results stress the critical role of herbivory in determining coral reef community structure and suggest that the relative palatabilities of dominant algae, as well as algal growth responses to nutrient enrichment, will determine the potential for phase shifts to algal-dominated communities.     

Correction to: Skeletal records of bleaching reveal different thermal thresholds of Pacific coral reef assemblages

Coral Reefs - Figure 2 in the original article has been updated with this figure 2 due to discrepancies related to incorrect mapping with one of the islands.     

Specialization in habitat use by coral reef damselfishes and their susceptibility to habitat loss

While it is generally assumed that specialist species are more vulnerable to disturbance compared with generalist counterparts, this has rarely been tested in coastal marine ecosystems, which are increasingly subject to a wide range of natural and anthropogenic disturbances. Habitat specialists are expected to be more vulnerable to habitat loss because habitat availability exerts a greater limitation on population size, but it is also possible that specialist species may escape effects of disturbance if they use habitats that are generally resilient to disturbance. This study quantified specificity in use of different coral species by six coral‐dwelling damselfishes (Chromis viridis, C. atripectoralis, Dascyllus aruanus, D. reticulatus, Pomacentrus moluccensis, and P. amboinensis) and related habitat specialization to proportional declines in their abundance following habitat degradation caused by outbreaks of the coral eating starfish, Acanthaster planci. The coral species preferred by most coral‐dwelling damselfishes (e.g., Pocillopora damicornis) were frequently consumed by coral eating crown‐of‐thorns starfish, such that highly specialized damselfishes were disproportionately affected by coral depletion, despite using a narrower range of different coral species. Vulnerability of damselfishes to this disturbance was strongly correlated with both their reliance on corals and their degree of habitat specialization. Ongoing disturbances to coral reef ecosystems are expected, therefore, to lead to fundamental shifts in the community structure of fish communities where generalists are favored over highly specialist species.     

Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching

Nutrient loading is one of the strongest drivers of marine habitat degradation. Yet, the link between nutrients and disease epizootics in marine organisms is often tenuous and supported only by correlative data. Here, we present experimental evidence that chronic nutrient exposure leads to increases in both disease prevalence and severity and coral bleaching in scleractinian corals, the major habitat‐forming organisms in tropical reefs. Over 3 years, from June 2009 to June 2012, we continuously exposed areas of a coral reef to elevated levels of nitrogen and phosphorus. At the termination of the enrichment, we surveyed over 1200 scleractinian corals for signs of disease or bleaching. Siderastrea siderea corals within enrichment plots had a twofold increase in both the prevalence and severity of disease compared with corals in unenriched control plots. In addition, elevated nutrient loading increased coral bleaching; Agaricia spp. of corals exposed to nutrients suffered a 3.5‐fold increase in bleaching frequency relative to control corals, providing empirical support for a hypothesized link between nutrient loading and bleaching‐induced coral declines. However, 1 year later, after nutrient enrichment had been terminated for 10 months, there were no differences in coral disease or coral bleaching prevalence between the previously enriched and control treatments. Given that our experimental enrichments were well within the ranges of ambient nutrient concentrations found on many degraded reefs worldwide, these data provide strong empirical support to the idea that coastal nutrient loading is one of the major factors contributing to the increasing levels of both coral disease and coral bleaching. Yet, these data also suggest that simple improvements to water quality may be an effective way to mitigate some coral disease epizootics and the corresponding loss of coral cover in the future.     

Distributions of coral reef macroalgae in a back reef habitat in Moorea,French Polynesia

On tropical reefs where macroalgae are subjected to continuous herbivore pressure, spatial refuges typically are identified as large-scale, landscape interfaces that limit foraging behavior. However, algal distributions and community assemblages may also rely on the availability of smaller scale spatial refuges within the reef. The results of this study demonstrate that the patterns of macroalgal distribution across the back reef of Moorea, French Polynesia, are maintained by herbivores interacting with the small-scale structural complexities of the coral reef landscape. Although the majority of space available for colonization is composed of exposed surfaces, macroalgae rarely are found in the open. Instead, macroalgal occurrence is highest in the protected narrow crevices and hole microhabitats provided by massive Porites spp. coral heads. These distributions are determined initially by post-settlement mortality of young algal recruits in exposed habitats. Rates of consumption for two of the most common macroalgal species found in refuges across the back reef, Halimeda minima and Amansia rhodantha, indicate that algal recruits in exposed habitats are limited by herbivory. While algal abundance and community structure are highly dependent upon herbivore grazing, the availability of small-scale spatial refuges ultimately shapes the distinct community patterns and distributional boundaries of coral reef macroalgae in the back reefs of Moorea.     

Near-surface enrichment of zooplankton over a shallow back reef: implications for coral reef food webs

Zooplankton were 3–8 times more abundant during the day near the surface than elsewhere in the water column over a 1–2.4 m deep back reef in Moorea, French Polynesia. Zooplankton were also significantly more abundant near the surface at night although gradients were most pronounced under moonlight. Zooplankton in a unidirectional current became concentrated near the surface within 2 m of departing a well-mixed trough immediately behind the reef crest, indicating that upward swimming behavior, rather than near-bottom depletion by reef planktivores, was the proximal cause of these gradients. Zooplankton were highly enriched near the surface before and after a full lunar eclipse but distributed evenly throughout the water column during the eclipse itself supporting light as a proximal cue for the upward swimming behavior of many taxa. This is the first investigation of the vertical distribution of zooplankton over a shallow back reef typical of island barrier reef systems common around the world. Previous studies on deeper fringing reefs found zooplankton depletion near the bottom but no enrichment aloft. In Moorea, where seawater is continuously recirculated out the lagoon and back across the reef crest onto the back reef, selection for upward swimming behavior may be especially strong, because the surface serves both as a refuge from predation and an optimum location for retention within the reef system. Planktivorous fish and corals that can forage or grow even marginally higher in the water column might have a substantial competitive advantage over those nearer the bottom on shallow reefs. Zooplankton abundance varied more over a few tens of centimeters vertical distance than it did between seasons or even between day and night indicating that great care must be taken to accurately assess the availability of zooplankton as food on shallow reefs.     

Community metabolism of a coral reef exposed to naturally varying dissolved inorganic nutrient loads

Daily community rates of calcification, photosynthesis and respiration were measured on a coral reef located in the Northern Red Sea, Gulf of Eilat, Israel between March 2000 and March 2002. This reef is exposed to seasonally varying levels of inorganic nutrient loading due to mixing and stratification of the adjacent open sea water column. Net production measurements were positively and linearly correlated with open sea nutrient levels, and the community photosynthesis to respiration ratio varied between 0.9 and 1.7 accordingly. Community calcification varied between 30 ± 20 and 60 ± 20 mmol C m⁻² day⁻¹ during summer and winter, respectively. Under increased nutrient loading the relation between community calcification and aragonite saturation state is suppressed by 30% on average. Both of these findings demonstrate the deleterious effects of nutrient loading on coral reefs.     

Highlighting ontogenetic shifts in habitat use by nocturnal coral reef fish

The lagoon of Moorea Island was characterised by 12 distinct reef zones. Visual censuses allowed us to document the spatial distributions of recently settled juveniles vs adults of 17 nocturnal fish species among the 12 reef zones. Five distinct patterns in habitat use were found: an increase in the number of reef zones used during the adult stage (four species); a decrease in the number of reef zones adults used compared to recently settled juveniles (two species); the use of different reef zones (one species); the use of same reef zones but with relative densities different (one species); and no change in habitat use (nine species). Overall, this study is the first to explore the use of space by a broad range of nocturnal fish taxa to document the patterns and determinism of habitat shifts between juvenile and adult life stages.     

The impact of CO2 emission scenarios and nutrient enrichment on a common coral reef macroalga is modified by temporal effects

Future coral reefs are expected to be subject to higher pCO₂ and temperature due to anthropogenic greenhouse gas emissions. Such global stressors are often paired with local stressors thereby potentially modifying the response of organisms. Benthic macroalgae are strong competitors to corals and are assumed to do well under future conditions. The present study aimed to assess the impact of past and future CO₂ emission scenarios as well as nutrient enrichment on the growth, productivity, pigment, and tissue nutrient content of the common tropical brown alga Chnoospora implexa. Two experiments were conducted to assess the differential impacts of the manipulated conditions in winter and spring. Chnoospora implexa's growth rate averaged over winter and spring declined with increasing pCO₂ and temperature. Furthermore, nutrient enrichment did not affect growth. Highest growth was observed under spring pre‐industrial (PI) conditions, while slightly reduced growth was observed under winter A1FI (“business‐as‐usual”) scenarios. Productivity was not a good proxy for growth, as net O₂ flux increased under A1FI conditions. Nutrient enrichment, whilst not affecting growth, led to luxury nutrient uptake that was greater in winter than in spring. The findings suggest that in contrast with previous work, C. implexa is not likely to show enhanced growth under future conditions in isolation or in conjunction with nutrient enrichment. Instead, the results suggest that greatest growth rates for this species appear to be a feature of the PI past, with A1FI winter conditions leading to potential decreases in the abundance of this species from present day levels.     

Effects of nutrient enhancement on the fecundity of a coral reef macroalga

On coral reefs, there is concern that increased nutrient supply (e.g. due to eutrophication) causes increased algal growth and hence increased algal abundance, in turn causing colonisation and invasions of coral populations, resulting in reef degradation, or a coral-algal phase shift. For example, species of Sargassum, a highly seasonal, large, brown seaweed, are suggested to be colonising corals on inshore coral reefs of the Great Barrier Reef, as a result of anthropogenic increases in terrestrial runoff of sediments and nutrients. However, implicit in this argument is the assumption that nutrient-related increases in growth will lead to increased fecundity (and/or propagule success), since without such changes, increased abundance can only occur by vegetative means. Whilst plausible, there is no experimental evidence for this assumption in coral reef algae.We here present an initial study in which experimental increases in nutrient supply apparently did not lead to increased fecundity of Sargassum siliquosum; rather, density and biomass of receptacles were reduced in nutrient-enhanced algae. There was little effect of nutrient treatments on the proportional allocation of biomass to reproductive and vegetative structures: nutrient enhancement led to similar decreases in biomass of reproductive and vegetative tissue. Tissue nutrient levels indicated effective enhancement of nitrogen supply, although phosphorus levels were not different across nutrient treatments.The reduced fecundity with increased nutrients may reflect either a genuine inhibition by higher nutrient levels, as found in previous studies, or accelerated maturation, causing increased tissue losses due to more advanced seasonal senescence. Either way, this exploratory experiment provides initial evidence that nutrient effects on tropical coral reef macroalgae may be complex, and does not support the assumption that increased nutrient supply will result in a numeric increase in populations of Sargassum spp. Our results should not be taken as an unequivocal demonstration that nutrients inhibit fecundity overall, but illustrate the need to distinguish between effects on different life-history processes (e.g. growth and reproduction). For increased growth of pre-existing individuals to contribute to algal invasions and phase shifts, that growth must result in either increased fecundity, or increased propagule success.     

Performance of remote acoustic receivers within a coral reef habitat: implications for array design

Remote monitoring technologies are increasingly being implemented in the marine environment to better understand the movement patterns of taxa. Coral reefs are no exception. However, there is a paucity of information relating to the performance of acoustic receivers on coral reefs. Our results suggest that the detection performance of acoustic receivers may be significantly impacted by the unique nature of the reef environment. This study assessed the performance of passive acoustic receivers on a typical inner-shelf fringing reef, Orpheus Island, on the Great Barrier Reef, Australia. The detection range and diel performance variability of acoustic receivers was assessed using two parallel lines of 5 VR2W receivers spanning 125?m, deployed on the reef base and reef crest. Two 9-mm acoustic transmitters were moored at opposite ends of each receiver line. The working detection range for receivers was found to be approximately 90?m for the transmitter moored on the reef base and just 60?m for the transmitter moored on the reef crest. However, the detection range on the reef crest increased to 90?m when just the reef crest receivers were considered, highlighting importance of optimal receiver deployment. No diel patterns in receiver performance or detection capacities were detected, suggesting that no corrections are required when interpreting nocturnal versus diurnal activity patterns. We suggest that studies aiming for complete coverage of a site within a reef environment will require receivers in close (<100?m) proximity, and that the placement depth of receivers must be a major consideration, with shallow receivers exhibiting a greater detection range than those on the reef slope. Our results highlight the challenges imposed by coral reefs for acoustic telemetry and the importance of receiver placement for studies conducted within these habitats.     

Synergistic effects of habitat preference and gregarious behaviour on habitat use in coral reef cardinalfish

Spatial distributions of coral reef fish species are potentially determined by habitat preferences and behavioural interactions. However, the relative importance of these factors and whether or not behavioural interactions reinforce or disrupt habitat associations are poorly understood. This paper explores the degree to which habitat and social preferences explain the association that three common coral reef cardinalfish species (Zoramia leptacanthus, Archamia zosterophora and Cheilodipterus quinquelineatus; family Apogonidae) have with coral substrata at Lizard Island, Great Barrier Reef. At diurnal resting sites, species were strongly associated with branching corals, with 80–90% of each species inhabiting one branching coral species, Porites cylindrica. Species were also highly gregarious, forming large con-specific and hetero-specific aggregations in coral heads, potentially reinforcing habitat associations. Three-way choice experiments were conducted to test fishes habitat preferences for living coral over dead substrata, for particular coral species, and the influence of gregarious behaviour on these habitat choices. The strength of habitat preferences differed among species, with Z. leptacanthus preferring live coral and P. cylindrica, A. zosterophora preferring P. cylindrica, whether live or dead and C. quinquelineatus exhibiting no preferences. All species were attracted to conspecifics, and for C. quinquelineatus and A. zosterophora, conspecific attraction resulted in stronger preferences for live corals. Gregarious behaviour also increased C. quinquelineatus associations with P. cylindrica. The relative strength of social attraction versus habitat preferences was investigated by comparing fish habitat preferences in the presence and/or absence of conspecifics. The presence of conspecifics on non-preferred rubble habitat reduced each species association with live coral. This study’s results indicate that in the field, habitat preferences and conspecific attraction combine to reinforce the association between cardinalfishes and a narrow range of coral substrata.     

Anthropogenic nutrient enrichment of seagrass and coral reef communities in the Lower Florida Keys: discrimination of local versus regional nitrogen sources

Land-based nutrient pollution represents a significant human threat to coral reefs globally. We examined this phenomenon in shallow seagrass and coral reef communities between the Content Keys (southern Florida Bay) and Looe Key (south of Big Pine Key) in the Lower Florida Keys by quantifying the role of physical forcing (rainfall, wind, tides) and water management on mainland South Florida to nutrient enrichment and blooms of phytoplankton, macroalgae, and seagrass epiphytes. Initial studies (Phase I) in 1996 involved daily water quality sampling (prior to, during, and following physical forcing events) at three stations (AJ, an inshore area directly impacted by sewage discharges; PR, a nearshore patch reef located inshore of Hawk Channel; and LK, an offshore bank reef at Looe Key) to assess the spatial and temporal patterns in advection of land-based nutrients to the offshore reefs. Concentrations of dissolved inorganic nitrogen (DIN=NH₄⁺+NO₃⁻+NO₂⁻), soluble reactive phosphorus (SRP), and chlorophyll a increased at PR and LK following a wind event (∼15 knots, northeast) in mid-February. The highest DIN (mostly NH₄⁺) and SRP concentrations of the entire study occurred at the inshore AJ during an extreme low tide in March. Following the onset of the wet season in May, mean NH₄⁺ and chlorophyll a concentrations increased significantly to maximum seasonal values at PR and LK during summer; relatively low concentrations of NO₃⁻ and a low f-ratio (NO₃⁻/NH₄⁺+NO₃⁻) at all stations during summer do not support the hypothesis that the seasonal phytoplankton blooms resulted from upwelling of NO₃⁻. A bloom of the seagrass epiphyte Cladosiphon occidentalis (phaeophyta) followed the onset of the rainy season and increased NH₄⁺ concentrations at LK, resulting in very high epiphyte:blade ratios (∼3:1) on Thalassia testudinum. Biomass of macroalgae increased at all three stations from relatively low values (<50 g dry wt m⁻²) in winter and early spring to higher values (∼100-300 g dry wt m⁻²) typical of eutrophic seagrass meadows and coral reefs following the onset of the rainy season. The mean δ¹⁵N value of Laurencia intricata (rhodophyta) during 1996 at AJ (+4.7‰) was within the range reported for macroalgae growing on sewage nitrogen; lower values at the more offshore PR (+3.1‰) and LK (+2.9‰) were at the low end of the sewage range, indicating an offshore dilution of the sewage signal during the 1996 study. However, transient increases in δ¹⁵N of Cladophora catanata (chlorophtyta) from ~+2% to +5% at LK concurrent with elevated NH₄⁺ concentrations following rain and/or wind events in May and July suggest episodic advection of sewage nitrogen to the offshore LK station. The Phase II study involved sampling of macroalgae for δ¹⁵N along a gradient from the Content Keys through Big Pine Key and offshore to LK in the summer wet season of 2000 and again in the drought of spring 2001. During the July 2000 sampling, macroalgae in nearshore waters around Big Pine Key had elevated δ¹⁵N values (~+4‰) characteristic of sewage enrichment; lower values (~+2‰) at LK were similar to values reported for macroalgae in upstream waters of western Florida Bay influenced by nitrogen-rich Everglades runoff. That pattern contrasted with the drought sampling in March 2001, when δ¹⁵N values of macroalgae were elevated (+6‰) to levels characteristic of sewage enrichment over a broad spatial scale from the Content Keys to LK. These results suggest that regional-scale agricultural runoff from the mainland Everglades watersheds as well as local sewage discharges from the Florida Keys are both significant nitrogen sources supporting eutrophication and algal blooms in seagrass and coral reef communities in the Lower Florida Keys. Hydrological and physical forcing mechanisms, including rainfall, water management on the South Florida mainland, wind, and tides, regulate the relative importance and variability of these anthropogenic nitrogen inputs over gradients extending to the offshore waters of the Florida Reef Tract.     

Exposure to degraded coral habitat depresses oxygen uptake rate during exercise of a juvenile reef fish

Coral Reefs - Coral reef ecosystems are currently under unprecedented stress due to anthropogenic induced climate change. Such stress causes coral habitats to degrade, which has been found to...