近交系小鼠过氧化氢酶-2遗传生化标记位点的研究

目的为了进一步完善近交系小鼠遗传生化标记检测方法,对近交系小鼠过氧化氢酶-2生化标记位点进行研究。方法将CBA/Ca与BALB/c交配得到杂交F1代动物,同时将CBA/Ca与C57BL/6交配得到杂交F1代动物,然后通过F1代动物之间的交配,以及F1代动物与母代的回交,得到F2代动物,对F2代动物进行过氧化氢酶-2生化标记检测。结果在杂交F1代不表现的过氧化氢酶-2的b型基因,在F2代出现。结论近交系小鼠过氧化氢酶-2遗传生化标记位点的等位基因a是完全显性的。     

近交系小鼠H-2基因的PCR检测方法

目的建立快速、灵敏、简便的H-2基因检测方法。方法针对近交系小鼠的H-2D区和H-2K区序列,设计两对特异性引物,分别进行DNA扩增,扩增产物通过聚丙烯酰胺凝胶电泳,确定H-2基因型。结果通过PCR反应扩增小鼠H-2D区和H-2K区的基因产物,可以区分不同的近交系小鼠的H-2基因型,进而可以区分出不同品系的近交系小鼠。结论利用分子生物学方法进行近交系小鼠遗传学检测,弥补了过去各种方法的不足,并且PCR方法还具备快速、简便、成本低廉、便于普遍推广并易于和国际接轨等优点。所以通过PCR方法可以进行小鼠H-2基因型检测。     

近交系小鼠线粒体DNA多态性的研究

目的　分析BALB/c等八个近交系小鼠线粒体DNA(mtDNA)的多态性 ,探讨近交系小鼠的遗传监测方法。方法　PCR -RFLP技术 ,即PCR技术结合限制性内切酶片段长度多态分析 (restrictionfragmentlengthPolymorphism ,RFLP)。结果　mtDNAD -Loop、tR NAIle GIN Met、ND3基因片段经HaeⅢ、HinfⅠ、EcoRV、HindⅢ、HpaⅠ、BamHⅠ、ApaⅠ、NdeⅡ、XhoⅠ、XbaⅠ、AluⅠ、RsaⅠ、StuⅠ、DraⅠ、AvaⅠ、HaeⅡ 16种内切酶分别消化后 ,BALB/c、C3H、C57BL/ 6J、T739、DBA/ 2、TA2、6 15、BALB/c -nu/nu等小鼠均表现出相同的酶切格局 ,未发现多态性。结论　BALB/c、C3H、C57BL/ 6J、T739、DBA/ 2、TA2、6 15、BALB/c -nu/nu等近交系小鼠遗传背景较为狭窄 ,不同品系小鼠间遗传背景的差异远远低于动物种属间的差异     

酶标探针在转基因植物检测中的应用

采用碱性磷酸酶标记DNA制备分子探针, 并首次在植物中应用。酶在苯醌作用下与单链DNA联结, 形成DNA和酶的共价复合物即酶标探针。此探针通过分子杂交与待测DNA结合, 再与酶的底物作用显色, 3～6h 内可观察结果。用此探针检测转基因植物中的UidA基因, 点杂交和Southern杂交结果表明, 所合成的酶标探针具有快速、准确、安全而经济的优点。点杂交证明外源UidA基因被成功转化到受体植物中, Southern 杂交对转基因的材料检测的结果证明, 该材料包含多个外源UidA基因拷贝, 初步确定其外源UidA基因拷贝数在5个以上。     

(GTG)5探针产生的DNA指纹图在近交系小鼠遗传检测中的应用

目的探讨用非放射性标记的寡聚核苷酸探针(GTG)5进行近交系小鼠的DNA指纹分析。方法用非放射性标记的寡聚核苷酸探针(GTG)5制作BALB/c、C57BL/6J、DBA/2、C3H近交系小鼠的DNA指纹图,对这四个品系的小鼠进行遗传检测,分析各品系内和品系间的遗传变异性。结果(GTG)5探针可产生具有良好多态性的DNA指纹图,平均图带数为8~12条。各品系内的DNA指纹图平均相似系数(-x)在0.96~1.00的范围内,具有相同指纹图的概率(P)均在3.1×10-1以上,极显著地高于品系间的相似系数(0.22~0.39)和相同指纹图的概率(P<1.07×10-4)。结论(GTG)5可用于制作近交系小鼠的DNA指纹图以对其进行遗传检测。     

近交系小鼠双色荧光正相杂交芯片技术体系的建立和优化

目的探讨采用单核苷酸多态性（SNP）检测方法-双色荧光正相杂交芯片技术对近交系小鼠遗传质量监测及相关影响因素。方法运用基于芯片的双色荧光正相杂交检测SNP技术,进行芯片杂交动力学研究,考察信号值（Cy3,Cy5）和ratio值（Cy5/Cy3）与PCR产物点样浓度、PCR产物长度和荧光标记探针长度之间的关系,研究PCR产物点样浓度、PCR产物长度和荧光标记探针长度对SNP分型的影响。结果采用正反标记实验后,Ratio值随着PCR产物点样浓度的增加呈稳定趋势;PCR双链产物长度对信号值影响比较大,点样时其长度不宜太长,最好不超过450 bp;随荧光标记探针长度的增加,基因分型能力明显下降,长度为15 bp最佳,长度超过20 bp时,已基本没有区分能力。结论PCR产物点样浓度、PCR产物长度和荧光标记探针长度是双色荧光正相杂交SNP分型系统的重要影响因素,采取适当的PCR产物点样浓度、PCR产物长度和荧光标记探针长度,并采用正反标记实验,可以取得稳定、准确的基因分型效果。为进一步进行近交系小鼠遗传质量监测的研究奠定基础。     

寡聚核苷酸探针在近交系小鼠遗传检测中的应用

用两个非放射性标记的寡聚核苷酸探针(GGAT)4和(GTG)5制作BALB/c、C57BL/6J、DBA/2、C3H等4种近交系小鼠的DNA指纹图,比较了两种探针在近交系小鼠遗传检测应用中的重复性和稳定性。结果表明,两种探针对上述4种近交系小鼠产生的DNA指纹图的图带数均为8～12条,具有良好的多态性。品系内的平均DNA指纹图相似系数(-x)在0·92～1·00的范围内,具有相同指纹图的概率(P)均在0·31以上,极显著地高于品系间的相似系数(0·22～0·39)和相同指纹图的概率(P<1·07×10-4)。说明(GGAT)4和(GTG)5两种寡聚核苷酸探针均可用于制作近交系小鼠的DNA指纹图,以对其进行遗传检测。用两种不同的探针进行DNA指纹分析,可以检出基因组中更多的个体特异性信息,结果更加可靠。     

小小卫星DNA阳性克隆的鉴定及DNA指纹分析

提取四种近交系小鼠的肝脏ＤＮＡ,分别用ＨｉｎｆＩ和Ｈａｅ　Ⅲ酶切。用３３．１５和本课题组克隆的小鼠小卫星阳性克隆ＤＮＡ片断作探针,用［α－３２Ｐ］ｄＣＴＰ随机引物标记,Ｓｏｕｔｈｅｒｎ杂交,获得了理想的小鼠ＤＮＡ指纹图谱。初步确定阳性克隆ＤＮＡ片断Ｖ２具有较好的多态性,可作为小鼠基因组小卫星探针,用于实验动物的遗传监测、基因连锁分析和小鼠遗传图谱的研究。     

转基因甘蔗植株Southern杂交体系的优化北大核心CSCD

对甘蔗Southern杂交体系的优化,旨为转基因甘蔗Southern杂交鉴定分析提供参考。以转基因甘蔗为材料,就探针不同标记方法的比较、甘蔗基因组DNA的提取、基因组DNA酶切量、酶切时间及杂交过程等方面,对地高辛标记的Southern杂交技术进行了优化研究。结果表明,改良的CTAB法提取的甘蔗DNA能满足后期实验的要求;PCR法标记探针的效率较随机引物法标记探针的效率高,更适合用于Southern杂交;40μg的DNA在400μL酶切体系中,酶切10 h可获得良好的酶切效果;杂交温度40℃,杂交18 h,可获得清晰的杂交条带。     

BALB/c小鼠遗传质量检测的新方法

目的比较随即扩增多态性方法（RAPD）、微卫星方法（STR）与生化标记方法对近交系小鼠遗传质量检测的差异,为近交系动物遗传质量控制提供一种分子生物学方法。方法提取近交系小鼠BALB/c基因组DNA,用6条RAPD引物和20对STR引物对其进行PCR扩增,用生化标记法检测13个位点。结果在6条RAPD引物中,引物2（p2）、引物3（p3）、引物5（p5）和引物6（p6）这四条引物扩增的条带出现差异,表现为不同的RAPD图谱;在20对STR引物中,引物2、4、10和11,这四对引物扩增的条带出现差异,表现为不同的STR图谱;13个生化标记位点中,过氧化氢酶-2（Ce-2）等6个生化位点发现杂合基因。结论RAPD和STR可用于验证生化标记方法的实验结果,并用于保证近交系动物的遗传质量。     

Polymorphism of Unique Noncoding DNA Sequences in Wild and Laboratory Mice

Two DNA probes, D17Tu1 and D17Tu2, were isolated from a genomic DNA library containing only two mouse chromosomes, one of which is chromosome 17, carrying the major histocompatibility complex (H-2), as well as the t complex genes. The D17Tu1 probe was mapped to the centromeric region of chromosome 17 and the D17Tu2 probe to the S region of the H-2 complex. Neither of the two probes appeared to detect any genes, but both contained unique, nonrepetitive sequences. Typing of DNA obtained from a large panel of mice revealed the presence of four D17Tu1 patterns in inbred mouse strains, one very common, one less common, and two present in one strain each. The two common patterns could not be detected in appreciable frequencies in the European wild mice tested (one of the two patterns was, however, found in Australian wild mice). Conversely, the patterns found frequently in European wild mice are absent in the laboratory mice. We therefore conclude that wild mice from the sampled regions of Europe could not have provided the ancestral stocks from which inbred strains were derived. Only one D17Tu1 pattern was found in all the populations of Mus musculus tested, while eight patterns were found in Mus domesticus, with virtually all the populations being polymorphic. We suggest that this difference reflects different modes in which the two species colonized Europe. The distribution of the D17Tu2 patterns in inbred strains correlates with the distribution of H-2 haplotypes.     

人巨细胞病毒的生物素DNA探针的制备和应用

本研究用克隆的HCMV AD169株DNA片段,制备了生物素标记的DNA探针,建立了检测临床脐带血、尿标本中HCMV DNA的核酸探针杂交方法。该探针可测出100pg同源DNA,不与人胚肺细胞、Hep-2细胞DNA以及其他疱疹病毒的DNA发生反应。用核酸杂交方法检测了30份脐带血标本,有11例阳性,阳性率为33％。10例孕妇尿标本中,3例阳性,阳性率为30％。检测结果表明：我们建立的生物素标记的HCMV DNA探针的点杂交法,具有高度的特异性、敏感性,比分离病毒法更迅速,可用于HCMV感染的临床标本的病毒核酸检测。     

Assignment of pancreatic ribonuclease gene to mouse chromosome 14

A pancreatic ribonuclease cDNA was used as a probe for Southern blot hybridization of genomic DNA from recombinant inbred strains of mice. The results indicated that the gene coding for pancreatic ribonuclease (Rib-1) can be assigned to mouse chromosome 14. Analysis of the congenic strain B10.D2(57N)Sn confirmed this assignment and indicated that Rib-1 is closely linked to the genes encoding the T-cell receptor alpha subunit (Tcra) and nucleoside phosphorylase-2 (Np-2).     

Spontaneous autocytotoxicity against an unexpected H-2 d haplotype in MRL/lpr (H-2 k) autoimmune disease-prone mice

The MRL/lpr (H-2 ^k) inbred strain, a model for the autoimmune disease systemic lupus erythematosus, differs from the healthy inbred strain MRL +/+ (H-2 ^k) by only 0.1 % of its genome. Southern blot analysis using class I and class II probes confirmed the H-2 ^k genotype of both strains. Among the Ia^k-positive peritoneal cells, cells with an unexpected expression of Ia^d specificities were detected in a radioimmunoassay using several monoclonal antibodies and one conventional antiserum. This was only found in aged (6- to 9-month-old) mice both in the MRL/lpr strain (32 % Ia^d-positive mice) and in the MRL +/+ strain (42% Ia^d-positive mice). Furthermore, 24% of aged MRL/lpr mice exhibited strong spontaneous cytotoxic T lymphocyte (CTL) activities against P815 (H-2 ^d) target cells, and 57% had a weaker but still detectable level of cytotoxicity. In contrast, such a CTL activity has never been found in the MRL +/+ strain. These results suggest that the anti-H-2^d d CTL plays a role in the onset of the autoimmune process in MRL/lpr mice.     

The Locus Encoding αa-Crystallin Is Closely Linked to H-2K on Mouse Chromosome 17

We have used a complementary DNA (cDNA) for mouse alpha A-crystallin to probe genomic DNA for restriction fragment length polymorphisms which could be used to map the alpha A-crystallin gene locus (Acry-1) in the mouse genome. Ten of 12 restriction endonucleases produced fragment polymorphism among various inbred strains of mice. A comprehensive strain survey conducted with six endonucleases resulted in the discovery of six allelic forms of Acry-1. Linkage analysis was conducted on DNA from three sets of recombinant inbred strains of mice and demonstrated close linkage of Acry-1 with the major histocompatibility complex (H-2) on chromosome 17. Analysis of congenic and recombinant congenic strains of mice confirmed the linkage of Acry-1 and H-2 and located the alpha A gene to the region between glyoxylase (Glo-1) and H-2K.     

Specific hybridization probes demonstrate fewer xenotropic than mink cell focus-forming murine leukemia virus env-related sequences in DNAs from inbred laboratory mice.

We have derived hybridization probes from analogous 100-base-pair segments located within the N-terminal region of gp70 coding sequences which differentiate xenotropic from mink cell focus-forming (MCF)-related murine leukemia virus (MuLV) DNAs. The MCF probe annealed to the integrated proviruses of all six MCF MuLV isolates tested; the xenotropic probe hybridized to the DNAs of all four xenotropic proviral isolates examined. No cross-hybridization was observed, and neither probe reacted with the env segments of amphotropic or ecotropic MuLV DNAs. Southern blot analysis of HindIII- or EcoRI-digested genomic DNAs from a variety of inbred laboratory mice demonstrated the presence of more MCF- than xenotropic MuLV-related segments in every strain tested.     

Pi30 DNA probe may be useful for the identification of Prevotella intermedia at the species or strain level

Recently, we introduced a new method for the rapid screening of bacterial species-or subspecies-specific DNA probes, named the "inverted dot blot hybridization screening method." This method has subsequently been then applied to develop species-or strain-specific DNA probes for Prevotella intermedia and Prevotella nigrescens. In a previous study, the inverted dot blot hybridization data showed that a probe, Pi30, was specific for P. intermedia. In this study, the DNA probe Pi30 was evaluated by Southern blot analysis to determine if it could distinguish P. intermedia from P. nigrescens. The data showed that the probe Pi30 reacted with the genomic DNAs from the reference strains and clinical isolates of both P. intermedia and P. nigrescens, but the size of the signal bands was different. In addition, the probe Pi30 reacted with a 1.4 kbp fragment from the genomic DNAs digested with Pst I of the P. intermedia strains but not with any fragments of P. nigrescens strains. The result indicates that the probe Pi30 could be useful for the identification of P. intermedia by restriction fragment length polymorphism (RFLP) at the species or strain level.     

Constitutive and IL 1-regulated murine complement gene expression is strain and tissue specific

To study the molecular mechanisms accounting for strain- and tissue-specific variations in the production of complement proteins, complementary DNA probes were used to assess qualitative and quantitative differences in specific mRNA content of complement proteins C2, factor B, and C3 in extracts of tissues (liver, lung, spleen, kidney, and peritoneal macrophages) isolated from various mouse strains. Northern blot analysis of total hepatic RNA revealed differences in C2, factor B, and C3 mRNA levels in strains that share B10 background but differ in the H-2 region (e.g., H-2k, H-2u, H-2d, H-2f). In each instance, hepatic mRNA specific for the individual gene product corresponded in amount to the serum levels. By contrast, specific mRNA content of C2 and factor B in macrophages differed significantly from those observed in liver for each strain. Modulation of C2, factor B, and C3 expression was studied after in vivo administration of recombinant IL 1 or endotoxin to H-2k (B10.AKM) or H-2u (B10.PL) strain mice. As assessed by Northern blot analysis, neither endotoxin nor IL 1 affected liver C2-specific mRNA but increased specific C2 mRNA levels in kidney and lung. For both strains, IL 1 increased specific factor B mRNA in all tissues examined except for the H-2u strain liver factor B mRNA content, which was not affected by IL 1, whereas that of H-2k mice was increased. The lack of factor B modulation by IL 1 in the H-2u lines was specific to that gene and not a reflection of a generalized IL 1 unresponsiveness. Differences in tissue and strain specific constitutive and IL 1-regulated expression of the C3 gene were also observed in the H-2u and H-2k strains.