Brief communication: Artificial cranial modification in Kow Swamp and Cohuna

The crania from Kow Swamp and Cohuna have been important for a number of debates in Australian paleoanthropology. These crania typically have long, flat foreheads that many workers have cited as evidence of genetic continuity with archaic Indonesian populations, particularly the Ngandong sample. Other scientists have alleged that at least some of the crania from Kow Swamp and the Cohuna skull have been altered through artificial modification, and that the flat foreheads possessed by these individuals are not phylogenetically informative. In this study, several Kow Swamp crania and Cohuna are compared to known modified and unmodified comparative samples. Canonical variates analyses and Mahalanobis distances are generated, and random expectation statistics are used to calculate statistical significance for these tests. The results of this study agree with prior work indicating that a portion of this sample shows evidence for artificial modification of the cranial vault. Many Kow Swamp crania and Cohuna display shape similarities with a population of known modified individuals from New Britain. Kow Swamp 1, 5, and Cohuna show the strongest evidence for modification, but other individuals from this sample also show evidence of culturally manipulated changes in cranial shape. This project provides added support for the argument that at least some Pleistocene Australian groups were practicing artificial cranial modification, and suggests that caution should be used when including these individuals in phylogenetic studies. Am J Phys Anthropol 155:173–178, 2014. © 2014 Wiley Periodicals, Inc.     

Extending the chronology of deposits at Blombos Cave, South Africa, back to 140 ka using optical dating of single and multiple grains of quartz

Optically stimulated luminescence (OSL) measurements are reported for both single aliquots (of two different sizes) and single grains of quartz from deposits within Blombos Cave. Ages have been obtained for six sediments from the Middle Stone Age (MSA) occupation levels and for two sterile sands, one underlying the archaeological sediment and one overlying the Later Stone Age occupation levels. The ages for the archaeological sediments were obtained from single-grain measurements that enabled unrepresentative grains to be rejected. The MSA occupation levels have ages that, within error limits, are in stratigraphic order and fall between the OSL age for the oldest dune sand (143.2+/-5.5 ka) and a previously published OSL age for the sterile sand ( approximately 70 ka) that separates the Middle and Later Stone Age deposits. The earliest MSA archaeological phase, M3, from where fragments of ochre were found as well as human teeth, is dated to 98.9+/-4.5 ka, coinciding with the sea-level high of oxygen isotope substage 5c. The cave then appears to be unoccupied until oxygen isotope substage 5a on the basis of four OSL ages for archaeological phase M2, ranging from 84.6+/-5.8 to 76.8+/-3.1 ka; these levels contained large hearths and bone tools. An age of 72.7+/-3.1 ka was obtained for the final MSA archaeological phase, M1, from which deliberately engraved ochre and shell beads were recovered along with bifacial stone points. We conclude that the periods of occupation were determined by changes in sea level, with abundant sources of seafood available in times of high sea level and with the cave being closed by the accumulation of large dunes during periods of low sea level, such as during oxygen isotope stages 4 and 6.     

Artificial cranial deformation in Kow Swamp 1 and 5: A response to

Recently, Curnoe (2007) tested the predictions of competing models of modern human origins using three crania from Australia: Kow Swamp 1 and 5 and Keilor. The Kow Swamp specimens have long been suspected of having been altered through artificial deformation of the skull. Though Curnoe (2007) provided assurances that no evidence of deformation is present in those specimens, the current study retests the hypothesis that these Australian specimens are artificially deformed. The Australian crania are compared to known deformed individuals from New Britian through canonical variates analysis, and the resulting Mahalanobis distances are examined for statistical significance with random expectation statistics. The results show that Kow Swamp 1 and 5 have strong shape similarities to known deformed individuals, and both crania are very different in shape from Keilor. Keilor is statistically significantly different in shape from both Kow Swamp specimens and all of the known deformed specimens. These findings cast doubt on Curnoe's (2007) conclusions of a shared Australian cranial morphology as well as the retention of an archaic suite of morphologies in the Australians.     

Are the Kow Swamp hominids “archaic”?

Initial reports of hominids recovered at Kow Swamp, in the Murray Valley of Victoria indicated that, on the basis of cranial analyses, there was a "survival of Homo erectus features in Australia until as recently as 10,000 years ago (Thorne and Macumber, 1972, p. 316). This claim was later refuted by others, who suggested that artificial cranial deformation may have been responsible for at least some of the distinctive and "primitive" traits seen in the Kow Swamp individuals. Previous research by this worker and others has indicated that taxonomic traits at both specific and subspecific levels are present in hominine femora. Therefore, it may be possible to evaluate the "primitiveness" of the Kow Swamp sample on the basis of their femoral anatomy. Morphometric analyses were undertaken, using as controls femora of Romano British, Tasmanian, and other Murray Valley populations. On the basis of bivariate and multivariate analyses it was found that, at least in this single element of the postcranium, no primitive features were present. The Kow Swamp sample, in fact, shows a very close morphometric relationship with all included Homo sapiens controls and is significantly distinct from Homo erectus.     

Single-grain OSL chronologies for Middle Palaeolithic deposits at El Mnasra and El Harhoura 2, Morocco: implications for Late Pleistocene human-environment interactions along the Atlantic coast of northwest Africa

Optically stimulated luminescence (OSL) measurements were made on individual, sand-sized grains of quartz from Middle Palaeolithic deposits at two cave sites (El Harhoura 2 and El Mnasra) on the Atlantic coast of Morocco. We were able to calculate OSL ages for 32 of the 33 samples collected from the Middle Palaeolithic deposits, including the earliest and latest Aterian levels at both sites. These ages reveal periods of occupation between about 110 and 95 ka (thousands of years ago), and at ∼75 ka. A late Middle Palaeolithic occupation of El Harhoura 2 is also recorded at ∼55 ka. Our single-grain OSL chronologies largely support previous age estimates from El Mnasra and other sites along the Atlantic coast of Morocco, but are generally more precise, reproducible and stratigraphically more coherent (i.e., fewer age reversals). We compare the single-grain ages for El Harhoura 2 and El Mnasra with those obtained from single- and multi-grain OSL dating of Middle Palaeolithic deposits in the nearby sites of Contrebandiers and Dar es-Soltan 1 and 2, and with records of past regional environments preserved in sediment cores collected from off the coast of northwest Africa. A conspicuous feature of the new chronologies is the close correspondence between the three identified episodes of human occupation and periods of wetter climate and expanded grassland habitat. Owing to the precision of the single-grain OSL ages, we are able to discern gaps in occupation during Marine Isotope Stages 5 and 4, which may represent drier periods with reduced vegetation cover. We propose that these climatic conditions can be correlated with events in the North Atlantic Ocean that exert a major control on abrupt, millennial-scale fluctuations between wet and dry periods in northwest and central North Africa.     

Human skeletal remains from Cossack,Western Australia

Human remains of a male individual from Cossack, northwestern Australia are described. Absolute dating is not possible but site geomorphology restricts the upper limit to 6500 B.P. Morphologically and metrically the skull differs from those of recent Western Australian male Aborigines, but it is very similar to that of Kow Swamp I and others included in the “robust” prehistoric Australian Aboriginal group (Thorne, 1977). The specimen is important as indicating the widespread nature and probable recency of a large, robust Australian Aboriginal population demonstrably different to recent populations.     

Optically stimulated luminescence dating of cave deposits at the Xiaogushan prehistoric site, northeastern China

The Xiaogushan cave site is one of the most important prehistoric sites in North China. The stone and bone artifacts found in the cave are similar to European contemporaneous artifacts. Cave deposits consist of five layers that have been dated from 46,353 ± 1179 to 4229 ± 135 cal. yr BP, using radiocarbon dating techniques on charcoal and bone samples collected from Layers 2-5. In this paper, optically stimulated luminescence (OSL) techniques were applied to date six samples taken from Layers 1-3. The luminescence properties of the fine-grained and coarse-grained quartz extracts indicate that the materials are suitable for OSL dating using a single-aliquot regeneration-dose (SAR) protocol. The OSL ages obtained are broadly consistent with the stratigraphy and the associated calibrated radiocarbon ages. The dating results show that the cave was first occupied by humans about 70 ka. The human occupation of the cave may be related to climate change. An occupation hiatus is inferred to between ∼17 to ∼10 ka. The stone and bone artifacts found in Layers 2 and 3 may indicate the Middle to Upper Paleolithic transitions in the region.     

An OSL chronology for the sedimentary deposits from Pinnacle Point Cave 13B--a punctuated presence

Optically stimulated luminescence (OSL) measurements are reported for single aliquots and single grains of quartz from sedimentary deposits within Cave 13B at Pinnacle Point, South Africa (PP13B). Ages have been obtained for 30 samples from the Middle Stone Age and from sterile geological deposits at the base and top of the sediment sequence. The ages for all the archaeological units have been obtained from single-grain measurements that enable unrepresentative grains to be rejected after they have been scrutinized for their OSL behavior. The shape of the equivalent dose distribution and the degree of spread in equivalent dose for each sample have also been scrutinized for evidence of depositional and post-depositional effects that can influence the accuracy of the age estimates. This study also used the same systematic approach as that used for the dating of the Howieson's Poort and Still Bay in South Africa. This single-grain approach results in more accurate and precise age estimates that place all ages measured and analyzed in this way on a common timescale. Four periods of human occupation have been dated to ~162ka, ~125ka, ~110ka, and ~99-91ka during Marine Isotope Stage (MIS) 6, 5e, 5d, and 5c, respectively. Occupation of the site appears to have occurred at periods of higher sea level and increased aeolian activity, and the cave was ultimately sealed by the accumulation of a large dune ~90ka ago that infilled the cave, but also blanketed the cliff face above the cave, thus preventing further habitation of the site until ~39ka.     

The Watinglo mandible: A second terminal Pleistocene Homo sapiens fossil from tropical Sahul with a test on existing models for the human settlement of the region

This paper analyses a fossil human mandible, dated to circa 10 ka, from Watinglo rockshelter on the north coast of Papua New Guinea. The fossil is metrically and morphologically similar to male mandibles of recent Melanesians and Australian Aborigines. It is distinguished from Kow Swamp and Coobool Creek male mandibles (Murray Valley, terminal Pleistocene) by being smaller and having different shape characteristics, as well as smaller teeth and a slower rate of tooth wear. It pairs with the Liang Lemdubu female (Late Glacial Maximum, Aru Islands) in suggesting that the morphology of the terminal Pleistocene inhabitants of tropical Sahul was gracile compared to their contemporaries within the southern Murray drainage. An explanatory scenario for this morphological contrast is developed in the context of the Homo sapiens early fossil record, Australasian mtDNA evidence, terminal Pleistocene climatic variation, and the possibility of multiple entry points into Sahul.     

Influence of late Quaternary climate change on present patterns of genetic variation in valley oak,Quercus lobata Née

Phylogeography and ecological niche models (ENMs) suggest that late Quaternary glacial cycles have played a prominent role in shaping present population genetic structure and diversity, but have not applied quantitative methods to dissect the relative contribution of past and present climate vs. other forces. We integrate multilocus phylogeography, climate‐based ENMs and multivariate statistical approaches to infer the effects of late Quaternary climate change on contemporary genetic variation of valley oak (Quercus lobata Née). ENMs indicated that valley oak maintained a stable distribution with local migration from the last interglacial period (~120 ka) to the Last Glacial Maximum (~21 ka, LGM) to the present compared with large‐scale range shifts for an eastern North American white oak (Quercus alba L.). Coast Range and Sierra Nevada foothill populations diverged in the late Pleistocene before the LGM [104 ka (28–1622)] and have occupied somewhat distinct climate niches, according to ENMs and coalescent analyses of divergence time. In accordance with neutral expectations for stable populations, nuclear microsatellite diversity positively correlated with niche stability from the LGM to present. Most strikingly, nuclear and chloroplast microsatellite variation significantly correlated with LGM climate, even after controlling for associations with geographic location and present climate using partial redundancy analyses. Variance partitioning showed that LGM climate uniquely explains a similar proportion of genetic variance as present climate (16% vs. 11–18%), and together, past and present climate explains more than geography (19%). Climate can influence local expansion–contraction dynamics, flowering phenology and thus gene flow, and/or impose selective pressures. These results highlight the lingering effect of past climate on genetic variation in species with stable distributions.     

Effects of Quaternary climatic fluctuations on the distribution of Neotropical savanna tree species

In order to develop niche models for tree species characteristic of the cerrado vegetation (woody savannas) of central South America, and to hindcast their distributions during the Last Glacial Maximum and Last Inter‐Glacial, we compiled a dataset of tree species checklists for typical cerrado vegetation (n = 282) and other geographically co‐occurring vegetation types, e.g. seasonally dry tropical forest (n = 355). We then performed an indicator species analysis to select ten species that best characterize typical cerrado vegetation and developed niche models for them using the Maxent algorithm. We used these models to assess the probability of occurrence of each species across South America at the following time slices: Current (0 ka pre‐industrial), Holocene (6 ka BP), Last Glacial Maximum (LGM – 21 ka BP), and Last Interglacial (LIG – 130 ka BP). The niche models were robust for all species and showed the highest probability of occurrence in the core area of the Cerrado Domain. The palaeomodels suggested changes in the distributions of cerrado tree species throughout the Quaternary, with expansion during the LIG into the adjacent Amazonian and Atlantic moist forests, as well as connections with other South American savannas. The LGM models suggested a retraction of cerrado vegetation to inter‐tableland depressions and slopes of the Central Brazilian Highlands. Contrary to previous hypotheses, such as the Pleistocene refuge theory, we found that the widest expansion of cerrado tree species seems to have occurred during the LIG, most probably due to its warmer climate. On the other hand, the postulated retractions during the LGM were likely related to both decreased precipitation and temperature. These results are congruent with palynological and phylogeographic studies in the Cerrado Domain.     

ESR dating of the Die Kelders Cave 1 site, South Africa

ESR measurements were made on ten enamel subsamples from six teeth recovered in layers 4-5, 6, 10, and 12 in the site of Die Kelders Cave 1, South Africa. The teeth (enamel and dentine) contained significant concentrations of uranium and therefore the U uptake model has a large influence on the computed ages. Variations in moisture content in the sediment had a smaller effect on the dose rate and calculated ages. For any given model of U uptake and moisture content, all the teeth gave very similar ages, implying that the entire deposit was formed over a short interval (<10,000 y). Comparison with OSL ages for the sediments suggests that the teeth experienced early U uptake, in which case the average age of the deposit is 70+/-4 ka (assuming a moisture content of 10%). Agreement between replicate subsamples was excellent.     

Modern human origins in Australasia: testing the predictions of competing models.

The evolutionary background to the emergence of modern humans remains controversial. Four models have been proposed to explain this process and each has clearly definable and testable predictions about the geographical origins of early Australians and their possible biological interaction with other Pleistocene populations. The present study considers the phenetic affinities of early Australians from Kow Swamp (KS 1 and KS 5) and Keilor to Pleistocene Africans and Asians from calvarial dimensions. The study includes analyses employing log-transformed and size-corrected (Mosimann variables) data. The strongest signals to emerge are as follows: (1) a phenetic pattern in which Australians are most like each other, (2) all three crania possess a mosaic of archaic and modern features, (3) Kow Swamp crania also show strong affinities to archaic remains, (4) Keilor is more modern than KS 1 and KS 5 and (5) Keilor shows affinities to Pleistocene East Asian modern crania (Liujiang and Upper Cave 101) providing evidence for a broad regional morphology. The results refute the predictions of multi-species replacement models for early Australians but are consistent with single-species models. Combined with published evidence from DNA, the present study indicates that the Assimilation model presently offers the best explanation for the origins of Pleistocene Australians.     

Last Interglacial fossil elephant trackways dated by OSL/AAR in coastal aeolianites,Still Bay,South Africa

The impressive Pleistocene coastal aeolianite exposures in sea cliffs east of Still Bay on the west–southern coast of South Africa host a rich archive of fossil mammalian trackways, including the African elephant (Loxodonta africana). Neither the ichnofossils nor their host sediments have been described in any detail and chronologies remained uncertain. This paper presents a new optically stimulated luminescence (OSL) and amino acid racemisation (AAR) chronology (the first joint application of OSL/AAR dating in South Africa). This provides a temporal framework for assessing the palaeoenvironmental significance of dune sedimentation patterns, pedogenesis and ichnology.The Pleistocene aeolianite exposures at Still Bay represent the recently eroded remnants of a dune cordon, mainly built by coalesced parabolic dune systems. Sedimentary facies are dominated by large-scale planar cross-stratification formed by foreset progradation in the nose and trailing arms of the dunes and low-angle bedding, chiefly representing sedimentation in low relief interdune terrain. The main dune building wind regime was westerly, associated with cyclonic polar frontal systems (as at the present time). The OSL and AAR dating demonstrate ages ranging from MIS 5e to 5b and termination of Pleistocene aeolian sedimentation at ～ 90 ka. The Pleistocene aeolianite is separated from the overlying Holocene dunes (dated to ～ 8 ka), by a major hiatus recorded by a horizon of intense pedogenesis.Elephant footprints were seen in profile, as casts on the underside of beds and as natural impressions. The taphonomic processes controlling the morphology and preservation of these unique ichnofossils were found to be complex. The presence of Loxodonta africana at Still Bay represents the southernmost occurrence of this species recorded to date and possibly, a closer proximity of woodland during MIS 5. This and other observations may indicate a higher moisture regime than at present. There is no available evidence that the elephants were predated by contemporary Middle Stone Age people.     

New High Resolution Pollen Records from Two Lakes in Xizang (Tibet)

Studies on the pollen from cores of Lake Hidden (29~48.77' N, 92~22.37' E) and Ren Co (30%3.97'N, 96~40.97'E) in Southeast Xizang (Tibet) showed climatic changes and the evolution of vegetation since the last Glacial Maximum (LGM). Before 16 ka BP pollen assemblages were dominated by Chenopodiaceae (20% -50% ) and Artemidis (10% ~ 30% ) and pollen influx values were very low from Lake Ren Co in Basu county. The vegetation around the lake was probably a desert-steppe during the LGM. The data also suggest that the climate in the Basu area was cold and dry during the LGM and the last glacial time. The mean annual temperature was probably 4 ~ 6 ℃ colder than the present, and the mean annual precipitation was only 250 mm, about 40% of the present. The Southwest monsoon became stronger from 12 ka BP to 6 ka BP reaching its acme by 7 ka BP, but weakened gradually from 5 ka BP to the present. The paleovegetation was dominantly forest or forest-meadow around Lake Hidden and Ren Co during the 9.2 ~ 5 ka BP. The mean temperature in January was probably 2 ~ 3 ℃ higher than the present, and the mean annual precipitation was 100 mm more than the present. The timing of vegetational and climatic changes based on pollen records generally supports the results of global climatic-model experiments that predict a strengthened monsoon system during the early to middle Holocene followed by a weakened monsoon system.     

Artificial cranial deformation and fossil Australians revisited

Based on cranial characters shared by Homo erectus in Java and Homo sapiens in Australia, Australasia is widely considered the strongest case for a regional origin of modern humans. However, artificial vault deformation has been suggested to be the cause of "archaic" characters such as frontal recession in key fossil Australian crania. We use log-log plots of cranial arc versus chord measurements and we score nonmetric traits often thought to be associated with artificial deformation to make systematic comparisons across groups and deformation types to identify universal consequences of artificial deformation. Based on our large comparative sample (n = 588) apparatus-deformed crania have flatter frontals and occipitals and usually more angulated parietals in the sagittal plane than undeformed crania, regardless of deformation type. Fossil Australian samples exhibit evidence of both undeformed and deformed individuals. The sample from Coobool Creek provides evidence that undeformed individuals had more rounded frontals than recent Australians. However, many individuals from Coobool Creek, Kow Swamp, and Nacurrie exhibit modification of one or more cranial contours. The Kow Swamp individuals in particular plot with deformed crania from all regions. In addition, the frequency of hyperostotic traits such as bregmatic eminence, metopic and sagittal keels in H. sapiens is influenced by both artificial deformation and pathological hypervascularity/hyperostosis. Thus it is unwise to use cranial contours and these nonmetric traits to infer genetic relatedness between Fossil Australians and Indonesian H. erectus.     

Quaternary Ice-Age dynamics in the Colombian Andes: developing an understanding of our legacy

Pollen records from lacustrine sediments of deep basins in the Colombian Andes provide records of vegetation history, the development of the floristic composition of biomes, and climate variation with increasing temporal resolution. Local differences in the altitudinal distribution of present-day vegetation belts in four Colombian Cordilleras are presented. Operating mechanisms during Quaternary Ice-Age cycles that stimulated speciation are discussed by considering endemism in the asteraceous genera Espeletia, Espeletiopsis and Coespeletia. The floristically diverse lower montane forest belt (1000-2300 m) was compressed by ca. 55% during the last glacial maximum (LGM) (20 ka), and occupied the slopes between 800 m and 1400 m during that period. Under low LGM atmospheric pCO2 values, C4-dominated vegetation, now occurring below 2200 m, expanded up to ca. 3500 m. Present-day C3-dominated paramo vegetation is therefore not an analogue for past C4-dominated vegetation (with abundant Sporobolus lasiophyllus). Quercus immigrated into Colombia 478 ka and formed an extensive zonal forest from 330 ka when former Podocarpus-dominated forest was replaced by zonal forest with Quercus and Weinmannia. During the last glacial cycle the ecological tolerance of Quercus may have increased. In the ecotone forests Quercus was rapidly and massively replaced by Polylepis between 45 and 30 ka illustrating complex forest dynamics in the tropical Andes.     

Satsurblia: New Insights of Human Response and Survival across the Last Glacial Maximum in the Southern Caucasus

The region of western Georgia (Imereti) has been a major geographic corridor for human migrations during the Middle and Upper Palaeolithic (MP/UP). Knowledge of the MP and UP in this region, however, stems mostly from a small number of recent excavations at the sites of Ortvale Klde, Dzudzuana, Bondi, and Kotias Klde. These provide an absolute chronology for the Late MP and MP–UP transition, but only a partial perspective on the nature and timing of UP occupations, and limited data on how human groups in this region responded to the harsh climatic oscillations between 37,000–11,500 years before present. Here we report new UP archaeological sequences from fieldwork in Satsurblia cavein the same region. A series of living surfaces with combustion features, faunal remains, stone and bone tools, and ornaments provide new information about human occupations in this region (a) prior to the Last Glacial Maximum (LGM) at 25.5–24.4 ka cal. BP and (b) after the LGM at 17.9–16.2 ka cal. BP. The latter provides new evidence in the southern Caucasus for human occupation immediately after the LGM. The results of the campaigns in Satsurblia and Dzudzuana suggest that at present the most plausible scenario is one of a hiatus in the occupation of this region during the LGM (between 24.4–17.9 ka cal. BP). Analysis of the living surfaces at Satsurblia offers information about human activities such as the production and utilisation of lithics and bone tools, butchering, cooking and consumption of meat and wild cereals, the utilisation of fibers, and the use of certain woods. Microfaunal and palynological analyses point to fluctuations in the climate with consequent shifts in vegetation and the faunal spectrum not only before and after the LGM, but also during the two millennia following the end of the LGM.     

Prokaryotes in the WAIS Divide ice core reflect source and transport changes between Last Glacial Maximum and the early Holocene

We present the first long‐term, highly resolved prokaryotic cell concentration record obtained from a polar ice core. This record, obtained from the West Antarctic Ice Sheet (WAIS) Divide (WD) ice core, spanned from the Last Glacial Maximum (LGM) to the early Holocene (EH) and showed distinct fluctuations in prokaryotic cell concentration coincident with major climatic states. The time series also revealed a ~1,500‐year periodicity with greater amplitude during the Last Deglaciation (LDG). Higher prokaryotic cell concentration and lower variability occurred during the LGM and EH than during the LDG. A sevenfold decrease in prokaryotic cell concentration coincided with the LGM/LDG transition and the global 19 ka meltwater pulse. Statistical models revealed significant relationships between the prokaryotic cell record and tracers of both marine (sea‐salt sodium [ssNa]) and burning emissions (black carbon [BC]). Collectively, these models, together with visual observations and methanosulfidic acid (MSA) measurements, indicated that the temporal variability in concentration of airborne prokaryotic cells reflected changes in marine/sea‐ice regional environments of the WAIS. Our data revealed that variations in source and transport were the most likely processes producing the significant temporal variations in WD prokaryotic cell concentrations. This record provided strong evidence that airborne prokaryotic cell deposition differed during the LGM, LDG, and EH, and that these changes in cell densities could be explained by different environmental conditions during each of these climatic periods. Our observations provide the first ice‐core time series evidence for a prokaryotic response to long‐term climatic and environmental processes.     

Combining ecological niche modelling and morphology to assess the range‐wide population genetic structure of bobcats (Lynx rufus)

Despite a broad distribution, general habitat requirements, and a large dispersal potential, bobcats (Lynx rufus) exhibit a genetic division that longitudinally transects central North America. We investigated (1) whether the climate of the Last Glacial Maximum (LGM; 21 kya) isolated bobcats into refugia and also whether the current climate influences gene flow between the segregate populations and (2) whether the geographical patterns in cranial morphology reflect population identity. We created ecological niche models (ENMs) to evaluate climatic suitability and to estimate distributions of the disparate populations under both historical (LGM) and contemporary conditions. We used two‐dimensional geometric morphometric methods to evaluate variations in the cranium and mandible. These variations were then regressed across geographical variables to assess morphological differences throughout the range of the bobcat. ENMs projected onto LGM climate provided evidence of refugia during the LGM via increased suitability in the north‐west and south‐east portions of this species' range. Contemporarily, our models suggest that the Great Plains may be restricting bobcat migration and gene flow, effectively maintaining disparate populations. Morphological analyses identified a significant linear trend in shape variation across latitudinal and longitudinal gradients rather than distinct morphological divergence between lineages. Similar shape variations, however, did converge in approximate locations of assumed refugia. The findings of the present study provide a robust assessment of the biogeographical considerations for the population genetic structure of bobcats.