白沙蒿不同地理种群遗传分化的ISSR分析

运用ISSR技术,对白沙蒿的5个种群进行遗传分化的分析。12个引物在108个个体中共扩增出222个位点,其中,多态位点为218个,多态位点百分率为98.20%,Shannon多样性指数为0.315 4,具有高的多态性。种群间的遗传分化系数（G_st）为0.076 7,与AMOVA分析的结果一致（Ф_st为7.96%）,表明绝大多数的遗传变异存在于种群内部。各种群间遗传一致度高达98%以上,遗传距离很小,基因流达3.008 2,均表现出白沙蒿各种群存在着广泛的基因交流,有着很小的遗传分化。     

冷蒿种群在放牧干扰下遗传多样性的变化

通过随机扩增多态性 DNA(RAPD)方法检测了放牧干扰下冷蒿种群遗传多样性的变化。 17条 (组 )引物进行 RAPD分析 ,扩增共产生 2 5 4条带 ,其中 2 4 0条为多态性带 ,多态位点百分率达 94 .4 9%。随着放牧强度的增加 ,冷蒿种群多态位点百分数 ,Nei遗传多样性指数、Shannon信息指数均下降 ,种群内个体平均遗传一致度增加。放牧梯度上 4个冷蒿种群 H t=0 .2 116 ,Hs=0 .170 0 ,Dst=0 .0 4 16 ,种群间基因分化系数 Gst=0 .196 5 ,基因流 N*m=2 .0 4 5 1;同时随着放牧强度的增加 ,种群间的 Dst、Gst增加 ,N*m 降低。说明放牧限制了种群间的基因交流 ,使种群发生遗传分化。放牧梯度上的 4个冷蒿种群的遗传距离很小 ,但是随着放牧强度的增加 ,遗传距离在缓慢的增加 ,种群间的遗传一致度降低。根据遗传距离所构建的 U PGMA聚类图中冷蒿 4个种群随着牧压的增加 ,逐级聚在一起。这表明冷蒿种群的遗传分化与放牧强度的关系     

Study on genetic diversity of mangrove plant Aegiceras corniculatum populations in Guangxi

采用RAPD-PCR方法探讨广西3个不同生境下桐花树种群的遗传多样性和遗传分化.结果表明:3个不同生境桐花树RAPD扩增多态百分率为20.2%,3个不同生境桐花树种群两两之间的遗传距离分别为0.195、0.169、0.26,平均遗传距离为0.208.同一种群不同个体的扩增多态百分率最高为37.28%,其次为20.93%,最小的为19.32%.Shannon's遗传多样性指数3个种群分别为0.331、0.225和0.17,其大小顺序与多态百分率的结果一致.种群内遗传多样性比率为62.3%,种群间遗传多样性比率为37.7%.说明广西3个不同生境的桐花树种群的遗传变异大部分存在种群内,种群间遗传变异较小.     

枫香自然种群遗传多样性的ISSR分析

利用ISSR分子标记技术,对浙江省内枫香自然种群的遗传多样性进行分析。用10个引物对5个枫香种群共100个个体的样品DNA进行扩增,共测得135个位点,其中多态位点为118个,多态位点百分率(P)为87.41%,Shannon指数(I)为0.4646,Nei指数(h)为0.3122,表明枫香总体水平的遗传多样性较高。各种群的多态位点百分率平均为59.11%,Shannon指数平均为0.3660,Nei指数平均为0.2543。P、I、h均显示北山种群最高,天台山种群最低。AMOVA分子差异分析显示:85.49%的变异存在于种群内,14.51%存在于种群间,基因分化系数(Gst)为0.1856,种群间的遗传分化程度较低。种群间的基因流(Nm)为2.1944。5个种群间的平均遗传距离为0.1199。利用UPGMA法对5个种群进行聚类分析,结果分为两大类群:白云山、天台山、北山和安岱后4个种群组成一大类群;大明山种群单独为另一类群。     

不同海拔高度木荷种群遗传多样性的ISSR分析

利用ISSR分子标记技术分析了浙江天台山不同海拔高度木荷种群的遗传多样性和遗传分化.用12个引物对4个木荷种群共80个样品进行扩增,共检测到170个位点,其中多态位点154个,多态位点百分率(P)为90.59%.木荷总的Shannon信息指数(I)为0.5033,Nei指数(h)为0.3408,表明种水平的遗传多样性较高.而种群水平的遗传多样性比种水平低,P平均为63.68%,I平均为0.3789,h平均为0.2608.AMOVA分子差异分析表明,在总的遗传变异中,29.56%的变异存在于种群间,70.44%的变异存在于种群内,种群间的基因分化系数(Gst)为0.2348.木荷种群间的基因流为1.6293,4个种群间的平均遗传距离为0.1500.     

广西红树植物桐花树种群遗传多样性分析

采用RAPD-PCR方法探讨广西3个不同生境下桐花树种群的遗传多样性和遗传分化。结果表明:3个不同生境桐花树RAPD扩增多态百分率为20.2%,3个不同生境桐花树种群两两之间的遗传距离分别为0.195、0.169、0.26,平均遗传距离为0.208。同一种群不同个体的扩增多态百分率最高为37.28%,其次为20.93%,最小的为19.32%。Shannon’s遗传多样性指数3个种群分别为0.331、0.225和0.17,其大小顺序与多态百分率的结果一致。种群内遗传多样性比率为62.3%,种群间遗传多样性比率为37.7%。说明广西3个不同生境的桐花树种群的遗传变异大部分存在种群内,种群间遗传变异较小。     

日本稻蝗部分种群遗传多样性研究

采用随机引物扩增多态性分析方法,研究我国长江以南地理距离跨度较大的6个不同种群日本稻蝗Oxya japonica的种群遗传学关系.10条随机引物对57个日本稻蝗个体共扩增出131个片段,其中多态性位点为128个,总的多态位点百分率是97.7%.种群问的遗传分化系数表明:日本稻蝗的遗传变异大部分存在于种群内.Nei's遗传距离显示:日本稻蝗种群问的遗传距离存在较大差异,河北平山种群和云南种群遗传距离最大,为0.1715,广东广州种群和广西南宁种群遗传距离最小,为0.0770.聚类结果分析表明,地理上相距较近的种群优先相聚,遗传距离、地理距离和亲缘关系间呈现出一定的相关趋势.     

美国白蛾种群遗传分化的RAPD分析

应用随机扩增多态性DNA(RAPD)技术,对9个不同地理种群美国白蛾进行了遗传多样性和UPMGA聚类分析.结果表明:25个RAPD引物共扩增191个位点,片段大小在200～2000 bp,其中158个是多态位点,多态百分率为82.72%,遗传距离指数在0.2043～0.5108,遗传相似性系数在0.4892～0.7957;9个不同地理种群的美国白蛾可以分成3类:辽宁省和山东类群、北京和天津类群、美国类群,表明美国白蛾不同地理种群间的遗传分化与地理位置相关.     

引进天敌莲草直胸跳甲的遗传多样性

我国从美国引进天敌昆虫莲草直胸跳甲防治喜旱莲子草已有20多年历史.本研究采用随机引物扩增多态性DNA(RAPD)分析方法,对引入我国的4个莲草直胸跳甲地理种群(广州、重庆、昆明、福州)的遗传多样性情况进行分析,并以美国佛罗里达种群为参照,从分子水平上揭示其种群的遗传分化及其与环境之间的关系.从111条随机引物中选取13条条带清晰、重复性好的引物对5个种群的25个样本进行扩增.结果表明:总多态位点百分率为42.0％,其中美国佛罗里达种群的多态位点百分率显著高于我国的4个地理种群;25.5％遗传分化发生在4个群体间;对各地理种群间的遗传距离采用非加权配对算术平均法( UPGMA)进行聚类分析发现,遗传距离与种群空间分布距离呈正相关.     

东南石栎种群在演替系列群落中的遗传多样性

在浙江省天台山,利用RAPD技术对东南石栎种群演替系列群落针叶林、针阔混交林、常绿阔叶林中的遗传多样性和遗传分化进行了研究。结果表明,12个随机引物在60株个体中共检测到173个可重复位点,其中多态位点152个,总多态位点百分率为87.86%,3个种群平均多态位点百分率为65.32%。采用Shannon信息指数计算的3个种群总的遗传多样性为0.4529,平均为0.3458。采用Nei指数计算的3个种群总的基因多样性为0.3004,平均为0.2320。3个种群的多态位点百分率、Shannon信息指数、Nei指数大小顺序均为针叶林种群>针阔混交林种群>常绿阔叶林种群。AMOVA分子变异显示,72.85%变异来源于种群内,27.15%变异来源于种群间。种群间的遗传分化系数为0.2277,基因流为1.6949。东南石栎这种遗传结构是其本身生物学特性的反映,同时也与群落的微环境密切相关。3个东南石栎种群间的遗传相似度平均为0.8662,遗传距离平均为0.1442。针阔混交林种群与常绿阔叶林种群的遗传相似度最高,常绿阔叶林种群与针叶林种群最低。根据Nei的遗传距离对不同种群进行非加权成组配对法(UPGMA)聚类表明,针阔混交林种群与常绿阔叶林种群先聚合,再与针叶林种群聚在一起。     

Monitoring sandy desertification of Otindag Sandy Land based on multi-date remote sensing images

Sandy desertification is now the main ecological problem in the Otindag Sandy Land. In order to reveal the process of land degradation, especially the latest situation of sandy desertification, a method integrating remote sensing, Geographic Information System (GIS) and field survey was employed to build a sandy desertification dataset for analysis. Remote sensing images included the Landsat Thematic Mapper (TM) image in 1987, the Enhanced Thematic Mapper Plus (ETM⁺) image in 2000, and the image with the Charge-Coupled Device Camera (CCD) on the China-Brazil Earth Resources Satellite (CBERS) in 2006. Five land-cover classes, including active sand dunes, fixed sand dunes, semi-fixed sand dunes, inter-dune grassland and wetlands, were identified. Results showed that the Otindag Sandy Land has been suffering sandy desertification since 1987 with 2 different desertified stages. The first stage from 1987 to 2000 was a severe sandy desertification period, characterized by the fixed sand dunes decreasing at a high speed, and the semi-fixed and active sand dunes increasing remarkably. The second stage spanned from 2000 to 2006 and the sandy desertification was weakened greatly. Although a large area of fixed sand dunes were transformed to other types, fixed sand dunes were still the dominant type in the Ointdag region at 2006. Spatial change detection based on active sand dunes showed that the expansion area was much larger than the reversion area in the past two decades, and that several active sand belts had been formed, suggesting that sandy desertification controlling of the Otindag Sandy Land will be a long-term task.     

Monitoring sandy desertification of Otindag Sandy Land based on multi-date remote sensing images

Sandy desertification is now the main ecological problem in the Otindag Sandy Land. In order to reveal the process of land degradation, especially the latest situation of sandy desertification, a method integrating remote sensing, Geographic Information System (GIS) and field survey was employed to build a sandy desertification dataset for analysis. Remote sensing images included the Landsat Thematic Mapper (TM) image in 1987, the Enhanced Thematic Mapper Plus (ETM⁺) image in 2000, and the image with the Charge-Coupled Device Camera (CCD) on the China-Brazil Earth Resources Satellite (CBERS) in 2006. Five land-cover classes, including active sand dunes, fixed sand dunes, semi-fixed sand dunes, inter-dune grassland and wetlands, were identified. Results showed that the Otindag Sandy Land has been suffering sandy desertification since 1987 with 2 different desertified stages. The first stage from 1987 to 2000 was a severe sandy desertification period, characterized by the fixed sand dunes decreasing at a high speed, and the semi-fixed and active sand dunes increasing remarkably. The second stage spanned from 2000 to 2006 and the sandy desertification was weakened greatly. Although a large area of fixed sand dunes were transformed to other types, fixed sand dunes were still the dominant type in the Ointdag region at 2006. Spatial change detection based on active sand dunes showed that the expansion area was much larger than the reversion area in the past two decades, and that several active sand belts had been formed, suggesting that sandy desertification controlling of the Otindag Sandy Land will be a long-term task.     

基于多时相遥感影像的浑善达克沙地沙漠化监测

沙漠化是浑善达克沙地面临的主要环境问题.为了揭示该地区沙漠化过程,特别是其最新状态,利用1987年和2000年的Landsat TM/ETM 及2006年的中巴资源卫星CCD数据,在地面考察资料及地理信息系统(GIS)的支持下,提取了固定沙地、半固定沙地、流动沙地、丘间草原及湿地5种地表覆被类型,建立了浑善达克沙地沙漠化数据库.结果表明浑善达克沙地在过去20a里发生了沙漠化,但是可分为两个阶段.第一阶段从1987年到2000年,为沙漠化快速发展期,固定沙地面积显著减少,而半固定沙地和流动沙地则明显增加;第二阶段从2000年到2006年,为沙漠化缓减期.尽管发生了沙漠化,但固定沙地仍然是浑善达克沙地面积最大的类型.针对流动沙地的空间变化检测表明在过去20a里沙地恶化的面积远远大于逆转的面积,并且已经形成了几条流动沙带,这意味着浑善达克沙地沙漠化的遏制是一个长期的过程.     

中国蒿属沙生地理替代种亲缘关系的RAPD分析

运用随机扩增多态性DNA技术对中国蒿属沙生地理替代种共23个地理种群的遗传差异进行了检测,15个引物共获得303个位点。根据遗传距离的聚类分析结果显示：每个种的不同种群均各自聚到一起,反映出种间存在着一定的遗传分化。23个种群被分为三大支,白沙蒿与准噶尔沙蒿为一支,表明两者有着很近的亲缘关系。黑沙蒿、褐沙蒿、差不嘎蒿聚为一支,且遗传距离很小,反映出三个种有着最近的亲缘关系,乌丹蒿则自成一支,与其它种亲缘关系较远。结合形态与分布,提出褐沙蒿应作为黑沙蒿的地理亚种。     

中国内蒙古鄂伦春族线粒体DNA高变区Ⅰ和高变区Ⅱ遗传多态性

收集50份鄂伦春族无关人群外周血样本, 用ABI PRISM377测序仪对其mtDNA HVRⅠ和HVRⅡ进行测序, 计算多态性位点数、单倍型数目、单倍型频率、平均核苷酸差异数目等多态性指标; 结合已发表的其他民族mtDNA遗传资料, 根据Nei法计算鄂伦春族与各群体之间的遗传距离, 进行聚类分析, 绘制系统发生树。鄂伦春族群体mtDNA两个高变区与CRS序列比对, 分别发现52和24个多态性位点, 分别界定了38和27种单倍型, 单倍型多态性分别为0.964±0.018和0.929±0.019; 平均核苷酸差异分别为7.379和2.408; 用HVRⅠ序列多态性数据计算Fst和dA两种遗传距离, 相关系数r为0.993(P<0.01); 基于HVRⅠ序列的系统树显示鄂伦春族与中国台湾、南方汉族和中国香港人群遗传距离较近, 与北方汉族、蒙古族及其国外人群遗传距离相对较远。我国鄂伦春族人群mtDNA具有相对独特的遗传特征, 其遗传多态性和个体识别力较高, 可用于民族起源、迁徙、法医学个体识别等领域研究。     

放牧方式对浑善达克沙地榆树疏林退化的影响

浑善达克沙地榆树疏林是分布于草原地带的隐域植被类型,相较周边的典型草原区,其植被更加茂密,乔灌丛生,水草丰美,千百年来一直是牧民的优质冬季牧场。近半个世纪以来,因人类的过度开垦以及不合理的放牧管理,浑善达克沙地植被遭到空前的破坏,沙丘活化,载畜能力降低,生态价值和经济价值严重受损。近年来,随着国家草畜平衡以及禁牧政策的推广落实,放牧的牲畜总量得到一定程度的遏制,然而大面积草场还在继续退化。在牧民对生产生活的基本需求下,牲畜总量不可能无限制的压制。另外,适度的放牧对草原生态系统健康是有益的。因此,如何改良放牧方式,合理利用草场,在保持生态良好的基础上合理发挥草场的畜牧价值,是我们亟待探索的问题。以浑善达克沙地的典型天然植被榆树疏林为例,对不同放牧方式下的植被进行调查,基于沙地特殊的基质和植被特征,探讨适合沙地的放牧利用方式。研究表明,在相似的放牧强度下,把沙地作为冬营地,其榆树种群更新正常,植被覆盖度以及植物种类等均能保持良好,而把沙地作为夏季营地,榆树疏林植被退化严重,具体表现为:(1)榆树种群自然更新受阻;(2)灌木群落大量死亡或消失;(3)草本覆盖度显著降低,植物种类减少,多年生草本比例减少,一、二年生草本比例增加;(4)裸沙面积增加,沙丘趋于活化。本研究认为目前沙地植被的退化主要由不合理的放牧引起,并非气候因素所致。沙地适合于冬季放牧而不适合其他季节放牧。借鉴牧民的传统放牧方式,建议配合周边的典型草原区实行季节性倒场放牧,仅将沙地作为冬季营地使用,既能有效保护沙地植被又能充分发挥其畜牧价值。     

不同演替阶段臭柏种群的遗传多样性

为了阐明分子变异与演替阶段或生态过渡带的联系,应用随机扩增多态性DNA (random amplified polymorphic DNA, RAPD) 标记方法对毛乌素沙地图克境内4个不同演替阶段的臭柏种群进行了分子生态学研究.用17个随机引物扩增出190条清晰谱带,其中173条为多态性谱带,并利用POPGENE 3.2 Version 1.31软件对数据进行处理.结果表明,臭柏种群的遗传多样性较丰富,各种群多态位点百分比在64.21%～74.63%,以演替早期的半固定沙地油蒿+臭柏种群最高(74.63%),演替亚顶极时期的固定沙地臭柏种群最低(64.21%);臭柏种群间分化较小,种群间遗传分化系数G_st= 0.1761, 82.39%的遗传变异存在于种群内;聚类分析显示,演替阶段相近的种群聚集到一起,反映了臭柏种群的遗传分化和演替阶段密切相关.利用Nei指数统计RAPD数据,各种群基因多样度在0.2163～0.2564之间,也证实了大部分的遗传变异存在于种群内.     

大猿叶虫四地理种群遗传多样性的RAPD分析

以大猿叶虫Colaphellus bowringi Baly 4个地理种群的基因组DNA为材料, 进行RAPD分析。从80条引物中筛选出11条稳定性好、多态性高的引物进行扩增, 共得到65个扩增位点, 53个多态位点, Nei氏遗传多样性指数为0.1049~0.2061, Shannon多样性指数为0.1641~0.3167。结果表明所分析的大猿叶虫遗传变异很高, 其中江西龙南种群遗传变异最小, 山东泰安种群遗传变异最高。种群间的遗传距离范围为0.0636~0.3200, 其中江西龙南种群和江西修水种群间的遗传距离最小, 哈尔滨种群与江西龙南种群间的遗传距离最大, 种群遗传距离的大小与其相对地理距离的远近吻合。结果提示种群遗传距离的大小与它们生物学上的相似性有关联。     

Differentiation and population subdivision in Picea mongolica based on microsatellite analyses

Picea mongolica is distributed exclusively in the eastern edge of the fixed sand dunes in Hunshandake Sandy Land, China. In this area, three groups of P. mongolica can be identified by their predominant fruit colours (purple, red and green). In this study, we used seven polymorphic microsatellites to investigate the level of genetic variation and differentiation among these groups. A significant level of genetic differentiation was detected in pairwise group comparisons. Pairwise F_ST values ranged from 0.019 to 0.028, indicating, however, a level of similarity among the groups higher than that observed in other species of the Picea genus. Cluster analysis indicated that the three groups analyzed here derived from a single gene pool. We propose that moisture differences in the sand dunes may lead to the observed differentiation in P. mongolica populations, which may be accelerated by habitat fragmentation. The observed genetic differentiation among the three groups of P. mongolica supports their classification as three different ecotypes, namely Picea mongolica f. purpurea, Picea mongolica f. rubra, and Picea mongolica f. viridis.     

Analysis of genetic diversity in red clover (Trifolium pratense L.) breeding populations as revealed by RAPD genetic markers.

Red clover is an important forage legume species for temperate regions and very little is known about the genetic organization of its breeding populations. We used random amplified polymorphic DNA (RAPD) genetic markers to address the genetic diversity and the distribution of variation in 20 breeding populations and cultivars from Chile, Argentina, Uruguay, and Switzerland. Genetic distances were calculated for all possible pairwise combinations. A high level of polymorphism was found and the proportion of polymorphic loci across populations was 74.2%. A population derived from a non-certified seedlot displayed a higher proportion of polymorphic loci than its respective certified seedlot. Gene diversity values and population genetics parameters suggest that the populations analyzed are diverse. An analysis of molecular variance (AMOVA) revealed that the largest proportion of variation (80.4%) resides at the within population level. RAPD markers are a useful tool for red clover breeding programs. A dendrogram based on genetic distances divided the breeding populations analyzed into three distinct groups. The amount and partition of diversity observed can be of value in identifying the populations that parents of synthetic cultivars are derived from and to exploit the variation available in the populations analyzed.