Spatial and temporal occurrence of invertebrates in a chalk stream,Berkshire, England

The invertebrate assemblages of the River Lambourn and its tributary, the Winterbourne stream, were investigated as part of a broad ecological study prior to water resource development in the catchment. The longitudinal distribution of the invertebrate fauna within the Winterbourne stream was examined in detail and supporting data for the R. Lambourn revealed that the upstream intermittent section of each water course had an invertebrate assemblage which was distinct from the fauna downstream where flow was permanent. Within the perennial zone taxon richness tended to increase downstream.A one-year programme of monthly quantitative sampling on five distinct biotopes (Ranunculus, Berula, Callitriche, gravel and silt) at two contrasted sites (shaded and unshaded) was undertaken in the lower perennial of the R. Lambourn below the confluence with the Winterbourne. On each study site, the taxon richness, numerical abundance and biomass of invertebrates were significantly higher on the three macrophytes than on gravel and silt. There were also statistically significant seasonal changes in the biomass of invertebrates on each site. Estimates of total biomass of invertebrates per site revealed a late spring peak (May/June) and a late autumn (November/December) peak, neither of which coincided with the summer peak biomass of macrophytes. This suggested that, in the lower perennial, the level of food resources (epiphytic algae in late spring and fallen tree leaves plus decaying macrophytes in autumn) rather than available habitat, were a major influence on population levels for most of the year.Quantitative sampling of each biotope on each site continued in June and December only for a period of 8 years (1971–78), during which time the river experienced a minor drought (1973) and a severe drought (1976). The Chironomidae showed a strong positive response to conditions of low flow in June of 1973 and 1976, when exceptionally high densities of larvae were recorded. Although further between-year differences were recorded in several other major components of the invertebrate fauna, which may have been related to conditions of low discharge, they did not have long-term consequences for the fauna in the lower perennial of the R. Lambourn.In contrast, in the upper perennial, the prolonged drought of 1976 resulted in the loss of wetted perimeter and macrophytes, coupled with deposition of silt, all of which had deleterious effects on the invertebrate assemblages. The following year, despite a normal discharge regime and the removal of silt, some submerged macrophytes were slow to return to their pre-drought condition. In the intermittent section, the drought of 1976 resulted in the total loss of flow for a 16 month period instead of a more typical four month period of water loss.Thus, chalk streams encompass within a single system both stable and extreme hydrological regimes which offer unique opportunities for investigating the processes of community formation and maintenance.     

The Crustacea of some chalk streams in southern England

Records of Crustacea from chalk streams in southern England are described. Classification of sites suggested that flow regime was an important influence on the fauna and the distribution of individual species are discussed in this respect.     

Drift of stream invertebrates below a cave source

Stream invertebrate drift below the cave source of South Branch Creek, Minnesota, generally increased rapidly. Ephemeroptera and Trichoptera increased rapidly and then decreased at the lower stations (to 430 m) below the cave. Chironomidae drift, in high numbers but low biomass because of their small size, increased fairly rapidly and leveled out at the lowermost stations. Gastropods increased slowly below the cave, reached a maximum, then decreased somewhat at the lowermost station. Drifting oligochaetes, small in size but in very large numbers, increased more slowly below the cave and appeared not to have reached a maximum at the lowermost station. It was concluded that, in general, drift increases fairly rapidly below the stream origin and fluctuates in the upper reaches, probably reflecting benthic population abundance and local ecological conditions, before attaining equilibria downstream, rather than increasing linearly due to cumulative effects. Paper no. 11,172 Scientific Journal Series, Minnesota Agricultural Experiment Station, St. Paul, Minnesota 55108 Paper no. 11,172 Scientific Journal Series, Minnesota Agricultural Experiment Station, St. Paul, Minnesota 55108     

Seasonal changes in composition and biomass of epilithic algal floras of a chalk stream and a soft water stream with estimates of production

Microscopic epilithic algae in the River Itchen at Otterbourne near Southampton and in the Ober Water in the New Forest were studied during 1984 and 1985. The River Itchen rises from chalk springs and has a steady pH near 8.2 and a mean alkalinity of 236 mg HCO₃ 1^–1; at the study site the river is about 16 m wide and 20 cm deep, with a mean flow rate of 0.33 m s^–1 and a discharge ranging through the year between 0.34 and 2.46 m³ s^–1. The Ober Water, which drains sands and gravels, has a pH between 6.9 and 7.2 and a mean alkalinity of about 50 mg HCO₃ 1^–1; at the study site it is about 6 m wide, with a mean flow rate of 0.27 m s^–1 and a discharge ranging through the year between 0.08 and 1.0 m³ s^–1.Epilithic algae removed from the pebbles that form the major part of the beds of both streams show seasonal changes in abundance and composition. Diatoms peaked in April/May and dominate the epilithic flora in both streams, comprising 70–95% of all algal cells; highest numbers of chlorophytes occurred in summer and cyanophytes increased in autumn. The species composition of the epilithic flora in the two streams was different, as was the population density; algal cell numbers ranged between 500 and 7000 cells mm^–2 of stream floor in the River Itchen and between 8 and 320 cells mm^–2 of stream floor in the Ober Water. The chlorophyll a content of epilithic algae in the River Itchen ranged between 115 and 415 mg m^–2 of stream floor, representing an annual mean biomass of about 8 g m^–2, whereas in the Ober Water a chlorophyll a content of 2.2 to 44 mg m^–2 of stream floor was found, representing an annual mean biomass of about 1 g m^–2. Cautious estimates of the annual production of epilithic algae in these streams suggest a value of about 600 g organic dry weight m^–2 in the River Itchen and about 75 g m^–2 in the Ober Water.     

A comparative study of the dispersal of 10 species of stream invertebrates

1. Apart from downstream dispersal through invertebrate drift, few quantitative data are available to model the dispersal of stream invertebrates, i.e. the outward spreading of animals from their point of origin or release. The present study provides comparative data for 10 species, using two independent methods: unmarked animals in six stream channels built over a stony stream and marked animals in the natural stream. Experiments were performed in April and June 1973 and 1974, with initial numbers of each species varying from 20 to 80 in the stream channels and 20 to 60 for marked animals. 2. Results were the same for marked invertebrates and those in the channels. Dispersal was not density‐dependent; the number of dispersing animals was a constant proportion of the initial number for each species. The relationship between upstream or downstream dispersal distance and the number of animals travelling that distance was well described by an inverse power function for all species (exponential and log models were poorer fits). Results varied between species but were similar within species for the 4 months, and therefore were unaffected by variations in mean water velocity (range 0.04–0.35 m s^?1) or water temperature (range 6.7–8.9 °C in April, 12.1–14.8 °C in June). 3. Species were arranged in order, according to their dispersal abilities. Three carnivores (Perlodes, Rhyacophila, Isoperla) dispersed most rapidly (70–91% in 24 h, maximum distances 9.5–13.5 m per day), followed by two species (Protonemura, Rhithrogena) in which about half their initial numbers dispersed (50–51% in 24 h, 7.5–8 m per day), and four species (Ecdyonurus, Hydropsyche, Gammarus, Baetis) in which less than half dispersed (33–40% in 24 h, 5.5–7 m per day). Dispersal was predominantly upstream for all nine species. Few larvae (20%) of Potamophylax dispersed, with similar maximum upstream and downstream distances of 3.5 m per day. The mean time spent drifting downstream was known for seven species from previous studies, and correlated positively with their dispersal distances. Therefore, the species formed a continuum from rapid to very slow dispersers. These interspecific differences should be considered when evaluating the role of dispersal in the maintenance of genetic diversity in stream invertebrates, and in their ability to colonise or re‐colonise habitats.     

Time spent in the drift by downstream-dispersing invertebrates in a Lake District stream

1. The objective was to determine the time spent in the drift by different taxa of stream invertebrates. Most data were obtained from an earlier experimental study to determine the distances travelled by drifting invertebrates of 16 taxa in Wilfin Beck. Experiments were performed at two sites: ‘site 4’ in a stony, fast‐flowing, section of stream, ‘site 3’ in a deeper stream section where macrophytes were abundant. 2. The significant relationship between the mean distance x (m) travelled in the drift and modal water velocity V (m s^?1) was described by a power function in the earlier study but, as the power was close to one, a linear relationship has now been found to provide a satisfactory model. The rate of increase in x (m) with increasing V varied considerably between taxa. The mean time [mean t (s)] spent in the drift was estimated by dividing each x (m) by the appropriate V. Mean t (s) for each taxon was usually very constant over a wide range of V at each site (0.10–0.60 m s^?1 at site 4, 0.15–0.53 m s^?1 at site 3). A simple model estimated the time spent in the drift by different percentages (e.g. 75, 50, 10 and 1%) of the drifting invertebrates. 3. The experimental taxa at site 4 were divided into three groups according to the mean time spent in the drift. Mean t (s) for the five taxa in group 1 (32.8 s) was not significantly different from that obtained in control experiments with a mixed group of dead invertebrates. A similar time (33.0 s) was obtained for the five taxa in group 2, except at water velocities less than 0.2 m s^?1 when the mean t (s) decreased to 15–21 s. Mean t (s) was constant for each of the six taxa in group 3, and significantly less than that for groups 1 and 2. Mean values ranged from 28.8 s for Ephemerella ignita to only 9.4 s for Baetis rhodani and Gammarus pulex. All mean values were lower at site 3, presumably because of the dense stands of macrophytes, with mean values of 12.9 s for the five taxa in group 1 (equalling the value for dead invertebrates). Mean values for the six remaining taxa varied from 6.4 s for Simulium spp. to only 4.9 s for Baetis rhodani and 4.8 s for Gammarus pulex. It was concluded from a discussion of this study that the time spent in the drift may provide a useful measure for comparing the downstream dispersal of invertebrates in different streams, and may be a useful addition to models for the drift feeding of salmonids.     

A comparison of the relative contributions of temporal and spatial variation in the density of drifting invertebrates in a Dorset (U.K.) chalk stream

1. Invertebrate drift is commonly investigated in streams, with the majority of studies focussed on temporal (typically diel) variation. In comparison, few studies have investigated spatial variation in drift and there is little consensus among them. We tested the hypothesis that spatial variation in invertebrate drift is as important as temporal variation. 2. The density of drifting invertebrates in a chalk stream was sampled using an array of nets arranged to determine vertical, lateral and longitudinal variation. Samples were collected at dawn, during the day, at dusk and by night, on four separate monthly occasions. Insecta and Crustacea were analysed separately to identify the effect of differing life history strategies. The density of drifting debris was also recorded, to act as a null model. 3. Time of day and vertical position together explained the majority of the variance in invertebrate drift (79% for Insecta and 97% for Crustacea), with drift densities higher at dusk and night, and nearer the stream bed. Independently, time of day (38%, Insecta; 52%, Crustacea) and vertical position (41%, Insecta; 45%, Crustacea) explained a similar amount of the observed variance. Month explained some of the variance in insect drift (9%) but none for Crustacea. 4. Variation in the density of drifting debris showed little in common with invertebrate drift. There was little variation associated with time of day and only 27% of the observed variation in debris could be explained by the factors investigated here, with month explaining the largest proportion (20%). We suggest the difference in drifting debris and invertebrates provides further evidence for a strong behavioural component in invertebrate drift. 5. Spatial variation in invertebrate drift can be of the same order of magnitude as the much‐described diel temporal variation. The extent of this spatial variation poses problems when attempting to quantify invertebrate drift and we recommend that spatial replication should be incorporated into drift studies.     

Substrate selection and seasonal variation in densities of invertebrates in stream pools of a tropical river

Spatial distribution and seasonal variation in densities of the invertebrates were investigated for a year in three stream pools of a South Indian river. The effects of season, substrate type and water depth on the distribution were analyzed. Substrate type and season influenced the invertebrate distribution the most. Leaf packs harboured most of the organisms followed by macro-algal substrate and sand. The lowest densities were observed on rocky substrates and in the water column. Rocky substrates in shallow water supported higher densities of total invertebrates than deeper areas. Chironomid larvae dominated all benthic substrates throughout the year. Of the 19 invertebrate taxa studied, 6 showed no seasonality in densities, and most of the rest showed their highest densities in the pre-monsoon period and lowest in the SW monsoon or post-monsoon periods. However, in two of the three pools, the densities of total invertebrates were highest during the post-monsoon period with secondary peaks in the pre-monsoon period.     

Response of the flora and macroinvertebrate fauna of a chalk stream site to changes in management

1. Temporal changes in a series of habitats and their macroinvertebrate assemblages were examined on a 50‐m section of a chalk stream in Berkshire, England between June 1975–79 and June 1997–2001. 2. The site was part of a trout fishery in 1975–79, when river management included instream weed cutting together with control of bankside trees and riparian vegetation. Management ceased in the 1980s and by 1997–2001, the site was heavily shaded by trees and riparian vegetation. 3. The mean area of instream macrophytes decreased by 50% between the first and second sampling period. In contrast, gravel and silt increased and invading marginal vegetation formed a new habitat. 4. Changes in macroinvertebrate family richness between sampling periods were scale dependant. Although there were, on average, significantly more families in individual replicates in 1975–79 than in 1997–2001, total family richness for the site in each year did not differ significantly between sampling periods. 5. Sixty families of macroinvertebrates were recorded during the study, 50 in both sampling periods, 53 in 1975–79 and 57 in 1997–2001. This small increase in site family richness may be due to the invading marginal plants. 6. Total macroinvertebrate abundance was significantly lower in the second sampling period. A major drought in 1976 resulted in significantly higher densities of macroinvertebrates, partly through the exploitation of epiphytic diatoms by chironomid larvae. A drought in 1997 failed to elicit a similar response because of the limited macrophytes and diatoms under heavy shading by trees and marginal vegetation. 7. Significant increases in important shredders and decreases in some scrapers between the early and later sampling years largely reflected changes in available food resources. 8. Whereas macroinvertebrate family richness has been conserved under the recent ‘no management’ regime, the site is now less attractive as a fishery because of poor access and lower densities of some macroinvertebrates taken by brown trout.     

Active entry of stream benthic macroinvertebrates into the water column

Field experiments investigated the possible active entry of stream benthos into the water column. Over a 1-year period, sediment baskets were suspended for 24 hours in a stream pool so that only swimming or floating organisms, essentially unaided by current, could colonize them. A variety of benthos, including taxa characteristic of riffles, colonized the baskets, with colonization highest in late summer and negligible in winter.A modified drift net towed through the pool was used to quantitatively sample benthic animals actually in the water column. Nighttime tows captured a diverse, abundant fauna and indicated densities substantially higher than invertebrate drift densities reported in the literature. Daytime tows yielded little. Estimated percentages of the benthos in the water column at a given time were generally < 1.0%.These findings suggest that not all invertebrate drift is the result of passive mechanical removal from the substrate by current.     

A continuous study of the total drift of freshwater shrimps, Gammarus pulex, in a small stony stream in the English Lake District

1. The objective was to determine the major factors affecting the downstream dispersal (drift) of freshwater shrimps, Gammarus pulex. Sample replication and frequency are major problems in the quantification of drift. For the first time, these problems were avoided by sampling the whole stream continuously so that all the shrimps drifting downstream at the sampling point were caught in a net emptied at dusk and dawn in 1966, and every 3 days in 1967. 2. There was no consistent seasonal pattern in drift rates, but a high proportion of annual drift was taken in only a few samples. There was a nocturnal diel pattern of drift with peaks soon after dusk and just before dawn. A power function described the significant (P < 0.001) relationship between drift and flow, and was used to neutralise the dominant effects of flow by standardising total drift over 24 h, nocturnal drift and diurnal drift (drift per 50 m³). These were all significantly (P < 0.001) related to benthos density, but not to date, temperature, or length of the night or day. 3. The relationship between drift values and the independent variables, flow and benthos density, was well described (P < 0.001) by a multiple‐regression model. Adding temperature, date, and/or the length of the night or day did not improve model fit. Variations in flow and benthos density explained 94% of the variation in total drift over 24 h, 97% of the variation in nocturnal drift, but only 44% of the variation in diurnal drift. A power function described (P < 0.001) the relationship between total drift and the volume of water sampled over 3‐day periods in 1967. Flow explained 95% of this drift variation; it was unnecessary to add another variable such as benthos density. 4. The significance of this study is that it avoided the problems associated with the quantification of drift samples. Therefore, the conclusions are more robust than those of many previous studies. A high proportion of the annual drift losses would have been undetected by intermittent sampling. Temperature, season, night or day length had no significant effect on drift densities, and the relationship between drift and benthos densities was proportional, not density dependent. The nocturnal increase in drift could not be interpreted as an antipredator behaviour. The dominance of flow and benthos density was apparent but the quantitative relationships posed further questions, especially those related to drift distances at different velocities.     

Upstream-downstream movements of aquatic invertebrates in a Rocky Mountain stream

Simultaneous collections of drift and organisms moving either upstream or downstream in association with the substrate were made using a specially designed sampler. Samples were taken in a diel series along a transect across the study riffle of a Colorado foothills stream on six dates over an annual cycle. In addition to longitudinal movements, taxonomic composition and diel periodicity were evaluated. The insect-dominated fauna showed a net downstream displacement. Only the caddisflies Helicopsyche borealis and Hesperophylax occidentalis exhibited net upstream movement, primarily a result of low drift frequencies. The taxonomic composition of moving invertebrates differed from that of the benthos. Drift resembled downstream moving substrate-associated invertebrates in composition, but differed from that of the upstream directed fauna. Taxa collectively exhibited four types of diel patterns: 1) similar downstream (drift and substrate-associated movements) patterns, which generally differed from the upstream pattern; 2) similar benthic (upstream and downstream) patterns, which differed from that of drift; 3) aperiodic patterns; and 4) independent patterns for each type of directional movement. Analysis of size classes based on head capsule width for the mayfly Baetis tricaudatus showed significantly smaller size in stationary individuals compared with moving individuals in the population and revealed that nymphs moving during the day were smaller than those moving at night.     

A versatile laboratory stream with examples of its use in the investigation of invertebrate behaviour

A versatile and simple laboratory stream was designed and used to investigate the burrowing activity of two insects in response to changes in water velocity and substrate type.Aphelocheirus aestivalis adults were unable to burrow into sand, however, a small proportion of juveniles did burrow in this substrate. The presence of sand in gravel reduced the burrowing success of adults. Steady increases in flow stimulated the burrowing response of both adults and juveniles on gravel and sandy gravel.Ephemera danica was unable to burrow in sand alone at the velocities used in the experiment. The presence of particles greater than 2 mm in diameter in the substrate appeared to be essential for successful burrowing under the test conditions. An increase in flow from 3 to 8 cm s^–1 resulted in an increase in burrowing. The time taken for each specimen to burrow varied widely within replicate tests but most specimens had penetrated the substrate within 150 seconds of introduction. The implications of these observations in influencing the microdistribution of these species are discussed.     

Effect of flagella expression on adhesion of Achromobacter piechaudii to chalk surfaces

Aims: To examine flagella role and cell motility in adhesion of Achromobacter piechaudii to chalk. Methods and Results: Transmission electron microscopy revealed that stationary cells have thicker and longer flagella than logarithmic cells. SDS‐PAGE analysis showed that flagellin was more abundant in stationary cells than logarithmic ones. Sonication or inhibition of flagellin synthesis caused a 30% reduction in adhesion to chalk. Preincubation of chalk with flagella extracts reduced adhesion, by 50%. Three motility mutants were isolated. Mutants 94 and 153 were nonmotile, expressed normal levels of flagellin, have regular flagella and exhibited reduced adhesion. Mutant 208 expressed low levels of flagellin, no flagella and a spherical cell shape but with normal adhesion capacity. Conclusions: Multiple cell surface factors affect the adhesion efficiency to chalk. Flagella per se through physical interaction and through cell motility contribute to the adhesion process. The adhesion behaviour of mutant 208 suggests that cell shape can compensate for flagellar removal and motility. Significance and Impact of the Study: Physiological status affects bacterial cell surface properties and hence adhesion efficiency to chalk. This interaction is essential to sustain biodegradation activities and thus, remediation of contaminated chalk aquifers.     

Studies on Ephemerella ignita (Poda) in a chalk stream in Southern England

The nymphs ofEphemerella ignita occurred in all months except October in the Bere Stream at Bere Heath, a small chalk stream in Southern England. Peak densities of 1,498 m^–2 and 753 m^–2 were recorded in May by two sampling methods used simultaneously. The seasonal patterns of growth and abundance are compared with the findings of other authors. A maximum biomass of 0.82 g m^–2 preserved dry weight is compared with figures for two of the most common invertebrate groups present; the Simuliidae and Oligochaeta.     

The influence of abiotic factors and density-dependent mechanisms on between-year variations in a stream invertebrate community

Samples of invertebrates were taken in two seasons (October and April) over 5 years in a trout stream in Belgium. Diversity, total benthic invertebrate density, and densities of 27 of 34 taxa tested showed significant differences between years. Significant seasonal effects and interactions were observed in 18 and 7 taxa respectively. The most common pattern of between-year variation was related to hydrological events (flooding) which caused low densities for many species. Most species recovered rapidly, but the recovery of some predators seemed to show a delay of one year. The amphipod Gammarus fossarum appeared to respond positively to flooding as well as to certain post-flood conditions. A significant positive correlation between mortality and the logarithm of initial density was obtained for 6 of 11 species tested. The relationships between mortality and abiotic factors such as water temperature, mean and maximum water level, were very poor. A hierarchy of environmental factors in the regulation of stream macroinvertebrate populations is suggested with: (1) exceptional abiotic events acting in a density-independent manner; and (2) biotic factors that may account for density-dependent regulation.     

Habitat use by the fish assemblages of two chalk streams

Patterns of habitat use by fish assemblages in two chalk streams in southern England were examined to identify species preferences with respect to major habitat gradients. Both study sites, although differing in some physical habitat characteristics, mainly channel width, water temperature and instream cover, could be arranged similarly along a continuum extending from erosional to depositional habitats. Twelve fish species were collected from stream surveys conducted during July 1993. The habitat was partitioned into six fish species associations that could be assigned to three habitat guilds: depositional ( Barbatula barbatula, Gasterosteus aculeatus and Anguilla anguilla ), riffle ( Leuciscus leuciscus, Thymallus thymallus and Salmo salar ) and generalist ( Salmo trutta, Phoxinus phoxinus, Gobio gobio, Cottus gobio, Lampetra planeri and Pleuronectes flesus ). At low to moderate densities the different species associations were collected in the same habitat patch, but at higher densities there was a clear tendency to mutual avoidance. In particular, large trout appeared as strong interactors that tended to exclude other species from their territories. It is hypothesized that the fish assemblage of the Mill Stream and Bere Stream have partitioned the habitat in such a way as to minimize potential Competition.     

Seasonal changes in composition and biomass of epiphytic algae on the macrophyte Ranunculus penicillatus in a chalk stream,with estimates of production,and observations on the epiphytes of Cladophora glomerata

The epiphytic algae on surfaces of the macrophyte Ranunculus penicillatus (Dumort.) Bab. var. calcareus (R. W. Butcher) C. D. K. Cook and on Cladophora glomerata (L.) Kütz growing in the River Itchen at Otterbourne near Southampton were studied between February 1984 and June 1985. The river at this site has a mean flow rate of 0.33 m s^–1, and is about 16 m wide and on average 20 cm deep, with a discharge ranging through the year between 0.34 and 2.46 m³ s^–1. The pH of the river varies little around 8.2, with a mean alkalinity of 236 mg HCO _inf3 ^sup1 l^–1, because of its origin from chalk springs. Ranunculus grows throughout the year, with peaks of biomass in spring and autumn. It forms a very large surface for attachment of epiphytes, and covers on average 40% of the stream bed. Numbers of epiphyte cells removed from Ranunculus ranged through the year between 52 × 10³ and 271 × 10³ cells mm^–2 stream floor, with maximum numbers in April, and a secondary peak in October. This pattern partly reflects fluctuations in the biomass of Ranunculus; the number of cells per unit area of plant surface showed a broader spring peak and lower fluctuations in other seasons. Diatoms formed 65 to 98% of these epiphyte cells, with chlorophytes reaching their peak (10%) in summer and cyanophytes (25%) in autumn. Estimates of biomass of these epiphytic forms, derived from measurements of chlorophyll c, indicate a range between 30 and 100 g dry weight m^–2 of weed bed. Colonisation studies showed that the algae grow and reproduce throughout the year, with a mean generation time of about 5 days, suggesting an annual production of about 3 kg dry weight m^–2 of weed bed, which makes epiphytic algae the principal primary producers in the stream. The numbers and biomass of epiphytic algae on Cladophora are considerably less.The species of epiphytic algae found on Ranunculus were generally similar to those growing on Cladophora, and to epilithic algae on pebbles of the stream bed, but different species were dominant on the different substrata. Algal cells in the water column were all derived from benthic habitats, although their relative abundance was very different.     

狗獾粪便DNA提取方法的初步探讨

在京杭大运河扬州段堤坝上采集狗獾的新鲜粪便,采用预处理-酚/氯仿抽提法、NaCl改良法、异硫氰酸胍裂解法、淀粉吸附法及QIAamp试剂盒法5种方法对粪便样品中狗獾DNA进行提取,探讨狗獾粪便样品中DNA提取方法和优化条件。结果表明,在5种提取方法中,淀粉吸附法的效果明显优于其它4种方法。采用粪便裂解液快速裂解细胞后,加入淀粉去除其中的大量PCR抑制物,然后用蛋白酶K裂解、酚/氯仿/异戊醇抽提,最后使用UNIQ-10柱纯化粪便DNA,对线粒体控制区和微卫星位点的PCR扩增反应及测序结果证实该方法的可行性。以上结果表明,通过该方法获得的粪便DNA能够用于更深入的分子遗传学等学科的研究。     

The role of fungi in the nutrition of stream invertebrates

Dead leaves falling into streams are an important food source for many invertebrates. They are generally made more palatable and more nutritious if they are first colonized by aquatic hyphomycetes and other micro-organisms. At least two mechanisms appear to be responsible for this conditioning effect: microbial production (addition of easily digested microbial compounds to the nutritionally poor leaf substrate), and microbial catalysis (conversion of indigestible leaf substances into digestible subunits by microbial enzymes). Different invertebrate species vary in their ability to take advantage of microbial conditioning. This appears to be influenced by their mobility, the range of their food resources and their ability to overcome defense mechanisms of leaf-colonizing microorganisms.