Mitochondrial data support an odd-nosed colobine clade

To obtain a more complete understanding of the evolutionary history of the leaf-eating monkeys we have examined the mitochondrial genome sequence of two African and six Asian colobines. Although taxonomists have proposed grouping the "odd-nosed" colobines (proboscis monkey, douc langur, and the snub-nosed monkey) together, phylogenetic support for such a clade has not been tested using molecular data. Phylogenetic analyses using parsimony, maximum likelihood, and Bayesian methods support a monophyletic clade of odd-nosed colobines consisting of Nasalis, Pygathrix, and Rhinopithecus, with tentative support for Nasalis occupying a basal position within this clade. The African and Asian colobine lineages are inferred to have diverged by 10.8 million years ago (mya or Ma). Within the Asian colobines the odd-nosed clade began to diversify by 6.7 Ma. These results augment our understanding of colobine evolution, particularly the nature and timing of the colobine expansion into Asia. This phylogenetic information will aid those developing conservation strategies for these highly endangered, diverse, and unique primates.     

Dental eruption sequence among colobine primates

Dental development is one aspect of growth that is linked to diet and to life history but has not been investigated among colobines since the work of Schultz [1935]. This study establishes the dental eruption sequence for several colobine species and compares it to that of other catarrhines. The mandibles and maxillae of two hundred and four juvenile colobine specimens were scored for presence or absence of permanent teeth and for stages of partial eruption. Eruption was defined as ranging between tooth emergence (any part of a tooth crown above the alveolar margin) and full occlusion, with three intermediate levels manifest between these boundaries. In African colobines, represented by C. guereza, C. angolensis and P. badius, M2 erupts before I2, and in C. angolensis it also erupts before I1. The canine is delayed, erupting after the premolars in females and after M3 in males. Asian colobines show greater diversity in eruption sequences. Nasalis shows no early eruption of the molars and is very similar to Macaca. In Trachypithecus and Pygathrix M(2) erupts before I(2). The canine in Trachypithecus is delayed, erupting after the premolars and, in some males, after M3. In Presbytis M2 erupts before both incisors; M3 erupts before C in both sexes, and often before both premolars. Although the actual timing of eruption is unknown, all colobine species examined except N. larvatus showed some degree of relatively early eruption of M2 and M3. The lack of this tendency in Nasalis sets this genus apart from all other colobines represented in this study. Dental eruption sequence is thought to reflect life history patterns. Early molar eruption in colobines was thought by Schultz (1935) to be a primitive character reflecting shorter life history. Faster growth rates found in folivorous primates have been interpreted as being related to an adaptation to folivory (Leigh 1994), and early eruption of molars may be part of this dietary specialization. The relationships between dental development and both diet and life history are investigated.     

Mapping homology between human and black and white colobine monkey chromosomes by fluorescent in situ hybridization

We used in situ hybridization of chromosome specific DNA probes (“chromosome painting”) of all human chromosomes to establish homologies between the human and the white and black colobus (Colobus guereza 2n = 44). The 24 human paints gave 31 signals on the autosomes (haploid male chromosome set). Robertsonian translocations between chromosomes homologus to human 14 and 15, 21 and 22, form colobine chromosomes 6 and 16, respectively. Reciprocal translocations were found between human chromosomes 1 and 10, 1 and 17, as well as 3 and 19. The alternating hybridization signals between human 3 and 19 on Colobus chromosome 12 show that in this case a reciprocal translocation was followed by a pericentric inversion. The hybridization data show that in spite of the same diploid number and similar Fundamental Numbers, the black and white colobine monkey differs from Presbytis cristata, an Asian colobine, by 6 reciprocal translocations. Comparisons with the hybridization patterns in other primates show that some Asian colobines have a more derived karyotype with respect to African colobines, macaques, great apes, and humans. Chromosome painting also clearly shows that similarities in diploid number and chromosome morphology both between colobines and gibbons are due to convergence. Am. J. Primatol. 42:289–298, 1997. © 1997 Wiley-Liss, Inc.     

亚洲疣猴面颅和脑颅的比较研究

对亚洲疣猴123个头骨的面颅和脑颅的14项变量作了分析。讨论了东亚古环境的变迁对亚洲疣猴辐射的影响。据分析结果,似乎获得了几个新结论:1)亚洲疣猴可能还有另一条迁移路线——沿特蒂斯海北岸的西藏南部进入我国横断山区,故它们可能有两个分化或辐射中心,即“Sundaland”和我国的横断山地区;2)Nasalis(2n=48)可能是亚洲疣猴中最原始的一个属;3)Pygathrix与Presbytiscus具有最大的相似性,但前者与Phinopithecus相差甚远;4)Phinopithecus无论面颅和脑颅或是起源都是亚洲疣猴中更为特化的一个属。提出了亚洲疣猴系统发育支序图。     

Chromosome Painting Shows That Pygathrix nemaeus Has the Most Basal Karyotype Among Asian Colobinae

We mapped the chromosomal homology of Pygathrix namaeus (douc) with human and other primates by in situ hybridization of human chromosome paints. The synteny of 3 human chromosomes (1, 2, 19) is fragmented in the douc karyotype and the 23 human probes (autosomes plus X) provided 26 signals. There are associations between human chromosomes 14/15, 21/22, and 1/19. Human chromosomes 1 and 19 are divided in two segments and associated on douc chromosomes 8 and 10. The fragmentation and association of human chromosomes 1 and 19 is best explained as the result of a reciprocal translocation, which occurs in all documented Asian colobines studied, but not in the African species Colobus guereza. However, the homologs to douc chromosome 10 in all other Asian documented colobines show an additional pericentric inversion. Our results indicate that Pygathrix nemeus is karyologically the most conservative colobine species yet studied and that this species probably diverged early after the separation of Asian and African Colobinae. The data reinforce the monophyly of the Colobinae and their division into an African and an Asian clade.     

Molecular phylogeny of Old World monkeys (Cercopithecidae) as inferred from gamma-globin DNA sequences

DNA sequence data of the nuclear-encoded gamma1-gamma2-globin duplication region were used to examine the phylogenetic relationships of 16 cercopithecid (Old World monkey) species representing 12 extant genera. Morphology- and molecular-based hypotheses of Old World monkey branching patterns are generally congruent, except for generic relationships within the subtribe Papionina. The cercopithecids divide into colobines (leaf-eating monkeys) and cercopithecines (cheek-pouched monkeys). The colobines examined by the DNA data divide into an Asian clade (Nasalis, proboscis monkeys; Trachypithecus, langurs) and an African clade (Colobus, colobus monkeys). The cercopithecines divide into tribes Cercopithecini (Erythrocebus, patas monkey; Chlorocebus, green monkeys; Cercopithecus, guenons) and Papionini. Papionins divide into subtribes Macacina (Macaca, macaques) and Papionina (Papio, hamadryas baboons; Mandrillus, drills and mandrills; Theropithecus, gelada baboons; Lophocebus, arboreal mangabeys; Cercocebus, terrestrial mangabeys). In a morphologically based classification, Mandrillus is a subgenus of Papio, whereas Lophocebus is a subgenus of Cercocebus. In contrast, the molecular evidence treats Mandrillus as a subgenus of Cercocebus, and treats both Theropithecus and Lophocebus as subgenera of Papio. Local molecular clock divergence time estimates were used as a yardstick in a "rank equals age" system to propose a reduction in taxonomic rank for most clades within Cercopithecidae.     

Evolutionary history of the odd-nosed monkeys and the phylogenetic position of the newly described Myanmar snub-nosed monkey Rhinopithecus strykeri

Odd-nosed monkeys represent one of the two major groups of Asian colobines. Our knowledge about this primate group is still limited as it is highlighted by the recent discovery of a new species in Northern Myanmar. Although a common origin of the group is now widely accepted, the phylogenetic relationships among its genera and species, and the biogeographic processes leading to their current distribution are largely unknown. To address these issues, we have analyzed complete mitochondrial genomes and 12 nuclear loci, including one X chromosomal, six Y chromosomal and five autosomal loci, from all ten odd-nosed monkey species. The gene tree topologies and divergence age estimates derived from different markers were highly similar, but differed in placing various species or haplogroups within the genera Rhinopithecus and Pygathrix. Based on our data, Rhinopithecus represent the most basal lineage, and Nasalis and Simias form closely related sister taxa, suggesting a Northern origin of odd-nosed monkeys and a later invasion into Indochina and Sundaland. According to our divergence age estimates, the lineages leading to the genera Rhinopithecus, Pygathrix and Nasalis+Simias originated in the late Miocene, while differentiation events within these genera and also the split between Nasalis and Simias occurred in the Pleistocene. Observed gene tree discordances between mitochondrial and nuclear datasets, and paraphylies in the mitochondrial dataset for some species of the genera Rhinopithecus and Pygathrix suggest secondary gene flow after the taxa initially diverged. Most likely such events were triggered by dramatic changes in geology and climate within the region. Overall, our study provides the most comprehensive view on odd-nosed monkey evolution and emphasizes that data from differentially inherited markers are crucial to better understand evolutionary relationships and to trace secondary gene flow.     

Mitochondrial cytochrome b gene sequences of old world monkeys: With special reference on evolution of Asian colobines

The classification and phylogenetic relationships of the Old World monkeys are still controversial. For Asian colobines, from three to nine genera were recognized by different primatologists. In the present study, we have sequenced a 424 bp mitochondrial tRNA^Thr gene and cytochrome b gene fragment fromMacaca mulatta, Mandrillus sphinx, Mandrillus leucophaeus, Semnopithecus entellus, Trachypithecus vetulus, T. johnii, T. phayrei, T. francoisi, Pygathrix nemaeus, Rhinopithecus roxellanae, R. bieti, R. avunculus, Nasalis larvatus, andColobus polykomos in order to gain independent information on the classification and phylogenetic relationships of those species. Phylogenetic trees were constructed with parsimony analysis by weighting transversions 5 or 10 fold greater than transitions. Our results support the following conclusions: (1) the Old World monkeys are divided into two subfamilies; (2) that among the colobines,Colobus, the African group, diverged first, andNasalis andRhinopithecus form a sister clade toPygathrix; (3) that there are two clades within leaf monkeys, i.e. 1)S. entellus, T. johnii, andT. vetulus, and 2)T. phayrei andT. francoisi; (4) thatRhinopithecus avunculus, R. roxellanae, andR. bieti are closely related to each other, and they should be placed into the same subgenus; (5) thatRhinopithecus is a distinct genus; and (6) that the ancestors of Asian colobines migrated from Africa to Asia during the late Pliocene or early Pleistocene.     

Evidence for eight tandem and five centric fusions in the evolution of the karyotype ofAethomys namaquensis A. Smith (Rodentia: Muridae)

G- and C-banded chromosomes ofAethomys namaquensis (2n=24),A. chrysophilus (2n=44), andPraomys coucha (2n=36) are compared and contrasted with publised material on Australian Muridae and North American Sigmodontidae. Direction and types of chromosomal rearrangements are established using cladistic methodology. An acrocentric morphology for chromosomes 5, 14, 15 and 20 (numbering system fromPeromyscus) are proposed as primitive for the common ancestor of the Muridae and Sigmodontidae rodent lineages. Reduced diploid number ofAethomys namaquensis is derived by eight tandem and five centric fusions since divergence from the common ancestor withA. chrysophilus. The two species ofAethomys share one derived metacentric chromosome that distinguishes them fromPraomys. Praomys has unique chromosomes which can be derived from the proposed primitive condition by five centric fusions and five pericentric inversions. It is concluded that karyotypic orthoselection for tandem and centric fusions is best explained by cellular or biochemical mechanisms rather than variation in population characteristics.     

<Emphasis Type="Italic">Spizaetus</Emphasis> hawk-eagles as predators of arboreal colobines

The predation pressure put on primates by diurnal birds of prey differs greatly between continents. Africa and South America have specialist raptors (e.g. crowned hawk-eagle Stephanoaetus coronatus and harpy eagle Harpia harpyja) whereas in Asia the only such specialist’s (Philippine eagle Pithecophaga jefferyi) distribution is largely allopatric with primates. The almost universal absence of polyspecific groups in Asia (common in Africa and South America) may indicate reduced predation pressure. As such there is almost no information on predation pressures on primates in Asia by raptors. Here we report successful predation of a juvenile banded langur Presbytis femoralis (~2 kg) by a changeable hawk-eagle Spizaetus cirrhatus. The troop that was attacked displayed no signs of being alarmed, and no calls were made before the event. We argue that in insular Southeast Asia, especially, large Spizaetus hawk-eagles (~2 kg) are significant predators of arboreal colobines. Using data on the relative size of sympatric Spizaetus hawk-eagles and colobines we make predictions on where geographically we can expect the highest predation pressure (Thai–Malay Peninsula) and which colobines are least (Nasalis larvatus, Trachypithecus auratus, P. thomasi) and most (P. femoralis, T. cristatus) affected.     

A test of the karyotypic fissioning theory of primate evolution

Karyotypic fissioning theory has been put forward by a number of researchers as a possible driving force of mammalian evolution. Most recently, Giusto and Margulis (BioSystems, 13 (1981) 267–302) hypothesized that karyotypic fissioning best explains the evolution of Old World monkeys, apes, and humans. According to their hypothesis, hominoid karyotypes were derived from the monkey chromosome complement by just such such a fissioning event. That hypothesis is tested here by comparing the G-banded chromosomes of humans and great apes with eight species of Old World monkeys. Five submetacentric chromosomes between apes and monkeys have identical banding patterns and nine chromosomes share the same pericentric inversion. Such extensive karyological similarities are not in accodance with, or predicted by karyotypic fissioning. Apparently, karyotypic fissioning is an extremely uneconomical model of chromosomal evolution. The strong conservation of banding patterns sometimes involving the retention of identical chromosomes indicates that ancient linkages of genes have probably been maintained through many speciation events.     

中国云南果蝇属暗果蝇种组的核型分化

观察了新近发现于我国云南的果蝇属暗果蝇种组(Drosophila obscura species group)种类D．luguensis、D．dianensis和D．limingi的有丝分裂中期核型,并将3个种的核型与各自的近缘种类进行了比较。D．luguensis具2n=12条染色体,包括3对中央着丝粒(V形)染色体、2对近端着丝粒(棒状)染色体以及1对微小(点状)染色体。其中X和Y染色体均为中央着丝粒染色体。D．dianensis和D．limingi具2n=10条染色体,包括1对大的V形常染色体,1对小的V形常染色体,2对J形(亚中着丝粒型)常染色体和1对点状染色体。其中X染色体为J形,Y染色体为短棒状。基于核型比较的结果以及D．sinobscura亚组地理分布的资料,结合种间系统发育关系研究结果,认为D．luguensis可能保留了该亚组祖先种类的核型。D．sinobscum的核型(2n=12：2V,1J,2R,1D)可能由一个pre-“sinobscura-hubeiensis”谱系的一个分支通过臂间倒位演化而来,而D．hubeiensis的核型(2n=10：4V,1D)可能由该谱系的另一分支通过着丝粒融合(2对近端着丝粒常染色体的融合)而形成。推测在D．dianensis和近缘欧洲种D．subsilvestris(2n=12：3V,2R,1D)间、D．limingi和东亚近缘种D．tsukubaensis(2n=12：3V,2R,1D)间的物种分化过程中,可能有相似的染色体变异类型发生。     

Homologs of eleven loci on human chromosome 11 assigned to two owl monkey chromosomes

We localized 11 loci mapped to human chromosome 11 to two chromosomes, 4 and 19 of owl monkey karyotype VI (2n = 49/50), by the use of somatic cell hybrids. Furthermore, using in situ hybridization to chromosomes of two owl monkey karyotypes, the HSTF1 oncogene locus was precisely localized on homologs 19q (K-VI) and 2q (K-II). Comparative analysis of available gene-mapping data among human, mouse, and owl monkey chromosomes revealed a pattern of evolutionary change in a syntenic group on human chromosome 11. These structural changes could be explained as having derived from a pericentric inversion of human chromosome region 11cen----q13 and a translocation involving human region 11q22----qter during primate evolution.     

中国五种高山锄足蟾的核型、Ag-NORs和C-带的研究

作者用核型、Ag-NORs和C-带,对分布于川、滇两省的二属(齿突蟾、齿蟾)五种(胸腺齿突蟾、圆疣齿突蟾、凉北齿蟾、秉志齿蟾、疣刺齿蟾)锄足蟾作了属间和种间关系的比较分析,并讨论了它们的核型演化机制。结果表明:(1)齿突蟾和齿蟾两属间在核型和带型上都有明显的差异,演化途径主要的可能是含有重复DNA染色体片段的相互易位或臂间倒位;(2)属内不同种之间带型无显著差异,但某些对应染色体对间,其相对长度和臂比值差异明显,十分可能是常染色质片段的易位和臂间倒位所致;(3)凉北齿蟾有染色体数目变异多态现象;(4)五种锄足蟾均未发现异形性染色体。     

Reinvestigation of the chromosomes of a male owl monkey (Aotus trivirgatus) and its hybrid son

A male owl monkey, probably belonging to Aotus trivirgatus nigriceps, was found to have 51 chromosomes. Since the Y chromosome is lacking, the odd diploid number probably is the result of a Y-autosome translocation. However, there are two autosomes from different pairs that theoretically could contain the Y. This specimen produced a male young with a female A. trivirgatus griseimembra, having a karyotype with 54 chromosomes. The diploid number of the hybrid is 52, including 28 paired and 24 unpaired elements. Comparison of the paternal, maternal and hybrid karyotypes using Q- and C-banding techniques permit conclusions on the rearrangements (fusions, reciprocal translocations, inversions and insertions) that could possibly have led to the karyological differences between both subspecies.     

Clouded leopard (<Emphasis Type="Italic">Neofelis diardi</Emphasis>) predation on proboscis monkeys (<Emphasis Type="Italic">Nasalis larvatus</Emphasis>) in Sabah,Malaysia

In this study, we have reported two direct observations of individuals from a one-male group of proboscis monkeys (Nasalis larvatus) being killed by clouded leopards (Neofelis diardi) in the riverine forest along the Menanggul river, a tributary of the Kinabatangan river in Sabah, Malaysia. One of the two individuals was an infant female and the other was a juvenile female. Based on literature reviews and the observations reported here, we suggest that clouded leopard and crocodile might be significant potential predators of proboscis monkeys of any age or sex and that predation threats elicit the monkeys' anti-predator strategies. Moreover, the observations of the monkeys' behaviour when the group is attacked by a predator suggest that the adult males in one-male groups play an important role as protectors.     

亚洲疣猴与猕猴牙齿的比较

为了研究亚洲疣猴牙齿形态与功能适应性之间的关系,建立异速生长公式比较分析生活于同一大陆的猕猴。主成份分析用来分析来自异速生长公式的残差。结果表明:疣猴出乎意料地展示了比猕猴更小的门齿。导致此结果的可能原因是:疣猴与猕猴之间的食物差异性。但是,这种差异小于亚-非大陆种类。也就是说,在过去的500万年左右的时间里,生活于同一大陆的疣猴和猕猴已经产生了一些对环境和食性的趋同性。当每一个疣猴属分别与猕猴进行比较时,它们之间的差异性揭示了地理分布的差异。金丝猴(Rhinopithecus)和长尾叶猴(Semnopithecus)具有比其他疣猴发达的臼齿。欧氏距离的结果说明疣猴和猕猴牙齿的差异性揭示了它们在系统发育方面的关系。     

The feeding ecology and activity budget of proboscis monkeys

A group of proboscis monkeys (Nasalis larvatus) consisting of an alpha‐male, six adult females, and several immatures was observed from May 2005–2006. We collected over 1,968 hr of focal data on the adult male and 1,539 hr of focal data on the six females in a forest along the Menanggul River, Sabah, Malaysia. Availability and seasonal changes in plant species consumed by the focal monkeys were determined by vegetation surveys carried out across an area of 2.15 ha along 200–500 m trails in riverine forest. A total of 188 plant species were consumed by the focal monkeys. The activity budget of members of our study group was 76.5% resting, 19.5% feeding, and 3.5% moving. Young leaves (65.9%) and fruits (25.9%) accounted for the majority of feeding time. Over 90% of fruit feeding involved the consumption of unripe fruits and in the majority of case both the fruit flesh and seeds were eaten. Although fruit eating was rare in some months, during other times of the year time fruit feeding exceeded the time devoted to young leaves. We found that monthly fruit availability was positively related to monthly fruit eating and feeding activity, and seasonal fluctuations in dietary diversity were significantly affected by fruit eating. These results suggest that fruit availability and fruit‐eating behaviors are key factors that influence the activity budget of proboscis monkeys. Earlier assumptions that colobine monkeys are obligate folivores do not apply well to proboscis monkeys and certain other colobines. Our findings may help contribute to a better understanding of the dietary adaptations and feeding ecology of Asian colobines. Am. J. Primatol. 71:478–492, 2009. © 2009 Wiley‐Liss, Inc.