<Emphasis Type="Italic">Dicrogaster perpusilla</Emphasis> Looss, 1902 <Emphasis Type="Italic">sensu</Emphasis> Sarabeev &; Balbuena (Digenea: Haploporidae): a note of caution

Sarabeev & Balbuena (2003) considered Dicrogaster perpusilla Looss, 1902 and D. contracta Looss, 1902 (Digenea: Haploporidae) synonymous. They designated a neotype for the type-species, D. perpusilla, from a sample of specimens ex Chelon labrosus off West Thurrock, UK. The morphology of the material (three specimen lots) studied by these authors was re-examined in detail and compared with their data. The material labelled ‘D. perpusilla’ from off West Thurrock, from which the neotype specimen was selected, consists of 14 specimens; of these one might belong to Haploporus Looss, 1902 and one to Haplosplanchnus Looss 1902. A well-developed genital atrium was observed in 11 of the 12 remaining specimens, and they all possess large saccular caeca and a vitellarium consisting of two groups of loosely coalesced follicles rather than two compact masses. These features suggest that the 12 specimens of this lot may belong to Saccocoelium Looss, 1902, but the state of the material does not permit its reliable identification. The specimen designated by Sarabeev & Balbuena (2003) as the neotype of D. perpusilla represents a neogravid dorso-laterally mounted specimen and is unrecognisable. Although five of the six voucher specimens of these authors may represent Dicrogaster spp., the poor state of this material does not allow its accurate identification. The metrical data obtained from this voucher material indicate that juvenile and laterally mounted specimens have been used in the comparisons upon which the synonymy of D. perpusilla and D. contracta was suggested. The overall conclusion of the study is that the synonymy of D. contracta and D. perpusilla proposed by Sarabeev & Balbuena (2003) is based on questionable material. Since the neotype of D. perpusilla is unrecognisable, and a number of qualifying conditions of the ICZN in its designation were not met, the usage of the original conception of the type-species of Dicrogaster given by Looss (1902) is recommended.     

A partial skeleton of <Emphasis Type="Italic">Cetorhinus parvus</Emphasis> Leriche, 1910 (Chondrichthyes,Cetorhinidae) from the Oligocene of Germany

A partial skeleton of a shark was found in the Frauenweiler clay pit near Rauenberg (Oligocene, Rupelian; Baden-Württemberg, S. Germany). The shark is identified as Cetorhinus parvus Leriche 1910. One tooth, vertebrae, dermal denticles and most of the filter apparatus of the juvenile specimen are described and illustrated. A terminology is introduced for the gill raker elements of the genus Cetorhinus to compare C. parvus and C. maximus.     

The type locality of <Emphasis Type="Italic">Pan troglodytes vellerosus</Emphasis> (Gray, 1862), and implications for the nomenclature of West African chimpanzees

We show that, in 1862, Richard Burton collected the type specimen of Pan troglodytes vellerosus not on Mount Cameroon, as has been generally assumed, but in Gabon. Therefore, P. t. vellerosus is not the correct name for the chimpanzee population of western Cameroon and southern Nigeria, if that population is taxonomically distinct. As First Reviser, we choose the name Pan troglodytes ellioti for this population of chimpanzees, based on Anthropopithecus ellioti named by Matschie [Matschie P (1914) Neue Affen aus Mittelafrika. Sitzungsber Ges Naturforsch Freunde Berlin 1914:323–342] from a specimen in the Humboldt Museum, Berlin, collected in Bascho (=Basho), Cameroon, and given to the museum in 1905.     

A new species of <Emphasis Type="Italic">Penopus</Emphasis> (Teleostei: Ophidiidae) from the Ryukyu Trench,the West Pacific,with remarks on <Emphasis Type="Italic">Penopus microphthalmus</Emphasis>

The bathyal genus Penopus (Ophidiidae) is revised based on 23 specimens. One specimen from the Ryukyu Trench represents a new species, Penopus japonicus. The remaining 22 specimens were found on both sides of the Atlantic Ocean, and neither 28 meristic and morphometric characters nor several morphological characters show any differences between the two populations. This supports Séret (1988), who considered Penopus macdonaldi Goode and Bean 1896 a junior synonym of Penopus microphthalmus (Vaillant 1888). The new Japanese species can be separated from the Atlantic species by having fewer rays in the dorsal (117 vs. 135–158) and anal (89 vs. 106–122) fins, the squamation of the head restricted to the middle part of the preopercle versus the squamation covering the dorsum, preopercle and the opercle in part, a distinct spine behind the posterior nostril versus the spine hardly visible and 9 spines on the hind margin of the preopercle versus 4–7 spines.     

A Voucher Specimen for <Emphasis Type="Italic">Macaca munzala</Emphasis>: Interspecific Affinities,Evolution, and Conservation of a Newly Discovered Primate

Sinha, A., Datta, A., Madhusudan, M. D., & Mishra, C. (2005. Macaca munzala: A new species from western Arunachal Pradesh, northeastern India. International Journal of Primatology, 26, 977–989) discovered Arunachal macaques (Macaca munzala), a species new to science, in the eastern Himalaya of Arunachal Pradesh in northeastern India. They depicted the holotype and paratypes of the species in photographs, and a specimen of the species had been unavailable for preservation and examination. In March 2005, we obtained an entire specimen of an adult male Macaca munzala, which we propose as a voucher specimen for the species. We provide detailed morphological and anatomical measurements of the specimen and examine its affinities with other macaques. Macaca munzala appears to be unique among macaques in craniodental size and structure, baculum, and aspects of caudal structure, while exhibiting affinities with the other members of the sinica-group to which it belongs. We summarize our insights on the origins and phylogeny of Macaca munzala. Finally, we review the current conservation status of the macaques, which are threatened by extensive hunting in the only 2 districts of Arunachal Pradesh where they are documented to occur.     

Redescription and designation of a neotype for <Emphasis Type="Italic">Aphthalmichthys kuro</Emphasis> Kuroda 1947, and its placement in <Emphasis Type="Italic">Callechelys</Emphasis> (Anguilliformes: Ophichthidae)

Aphthalmichthys kuro, described by Kuroda (1947) based on a specimen from Suruga Bay, Japan, is referred to Callechelys (family Ophichthidae, subfamily Ophichthinae). It differs from its congeners in its vertebral number (142–146), tail length (2.0–2.1 in TL), and coloration (brownish black). The holotype is lost; we herein designate a neotype and redescribe and illustrate the species based on 5 specimens from Japan and 2 from Taiwan.     

<Emphasis Type="Italic">Democricetodon</Emphasis> and <Emphasis Type="Italic">Megacricetodon</Emphasis> (Mammalia,Cricetidae) from the Miocene of Sandelzhausen,Southern Germany

The cricetid species Democricetodon gracilis (Fahlbusch, 1964), Democricetodon mutilus (Fahlbusch, 1964), Megacricetodon bavaricus (Fahlbusch, 1964), and Megacricetodon minor (Lartet, 1851) from Sandelzhausen (Early/Middle Miocene boundary, MN5, Southern Germany) are represented by more than 2,000 molars providing substantial data on the variability in sizes and on variation in morphologies. Temporal and spatial distributions of these species indicate that they are probably immigrants in SE Germany, originating from south-eastern or more southern areas. Except for M. minor, whose origin is not clear and could be regarded as an immigrant from more eastern areas. Using the length of the mesoloph in the second upper molars as an indicator of habitat, D. gracilis and M. minor had a preference for a humid habitat, D. mutilus and M. bavaricus a preference for drier habitats.      

Phylogenetic Position of <Emphasis Type="Italic">Corchoropsis</Emphasis> Siebold &; Zucc. (Malvaceae s.l.) Inferred from Plastid DNA Sequences

Recent phylogenetic research suggests that Malvaceae s.l. comprises formerly Tiliaceae, Byttneriaceae, Bombacaceae, and Sterculiaceae. Corchoropsis is traditionally included in Tiliaceae or Sterculiaceae and is distributed in China, Korea, and Japan. One to three species have been recognized for this genus. Phylogenetic relationships among the Malvacean taxa have been intensively studied with molecular data, and the evolution of their morphological characteristics has been re-interpreted accordingly. However, no Corchoropsis species have been included for their phylogenetic position. Here, three chloroplast coding regions—rbcL, atpB, and ndhF, from Corchoropsis psilocarpa and Corchoropsis crenata—were amplified and sequenced, then compared with other Malvacean taxa. This analysis of the three plastid gene sequences now places Corchoropsis species in Dombeyoideae, as previously proposed by Takeda (Bull Misc Inform Kew 365, 1912), Tang (Cathaya 4:131–150, 1992), and Bayer and Kubitzki (2003). Within Dombeyoideae, Corchoropsis forms a strongly supported sister relationship with the Dombeya–Ruizia clade.     

Taxonomic status and type specimens of <Emphasis Type="Italic">Platycephalus bataviensis</Emphasis> Bleeker 1853 (Teleostei: Platycephalidae)

Taxonomic status and type specimens of Platycephalus bataviensis Bleeker 1853, described based on two syntypes (110 and 140 mm TL) from Batavia (= Jakarta), are discussed. Four platycephalid specimens have been recognized as possible syntype(s) of P. bataviensis. Of them, a specimen of 140.5 mm TL deposited at Muséum National d’Histoire Naturelle, Paris, identified as Inegocia japonica, is regarded to be the larger syntype and is designated as the lectotype of P. bataviensis in this study, while the paralectotype of the species is not identified. As a result, P. bataviensis becomes a junior synonym of I. japonica.     

Morphological and molecular analysis of <Emphasis Type="Italic">Ornithonyssus</Emphasis> spp. (Acari: Macronyssidae) from small terrestrial mammals in Brazil

Based on chaetotaxy of the dorsal shield, the taxonomic status of many species of Ornithonyssus has been considered invalid, resulting in the synonymy of all Brazilian Ornithonyssus from small terrestrial wild mammals into one of the following four species: Ornithonyssus bacoti (Hirst, 1913), Ornithonyssus matogrosso (Fonseca, 1954), Ornithonyssus pereirai (Fonseca, 1935) or Ornithonyssus wernecki (Fonseca, 1935). Despite the revision of this genus in 1980, including all known species worldwide, the knowledge of Ornithonyssus in Brazil has not progressed for more than 40 years. Considering the potential importance of these haematophagous mites in transmitting rickettsial disease agents to animals and humans, we have revised Ornithonyssus species collected from small mammals in Brazil by means of morphological and molecular studies. Types and other material deposited in the Acari Collection of the Instituto Butantan (IBSP) were examined in addition to recently collected specimens. Morphological and genetic analysis of the 16S rDNA mitochondrial gene revealed that small terrestrial mammals in Brazil are parasitized by six species of Ornithonyssus mites: Ornithonyssus brasiliensis (Fonseca, 1939), O. matogrosso, O. monteiroi (Fonseca, 1941), O. pereirai, O. vitzthumi (Fonseca, 1941), and O. wernecki. An illustrated key to females of the valid Brazilian species of Ornithonyssus is included, based on optical and scanning electron microscopy.     

Correcting Misperceptions about the History of <Emphasis Type="Italic">Castanea</Emphasis> Stands in <Emphasis Type="Italic">Satoyama</Emphasis> in Japan

Correcting Misperceptions about the History of Castanea Stands in Satoyama in Japan. Mistaken ideas about the naturalness of past and present landscapes are widespread in diverse cultures and in the scientific literature, and many of these ideas are only now being seriously challenged by current research (e.g., Erickson 2006; Fairhead and Leach 1996; Hall 1998; Ramankutty and Foley 1999; Willis et al. 2004). For example, the chestnut, Castanea crenata, has long been an important tree in Japanese culture, which has been cultivated, among other things, for its much loved edible nut and its valuable timber. Today, the widely-held view in Japan, which also appears in the scholarly and popular literature, is that in the past Castanea stands covered a large area throughout Japan, and these stands only disappeared because of economic development, especially in association with railway construction. Otaru, Hokkaido, is one of the places where people believe Castanea stands covered a large area and were deforested only recently. Local people in Otaru believe that the stand in Temiya Park has existed since the Jomon Period. For a more accurate historical perspective on Japanese forestation, we have performed pollen analysis to clarify the timing of the introduction of the Castanea tree into Otaru region and to reveal the history of this specific Castanea stand in Temiya Park. The results indicate that Castanea was first found in Otaru region 7100 B.P., but that it was not cultivated extensively until recently. Based on our study, and on data from this area dating to the late 19th century, we concluded instead that the Castanea stand we studied in Temiya Park, Otaru, was established after the mid-20th century. We believe the results of this study are applicable to Castanea stands in other parts of Japan as well.     

Molecular Systematics of Chipmunks (<Emphasis Type="Italic">Neotamias</Emphasis>) Inferred by Mitochondrial Control Region Sequences

Western chipmunks (Neotamias) exhibit a complex geographical distribution and can vary by minute morphological differences. This has lead to confusion around the taxonomy and evolutionary history of this group. The main focus of this molecular study was to infer taxonomic relationships within Neotamias, especially at the tips of the tree. Sequences of the complete control region for 16 species of chipmunks (Tamias, Neotamias) were analyzed independently and in combination with previously published sequences of two mitochondrial genes, cytochrome b and cytochrome oxidase II. The control region data set corroborated the findings of Piaggio and Spicer (2001) in finding five discrete clades, while also providing stronger bootstrap support for most terminal branches. Analysis of individual mitochondrial genes revealed that not all genes have the same phylogenetic signal and when analyzed in combination, this incongruence amongst genes is resolved.     

Species delimitation in sharpnose sharks (genus <Emphasis Type="Italic">Rhizoprionodon</Emphasis>) in the western Atlantic Ocean using mitochondrial DNA

Despite Springer’s (1964) revision of the sharpnose sharks (genus Rhizoprionodon), the taxonomic definition and ranges of Rhizoprionodon in the western Atlantic Ocean remains problematic. In particular, the distinction between Rhizoprionodon terraenovae and R. porosus, and the occurrence of R. terraenovae in South American waters are unresolved issues involving common and ecologically important species in need of fishery management in Caribbean and southwest Atlantic waters. In recent years, molecular markers have been used as efficient tools for the detection of cryptic species and to address controversial taxonomic issues. In this study 415 samples of the genus Rhizoprionodon captured in the western Atlantic Ocean from Florida to southern Brazil were examined for sequences of the COI gene and the D-loop and evaluated for nucleotide differences. The results on nucleotide composition, AMOVA tests, and relationship distances using Bayesian-likelihood method and haplotypes network, corroborates Springer’s (1964) morphometric and meristic finding and provide strong evidence that supports consideration of R. terraenovae and R. porosus as distinct species.     

Class 1 KNOX Gene Expression Supports the <Emphasis Type="Italic">Selaginella</Emphasis> Rhizophore Concept

The spikemoss is marked by the unique root-producing pleurogeous rhizophore as well as the lycophytic microphyll. Imaichi and Kato (Bot Mag Tokyo 102:369–380, 1989; Am J Bot 78:1694–1703, 1991) revealed that the exogenous developmental process in the rhizophore is clearly distinguishable from the developmental process in the endogenous root, argued that the axial organ could be coordinate with other fundamental organs including the root and stem, and demonstrated the “rhizophore concept.” In this paper, we report on the expression pattern of the spikemoss Selaginella class 1 KNOX gene, SuKNOX1, in the rhizophore. We show that the SuKNOX1 mRNA is specifically accumulated at the tip of the rhizophore as well as the shoot apical apex, but not in the root tip. This result supports the “rhizophore concept” at the molecular level.     

<Emphasis Type="Italic">Anisakis nascettii</Emphasis> n. sp. (Nematoda: Anisakidae) from beaked whales of the southern hemisphere: morphological description,genetic relationships between congeners and ecological data

A new anisakid nematode, Anisakis nascettii n. sp., is described from beaked whales Mesoplodon spp. off the coast of New Zealand and South Africa. Morphological and molecular (allozymes and mtDNA cox2 sequence) data were used for diagnostic and identification purposes. Among the 19 allozymes studied, 10 were found to be unique and characteristic for A. nascettii n. sp. Analysis of allozymes demonstrated reproductive isolation from A. ziphidarum Paggi, Nascetti, Webb, Mattiucci, Cianchi & Bullini, 1998 and mtDNA cox2 sequences depict this Anisakis species as a distinct and unique entity. Key morphological diagnostic traits for A. nascettii with respect to the genetically closely related species A. ziphidarum include: spicule length, the spicule/body length ratio, the arrangement of the caudal papillae and the shape of the plectanes of the adult males. Genetic data confirmed that Anisakis sp. A of Pontes et al. (2005), which was partly described by Iglesias et al. (2008), and Anisakis sp. of Valentini et al. (2006) are conspecific with A. nascettii. Both molecular and morphological data indicate that the new species belongs to the ‘ziphidarum-group’; however, it is genetically very distinct from A. ziphidarum (D _Nei  = 0.69, K2P = 0.09), as well as from all of the previously genetically characterised Anisakis spp. All tree topologies inferred by different methods (MP, NJ and Bayesian) support the finding that A. nascettii n. sp. and A. ziphidarum are sister-species. It is also confirmed that A. nascettii n. sp. is, at the adult stage, a parasite of beaked whales of the genus Mesoplodon, whereas, as a larva, it has been identified from the squid Moroteuthis ingens Smith. Furthermore, Mesoplodon bowdoini Andrews represents a new host record for A. ziphidarum. The parallelism between the clade formed by these two anisakine taxa, i.e. A. ziphidarum and A. nascettii, and that formed by their definitive hosts further supports the hypothesis of host–parasite co-evolutionary relationships, as previously suggested for Anisakis spp. and their cetacean hosts.     

Accuracy of dominant markers for estimation of relatedness and heritability in an experimental stand of Prosopis alba (Leguminosae)

The estimation of genetic components of phenotypic variance is based on the resemblance between relatives. In natural populations of most forest tree species without genealogical information, a possible alternative approach is the use of relatedness estimates obtained indirectly from molecular marker data. Heritability (h ²) is then estimated from the covariance of estimated relatedness and phenotypic resemblance. In a stand of Prosopis alba planted in 1991 in Argentina, relatedness was estimated for all individual pairs of trees by means of the information proceeding from 128 dominant markers (57 AFLPs and 71 ISSRs) and compared with estimates obtained from six microsatellite loci previously studied. We empirically compared the accuracy of different relatedness estimators based on dominant markers proposed by Lynch and Milligan (Mol Ecol 3:91–99, 1994), Hardy (Mol Ecol 12:1577–1588, 2003), Wang (Mol Ecol 13:3169–3178, 2004), and Ritland (Mol Ecol 14:3157–3165, 2005). Heritabilities of 13 quantitative traits were then estimated from the regression of pairwise phenotypic distances on pairwise relatedness according to Ritland (Genet Res 67:175–185, 1996a). Relatedness inferred from molecular markers was in all cases significantly correlated with actual relatedness, although Ritland's estimator showed the highest bias but the lowest variance. Dominant marker-based h ² estimates were evidently downwards biased and showed poor correlation with those based on family records. In conclusion, the use of dominant molecular markers evidently produces much greater underestimates of h ² than from using co-dominant ones, attributable to the lower accuracy in the indirect estimation of relatedness coefficient. Many traits with enough genetic variability as to respond readily to selection would remain undetected; only those with very high heritability would show significant h ² estimates.     

The rat Ruby (<Emphasis Type="Italic">R</Emphasis>) locus is <Emphasis Type="Italic">Rab38</Emphasis>: identical mutations in Fawn-hooded and Tester-Moriyama rats derived from an ancestral Long Evans rat sub-strain

Hermansky-Pudlak syndrome (HPS) is a group of rare, recessive disorders in which oculocutaneous albinism, progressive pulmonary fibrosis, bleeding diathesis, and other abnormalities result from defective biogenesis of multiple cytoplasmic organelles. Seven different HPS genes are known in humans; in mouse, at least 16 loci are associated with HPS-like mutant phenotypes. In the rat, only two HPS models are known, Fawn-hooded (FH) and Tester Moriyama (TM), non-complementing strains in which HPS-like hypopigmentation and platelet storage pool deficiency result from a mutation of the Ruby (red eyed dilution; R) locus on Chromosome (Chr) 1. We have identified the R locus as the Rab38 gene, establishing that rat R is homologous to mouse chocolate (cht). Further, we show that FH and TM rats have identical Rab38 Met1Ile mutations, occurring on an identical Chr 1 marker allele haplotype, indicating that these two strains derive from a common ancestor. This ancestor appears to have been a sub-strain of the outbred Long Evans (LE) strain, and several modern LE sub-strains carry the Rab38 Met1Ile R mutation on the same Chr 1 marker haplotype. These findings have significant implications for the many past and ongoing studies that involve the FH and LE-derivative rat strains. Hermansky-Pudlak syndrome (HPS; MIM 203300) is a group of autosomal recessive diseases in which oculocutaneous albinism (OCA), progressive and fatal pulmonary fibrosis, and bleeding diathesis due to platelet storage pool deficiency result from defects in the biogenesis of specific cytoplasmic organelles and granules: melanosomes, lysosomes, and platelet dense granules (reviewed in Spritz 1999, 2000; Spritz et al. 2003). In humans, seven different HPS genes are known (Oh et al. 1996; DellAngelica et al. 1999; Anikster et al. 2001; Suzuki et al. 2002; Li et al. 2003; Zhang et al. 2003). In the mouse, at least 16 loci associated with HPS-like mutant phenotypes are known, seven of which are homologous to the human HPS loci (Swank et al. 1998; Bennett and Lamoreux 2003). The nucleotide sequence data reported in this paper have been submitted to GenBank and have been assigned the accession number AY425759. (Naoki Oiso) Present address: Department of Dermatology, Saiseikai Tondabayashi Hospital, Tondabayashi, Osaka 584-0082, Japan.