Earliest fossil record of the Certhioidea (treecreepers and allies) from the early Miocene of Germany

A complete tarsometatarsus of a passerine bird from the early Miocene (MN 3) of Petersbuch (Bavaria, Germany) is identified as an extinct representative of the climbing Certhioidea, i.e., a clade comprising treecreepers (Certhiidae), nuthatches and wallcreepers (Sittidae). The fossil specimen represents the so far earliest evidence of a representative of the Certhioidea and is described as †Certhiops rummeli gen. et sp. nov. Similarities to other climbing passerines are discussed.     

Experimental alteration of limb posture in the chicken (Gallus gallus) and its bearing on the use of birds as analogs for dinosaur locomotion

Extant birds represent the only diverse living bipeds, and can be informative for investigations into the life‐history parameters of their extinct dinosaurian relatives. However, morphological changes that occurred during early avian evolution, including the unique adoption of a nearly horizontal femoral orientation associated with a shift in center of mass (CM), suggest that caution is warranted in the use of birds as analogs for nonavian dinosaur locomotion. In this study, we fitted a group of white leghorn chickens (Gallus gallus) with a weight suspended posterior to the hip in order to examine the effects on loading and morphology. This caused a CM shift that necessitated a change in femoral posture (by 35° towards the horizontal, P < 0.001), and resulted in reorientation of the ground reaction force (GRF) vector relative to the femur (from 41° to 82°, P < 0.001). Despite similar strain magnitudes, an overall increase in torsion relative to bending (from 1.70 to 1.95 times bending, P < 0.001) was observed, which was weakly associated with a tendency for increased femoral cross‐sectional dimensions (P = 0.1). We suggest that a relative increase in torsion is consistent with a change in femoral posture towards the horizontal, since this change increases the degree to which the bone axis and the GRF vector produce mediolateral long‐axis rotation of the bone. These results support the hypothesis that a postural change during early avian evolution could underlie the allometric differences seen between bird and nonavian dinosaur femora by requiring more robust femoral dimensions in birds due to an increase in torsion. J. Morphol. 240:237–249, 1999. © 1999 Wiley‐Liss, Inc.     

Living Monoplacophora: morphological conservatism or recent diversification?

Kano, Y., Kimura, S., Kimura, T. & Warén, A. (2012) Living Monoplacophora: morphological conservatism or recent diversification? —Zoologica Scripta, 41, 471–488. The molluscs of the class Monoplacophora are classic and probably the most striking case of a ‘living fossil’ in the deep sea. Until the discovery of the first living specimens in 1950s, the group was thought to be extinct since the Devonian period, almost 400 million years ago. Morphological conservatism over a long span of time in a ‘living‐fossil’ lineage may theoretically result in distant but closely resembling taxa, and this idea apparently led some authors to recognise as many as six families and three superfamilies for less than three dozen living monoplacophoran species. However, no genetic or fossil data have been available regarding the history of their diversification. Here we describe Veleropilina seisuimaruae sp. n., the first member of the class from the north‐western Pacific, based on the shell, radular and anatomical characteristics. Phylogenetic analyses of 6‐kb DNA sequences estimate that the divergence of V. seisuimaruae and Laevipilina hyalina, the only other monoplacophoran available for genetic studies, dates back only to the Late Cretaceous, despite their significant morphological differences among the living members of the class. The recent Monoplacophora might have radiated fairly recently from a cryptic lineage with ordinary rates of morphological evolution, possibly after the global deep‐sea anoxia at the Cenomanian/Turonian boundary.     

Morphology,diet, and stable carbon isotopes: On the diet of Theropithecus and some limits of uniformitarianism in paleoecology

Geladas were long supposed to be the only living primates feeding almost entirely on graminoids and accordingly display dramatic dental and manual adaptive traits. A recent study of Theropithecus gelada, the first in a relatively undisturbed habitat, revealed a more diverse diet, also incorporating large quantities of forbs. The peculiar adaptive traits of T. gelada are also observed in extinct Theropithecus as early as 3.7 Ma. Stable carbon isotopic data of extinct Theropithecus from eastern Africa indicate that specimens older than 3 Ma consumed a significant proportion of C₃ plants (on average ca. 40% of total food intake) whereas specimens younger than 2 Ma consumed more C₄ plants (on average ca. 80%). Recent paleobotanical evidence suggests that C₃ herbaceous plants were still present in non‐negligible proportions in Plio‐Pleistocene lowland tropical ecosystems. Together, the shared morphological adaptive traits of extant and extinct Theropithecus and the varied diets of extant T. gelada suggest that the paleodiets of Theropithecus may have been dominated by herbaceous plants, comprising both C₃ forbs and graminoids and C₄ graminoids. The changes in stable carbon isotopes could correspond to a replacement of C₃ plants by C₄ plants within the herbaceous strata rather than a shift from C₃ woody vegetation to C₄ graminoids. This synthesis highlights the need for a more exhaustive knowledge of the ecology of extant species to achieve meaningful paleodietary and paleoenvironmental reconstructions. A strong selectivity for food resources that are rare in the landscapes (as in T. gelada) should also be considered when interpreting stable carbon isotopes of extinct African mammals (and notably hominids).     

Systematics and evolution of the Pan‐Alcidae (Aves,Charadriiformes)

Puffins, auks and their allies in the wing‐propelled diving seabird clade Pan‐Alcidae (Charadriiformes) have been proposed to be key pelagic indicators of faunal shifts in Northern Hemisphere oceans. However, most previous phylogenetic analyses of the clade have focused only on the 23 extant alcid species. Here we undertake a combined phylogenetic analysis of all previously published molecular sequence data (～ 12 kb) and morphological data (n = 353 characters) with dense species level sampling that also includes 28 extinct taxa. We present a new estimate of the patterns of diversification in the clade based on divergence time estimates that include a previously vetted set of twelve fossil calibrations. The resultant time trees are also used in the evaluation of previously hypothesized paleoclimatic drivers of pan‐alcid evolution. Our divergence dating results estimate the split of Alcidae from its sister taxon Stercorariidae during the late Eocene (～ 35 Ma), an evolutionary hypothesis for clade origination that agrees with the fossil record and that does not require the inference of extensive ghost lineages. The extant dovekie Alle alle is identified as the sole extant member of a clade including four extinct Miocene species. Furthermore, whereas an Uria + Alle clade has been previously recovered from molecular analyses, the extinct diversity of closely related Miocepphus species yields morphological support for this clade. Our results suggest that extant alcid diversity is a function of Miocene diversification and differential extinction at the Pliocene–Pleistocene boundary. The relative timing of the Middle Miocene climatic optimum and the Pliocene–Pleistocene climatic transition and major diversification and extinction events in Pan‐Alcidae, respectively, are consistent with a potential link between major paleoclimatic events and pan‐alcid cladogenesis.     

Evaluation of two visual birdscarers,the Peaceful Pyramid® and an eye‐spot balloon,in two vineyards

Abstract

The effectiveness of a visual birdscarer, the Peaceful Pyramid®, relative to a much‐cheaper eye‐spot balloon was investigated experimentally in two vineyards in Canterbury, New Zealand. Monitoring of bird damage to natural bunches of Riesling grapes within vineyard blocks showed that the rate of starling (Sturnus vulgaris) damage to the crop was reduced significantly by the balloon relative to pyramid and control plots. Nevertheless, after 24 days of monitoring, birds in the balloon plot had damaged 75% of the grapes, respectively (cf. 84% in the pyramid plot). In a second trial, clusters of table grapes were attached to vineyard wire at a Lincoln vineyard. The balloon and pyramid both reduced bird damage to clusters within 15 m of the device, but had no measurable effect on clusters further away. We conclude that neither device would provide growers with any economically significant reduction in grape damage. This study highlights the importance of undertaking quantitative assessments of the numerous bird‐scaring technologies presently available to growers.     

A new basal ornithuromorph bird (Aves: Ornithothoraces) from the Early Cretaceous of China with implication for morphology of early Ornithuromorpha

Ornithuromorpha is the most derived avian group in the Early Cretaceous, advanced members of which encompass all living birds (Neornithes). Here we report on a new basal ornithuromorph bird, Bellulia rectusunguis gen. et sp. nov., represented by a nearly complete skeleton from the Early Cretaceous Jehol Biota in northeastern China. A comprehensive phylogenetic analysis resolved the new taxon in a basal position that is only more derived than Archaeorhynchus and Jianchangornis among ornithuromorphs, increasing the morphological diversity of basal ornithuromorphs. The new specimen has a V‐shaped furcula with a short hypocleidium, a feature otherwise known only in Schizooura among Cretaceous ornithuromorphs. We discuss the implications of the new taxon on the evolution of morphology of primitive ornithuromorphs, particularly of pectoral girdle, sternum and limb proportion pertaining to powered flight. The preserved gastroliths and pedal morphology indicate herbivory and lakeshore adaption for this new species. © 2015 The Linnean Society of London     

Complete mitochondrial genomes of eleven extinct or possibly extinct bird species

Natural history museum collections represent a vast source of ancient and historical DNA samples from extinct taxa that can be utilized by high‐throughput sequencing tools to reveal novel genetic and phylogenetic information about them. Here, we report on the successful sequencing of complete mitochondrial genome sequences (mitogenomes) from eleven extinct bird species, using de novo assembly of short sequences derived from toepad samples of degraded DNA from museum specimens. For two species (the Passenger Pigeon Ectopistes migratorius and the South Island Piopio Turnagra capensis), whole mitogenomes were already available from recent studies, whereas for five others (the Great Auk Pinguinis impennis, the Imperial Woodpecker Campehilus imperialis, the Huia Heteralocha acutirostris, the Kauai Oo Moho braccathus and the South Island Kokako Callaeas cinereus), there were partial mitochondrial sequences available for comparison. For all seven species, we found sequence similarities of >98%. For the remaining four species (the Kamao Myadestes myadestinus, the Paradise Parrot Psephotellus pulcherrimus, the Ou Psittirostra psittacea and the Lesser Akialoa Akialoa obscura), there was no sequence information available for comparison, so we conducted blast searches and phylogenetic analyses to determine their phylogenetic positions and identify their closest extant relatives. These mitogenomes will be valuable for future analyses of avian phylogenetics and illustrate the importance of museum collections as repositories for genomics resources.     

Lineages with long durations are old and morphologically average: an analysis using multiple datasets

Lineage persistence is as central to biology as evolutionary change. Important questions regarding persistence include: why do some lineages outlive their relatives, neither becoming extinct nor evolving into separate lineages? Do these long‐duration lineages have distinctive ecological or morphological traits that correlate with their geologic durations and potentially aid their survival? In this paper, I test the hypothesis that lineages (species and higher taxa) with longer geologic durations have morphologies that are more average than expected by chance alone. I evaluate this hypothesis for both individual lineages with longer durations and groups of lineages with longer durations, using more than 60 published datasets of animals with adequate fossil records. Analyses presented here show that groups of lineages with longer durations fall empirically into one of three theoretically possible scenarios, namely: (1) the morphology of groups of longer duration lineages is closer to the grand average of their inclusive group, that is, their relative morphological distance is smaller than expected by chance alone, when compared with rarified samples of their shorter duration relatives (a negative group morpho‐duration distribution); (2) the relative morphological distance of groups of longer duration lineages is no different from rarified samples of their shorter duration relatives (a null group morpho‐duration distribution); and (3) the relative morphological distance of groups of longer duration lineages is greater than expected when compared with rarified samples of their shorter duration relatives (a positive group morpho‐duration distribution). Datasets exhibiting negative group morpho‐duration distributions predominate. However, lineages with higher ranks in the Linnean hierarchy demonstrate positive morpho‐duration distributions more frequently. The relative morphological distance of individual longer duration lineages is no different from that of rarified samples of their shorter duration relatives (a null individual morpho‐duration distribution) for the majority of datasets studied. Contrary to the common idea that very persistent lineages are special or unique in some significant way, both the results from analyses of long‐duration lineages as groups and individuals show that they are morphologically average. Persistent lineages often arise early in a group's history, even though there is no prior expectation for this tendency in datasets of extinct groups. The implications of these results for diversification histories and niche preemption are discussed.     

On the identification of feather structures in stem-line representatives of birds: evidence from fossils and actuopalaeontology

Dinosaurs with fossilized filamentous integument structures are usually preserved in a highly flattened state. Several different feather types have been described on this basis, but the two-dimensional preservation of specimens during fossilization makes the identification of single feather structures difficult due to overlapping feather structures in vivo. Morphological comparison with the diversity of recent feather types is therefore absolutely vital to avoid misinterpretation. To simulate the preservation process, a cadaver of recent Carduelis spinus (European siskin) was flattened in a printing press. Afterwards, the structure of the plumage was compared with the morphology of a single body feather from the same specimen. In comparison with the single feather, the body plumage of the flattened bird looked rather filamentous. It was almost impossible to identify single structures, and in their place, various artefacts were produced. The investigation of plumage in a specimen of the Mesozoic bird Confuciusornis sanctus reveals similar structures. This indicates that flattening of specimens during fossilization amplifies the effect of overlapping among feathers and also causes a loss of morphological detail which can lead to misinterpretations. The results are discussed in connection with some dubious feather morphologies in recently described theropods and basal birds. Based on recent feather morphology, the structure of so-called proximal ribbon-like pennaceous feathers (PRPFs) found in many basal birds is reinterpreted. Furthermore, the morphology of a very similar-looking feather type found in the forelimb and tail of an early juvenile oviraptorosaur is discussed and diagnosed as the first feather generation growing out of the feather sheath. Thus, the whole plumage of this theropod might represent neoptile plumage.     

A new peculiar dinosaur egg,Sankofa pyrenaica oogen. nov. oosp. nov. from the Upper Cretaceous coastal deposits of the Aren Formation,south‐central Pyrenees,Lleida, Catalonia,Spain

Abstract: A new type of small, ovoid dinosaur egg, Sankofa pyrenaica oogen. nov. oosp. nov., with a prismatic type eggshell is described from upper Cretaceous (upper Campanian–Maastrichtian) deposits of the Montsec area, South Pyrenean Central Unit, Lleida, Catalonia, Spain. This egg type was sub‐vertically laid in only two rich monospecific sites of a single stratigraphic layer from coastal deposits of the Aren Formation, interpreted as an emerged beach ridge of a barrier island – lagoon depositional system. The size and shape of these eggs with their asymmetric poles are roughly similar to modern hen eggs, which is unusual in the Cretaceous fossil egg record. Its phylogenetic position clusters with bird and Troodontid eggs. A morphospace analysis of egg shapes shows the similarity of the new egg to a Campanian fossil bird egg from Argentina, both being intermediate between modern‐bird eggs and extinct nonavian theropod eggs. However, the eggshell microstructure of Sankofa pyrenaica differs from that of bird eggs in its incipient squamatic texture. It has a peculiar pattern of interlocking small crystals in the middle of the palisade layer, instead of the thick squamatic structure commonly present in modern avian eggshells. This new egg type is attributed to a small theropod, probably with a single oviduct like birds and whose mosaic distribution of features is a combination between that of birds and nonavian theropods. This enhances the arguments supporting the close phylogenetic relationships between both groups.     

Postcranial morphology of the extinct caviine rodent Microcavia criolloensis (late Pleistocene,South America)

A comparative study of the appendicular skeletal morphology, with a particular emphasis on the autopodial elements (manus and pes), of the extinct caviine rodent Microcavia criolloensis (Late Pleistocene, Uruguay), together with that of living species of Microcavia and some allied caviines is performed. Burrow‐digging and above‐ground behaviour by M. criolloensis could have evolved in the Late Pleistocene, as with its relative M. australis in the Recent. This is suggested based on the morphology of preserved articulated skeletons along with fossil burrow‐like structures. The most remarkable features are: in its forelimb, where the humerus has a structure that would have allowed it to perform similar activities to M. australis, based on humeral width across the epicondiles relative to total humerus length index and a good resistance as indicated by high values relating the diameter of the diaphysis to its total length. Qualitative comparison shows that M. criolloensis had a stout, wide manus with relatively short digits including short, wide phalanges, despite its large size. In its hind limb there is a stout hind‐foot with relatively short and wide metatarsals and phalanges, as compared with those of the recent species, that could arguably be considered a useful tool for shovelling out displaced soil. The generalized morphology suggests above‐ground behaviour together with digging ability. The environmental adaptations of M. criolloensis are also briefly discussed, which seem to differ from those of its extant relatives. © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society, 2008, 154 , 795–806.     

Aquatic Adaptation and Swimming Mode Inferred from Skeletal Proportions in the Miocene Desmostylian Desmostylus

Desmostylians are enigmatic, extinct, semiaquatic marine mammals that inhabited coastlines of the northern Pacific Rim during the late Oligocene through middle Miocene. Principal components analysis (PCA) of trunk and limb proportions provides a rational multivariate context for separating living semiaquatic mammals on three orthogonal axes: a size axis (PC-I), a degree of aquatic adaptation axis (PC-II), and a forelimb- versus hind-limb-dominated locomotion axis (PC-III). The necessary skeletal measurements are available for Desmostylus hesperus but not for other desmostylians. Among species similar in size to Desmostylus in the study set, the one most similarly proportioned is the polar bear. Projection of Desmostylus on PC-II shows it to have been more aquatic than a polar bear (indicated by its relatively short ilium and femur, combined with relatively long metapodals and phalanges). Projection of Desmostylus on PC-III suggests that its aquatic locomotion was even more forelimb-dominated than that of a bear (indicated by its relatively long metacarpal III and corresponding proximal phalanx, combined with a relatively short metatarsal III and corresponding proximal phalanx). Desmostylians were different from all living semiaquatic mammals, and desmostylians are properly classified in their own extinct order, but their skeletal proportions suggest that bears provide an appropriate baseline for imagining what desmostylians were like in life.     

Changes in desert avifauna associated with the functional extinction of a terrestrial top predator

We investigated how long‐term suppression of populations of a top predator, the dingo Canis dingo, affected composition of sympatric avifauna in Australian deserts, by surveying bird assemblages across ~80 000 km² of arid dune‐fields on either side of the Dingo Barrier Fence (DBF; a 5614 km‐long fence separating ecosystems in which dingoes are abundant from ecosystems in which dingoes are functionally extinct). Using fourth‐corner modelling, incorporating species’ traits, we identified apparent declines of sedentary birds that nest in low vegetation and small birds that feed primarily on grass seed, and increases in scavenging birds associated with the functional extinction of dingoes. Occupancy differed between sites inside and outside the DBF in 13 bird species. We hypothesise that these differences in bird assemblages across the DBF result, in part, from increases in kangaroos Macropus spp. and red foxes Vulpes vulpes in arid landscapes where dingoes have been removed. Our study provides evidence that the functional extinction of a large terrestrial predator has had pervasive ecosystem effects, including shifts in composition of avian assemblages.     

Bird–flower interactions in the Macaronesian islands

Aims Several bird‐pollinated or ornithophilous flowers are present on the Macaronesian archipelagos, the Canary Islands and Madeira, but absent from nearby NW Africa and Europe. In Macaronesia, no specialist nectar‐feeding birds are found, but several generalist passerine bird species visit flowers for nectar. Two hypotheses attempt to explain the origin and evolution of ornithophily in the Macaronesian flora. According to ‘the island de novo hypothesis’, bird‐flowers evolved from mainland insect‐pollinated ancestors after island colonization. Alternatively, ancestors of the ornithophilous Macaronesian plant species evolved bird‐flowers before reaching the islands (‘the relict hypothesis’). In this study we first compile information of Macaronesian bird–flower interactions from the literature and our own field observations. Secondly, we discuss the two hypotheses of origin of ornithophily in the light of evidence from recent molecular plant phylogenies, palaeontology, historical biogeography of the African avifauna and flora, and present‐day ecological patterns. Location Madeira and Canary Islands. Results At least eleven endemic Macaronesian plant species from six genera have typical ornithophilous floral traits. These genera are: Canarina and Musschia (Campanulaceae), Isoplexis (Scrophulariaceae), Echium (Boraginaceae), Lotus (Fabaceae) and Lavatera (Malvaceae). These lineages have clear affinities to the Mediterranean region, except for Canarina whose closest relatives grow in East African mountains. Six generalist passerine bird species of Sylvia, Phylloscopus (Sylviidae), Serinus (Fringillidae) and Parus (Paridae) visit this flora for nectar. Main conclusion We suggest that the origin and evolution of ornithophilous traits in these plant species took place mostly in mainland areas prior to island colonization. In Canarina and Lavatera, it is well supported that ornithophily is a relict condition, which originated in mainland areas possibly in association with specialist nectar‐feeding birds. For the remaining plant species except Echium wildpretii bird floral traits probably also are a relict condition. These species may be derived from ancestors, which were visited by specialist nectar‐feeding birds during geological periods when the Mediterranean and the Ethiopian vegetation were intermingled in mainland Africa. Probably, these mainland ancestors went extinct due to severe climatic fluctuations, while their Macaronesian descendants survived in ‘refuge’ on the islands. Finally, the island de novo hypothesis may explain the evolution of a mixed bird/insect‐pollination system in the neo‐endemic red‐flowered Echium wildpretii.     

Evaluating the Qualitative Effectiveness of a Novel Pollinator: a Case Study of Two Endemic Hawaiian Plants

In situations where native mutualists have become extinct, non‐native species may partner with remnant native species. However, non‐native mutualists may differ behaviorally from extinct native mutualists. In the case of pollination, novel relationships between natives and non‐natives could differ both quantitatively and qualitatively from native–native relationships. In Hawai'i, the non‐native Japanese White‐eye (Zosterops japonicus) has largely replaced endemic birds as pollinator of the endemic Clermontia parviflora and C. montis‐loa. We surveyed Clermontia patches and found that they ranged from 106 to 1198 m in diameter. We performed manual pollination of flowers with pollen taken from plants at five distance categories, ranging from 0 (self‐fertilization) to 20 km, and examined the germination of resulting seeds. We used radiotelemetry to estimate daily Japanese White‐eye movement distances. Percent germination of seeds after short‐ to intermediate‐distance pollination crosses (i.e., 20–1200 m, or intra‐patch pollen transfer distances) significantly exceeded germination of seeds from selfed trials for C. parviflora. No significant differences in germination rates among treatments were detected for C. montis‐loa. The maximum daily movement distances of radio‐tracked birds were generally <1 km. Together, these results suggest that this novel pollinator may be an effective mutualist for both Clermontia species. This study serves as an example of research examining qualitative components of novel mutualism, which are generally neglected relative to quantitative components.     

How marine currents influenced the widespread natural overseas dispersal of reptiles in the Western Indian Ocean region

In a recent contribution to this journal, Wilmé et al. (2016) proposed that the giant tortoises of the islands of the Western Indian Ocean (WIO: Aldabra, the Mascarenes, and the Granitic Seychelles) might have originated from translocation by early Austronesian sailors. Prompted by this paper we review recent literature and show that natural overseas dispersal was remarkably widespread in the colonization history of terrestrial reptiles in the WIO region. Almost 90% of the successful colonization events are supported by prevailing marine surface currents. However, these currents may change over geological (and evolutionary) time‐scales, and eddies and counter‐currents may facilitate transport against the main current direction. We review the cases of the extant and extinct WIO giant tortoises and suggest that the current distribution of all lineages can be convincingly explained by overseas dispersal.     

A Molecular Phylogeny of Plesiorycteropus Reassigns the Extinct Mammalian Order ‘Bibymalagasia’

Madagascar is well known for its diverse fauna and flora, being home to many species not found anywhere else in the world. However, its biodiversity in the recent past included a range of extinct enigmatic fauna, such as elephant birds, giant lemurs and dwarfed hippopotami. The ‘Malagasy aardvark’ (Plesiorycteropus) has remained one of Madagascar’s least well-understood extinct species since its discovery in the 19^th century. Initially considered a close relative of the aardvark (Orycteropus) within the order Tubulidentata, more recent morphological analyses challenged this placement on the grounds that the identifiably derived traits supporting this allocation were adaptations to digging rather than shared ancestry. Because the skeletal evidence showed many morphological traits diagnostic of different eutherian mammal orders, they could not be used to resolve its closest relatives. As a result, the genus was tentatively assigned its own taxonomic order ‘Bibymalagasia’, yet how this order relates to other eutherian mammal orders remains unclear despite numerous morphological investigations. This research presents the first known molecular sequence data for Plesiorycteropus, obtained from the bone protein collagen (I), which places the ‘Malagasy aardvark’ as more closely related to tenrecs than aardvarks. More specifically, Plesiorycteropus was recovered within the order Tenrecoidea (golden moles and tenrecs) within Afrotheria, suggesting that the taxonomic order ‘Bibymalagasia’ is obsolete. This research highlights the potential for collagen sequencing in investigating the phylogeny of extinct species as a viable alternative to ancient DNA (aDNA) sequencing, particularly in cases where aDNA cannot be recovered.