Dissimilation of citric acid byStreptococcus paracitrovorus

Summary and conclusions S.paracitrovorus does not readily dissimilate citric acid in the absence of sugar but does attack citric acid relatively vigorously in the presence of small quantities of glucose or lactose. The effect of glucose and lactose in initiating the dissimilation of citric acid is catalytic.The sugars which act catalytically are themselves fermented to approximately equimolar quantities of carbon dioxide, ethyl alcohol and lactic acid. The dissimilation of a combined substrate of citrate and glucose forms, in addition, acetic acid, acetylmethylcarbinol, 2,3-butylene glycol and under certain conditions, pyruvic acid which acts as an intermediate compound. Pyruvate is dissimilated to products similar to those from a fermentation of citrate plus glucose.The reactions ofKrebs' citric acid cycle apparently do not apply to the dissimilation of citric acid byS.paracitrovorus because the fermentation of citric acid proceeds anaerobically, consumes little oxygen aerobically and is not inhibited by arsenite.Inasmuch as milk contains lactose, the fermentation of citric acid in milk byS.paracitrovorus may be catalyzed as shown in these studies.Journal paper No.J711 of the Iowa Agricultural Experiment Station, Project 451.     

Lethality in respiratory deficiency and utilization of fermentation energy in petite negative yeasts

Summary Before the requirements for lipid nutrilites had been recognized, the anaerobic cultivation of yeast during an unlimited number of generations always failed. In an attempt to explain this situation, F. Windisch et al. (1960a, 1960b) supposed that fermentative dissimilation is unable to provide energy for growth. In the present study a yeast, Saccharomyces rosei, is discussed in which the hereditary loss of the respiratory system becomes lethal after a few generations. As this might be an example of an organism in which fermentative dissimilation, although present, cannot replace respiration, it was investigated whether and to what extent fermentation can provide energy for growth in a normal strain of this species. It was found, with the aid of steady state continuous cultures, that under conditions of very limited oxygen supply, S. rosei can synthesize at least 98% of the total amount of newly forme living matter with the aid of energy obtained from fermentative dissimilation, irrespective of the number of generations. Thus, the fermentative dissimilation should in principle be sufficient, after the disappearance of the respiratory dissimilation, to provide energy for growth in this species. The lethality of respiratory deficiency observed in this species cannot be explained by assuming that fermentative dissimilation per se is unable to provide energy for growth.     

The fermentation of xylose: studies by carbon-13 nuclear magnetic resonance spectroscopy

Summary The fermentation ofd-xylose byPachysolen tannophilus, Candida shehatae, andPichia stipitis has been investigated by¹³C-nuclear magnetic resonance spectroscopy of both whole cells and extracts. The spectra of whole cells metabolizingd-xylose with natural isotopic abundance had significant resonance signals corresponding only to xylitol, ethanol and xylose. The spectra of whole cells in the presence of [1-¹³C]xylose or [2-¹³C]xylose had resonance signals corresponding to the C-1 or C-2, respectively, of xylose, the C-1 or C-2, respectively, of xylitol, and the C-2 or C-1, respectively, of ethanol. Xylitol was metabolized only in the presence of an electron acceptor (acetone) and the only identifiable product was ethanol. The fact that the amount of ethanol was insufficient to account for the xylitol metabolized indicates that an additional fate of xylitol carbon must exist, probably carbon dioxide. The rapid metabolism of xylulose to ethanol, xylitol and arabinitol indicates that xylulose is a true intermediate and that xylitol dehydrogenase catalyzes the reduction (or oxidation) with different stereochemical specificity from that which interconverts xylitol andd-xylulose. The amino acidl-alanine was identified by the resonance position of the C-3 carbon and by enzymatic analysis of incubation mixtures containing yeast and [1-¹³C]xylose or [1-¹³C]glucose. The position of the label from both substrates and the identification of isotope also in C-1 of alamine indicates flux through the transketolase/transaldolase pathway in the metabolism. The identification of a resonance signal corresponding to the C-1 of ethanol in spectra of yeast in the presence of [1-¹³C]xylose and fluoroacetate (but not arsenite) indicates the existence of equilibration of some precursor of ethanol (e.g. pyruvate) with a symmetric intermediate (e.g. fumarate or succinate) under these conditions.     

The wine yeasts of the Cape

Summary Ascospore formation has been observed in three species of the genusBrettanomyces, viz. Brett. bruxellensis. Brett, intermedius andBrett. schanderlii. On media of adequate vitamin content these species form 1–4 hat-shaped ascospores. The spores are liberated rather soon after maturation. Heat treatment of ascogenous cultures indicated that these species are homothallic. In view of the fact that ascospore formation has been observed in the type species,Brett. bruxellensis, the transfer of the genus to theEndomycetaceae should be considered. Part I, II and III: Antonie van Leeuwenhoek 24, 239, 1958;25, 145, 1959;25, 449, 1959.     

Effect of medium osmolarity on the bioproduction of glycerol and ethanol by Hansenula anomala growing on glucose and ammonium

The osmotolerant yeast Hansenula anomala survives in media at low water activity resulting from increasing NaCl concentrations in the culture medium by producing compatible solutes. High salinity resulted in the use of a large part of the assimilated carbon substrate (glucose) for cell maintenance (28%), required for intracellular synthesis compounds and for osmotic cell regulation. The maintenance coefficient for non-growth-associated glucose consumption was found to be 0.38 mmol glucose g biomass⁻¹ h⁻¹. For decreasing water activity, there is a competition between the pathways leading to glycerol and ethanol production, until an experimental ethanol/total glycerol ratio reached a value 3.4 for 2 mol l⁻¹ NaCl (close to the theoretical value of 4)—illustrating the osmodependent channelling of carbon towards polyols production. This competition leads to a cessation of ethanol production during the stationary state before that of glycerol. Since osmotic adjustment occurred mainly during growth, glycerol production during stationary state can be clearly related to another mechanism other than osmotic: it was excreted by a fermentative mechanism to ensure energy for cell maintenance.     

Sul Controllo Della Glicolisi Nel Lievito

Abstract

On the control of carbohydrate utilization in yeast. — The results of a previous investigation showed that in higher plants the stimulating action of 2,4 dinitrophenol (DNP) on oxygen uptake and glycolysis is accompained by a fall of the level of reducing sugars, due to an increase of their respiratory utilization, and thus — according to every evidence — of the rate of hexose phosphate synthesis.

In the present work, the occurrence of a similar phenomenon in yeast (where the inhibiting effect of DNP on glucose uptake is not so much marked as in higher plant tissue) was investigated.

Here again DNP, at a 10^-4M concentration, induced a rapid decrease of the disaccaride trehalose and of glycogen, such as to account for the increased rate of respiration and of fermentation. The ratio between the contributions to CO₂ of Carbons 1 and respectively 6 of glucose was not significantly changed by DNP, which suggests that at least part of the DNP induced increase of glycolysis was mediated by the Embden Meyerhof pathway, and thus that a larger amount of fructose diphosphate was formed in the presence of the uncoupler.

In other experiments the effects of DNP on the dissimilation of C¹⁴ labeled glucose, glycerol and pyruvate to CO₂ and ethanol, and on the incorporation of the radioactive isotope into various fractions, 15 minutes after feeding the labeled substrates, was investigated. It was found that:

1) Glucose and glycerol uptake is not markedly inhibited by DNP at the concentration employed (^10–4M).

2) In the absence of DNP, a considerable portion of the radioactivity fed as glucose or glycerol and taken up by the yeast cells is recovered in the glycogen and trehalose fractions. (35% of the glucose, and 22% of the glycerol taken up). This is also observed for carbons 2 and 3, but not for carbon 1 of pyruvate. This indicates a reversibility of the glycolitic processes comprehended in the region between phospho-enol pyruvate andpolysac-carides; while the pyruvate kinase reaction appears to represent a sharp barrier at the « lower » end of glycolysis.

3) DNP almost completely inhibited the incorporation of C¹⁴ from glucose and glycerol into glycogen and trehalose, although it increased the rate of its dissimilation to CO₂ and ethanol. The total amount of glucose and glycerol transformed in the various metabolites (and thus — according to every evidence — phosphorylated) was somewhat lowered and proteins synthesis severely depressed. These effects are interpreted as due to the uncoupling action of DNP at the mitochondrial level, and to the consequent general decrease of the ATP and UTP levels required for protein and for polysaccharide synthesis.     

Cloning of a second gene encoding 6-phosphofructo-2-kinase in yeast, and characterization of mutant strains without fructose-2,6-bisphosphate

We have identified a new gene, PFK27, that encodes a second inducible 6-phosphofructo-2-kinase in the yeast Saccharomyces cerevisiae. Sequencing shows an open reading frame of 397 amino acids and 45.3 kDa. Amino acid sequence comparisons with other bifunctional 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase isoenzymes of various organisms revealed similarities only to the kinase domains. Expression of PFK27 was induced severalfold by glucose and sucrose, but not by galactose or maltose, suggesting that sugar transport might be involved in triggering the induction signal. We have constructed a mutant strain devoid of any fructose-2,6-bisphosphate. The mutant strain grew well on several kinds and concentrations of carbon sources. The levels of hexose phosphates in the cells were increased, but flux rates for glucose utilization and ethanol production were similar to the wild-type strain. However, after the transfer of the mutant cells from respiratory to fermentative growth conditions, growth, glucose consumption and ethanol production were delayed in a transition phase. Our results show that fructose-2,6-bisphosphate is an important effector in vivo of the 6-phosphofructo-1-kinase/fructose-1,6-bisphospha-tase enzyme pair, and is involved in the initiation of glycolysis during the transition to a fermentative mode of metabolism. Nevertheless, it can be effectively replaced by other effectors and regulatory mechanisms during growth on glucose.     

Nutritional requirements ofXanthomonas phaseoli var.fuscans

As found by Starr (1946),l-glutamic acid is necessary for the growth ofXanthomonas phaseoli var.fuscans. According to our results, the growth is stimulated byl-asparagine in the presence ofl-glutamic acid;l-asparagine itself, however, does not serve as a source of carbon and nitrogen.Xanthomonas phaseoli var.fuscans grew well in a medium containing tryptone. Some peptides of the acidic fraction isolated from tryptone affected the growth as much as tryptone itself. Vitamins and plant growth substances did not affect the growth of the bacteria; proteins appeared to be a poor carbon and nitrogen source. On substituting glucose in a glutamic acid-containing medium with another saccharide, the growth of the bacteria was found equal or better in media containing mannose, sucrose, fructose, maltose or starch. The bacteria grew less satisfactorily in media containing galactose and cellobiose as compared with media containing glucose.     

Effect of carbon sources on the growth and ethanol production of native yeast Pichia kudriavzevii ITV-S42 isolated from sweet sorghum juice

The importance of non-Saccharomyces yeast species in fermentation processes is widely acknowledged. Within this group, Pichia kudriavzevii ITV-S42 yeast strain shows particularly desirable characteristics for ethanol production. Despite this fact, a thorough study of the metabolic and kinetic characteristics of this strain is currently unavailable. The aim of this work is to study the nutritional requirements of Pichia kudriavzevii ITV-S42 strain and the effect of different carbon sources on the growth and ethanol production. Results showed that glucose and fructose were both assimilated and fermented, achieving biomass and ethanol yields of 0.37 and 0.32 gg⁻¹, respectively. Glycerol was assimilated but not fermented; achieving a biomass yield of 0.88 gg⁻¹. Xylose and sucrose were not metabolized by the yeast strain. Finally, the use of a culture medium enriched with salts and yeast extract favored glucose consumption both for growth and ethanol production, improving ethanol tolerance reported for this genre (35 g L⁻¹) to 90 g L⁻¹ maximum ethanol concentration (over 100%). Furthermore Pichia kudriavzevii ITV-S42 maintained its fermentative capacity up to 200 g L⁻¹ initial glucose, demonstrating that this yeast is osmotolerant.

     

Effects of Cultural Conditions on Mononucleotide Phosphorylating Activity of Yeast Cells

It was found that the AMP phosphorylating activity of Candida sp. N–25–2 (a hydrocarbon assimilating yeast) was affected extremely by the liquid volume of cultural medium and the concentration of inorganic salts in medium. The yeast cells having no fermentative activity showed a strong activity of AMP phosphorylation when they were cultured under relative anaerobic conditions. It was observed that the glucose consumption of yeast cells was promoted by the addition of Mg²⁺ ion and AMP into the reaction system, and that the AMP phosphorylation was promoted in the presence of F-1,6-DP or phosphaenolpyruvate.

The cells of Candida sp. N–25–2 grown on glucose medium had a remarkable fermentative activity, while the cells grown on acetate or ethanol medium had a weak activity. On the other hand, it was found that the cells grown at strong aeration on glucose medium were able to produce remarkably the phosphorylated substances from mononucleotides, when F-1,6-DP was added as a phosphate donor. Similar phenomenon was observed in case of the cells grown on the carbon sources such as acetate, ethanol and hydrocarbon.     

A quantitative description of the growth of Saccharomyces cerevisiae CBS 426 on a mixed substrate of glucose and ethanol

Saccharomyces cerevisiae CBS 426 was grown aerobically in continuous culture with a mixture of glucose and ethanol as the carbon source. The flows of biomass, glucose, ethanol, oxygen, and carbon dioxide were measured. A model for growth with two substrates was derived. Application of this model to the above-mentioned system yielded values for Y_ATP and P/O. The joint confidence regions for these parameters were calculated. The relevance to industrial production of bakers' yeast is discussed.     

Yeast mutants without phosphofructokinase activity can still perform glycolysis and alcoholic fermentation

Summary Mutants of Saccharomyces cerevisiae without detectable phosphofructokinase activity were isolated. They were partly recessive and belonged to two genes called PFK1 and PFK2. Mutants with a defect in only one of the two genes could not grow when they were transferred from a medium with a nonfermentable carbon source to a medium with glucose and antimycin A, an inhibitor of respiration. However, the same mutants could grow when antimycin A was added to such mutants after they had been adapted to the utilization of glucose. Double mutants with defects in both genes could not grow at all on glucose as the sole carbon source. Mutants with a single defect in gene PFK1 or PFK2 could form ethanol on a glucose medium. However, in contrast to wild-type cells, there was a lag period of about 2 h before ethanol could be formed after transfer from a medium with only nonfermentable carbon sources to a glucose medium. Wild-type cells under the same conditions started to produce ethanol immediately. Mutants with defects in both PFK genes could not form ethanol at all. Mutants without phosphoglucose isomerase or triosephosphate isomerase did not form ethanol either. Double mutants without phosphofructokinase and phosphoglucose isomerase accumulated large amounts of glucose-6-phosphate on a glucose medium. This suggested that the direct oxidation of glucose-6-phosphate could not provide a bypass around the phosphofructokinase reaction. On the other hand, the triosephosphate isomerase reaction was required for ethanol production. Experiments with uniformly labeled glucose and glucose labeled in positions 3 and 4 were used to determine the contribution of the different carbon atoms of glucose to the fermentative production of CO₂. With only fermentation operating, only carbon atoms 3 and 4 should contribute to CO₂ production. However, wild-type cells produced significant amounts of radioactivity from other carbon atoms and pfk mutants generated CO₂ almost equally well from all six carbon atoms of glucose. This suggested that phosphofructokinase is a dispensable enzyme in yeast glycolysis catalyzing only part of the glycolytic flux.     

Double mutation of the <Emphasis Type="Italic">PDC1</Emphasis> and <Emphasis Type="Italic">ADH1</Emphasis> genes improves lactate production in the yeast <Emphasis Type="Italic">Saccharomyces cerevisiae</Emphasis> expressing the bovine lactate dehydrogenase gene

Expression of a heterologous l-lactate dehydrogenase (l-ldh) gene enables production of optically pure l-lactate by yeast Saccharomyces cerevisiae. However, the lactate yields with engineered yeasts are lower than those in the case of lactic acid bacteria because there is a strong tendency for ethanol to be competitively produced from pyruvate. To decrease the ethanol production and increase the lactate yield, inactivation of the genes that are involved in ethanol production from pyruvate is necessary. We conducted double disruption of the pyruvate decarboxylase 1 (PDC1) and alcohol dehydrogenase 1 (ADH1) genes in a S. cerevisiae strain by replacing them with the bovine l-ldh gene. The lactate yield was increased in the pdc1/adh1 double mutant compared with that in the single pdc1 mutant. The specific growth rate of the double mutant was decreased on glucose but not affected on ethanol or acetate compared with in the control strain. The aeration rate had a strong influence on the production rate and yield of lactate in this strain. The highest lactate yield of 0.75 g lactate produced per gram of glucose consumed was achieved at a lower aeration rate.     

On the production of food yeast from partially hydrolyzed cereal straw

Summary 1. Cereal straw was partially hydrolyzed with dilute sulphuric or hydrochloric acid at elevated temperatures, yielding about 20% of matter assimilable byTorulopsis utilis (calculated on oven-dry straw), which consisted chiefly of xylose, with small amounts of glucose and acetic acid.2. Experiments on a laboratory scale with non-fermentable substrates like ethanol and acetic acid showed that also in these cases an ample aeration is an essential condition for a good yield.3. Acetic acid is harmful to the yeast, even in small concentrations, when the pH is lower than 5.0.4. Small quantities of glucose or acetic acid stimulate the conversion of xylose byTorulopsis utilis.5. With an adequate aeration and an initial pH of 5.5–6.0 (maintained at this level until the acetic acid has disappeared and then lowered to 4.0–4.5) satisfactory conversion rates and yields could be obtained on straw extracts as mentioned sub 1.6. The results of the laboratory experiments mentioned sub 5 could be reproduced in a semi-technical installation with a capacity of 200 l straw extract.7. Good results were obtained in this installation with aVogelbusch aeration device, while foaming could be adequately controlled by means of a rotating wire screen.     

The production of xylitol by enzymatic hydrolysis of agricultural wastes

Agricultural waste products, beech wood and walnut shells, were hydrolyzed at 40°C using mixed crude enzymes produced byPenicillium sp. AHT-1 andRhizomucor pusillus HHT-1.d-xylose, 4.1 g and 15.1 g was produced from the hydrolysis of 100 g of beech wood and walnut shells, respectively. For xylitol production,Candida tropicalis IFO0618 and the waste product hydrolyzed solutions were used. The effects on xylitol production, of adding glucose as a NADPH source,d-xylose and yeast extract, were examined. Finally, a 50% yield of xylitol was obtained by using the beech wood hydrolyzed solution with the addition of 1% yeast extract and 1% glucose at an initial concentration.     

Studies on true dissimilatory nitrate reduction. I. Fate of the hydrogen donator in bacterial nitrate reduction

Summary The first aim of the investigations made has been the determination of the fate of glucose as a hydrogen donator in the dissimilatory nitrate reduction byPseudomonas aeruginosa. The carbon balances made are strongly in favour of the view that the part of the glucose consumed which is not converted into cell material is completely converted into carbon dioxide and water. This conclusion is supported by the simultaneously made nitrogen and oxidoreduction balances. The result should be considered as a confirmation of a widely hold belief for which, however, until now experimental evidence was practically lacking.     

Production of ethanol from wood hemicellulose hydrolyzates by a xylose-fermenting yeast mutant,Candida sp. XF 217

Summary Ethanol was produced from wood chip hemicellulose hydrolyzate by a xylose-fermenting yeast mutant, Candida sp. XF 217. The rates of D-xylose consumption and ethanol production were greater under aerobic than fermentative conditions. The slow rate of fermentation under fermentative conditions could be overcome by supplementing the broth with D-xylose isomerase (glucose isomerase). The ethanol yield, as based on the sugar consumed, was approximately 90% of the theoretical value.     

Structural characterization of the gene and corresponding cDNA for the cytochrome P450rm from Rhodotorula minuta which catalyzes formation of isobutene and 4-hydroxylation of benzoate

Cytochrome P450rm was previously isolated from the basidiomycete yeast Rhodotorula minuta as a bifunctional enzyme with isobutene-forming and benzoate 4-hydroxylase activities. We cloned the gene and corresponding cDNA for P450rm in order to characterize the enzyme in the context of fungal phylogeny and physiology. From the cDNA sequence, P450rm was deduced to have 527 amino acids with a calculated molecular weight of 59 136. P450rm shared 48% amino acid sequence identity with CYP53A1 from Aspergillus niger, indicating that the gene belongs to a novel subfamily of CYP53, CYP53B. However, the organization of the P450rm gene, which has eight exons and seven introns, differed completely to that of CYP53A1. Northern analysis demonstrated that the level of P450rm mRNA expression increased when L-phenylalanine was used as sole carbon source. These results suggest that P450rm has been well conserved during the evolution of fungi as a benzoate 4-hydroxylase in the dissimilation pathway starting from L-phenylalanine Received: 18 February 1997 / Accepted: 18 May 1997     

Role of sugars in phosphate transport in baker's yeast

Sugar substrates which depress the intracellular level of inorganic phosphate in baker's yeast (d-glucose,d-fructose,d-mannose, sucrose, as well as maltose andd-galactose after appropriate induction) also make transmembrane flux of phosphate anions possible. Acetate and ethanol, although readily oxidized, as well as nonmetabolized sugars, do not produce the effect. Phosphate uptake in whole cells (but not in protoplasts) is accelerated by preincubation with substrate either aerobically or anaerobically but the actual presence of substrate in the incubation medium is required for transport to take place. Starved cells take up phosphate from the medium with aK _m of 3mm, the half-activation concentration by glucose being 18mm, the amount taken up being constant under given conditions (40 μmol/g dry wt. here). Phosphate-rich cells lose phosphate to the medium in the presence of a suitable substrate. The uptake process is characterized by an activation energy of 13400 cal/mol at 10⁻⁶ m phosphate and of 9400 cal/mol at 10⁻³ m phosphate. The process shows two optima at pH 5.0 and 7.0. A short-lived intermediate of fermentative sugar metabolism is postulated as essential for the translocation of phosphate across the yeast membrane.