S-allele diversity in Prunus L. Cerasus subgenus from Iran

In this study, S-allele diversity of eight wild and two commercial species of the Cerasus subgenus in Iran was investigated using two primer pairs. A high level of S-allele polymorphism was detected among and within the species evaluated. Furthermore, most of wild species showed 2–4 alleles based on S-allele primers and may be considered as tetraploid. Sweet cherry cultivars, Siah-Mashhad, Siah-Shabestar, Takdaneh-Mashhad, Siah-Daneshkadeh and Protiva showed S₃S₁₂, S₃S₁₂, S₃S₁₂, S₃S₅ and S₃S₄ combinations, respectively, allele S₃ showing the highest frequency. Three Iranian sweet cherry cultivars had the same allelic combination (S₃S₁₂) that the same ancestor in genealogy of these cultivars may explain the loss of diversity observed at the S-locus. Wild cherry (mazzard) accessions showed wide range of alleles such as S₁, S₂, S₇, S₁₄ and S₂₀ and unknown alleles, while sour cherries showed S₆, S₉, S₁₃ and S₂₇ alleles. In conclusion, the conservation of these highly diverse native species of Iranian wild Cerasus germplasm is recommended for future breeding activity.     

Evolution of enzyme catalytic power. Characteristics of optimal catalysis evaluated for the simplest plausible kinetic model

1. Evolutionary changes in the structure of an enzyme that provide an increase in its K_m value are considered. Provided that K_m increases as a result of increases in the forward rate constants of the catalysis relative to the reverse rate constants, the enzyme catalyses the conversion of a fixed concentration of its substrate more rapidly when its structure provides that K_m>[S] than when K_m<[S]. 2. Catalytic efficiency of enzymes is discussed in terms of the simplest plausible model, the Haldane [(1930) Enzymes, Longmans, London] reversible three-step model: [Formula: see text] The rate equation for the forward reaction of this model (formation of P) may be written in the simple form: [Formula: see text] K_eq. is the equilibrium constant (=[P]_eq./[S]_eq.), and k_cat.=V/[E]_T, where [E]_T is the total enzyme concentration. 3. To assess the effectiveness of an enzyme, it is necessary only to determine the extent to which the constraints of a particular kinetic mechanism permit v₂ (v when K_m»[S]) to approach v_d (the diffusion-limited rate). 4. The value of the optimal rate of catalysis (v_opt., the maximal value of v₂) is dictated by the equilibrium constant for the reaction, K_eq.; v₂=v_d/a, where [Formula: see text] when k₊₁ is assumed equal to k₋₃, and v_opt.=v_d/a_min.. When K_eq.≥1, it is necessary that k₊₂»k₋₁ for a to take its minimum value, a_min.; when K_eq.«1, it is necessary only that k₊₂»K_eq.·k₋₁, i.e. a can equal a_min. even if k₊₂<k₋₁. When K_eq.»1, v_opt.=v_d; when K_eq.=1, v_opt.=v_d/2, and when K_eq.«1, v_opt.=K_eq.·v_d. 5. The analysis, together with predicted effects of evolutionary pressure, suggests that in practice the rates of the fastest enzyme-catalysed freely reversible reactions might be expected to be lower than the value of k₊₁[E]_T[S] by about an order of magnitude, particularly if K_eq.<1. 6. The existing literature suggests that, in general, appropriate values of K_m have evolved for the provision of high rates of catalysis but that many values of k_cat. are not large enough to provide optimal rates of catalysis unless the value of k₊₁ in vivo is lower than its value in free solution.     

Clothing insulation and temperature,layer and mass of clothing under comfortable environmental conditions

This study was designed to investigate the relationship between the microclimate temperature and clothing insulation (I_cl) under comfortable environmental conditions. In total, 20 subjects (13 women, 7 men) took part in this study. Four environmental temperatures were chosen: 14°C (to represent March/April), 25°C (May/June), 29°C (July/August), and 23°C (September/October). Wind speed (0.14ms^-1) and humidity (45%) were held constant. Clothing microclimate temperatures were measured at the chest (T_chest) and on the interscapular region (T_scapular). Clothing temperature of the innermost layer (T_innermost) was measured on this layer 30 mm above the centre of the left breast. Subjects were free to choose the clothing that offered them thermal comfort under each environmental condition. We found the following results. 1) All clothing factors except the number of lower clothing layers (L_lower), showed differences between the different environmental conditions (P<0.05). The ranges of T_chest were 31.6 to 33.5°C and 32.2 to 33.4°C in T_scapular. The range of T_innermost was 28.6 to 32.0°C. The range of the upper clothing layers (L_upper) and total clothing mass (M_total) was 1.1 to 3.2 layers and 473 to 1659 g respectively. The range of I_cl was 0.78 to 2.10 clo. 2) Post hoc analyses showed that analysis of T_innermost produced the same results as for that of I_cl. Likewise, the analysis of L_upper produced the same result as the analysis of the number of total layers (L_total) within an outfit. 3) Air temperature (t_a) had positive relationships with T_chest and T_scapular and with T_innermost but had inverse correlations with I_cl, M_total, L_upper and L_total. T_chest, T_scapular, and T_innermost increased as t_a rose. 4) I_cl had inverse relationships with T_chest and T_innermost, but positive relationships with M_total, L_upper and L_total. I_cl could be estimated by M_total, L_upper, and T_scapular using a multivariate linear regression model. 5) L_upper had positive relationships with I_cl and M_total, but L_lower did not. Subjects hardly changed L_lower under environmental comfort conditions between March and October. This indicates that each of the T_chest, M_total, and L_upper was a factor in predicting I_cl. T_innermost might also be a more influential factor than the clothing microclimate temperature.     

The redox potentials of the b-type cytochromes of higher plant chloroplasts

1. In fresh chloroplasts, three b-type cytochromes exist. These are b-559_HP (λ_max, 559 nm; E_m at pH 7, +370 mV; pH-independent E_m), b-559_LP (λ_max, 559 nm; E_m at pH 7, +20 mV; pH-independent E_m) and b-563 (λ_max, 563 nm; E_m at pH 7, ?110 mV; pH-independent E_m). b-559_HP may be converted to a lower potential form (λ_max, 559 nm; E_m at pH 7, +110 mV; pH-independent E_m).2. In catalytically active b-f particle preparations, three cytochromes exist. These are cytochrome f (λ_max, 554 nm; E_m at pH 7, +375 mV, pK on oxidised cytochrome at pH 9), b-563 (λ_max, 563 nm; E_m at pH 7, ?90 mV, small pH-dependence of E_m) and a b-559 species (λ_max, 559 nm, E_m at pH 7, +85 mV; pH-independent E_m).3. A positive method of demonstration and estimation of b-559_LP in fresh chloroplasts is described which involves the use of menadiol as a selective reductant of b-559_LP.     

Analytical studies of rapidly inactivating and noninactivating sodium currents in differentiated NG108-15 neuronal cells

The rapidly inactivating (I_Naf) and noninactivating Na⁺ currents (I_Na(NI)) were characterized in NG108-15 neuronal cells differentiated with dibutyryl cyclic AMP in this study. Standard activation and inactivation protocols were used to evaluate the steady-state and kinetic properties of the I_Naf present in these cells. The voltage protocols with a slowly depolarizing ramp were implemented to examine the properties of I_Na(NI). Based on experimental data and computer simulations, a window component of the rapidly inactivating sodium current (I_Naf(W)) was also generated in response to the slowly depolarizing ramp. The I_Naf(W) was subtracted from I_Na(NI) to yield the persistent Na⁺ current (I_Na(P)). Our results demonstrate the presence of I_Na(P) in these cells. In addition to modifying the steady-state inactivation of I_Naf, ranolazine or riluzloe could be effective in blocking I_Naf(W) and I_Na(P). The ability of ranolazine and riluzole to suppress I_Na(P) was greater than their ability to inhibit I_Naf(W). In current-clamp recordings, current-induced voltage oscillations were applied to elicit action potentials (APs) through a gradual transition between spontaneous depolarization and upstroke. Ranolazine or riluzole at a concentration of 3 μM then effectively suppressed the AP firing generated by oscillatory changes in membrane current. The data suggest that a small rise in I_Na(NI) facilitates neuronal hyper-excitability due the decreased threshold of AP initiation. The underlying mechanism of the inhibitory actions of ranolazine or riluzole on membrane potential in neurons or neuroendocrine cells in vivo may thus be associated with their blocking of I_Na(NI).     

Energetics of Active Transport Processes

Discussions of active transport usually assume stoichiometry between the rate of transport J₊ and the metabolic rate J_r. However, the observation of a linear relationship between J₊ and J_r does not imply a stoichiometric relationship, i.e., complete coupling. Since coupling may possibly be incomplete, we examine systems of an arbitrary degree of coupling q, regarding stoichiometry as a limiting case. We consider a sodium pump, with J₊ and J_r linear functions of the electrochemical potential difference, -X₊, and the chemical affinity of the metabolic driving reaction, A. The affinity is well defined even for various complex reaction pathways. Incorporation of a series barrier and a parallel leak does not affect the linearity of the composite observable system. The affinity of some region of the metabolic chain may be maintained constant, either by large pools of reactants or by regulation. If so, this affinity can be evaluated by two independent methods. Sodium transport is conveniently characterized by the open-circuit potential (Δψ)_I=0 and the natural limits, level flow (J₊)_X+=0, and static head X⁰₊ = (X₊)_J+=0. With high degrees of coupling -X⁰₊/F approaches the electromotive force E_Na (Ussing); -X⁰₊/F cannot be identified with ((RT/F) ln f)_X+=0, where f is the flux ratio. The efficiency η = -J₊X₊/J_rA is of significance only when appreciable energy is being converted from one form to another. When either J₊ or -X₊ is small η is low; the significant parameters are then the efficacies ε_J+ = J₊/J_rA and ε_X+ = -X₊/J_rA, respectively maximal at level flow and static head. Leak increases both J₊ and ε_J+ for isotonic saline reabsorption, but diminishes -X⁰₊ and ε_X♀. Electrical resistance reflects both passive parameters and metabolism. Various fundamental relations are preserved despite coupling of passive ion and water flows.     

Multinuclear NMR study and crystal structures of complexes of the types cis- and trans-Pt(amine)2I2

Complexes of the types cis- and trans-Pt(amine)₂I₂ were studied by spectroscopic methods, especially by multinuclear NMR spectroscopy. In ¹⁹⁵Pt NMR, the cis diiodo compounds with primary amines were observed between −3342 and −3357 ppm in acetone, while the trans compounds were found between −3336 and −3372 ppm. For the secondary amines, the chemical shifts were observed at lower fields. In ¹H NMR, the trans complexes were observed at higher fields than the cis compounds, while in ¹³C NMR, the reverse was observed. The ²J(¹⁹⁵Pt-¹H) and ³J(¹⁹⁵Pt-¹H) coupling constants are larger for the cis compounds (ave. 67 and 45 Hz, respectively) than for the trans isomers (ave. 59 and 38 Hz). In ¹³C NMR, the values of ²J(¹⁹⁵Pt-¹³C) and ³J(¹⁹⁵Pt-¹³C) were also found to be larger for the cis complexes (ave. 17 and 39 Hz versus 11 and 28 Hz). There seems to be a slight dependence of the pK_a values of the protonated amines or the proton affinity in the gas phase with the δ(Pt) chemical shifts. The crystal structures of eight diiodo complexes were determined. These compounds are cis-Pt(CH₃NH₂)₂I₂, cis-Pt(n-C₄H₉NH₂)₂I₂, cis-Pt(Et₂NH)₂I₂, trans-Pt(n-C₃H₇NH₂)₂I₂, trans-Pt(iso-C₃H₇NH₂)₂I₂, trans-Pt(n-C₄H₉NH₂)₂I₂, trans-Pt(t-C₄H₉NH₂)₂I₂ and trans-Pt(Me₂NH)₂I₂. The Pt-N bond distances located in trans position to the iodo ligands were compared to those located in trans position to the amines. The Pt-N bond in cis-Pt(Et₂NH)₂I₂ are much longer than the others, probably caused by the steric hindrance of the two very bulky ligands located in cis positions.     

Altered clearance of human α2-macroglobulin complexes following reaction with cis-dichlorodiamineplatinum(II)

Clearance studies were performed in mice using α₂-macroglobulin (α₂M), α₂M-trypsin comlex and α₂M-CH₃NH₂ complex. All three species were incubated with cis-dichlorodiamine platinum(II) (cis-DDPt) at concentrations between 9.0 μM and 1.67 mM for 4 h and then dialyzed. The clearance rate of native α₂M was unchanged following incubation with cis-DDPt. α₂M-trypsin and α₂M-CH₃NH₂ cleared rapidly from the ciruculation; however, reaction with cis-DDPt significantly decreased the plasma elimination rate of both complexes. Non-denaturing gel electrophoresis and α₂M activity assays demonstrated relative stability following incubations with cis-DDPt which markedly altered clearance. Evidence for cis-DDPt crosslinking of α₂M subunits was obtained: however, whether this crosslinking is involved in altered clearance remains undetermined. Iodoacetamide treatment of α₂M did not duplicate the effect of cis-DDPton α₂M clearance, nor did it inhibit the effect of cis-DDPt on α₂M clearance. Plasma elimination of α₂M complex was also unaltered by pretreatment of mice with intravenous free cis-DDPt.     

Estimation of electron density,effective atomic number and stopping power ratio using dual-layer computed tomography for radiotherapy treatment planning

PurposeAssess the accuracy for quantitative measurements of electron density relative to water (ρ_e/ρ_e,w), effective atomic number (Z_eff) and stopping power ratio relative to water (SPR_w) using a dual-layer computed tomography (DLCT) system.Methods and MaterialsA tissue characterization phantom was scanned using DLCT with varying scanning parameters (i.e., tube voltage, rotation time, CTDI_vol, and scanning mode) and different reference materials. Then, electron density ρ_e/ρ_e,w and atomic number Z_eff images were reconstructed, and their values were determined for each reference materials. Based on these two values, SPR_w was calculated. Finally, the percent error (PE) against the theoretical values was calculated for reference materials.ResultsSignificant linear relationships (p < 0.001) were observed between the measured and theoretical ρ_e/ρ_e,w (r = 1.000), Z_eff (r = 0.989) and SPR_w (r = 1.000) values. The PE for each reference material varied from –2.0 to 1.2% (mean, <0.1%) for electron density ρ_e/ρ_e,w, from –6.4 to 8.0% (mean, –2.0%) for atomic number Z_eff, and from –2.0 to 1.9% (mean, 0.3%) for stopping power ratio SPR_w. The mean PE of ρ_e/ρ_e,w (<0.1%), Z_eff (<–2.5%) and SPR_w (<0.4%) was verified across the variation of scanning parameters (p > 0.85).ConclusionsDLCT provides a reasonable accuracy in the measurements of ρ_e/ρ_e,w, Z_eff and SPR_w, and could enhance radiotherapy treatment planning and the subsequent outcomes.     

Effective/census population size ratio estimation: a compendium and appraisal

With an ecological-evolutionary perspective increasingly applied toward the conservation and management of endangered or exploited species, the genetic estimation of effective population size (N_e) has proliferated. Based on a comprehensive analysis of empirical literature from the past two decades, we asked: (i) how often do studies link N_e to the adult census population size (N)? (ii) To what extent is N_e correctly linked to N? (iii) How readily is uncertainty accounted for in both N_e and N when quantifying N_e/N ratios? and (iv) how frequently and to what degree might errors in the estimation of N_e or N affect inferences of N_e/N ratios? We found that only 20% of available N_e estimates (508 of 2617; 233 studies) explicitly attempted to link N_e and N; of these, only 31% (160 of 508) correctly linked N_e and N. Moreover, only 7% (41 of 508) of N_e/N ratios (correctly linked or not) reported confidence intervals for both N_e and N; for those cases where confidence intervals were reported for N_e only, 31% of N_e/N ratios overlapped with 1, of which more than half also reached below N_e/N = 0.01. Uncertainty in N_e/N ratios thus sometimes spanned at least two orders of magnitude. We conclude that the estimation of N_e/N ratios in natural populations could be significantly improved, discuss several options for doing so, and briefly outline some future research directions.     

小麦和玉米叶片光合-蒸腾日变化耦合机理

植物叶片光合-蒸腾耦合是陆地生态系统碳-水耦合的基础.已有研究将叶片光合-蒸腾耦合笼统归因于气孔的共同控制作用,缺乏对其耦合机理的全面分析.选择华北地区大田作物冬小麦(C3)和夏玉米(C4)为研究对象,分别在小麦开花期和玉米拔节期选择典型晴天进行叶片光合蒸腾日变化观测(8:00-18:00).结果发现:1)光合速率(An)、蒸腾速率(Tr)以及光合有效辐射(PAR)、叶片表面温度(T)和气孔导度(gs)均表现出单峰日变化特征,峰值出现在正午前后;2)An-Tr具有极显著线性正相关关系(小麦和玉米的相关系数分别为0.75**和0.92**,回归直线斜率分别为1.99和3.62);3)PAR、T和gs与An和Tr有线性正相关关系;4)PAR-An与PAR-Tr、T-An与T-Tr、gs-An与gs-Tr的回归直线形态非常相似.分析认为:1)在光合-蒸腾耦合特征方面,C3作物小麦和C4作物玉米叶片光合-蒸腾都有明显的线性耦合关系,但两者的耦合关系特征存在明显差异,玉米的An-Tr线性回归斜率要明显大于小麦;2)在光合-蒸腾耦合机理方面,日变化中PAR、T和gs同时受太阳辐射调控与An、Tr发生趋向相同、形态相似且近似同步的变化,因此PAR-An与PAR-Tr、T-An与T-Tr、gs-An与gs-Tr具有形态相似的线性关系,这保证了在PAR、T和gs等调控因子发生较大变化的日变化过程中光合-蒸腾保持良好的线性耦合关系.     

Dual recognition of S 1 and S 4 pistils by S 4 sm pollen in self-incompatibility of Japanese pear (Pyrus pyrifolia Nakai)

Most cultivars of Japanese pear (Pyrus pyrifolia Nakai) exhibit gametophytic self-incompatibility controlled by a single S-locus with multiple S-haplotypes. A self-compatible (SC) cultivar, ??Osanijisseiki?? (S ₂ S ₄ ^sm ), arising by a bud mutation of ??Nijisseiki?? (S ₂ S ₄ ), has a stylar-part mutant S ₄ ^sm -haplotype, which lacks the pistil S ₄ gene, which is the S ₄ -RNase gene. To efficiently breed SC cultivars, we selected ??Nashi Chuukanbohon Nou 1 Gou?? (??NCN1??) harboring homozygous S ₄ ^sm from a self-progeny of Osanijisseiki and crossed it with ??Okusankichi?? (S ₅ S ₇ ), ??Hakkou?? (S ₄ S ₅ ), or ??Ri-14?? (S ₁ S ₂ ). Fruit set (%) was compared after self-pollination of the trees in the three progenies. All trees derived from the three progenies were predicted to be SC, except for the S ₄ S ₄ ^sm trees in the progeny of NCN1 × Hakkou. However, S ₁ S ₄ ^sm trees in the progeny of NCN1 × Ri-14 proved to be self-incompatible (SI). The pollen from Osanijisseiki was incompatible with ??Doitsu?? (S ₁ S ₂ ), but that from Nijisseiki was compatible, suggesting a possibility that the S ₄ ^sm pollen was rejected by S ₁ -harboring pistils. This possibility was clarified by crossing the pollen from NCN1 (S ₄ ^sm S ₄ ^sm ) to Doitsu, ??Imamuraaki?? (S ₁ S ₆ ), or ??Hougetsu?? (S ₁ S ₇ ), all of which proved incompatible. On the other hand, S ₄ ^sm pollen was accepted by pistils harboring the S ₂ , S ₃ , S ₅ , S ₆ , S ₇ , S ₉ , and S _k haplotypes. The dual recognition of S ₁ and S ₄ pistils by S ₄ ^sm pollen can be attributed to a mutation of the pollen S ₄ gene(s).     

Somatic variations on a yellow mutant in Nicotiana tabacum L. (a1+/a1a2+/a2) I. Non-reciprocal genetic events occurring in leaf cells

A greenish-yellow mutant was obtained after treatment of seeds of Nicotiana tabacum L. var. Xanthi n.c. with ethyl methanesulfonate (EMS). Two genetically independent mutations (a₁ and a₂) were isolated. The first mutation (a₁) antagonizes the function of its partially dominant a₁⁺ allele. The second mutation (a₂) is amorphous but strongly interacts with a₁.Among the nine possible genotypes at the two loci, five varied in somatic cells. The heterozygous state a₁⁺/a₁ strongly increased the frequency of both spontaneous and induced variations. However, two homozygotes also showed variations.Variants were isolated from induced and spontaneous non-reciprocal and reciprocal variations within paliside tissues by bud induction in vitro. They were genetically tested. In this first paper, only non-reciprocal variations are reported.Green variants from the greenish-yellow (J¹) dihybrid a₁⁺/a₁a₂⁺/a₂ clone had two genotypes: the first was due to true reversions of a₁ to a₁⁺, whereas the second was due to amorphous a₁⁰ mutations from a₁. These a₁⁰ mutations may well be deletions.The lightest yellow variants from J¹ were due to mutations either from a₁⁺ into a₁ or from a₂⁺ into a₂.Deletions at the a₁⁺?a₁ locus led to either yellow variations when a₁⁺ was lost, or to false reversions when the antagonistic allele a₁ was lost.Amorphous alleles at the a₁⁺?a₁ locus were also isolated from tissues other than J⁺. They gave zygotic lethality (s) that probably varied with the size of the deletions. Thus, true reversions and deletions at the a₁⁺?a₁ locus could be distinguished from one another by progeny tests.Other variants showed higher frequencies of spontaneous variations (instability). Somatic changes observed in these unstable systems were due to modifications at the marker loci. The genetic nature of this instability is not yet known.There is strong evidence that the genetic events involved in these non-reciprocal variations were deletions, conversions and point mutations. True reversions from a₁ into a₁⁺ and new mutations from a₁⁺ into a₁ were obtained only from a₁⁺/a₁. It was therefore supposed that the changes observed took place only in heterozygotes, and the conversion hypothesis was made. Attempts are being made to prove that conversions do exist in higher plants, and to find out if this process, as deletions, is induced by radiation.     

Cytogenetic characterization of ten araneomorph spiders (Araneae): Karyotypes and meiotic features

Karyotypes, sex chromosome systems and meiotic characteristics are reported for ten spider species belonging to the families Gnaphosidae, Philodromidae, Salticidae, Oxyopidae and Sicariidae by using standard Giemsa staining. The male diploid numbers (2n) and sex chromosome systems are as follows: Berinda hakani 2n = 22 (X₁X₂), Berinda ensigera 2n = 22 (X₁X₂), Trachyzelotes lyonneti 2n = 22 (X₁X₂), Trachyzelotes malkini 2n = 22 (X₁X₂), Zelotes caucasius 2n = 22 (X₁X₂) (Gnaphosidae); Thanatus pictus 2n = 28 (X₁ X₂), Tibellus macellus 2n = 24 (X₁ X₂) (Philodromidae); Neon reticulatus 2n = 21 (X₀) (Salticidae); Peucetia virescens 2n = 28 (X₁X₂) (Oxyopidae) and Loxosceles rufescens 2n = 21 (X₁ X₂Y) (Sicariidae). All species have monoarmed chromosomes with the exception of L. rufescens that has biarmed (metacentric and submetacentric) chromosomes. The obtained data are the first results for the genera Berinda, Trachyzelotes and Neon. Additionally, with the exception of L. rufescens, all species are being chromosomally analyzed for the first time.     

Mesophyll conductance variations in response to diurnal environmental factors in Myrcia paivae and Minquartia guianensis in Central Amazonia

Mesophyll conductance (g _m) is essential to determine accurate physiological parameters used to model photosynthesis in forest ecosystems. This study aimed to determine the effects of time of day on photosynthetic parameters, and to assess the effect of using either intercellular CO₂ concentration (C _i) or chloroplast CO₂ concentration (C _c), on maximum carboxylation velocity of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco), V _cmax. We used Amazonian saplings of Myrcia paivae and Minquartia guianensis. Photosynthetic parameters were measured using an infrared gas analyzer (IRGA); g _m was determined using both gas exchange and chlorophyll (Chl) a fluorescence and gas-exchange data alone. Leaf thickness (L _T) and specific leaf area (SLA) were also measured. Air temperature, relative humidity or understory light did not correlate with g _m and on average daily IRGA-fluorometer-determined g _m was 0.04 mol(CO₂) m^?2 s^?1 for M. paivae and 0.05 mol(CO₂) m^?2 s^?1 for M. guianensis. Stomatal conductance (g _s), g _m, electron transport rate (J _F), and light-saturated net photosynthetic rate (P _Nmax) were lower in the afternoon than in the morning. However, no effect of time of day was observed on V _cmax. L _T and SLA did not affect any of the examined parameters. IRGA-determined g _m was almost the double of the value obtained using the IRGA-fluorescence method. V _cmax values determined using C _c were about 25% higher than those obtained using C _i, which highlighted the importance of using C _c in V _cmax calculation. Decline in P _Nmax at the end of the afternoon reflected variations in g _s and g _m rather than changes in V _cmax. Diurnal variation in g _m appeared to be associated more with endogenous than with atmospheric factors.     

ESEEM and Mössbauer studies of the ferriheme model compound bis(3-aminopyrazole)tetraphenylporphyrinatoiron(III) chloride, [TPPFe(NH2PzH)2]Cl

A model heme complex, bis(3-aminopyrazole)tetraphenylporphinatoiron(III) chloride, [TPPFe (NH₂PzH)₂]Cl, for which the EPR g-values lead to a rhombicity V/Δ=1.2 if g _zz is the largest g-value, have been investigated by electron spin echo envelope modulation (ESEEM) and Mössbauer spectroscopies. The ESEEM studies focus on the proton sum frequency peaks at near twice the proton Larmor frequency. Analysis of the distant proton peak (mainly due to the pyrrole-H) at exactly twice the proton Larmor frequency shows conclusively that g _zz is aligned along the normal to the porphyrin plane, and thus the electron configuration is (d _xy )²(d _xz ,d _yz )³, with g _zz >g _yy >g _xx . This system is thus another violation to Taylor's "proper axis system" rule. The near proton (the α-H and N-H of the axial ligands) peaks provide distance information for those protons from the metal. Magnetic Mössbauer studies of the same complex confirm the (d _xy )²(d _xz ,d _yz )³ ground state and indicate that, as is the case for cytochrome P450_cam, A _xx is the largest magnitude A-value, and is negative in sign. Other low-spin iron(III) porphyrinates also have A _xx of negative sign, but usually the magnitude is only about half that of A _zz , which is always positive in sign.     

Hydrophobic hydration processes: General thermodynamic model by thermal equivalent dilution determinations

The “hydrophobic hydration processes” can be satisfactorily interpreted on the basis of a common molecular model for water, consisting of two types of clusters, namely W_I and W_II accompanied by free molecules W_III. The principle of thermal equivalent dilution (TED) is the potent tool (Ergodic Hypothesis) employed to monitor the water equilibrium and to determine the number ξ_w of water molecules W_III involved in each process. The hydrophobic hydration processes can be subdivided into two Classes: Class A includes those processes for which the transformation A(−ξ_wW_I → ξ_wW_II + ξ_wW_III + cavity) takes place with the formation of a cavity, by expulsion of ξ_w water molecules W_III whereas Class B includes those processes for which the opposite transformation B(−ξ_wW_II − ξ_wW_III → ξ_wW_I − cavity) takes place with reduction of the cavity, by condensation of ξ_w water molecules W_III. The number ξ_w depends on the size of the reactants and measures the extent of the change in volume of the cavity. Disaggregating the thermodynamic functions ΔH_app and ΔS_app as the functions of T (or lnT) and ξ_w has enabled the separation of the thermodynamic functions into work and thermal components. The work functions ΔG_Work, ΔH_Work and ΔS_Work only refer specifically to the hydrophobic effects of cavity formation or cavity reduction, respectively. The constant self-consistent unitary (ξ_w = 1) work functions obtained from both large and small molecules indicate that the same unitary reaction is taking place, independent from the reactant size. The thermal functions ΔH_Th and ΔS_Th refer exclusively to the passage of state of water W_III.Essential mathematical algorithms are presented in the appendices.     

Identification of S-genotypes in Chinese cherry cultivars (Prunus pseudocerasus Lindl.)

Self-incompatibility has been studied extensively at the molecular level in Solanaceae, Rosaceae, and Scrophulariaceae, all of which exhibit gametophytic self-incompatibility. In the present study, we successfully isolated nine S-RNase alleles from cultivars of Chinese cherry by PCR amplification from genomic DNA and stylar cDNA combining with cleaved amplified polymorphic sequence marker. Analysis of amino acid sequences revealed five novel S-alleles, S ₂ , S ₄ , S ₆ , S ₈ , and S ₉ , with respective accession numbers in the NCBI database of EF541168, EF541173, EF541172, FJ628598, and FJ628599. Results showed that “Dongtang” and “Yinzhu” contained six S-alleles (S ₁ , S ₃ , S ₅ , S ₇ , S ₈ , and S ₉ ); “Taishanganying” contained four S-alleles (S ₁ , S ₂ , S ₄ , and S ₆ ); “Daiba”, “Dayingzui”, and “Xiaomizi” contained four S-alleles (S ₁ , S ₂ , S ₅ , and S ₈ ); “Laiyangduanzhi”, “Shuangquanchangba”, and “Daqingye” contained three S-alleles (S ₁ , S ₂ , and S ₈ ). It is interesting that different cultivars collected from the same place hold the same S-genotypes. Moreover, pollination tests and pollen tube growth assays showed that nine cultivars were self-compatible. Chinese cherry presented in this article are naturally polyploidy, which is a very useful material for the study of self-compatibility, and much of this information will be valuable for further work on self-(in)compatibility of fruit tree in Rosaceae.     

The synthesis and reaction kinetics of some Co(IIl) and Cr(III) chloro complexes of 1,4,8-Triazaoctane (2,3-tri) and the isolation of chiral trans-dichloro [CoCl2(NH3)(2,3-tri)] ClO4

The reaction of 2,3-tri with CrCl₃·6H₂O₁, dehydrated in boiling DMF, results in the formation of mer-CrCl₃(2,3-tri) and anation of hydrolysed solutions of mer-MCl₃(2,3,-tri) (M=Co, Cr) with 6 M HCl containing HClO₄, forms trans-dichloro- mer-[MCl₂(2,3-tri)(OH₂)]ClO₄·H₂O (M=Cr, Co; I, II). trans-Dinitro-mer-[Co(NO₂)₂(NH₃)(2,3-tri)] ClO₄ crystallises from the reaction between mer-Co(NO₂)₃(2,3-tri) and aqueous 7 M ammonia, on addition of NaClO₄·H₂O, and trans-dichloro-mer-[CoCl₂(NH₃)(2,3-tri)]ClO₄ (III) can be isolated by treatment of the dinitro with 12 M HCl. Reaction of mer-CoCl₃(2,3-tri) with C₂O₄₂⁻, followed by addition of aqueous NH₃ and NaClO₄·H₂O results in the isolation of racemic mer-[Co(ox)(NH₃)(2,3-tri)]ClO₄· H₂O. This complex was resolved into its enantiomeric forms and treatment of these with SOCl₂/MeOH/ HClO₄ gave the chiral forms of trans-dichloro-mer- [CoCl₂(NH₃)(2,3-tri)]ClO₄ (R or S at the see-NH center). The rates of loss of the first chloro ligand from these dichloro complexes have been measured spectrophotometrically in 0.1 M HNO₃ over a 15 K temperature range to give the following kinetic parameters; (I) k_H(298)=7.25 × 10⁻⁵ s⁻¹, E_a=78.5 kJ mol⁻¹, δS₂₉₈^#=₋69 J K⁻¹ mol⁻¹; (II) k_H(298)=4.00 × 10⁻³ s⁻¹, E_a=89.9, δS₂₉₈^#= +87.5; (III) k_H(298)=3.09 × 10⁻⁴ s⁻¹, E_a=103, δS₂₉₈^#=+27. Treatment of the dichloro cations with Hg²⁺/HNO₃ results in the generation of mer- M(2,3-tri)(OH₂)₃³⁺ (M=Cr, Co; IV, V) and trans- diaqua-mer-Co(NH₃)(2,3-tri)(OH₂)₂³⁺ (VI). The Co(III) cations isomerise to the fac configuration with (V) K_isom(298) μ=1.0 M)=2.97 × 10⁻⁵ s⁻¹, E_a=115, δS₂₉₈^#=+46. (VI) K_isom(298) (μ=1.0 M)=4.13 × 10⁻⁵ s⁻¹, E_a=113, δS₂₉₈^#=+52.