Observations on the taxonomic composition and vertical distribution of cyclopoid copepods in the central Red Sea

The taxonomic composition and vertical distribution of cyclopoid copepods, including very small species, in the central Red Sea were analyzed. Samples were taken in a multiple opening and closing net with 0.1 mm mesh size to a depth of 450 m. Most species belong to the genus Oncaea (13 identified and 6 unidentified forms). Nearly one half of these are smaller than 0.4 mm in length. Nine cyclopoid species and three groups of very similar species and forms of Oncaea predominate. In the upper 450 m of the water column, each of these species or groups account for more than 1 % of all cyclopoid specimens. In the epipelagic zone (0–100 m) Oithona simplex predominates, accounting for 20 % of the total. In the upper mesopelagic zone Paroithona sp. and one of the unidentified Oncaea forms are most numerous from 100 to 250 m, and two groups of Oncaea are most abundant from 250 to 450 m. The dominance of single species among cyclopoids is less pronounced than that reported for calanoids in the mesopelagic zone of the central Red Sea.     

Hydroacoustic monitoring of the distribution,density and the mass-removal of pelagic fish in a eutrophic lake

A large scale biomanipulation of pelagic fish by trawling was started in the eutrophic Enonselkä basin (26 km²) of Lake Vesijärvi to improve the water quality which had remained poor in spite of the termination of nutrient loading. The distribution and density of the fish were studied by hydroacoustics before and during the removal. The initial annual fish density varied between 13 000–21 000 fish ha^–1 in the study area in August 1984–89. The mass-removal of the fish by pelagic trawling took place in 1989–1992. The catch varied annually between 64 and 92 kg ha^–1. Roach (Rutilus rutilus (L.)) and smelt (Osmerus eperlanus (L.)) accounted for c. 85% of the weight of the catch. The mass-removal decreased the pelagic fish density in the Enonselkä basin during the trawling. An increase in the density was observed after the trawling ceased in these years, and the initial density level was reached within one month. The density level after mass-removal remained high compared with oligotrophic lakes. The pelagic fish had a diurnal ascending trend with the decreasing light intensity in August, and the fish were significantly (p < 0.01) higher in the water mass in temperature non-stratified water in autumn than in stratified water in summer. The fish were somewhat deeper in the years of mass-removal than before it. Mass-removal did not affect the individual length of the echosurveyed fish. Fish smaller than c. 15 cm (TS < –44 dB; mainly smelt) were numerically dominant throughout the whole study period.     

Species composition and pattern of fish distribution in Siberia

At the end of the first half of the 20th century, 61 species and subspecies of fish, including one invader (bleak Alburnus alburnus) and 17 species—endemics of Baikal—were reported for Siberia (Berg, 1933, 1949). At the present time, in rivers, lakes, and reservoirs of Siberia, 96 fish species and subspecies are described, of which 80 are aboriginal and 16 are invaders; 33 species are endemics of Baikal. Each landscapegeographic zone of Siberia has its specific ichthyofauna: in rivers and lakes of the south of Siberia, species of boreal piedmont complex dominate; in water bodies of the steppe, forest-steppe, taiga, and southern parts of the forest-steppe zone boreal plain dominates; in the zone of tundra, arctic freshwater dominates; and in Baikal, the most part (35) of species belongs to the Baikal autochtonous complex. Most researchers, as before, distinguish in Siberia two ichthyogeographic sites—West Siberian and East Siberian—that enter the Arctic Province of the Circumpolar subregion of the Holarctic region. Baikal is considered in the rank of the suboblast of the Holarctic.     

Preliminary investigation of Okhotsk Sea ice algae; taxonomic composition and photosynthetic activity

Okhotsk Sea pack ice from Shiretoko in northern Hokkaido, sampled in March 2007, contained microalgal communities dominated by the centric diatoms Thalassiosira nordenskioeldi and T. punctigera. Domination by this genus is very unusual in sea ice. Communities from nearby fast ice at Saroma-ko lagoon were dominated by Detonula conferavea and Odontella aurita. Average microalgal biomass of the Okhotsk Sea pack ice (surface and bottom) was 1.59 ± 1.09 μg chla l⁻¹ and for fast ice (bottom only) at nearby Saroma-ko lagoon, 16.5 ± 3.2 μg l⁻¹ (=31.1 ± 5.0 mg chla m⁻²). Maximum quantum yield of the Shiretoko pack ice algal communities was 0.618 ± 0.056 with species-specific data ranging between 0.211 and 0.653. These community values are amongst the highest recorded for sea ice algae. Rapid light curves (RLC) on individual cells indicated maximum relative electron transfer rates (relETR) between 20.8 and 60.6, photosynthetic efficiency values (α) between 0.31 and 0.93 and onset of saturation values (E _k) between 33 and 91 μmol photons m⁻² s⁻¹. These data imply that the pack ice algal community at Shiretoko was healthy and actively photosynthesising. Maximum quantum yield of the Saroma-ko fast ice community was 0.401 ± 0.086, with values for different species between 0.361 and 0.560. RLC data from individual Saroma-ko fast ice algal cells indicated relETR between 55.3 and 60.6, α values between 0.609 and 0.816 and E _k values between 74 and 91 μmol photons m⁻² s⁻¹ which are consistent with measurements in previous years.     

Hydroacoustic estimation of fish biomass in the Gulf of Nicoya, Costa Rica

A stratified sampling design was used for a hydroacoustic survey of the inner parts of the Gulf of Nicoya in 1987 and 1988. The bottom topography of the inner Gulf was modeled by introducing the concept of a topographical basin model, as the basis for the projection of the sample survey estimates to the entire inner gulf. The bottom depth contours and volumes for the basin model were constructed from nautical charts. The estimates of sample abundance were made for the fish in the inner Gulf using the acoustic methods, EMS (Expectation Maximization and Smoothing) and echo integration. The estimates of population were made by the multiplication of the topographic model's estimate of water volume and a model of fish density dependent on bottom depth. The results showed a general decrease in fish density biomass with bottom depth, and a simultaneous tendency for maximum concentrations over bottom depths of about four meters. The four meter bottom depth includes a broad expanse of the inner Gulf located south of Isla Chira. Overall estimates of volumetric density (0.269 fish/m3) and of areal densities (1.88 fish/m2) are comparable to other estuarine shallow water environments.     

Species composition and distribution of the freshwater fish fauna of Southern Vietnam

Two hundred and fifty-five fish species occurring in freshwaters in the South of Vietnam are listed. Their geographical distribution is briefly discussed.     

Gelatinous invertebrate zooplankton of the South Adriatic: species composition and vertical distribution

The species composition and vertical distribution of gelatinousinvertebrate zooplankton were investigated from April 1993 toJune 1994 in the 0–1000 m water column at a deep-sea stationin the northern part of the South Adriatic Pit. Fifty-sevenspecies were identified: 11 hydromedusae, 13 calycophores, 3ctenophores, 3 heteropods, 10 pteropods, 8 polychaetes and 9chaetognaths. The pteropod Desmopterus papilio and the heteropodProtatlanta mediterranea were recorded for the first time inthe Adriatic Sea. Data from this study differed from those ofprevious investigations in the South Adriatic as regards thenumerically dominant polychaete and pteropod species. All investigatedgroups generally were more abundant in the upper 100 m and decreasedwith depth. Different vertical distributions of life stageswere observed for those species that occupy a wide depth range:Persa incolorata, Solmissus albescens, Limacina inflata, Cymbuliaperoni, Pelagobia longicirrata, Sagitta lyra and Sagitta decipiens.     

Species composition and distribution of the freshwater fish fauna of the North of Vietnam

Two hundred and three fish species and subspecies occurring in fresh water in the North of Vietnam are listed. The geographical and ecological problems connected with these fishes are discussed.     

Quantity and taxonomic composition of ultramicrobacteria in soils

The number, physiological state, and taxonomic composition of ultramicrobacteria and archaea in various soils (alluvial meadow, sod-podzolic, leached chernozem, and peat) were studied. In all of the tested soil samples, a large number of ultramicrobacteria (tens and hundreds of millions of cells per 1 g of soil) was revealed by fluorescence microscopy. The portion of cells with intact membranes was larger among ultra-microbacteria than among the ordinary-size cells (95–98 and 50%, respectively). Ultramicrobacteria were characterized by high taxonomic diversity and included representatives of the main phylogenetic groups widespread in soils, such as Archaea, Actinobacteria, Cytophaga, and Proteobacteria. The results indicate that ultramicrobacteria are widespread in soils in a viable state and are involved in soil processes.     

Condition, buoyancy and the distribution of larval fish: implications for vertical migration and retention

A Lagrangian time-stepping model driven by water density, daytimelarval feeding and swimming, and by condition-related larvalbuoyancy was used to track the vertical position and conditionof individual larval cod (Gadus morhua L.) in a stratified watercolumn. The model results can explain the variety of frequencies,phases and amplitudes of vertical migration (including inversevertical migrations and increased dispersion at night) observedin field studies. Vertical distributions and conditions of post-yolk-saclarvae, derived from the model during day and night, are alsoconsistent with comparable field observations. When verticalshear is introduced into the model, a simple localized larvalretention mechanism, directly related to feeding, conditionand buoyancy, is revealed. The model results also demonstrateincreased shear dispersion (dilution) of poor-condition larvaerelative to good-condition larvae, and may be used to explainthe relative paucity of observations of dying or dead larvaein the field, Virtually all of the model results are directlytestable in the field and/or laboratory, and we show how thefindings may be directly applicable to larvae possessing functionalswim bladders and perhaps to freshwater and marine invertebratezooplankton.     

Abundance and daytime vertical distribution of planktonic fish larvae in an oligotrophic South Island lake

The vertical distribution of common bully (Gobiomorphus cotidianus) and koaro (Galaxias brevipinnis) larvae in the limnetic zone of Lake Coleridge were determined using a high-frequency (200 KHz) echosounder. Planktonic bully larvae first appeared in appreciable numbers in January. By February, they formed a scattering layer between depths of 12 to 24 m during the day, where they achieved a maximum density of 0.59 fish m^-3. Larger (> 18mm) fish migrated to the littoral zone and densities declined to < 0.01 fish m^-3 by July, when remaining larval fish occupied greater daytime depths. Their vertical distribution during the day appeared to be influenced mainly by light levels and water temperatures. Larvae grew more slowly (0.12 mm d^-1) than in more productive North Island lakes, and were also present in lower densities for a more restricted period of time. Koaro larvae first appeared in November and December and were found in low numbers (< 0.01 fish m^-3) in summer at depths of 10 to 26 m. Salmonid production in the limnetic zone is probably limited by the small size and relative scarcity of forage fish present.     

Latitudinal gradient in the taxonomic composition of parasite communities

Although latitudinal gradients in diversity have been well studied, latitudinal variation in the taxonomic composition of communities has received less attention. Here, we use a large dataset including 950 surveys of helminth endoparasite communities in 650 species of vertebrate hosts to test for latitudinal changes in the relative contributions of trematodes, cestodes, nematodes and acanthocephalans to parasite assemblages. Although the species richness of helminth communities showed no consistent latitudinal variation, their taxonomic composition varied as a function of both host type and latitude. First, trematodes and acanthocephalans accounted for a higher proportion of species in helminth communities of fish, whereas nematodes achieved a higher proportion of the species in communities of bird and especially mammal hosts. Second, the proportion of trematodes in helminth communities of birds and mammals increased toward higher latitudes. Finally, the proportion of nematodes per community increased toward lower latitudes regardless of the type of host. We present tentative explanations for these patterns, and argue that new insights in parasite community ecology can be gained by searching for latitudinal gradients not only in parasite species richness, but also in the taxonomic composition of parasite assemblages.     

Hydroacoustic fish biomass assessment in man-made lakes in Tunisia: horizontal beaming importance and diel effect

We used a Simrad EK60 echosounder equipped with two split-beam transducers to develop a sampling strategy for assessing fish resources in Tunisian man-made lakes. Day and night surveys, using vertical and horizontal beaming, were carried out between December 2006 and February 2007, a period when fish catchability is high. Four reservoirs with differing surface areas and bathymetries were selected. Echogram analysis revealed that fish communities were mainly composed of individual targets. A few schools were detected near the surface during daylight, but these schools dispersed slightly at night. In these multispecies reservoirs, considerable day and night differences in density existed, but with no clear trend. Target strength (TS) distribution mode values detected at night were always lower or equal to daytime values. Biomass estimates were significantly higher during daytime in three reservoirs, corresponding with higher TS modal values. In the other reservoir, the biomass estimate was significantly higher during nighttime corresponding with higher mean density during this period. Using only a vertically aimed transducer in our study reservoirs would have led to an underestimate of density and biomass by 5–100% and 20–100%, respectively, depending on the man-made lake. We conclude that acoustic sampling in our reservoirs must be done during day and night and that both vertical and horizontal beaming must be used to obtain the best possible picture of the fish stocks.     

The effect of landscape composition and configuration on the spatial distribution of temperate demersal fish

In contrast to the terrestrial environment, where the use of landscape analyses has been clearly demonstrated, the influence of landscape composition and configuration on the abundance and spatial distribution of marine organisms remains poorly understood. Development of this area of marine research has been limited by the lack of accurate benthic habitat maps, particularly for marine environments deeper than can be penetrated by optical remote sensing (<10 m). However, the recent availability of detailed (1:25 000) and accurate habitat maps derived from hydroacoustic surveys of deeper marine waters has redressed this situation. The aim of this research was to establish the strength and significance of derived landscape composition and configuration indices on the demersal fish assemblage structure and spatial distribution. A combination of depth and 6 landscape measures were found to explain 34.8% of the variation in the fish assemblage. Depth contributed the highest percentage of the variance explained, accounting for 23.7%. Distance to reef was the most important landscape index explaining 7.1% of the variability, followed by total length of edge environment (the interface between different benthic substrates) explaining 1.5%. Species responsible for driving the structure of the fish assemblage were also examined and found to respond not only to the proximity of reef but also to the configuration of the reef. For example, Parika scaber and Pseudolabrus psittaculus characterised more heterogeneous landscapes offering clusters of small interconnected patches of reef with a lot of edge environment, whilst juvenile Trachyurus novaezelandiae and Platycephalus caeruleopunctatus preferred more homogeneous landscapes offering little reef or edge environment. This research demonstrated that a broad scale landscape analysis, employing indices of landscape composition and configuration, is important for understanding demersal fish assemblage structure and spatial distribution.     

Data composition and taxonomic resolution in macroinvertebrate stream typology

In the EU water framework directive (WFD) a typological framework is defined for assessing the ecological quality of water bodies in the future. The aim of this study was to test the effect of data composition and taxonomic resolution on this typology. The EU research projects AQEM and STAR provided 1660 samples of 48 stream types sampled all over the major geographical gradients in Europe. These stream types fit the WFD typological demands and fit to the major European geographic regions (ecoregions). The samples included gradients from reference conditions to samples with bad ecological quality. Despite standardisation, there were large differences between the participating countries concerning the number of taxa, the number of specimens, and the taxonomic resolution. The macroinvertebrate data were analysed by using detrended correspondence analysis (DCA). The distribution patterns using all samples, only reference samples, and only degraded samples showed that the use of species-level (or ‘best available taxonomic’ level) performed better at a practical (fine) scale in comparison to family-level. The analyses further showed that even the use of a standardised protocol can not easily overcome (i) differences in site conditions that force the researcher to deviate from the protocol as well as (ii) the experiences of the researcher(s) and (iii) the available taxonomic knowledge.     

Diel variation in feeding and vertical distribution of ten co-occurring fish species: consequences for resource partitioning

The diel variations in feeding behaviour and vertical distribution were determined for ten species of a tropical fish community in a shallow SE Sri Lankan reservoir. The fish community consisted of two introduced exotic tilapias and eight indigenous riverine species including five cyprinids, one clarid, one hemiramphid and one gobid. Multi-mesh gillnets dividing the water column in six depth strata were set with a six-hour interval throughout four 24-hour periods. The study of the diel variation in feeding behaviour was based on analysis of catch data, gut contents and gut fullness per setting time. The diel variation in vertical distribution was determined per species for each of the six depth-strata. Feeding behaviour and vertical distribution differed significantly among species and for most species throughout the 24-hour period. Feeding behaviour and vertical distribution were correlated. The status of whether or not a fish is feeding determines if the trophic and spatial resource dimensions are interrelated. Resource partitioning along the spatial dimension may reduce exploitative competition at the time of feeding, whereas it may limit interference competition or predation during non-feeding periods. This revised version was published online in July 2006 with corrections to the Cover Date.     

Diel variation in the vertical distribution of fish and plankton in Lake Kinneret: a 24-h study of ecological overlap

Diel vertical migration (DVM) behaviour is a predator avoidance mechanism observed within many zooplankton species in the presence of zooplanktivorous fish. A 24-h survey was carried out in June 1998 to investigate diel variation in the vertical distribution of fish, zooplankton and phytoplankton (chlorophyll) in Lake Kinneret, Israel. Fish revealed diel variation in vertical distribution but had no spatial overlap with zooplankton, and consequently no apparent influence on zooplankton dispersal. Zooplankton revealed some diel variation in distribution being affected by thermocline and oxycline position and movement of the internal the internal seiche wave. Cyclopoid species closely follow the movement of the seiche wave implying that, due to their greater motility, they are following conditions that are suitable to them. The Cladocera species and small rotifers only partly, which may be part of their phototaxic behaviour. Physical forces like convection, horizontal and vertical forcing probably have a role in contributing to a homogeneous distribution of the plankton by preventing stratification or interfering with the more motile zooplankton which may be attempting to migrate.     

The influence of fish kairomones on the induction and vertical distribution of sexual individuals of the Daphnia galeata species complex

To assess the potential production of hybrids and backcrosses in a semi-natural environment, we studied the combined effect of fish kairomone, and food level on the production of males and ephippial females in different clones of five Daphnia taxa from the D. galeata species complex. We also studied the diel vertical migration (DVM) of these sexual daphnids under the same varying conditions. This was done to test the hypothesis that males and ephippial females have different migrating strategies, which would increase their mating probability. The study was carried out in two large-scale indoor mesocosms, the so-called `plankton towers' in the Max-Planck Institute in Plön, Germany.Although all of the Daphnia taxa produced ephippial females in the course of the experiment, only D. galeata produced a significant number of males. Fish kairomones had a significant negative influence on the production of ephippial females. We found no DVM in the D. galeata males. They stayed at a depth between 5 and 6 m both day and night, 1 or 2 m above the thermocline. The ephippial females of D. cucullata x hyalina migrated, whereas ephippial females of the other taxa showed no DVM but came significantly closer to the surface in the presence of fish kairomones. We conclude that males and sexual females co-occur in this species complex both in time and space. Therefore, a regular production of hybrids and backcrosses in this species complex seems likely. Fish kairomones do not seem to significantly influence this process.     

Partial diel vertical migrations in pelagic fish

1. Field studies on diel vertical migration (DVM) usually report uniform behaviour with population-wide ascents and descents during crepuscular periods. This contrasts partial seasonal migrations of many animal populations, where individuals choose either the resident or the migrant strategy depending on population density, feeding opportunity and predation risk in the resident and migrant habitats. 2. We tested whether DVM of freshwater zooplanktivorous fish (Coregonus spp.) resembles partial migrations. Twenty-eight hydroacoustic surveys were performed in the deep Lake Stechlin (Germany) between 2000 and 2010, with samplings encompassing all months between March and December. Zooplankton samples were simultaneously taken in epilimnetic and hypolimnetic layers. Fish obtained from depth-stratified samplings by a midwater trawl were used to test for individual differences between residents and migrants. 3. We show for the first time that DVMs of freshwater fish resemble patterns of partial migrations often found in seasonal environments. Across all samplings, 7-33% of fish did not ascend at dusk, but exhibited the resident strategy. The proportion or residents increased at low zooplankton feeding rates in the daytime habitat and during months when the temperature difference between daytime and night-time habitats was minor. 4. Slightly larger size and higher caloric density of migrants over residents in one of the coexisting Coregonus species suggested that individual differences contributed to the migration strategy performed. However, these results were based on one sample only, and extrapolation to the entire data set is not possible. 5. Our results are indirect evidence that the balance between migrants and residents may primarily depend on the trade-off between feeding gains and metabolic and predation costs of migration. However, the results also suggest that the global fitness consequences for the resident and migrant strategies may not be identical, rendering the importance of individual traits in the 'decision to migrate' likely.