Purification and properties of enolase from swine kidney

The first, enolase (2-phospho-d-glycerate hydrolyase, EC 4.2.1.11) to be isolated from a gluconeogenic tissue, swine kidney, was purified more than 600-fold to near homogeneity, as estimated from sedimentation equilibrium and velocity measurements and from disc electrophoresis patterns. The physical properties of the enzyme were examined. Purified kidney enolase has a s^0.87%_20,w = 5.87 S, M_r = 90,000 ± 4,500, e^0.1%_280,1cm = 1.07/mg/ml, a Stokes radius of 37.0 Å, and an apparent subunit molecular weight of 52,000.The amino acid composition was determined and compared with those of mammalian muscle enolases. The partial specific volume calculated from the amino acid composition was found to be 0.728 cc/g. Swine kidney enolase had 12 cysteines per mole; in the native enzyme, two reacted with DTNB.The enzyme was stabilized by magnesium, sucrose, or glycerol; activity lost, on prolonged storage could be completely recovered by treatment with mercaptoethanol and EDTA at 37 °C. Some evidence was obtained for the existence of active monomers of this enzyme. This form of swine kidney enolase was quite unstable, however. The pH optimum was at 6.8. The Michaelis constants for 2-phospho-d-glycerate and phosphoenolpyruvate were 5.10^?5m and 10^?4m; that for magnesium was 4.10^?4m. Substrate inhibition was found for 2-phosphoglycerate but not for phosphoenolpyruvate. No inhibition is seen under comparable conditions with mammalian enolases from glycolytic tissues. This finding is discussed.     

The purification and partial amino acid sequence of a polypeptide from the glutelin fraction of rice grains; homology to pea legumin

The glutelin fraction was extracted from grain meals of rice (Oryzea sativa) with 50 mM Tris-HCl buffer (pH 8.8) containing 6 M urea and 10 mM 2-mercaptoethanol. Polypeptides of glutelin were separated and purified by ion-exchange chromatography under denaturing conditions. Analysis by two-dimensional gel electrophoresis showed that 2 major polypeptides of the rice glutelin fraction, M_r 36 000 and 22 000, were linked in disulphide bonded pairs containing one M_r 36 000 and one M_r 22 000 subunit. A partial amino acid sequence of the purified M_r 22 000 glutelin subunit showed it to be homologous to the β-subunit of pea legumin, a storage protein which also contains disulphide-linked subunit pairs (M_r 38 000 and M_r 22 000). It is therefore proposed that the major component of rice glutelin is a legumin-like protein.     

L-Phenylalanine ammonia-lyase from Phaseolus vulgaris: partial degradation of enzyme subunits in vitro and in vivo

L-Phenylalanine ammonia-lyase (EC 4.3.1.5) has been purified from suspension cultured cells of French bean (Phaseolus vulgaris L.) which had been exposed to polysaccharide elicitor preparations from the cell walls of the phytopathogenic fungus Colletotrichum lindemuthianum. After preliminary purification by ammonium sulphate fractionation and gel filtration, the enzyme was further purified by (a) ion-exchange chromatography followed by chromatofocussing, (b) chromatography on rabbit anti-(phenylalanine ammonia-lyase) IgG, or (c) affinity chromatography on L-aminooxy(p-hydroxyphenyl)propionic acid (or L-tyrosine) linked to epoxy-activated Sepharose 6B via the phenolic hydroxyl group. The purified enzyme preparations exhibited subunit M_r values of 77 000, 70 000 and 53 000, the relative proportions of these depending upon the enzyme source, length of time taken for purification, and inclusion of freeze-thaw steps. Four forms of the enzyme, differing in pI value, were resolved by chromatofocussing, although all forms from the same preparation consisted of similar proportions of the different subunit M_r forms. Peptide mapping and freeze-thaw studies indicate that the M_r 77 000 native phenylalanine ammonia-lyase subunit is inherently unstable in vitro and breaks down to yield the lower M_r partial degradation products. Such products could also be observed following in vitro translation of phenylalanine ammonia-lyase mRNA. Pulse-chase experiments indicated that the 77 000 → 70 000 → 53 000 subunit interconversion also occurs in vivo.     

Handbook of Biosolar Resources : Vol. 1, parts 1 and 2, ‘Basic Principles’ Edited by A. Mitsui and C.C. Black (Editor-in-Chief,O.R. Zaborsky) CRC Press; Boca Raton,USA, 1982 643 pages. $95.00 each part; approx. £113 for both parts

Glycerate kinase from spinach leaves was purified to near homogeneity using PEG/MgCl₂ fractionation, ion exchange, molecular sieving and affinity chromatography. The purified enzyme is a monomer of M_r 40 000, shows a pI-value of 4.8 and a broad pH optimum of 6.5–8.5 and is specific for D-isomer of glycerate. The high activity of crude enzyme (≈ 150 μmol. h^?1.mg chl^?1) indicates that glycerate kinase does not limit the oxidative photosynthetic carbon cycle.     

Molecular weights of glycollate oxidase from C3 and C4 plants determined during early stages of purification

The M_rs of glycollate oxidase (EC 1.1.3.1) (GAO) determined soon after extraction from the leaves of several C₃ and C₄ plants are reported. The enzyme isolated from the C₃ plants wheat, barley, spinach, pea and tobacco has M_r in the range 160–180 000 and is probably a homotetramer. GAO purified from pea was previously reported as a dimer and as an octamer from spinach leaves. Therefore the quaternary structure of these GAOs soon after extraction differs from that of the purified proteins. The enzymes from the C₄ plants maize and sugar cane have M_rs ca twice this value in the range 290–310 000, whilst that of the C₄ grass Panicum maximum has an M_r of 162 000. An improved spectrophotometric assay for GAO, using a non-carcinogenic dye, is described.     

Purification and characterization of the messenger ribonucleoprotein-associated casein kinase II of Artemia salina cryptobiotic gastrulae

The mRNP-associated protein kinase is purified to near homogeneity by ion-exchange chromatography on phosphocellulose and affinity chromatography on casein-Sepharose 4B and ATP-agarose. The cyclic nucleotide-independent enzyme phosphorylates casein using either ATP or GTP. The enzyme exists in two forms composed of subunits with M_r 36 500 (α) and 28 000 (β) and of subunits with M_r 36 500 (α), 33 000 (α′) and 28 000 (β). The undegraded enzyme has an M_r of 136 000 ± 7000. The enzyme is inhibited by heparin and hemin and stimulated by spermine. The mRNP-associated protein kinase may be classified as a casein kinase II. Main mRNP protein phosphate acceptors have M_r values of 112 000, 72 000, 65 000, 53 000, 38 000, 28 000, 23 500 and 21 000. Phosphorylation of the M_r 38 000 poly(A)-binding protein resulted in the generation of different acidic ionic species. From the observed inhibition of the translational activity after phosphorylation by the mRNP-associated protein kinase a function in the repression of mRNP is proposed.     

Characterization of the amine oxidase involved in the growth of Trichosporon cutaneum X4 on ethylamine as source of carbon,nitrogen and energy

The amine oxidase from Trichosporon cutaneum X₄ grown on ethylamine as carbon, nitrogen and energy source was purified to near homogeneity. The purified enzyme showed the highest resistance to heat of any amine oxidase hitherto characterized from a yeast (half-life at 62°C, 14 min). Measurement of kinetic parameters as a function of carbon chain length showed results typical of a benzylamine oxidase. Both non-denaturing- and sodium dodecyl sulphate-polyacrylamide gel electrophoresis showed multiple bands, and dimethyl suberimidate cross-linking studies revealed that the enzyme consisted of multimers of two polypeptide chains of M_r respectively 19,000 and 26,000. The smallest structure to show activity probably contained two of each kind of subunit.Abbreviation SDS sodium dodecyl sulphate     

Purification of the activating enzyme for the Fe-protein of nitrogenase from Azospirillum brasilense

The activating enzyme for the Fe-protein of nitrogenase from Azospirillum brasilense has been purified to near homogeneity. The procedure includes ion-exchange chromatography, chromatofocusing and gel filtration. The M_r of the purified enzyme was determined to be 33 500 on SDS-polyacrylamide gel electrophoresis. The purified enzyme was compared with the acticating enzyme from Rhodospirillum rubrum.     

Long-chain saturated fatty acids can be α-oxidised by a purified enzyme (Mr 240 000) in cucumber (Cucumis sativus)

An enzyme (M_r 240 000) with high fatty acid α-oxidation activity has been purified from the fruit of cucumber (Cucumis sativus). The specific α-oxidation activity in the purified fraction was 370 nmol/min per mg protein determined as liberation of ¹⁴CO₂ from [1-¹⁴C]palmitic acid. α-Oxidation activity was observed both in the 12 000×g pellet and 150 000×g pellet by differential fractionation of cucumber homogenate. The enzyme was purified about 220-fold to near homogeneity from a 12 000×g fraction by solubilisation with Triton X-100R, ammonium sulphate precipitation, hydrophobic interaction and anion-exchange chromatographies and Superose 12 gel filtration. The molecular mass of the native enzyme was 240 000, and the major subunit molecular mass of 40 000 indicated an oligomeric structure.     

Purification of an elicitor-induced glucan synthase (callose synthase) from suspension cultures of French bean (Phaseolus vulgaris L.): purification and immunolocation of a probable Mr-65 000 subunit of the enzyme

Membrane preparations from suspension-cultured cells of French bean (Phaseolus vulgaris L.) contained callose synthase (EC 2.4.1.34) activity which was preserved upon solubilisation. Following elicitor treatment of cell cultures, increased activity could be extracted and this increase was maintained during purification. The enzyme was purified by high-pressure liquid chromatography and active fractions showed a variable association of two polypeptides of relative molecular masses (M_r) 55 000 and 65 000, the latter being in excess. The M_r-65 000 polypeptide was purified to homogeneity and an antibody raised to it. This antibody showed complex effects on callose synthase activity when incubated with membrane and soluble extracts. In comparison with other systems, the M_r-55 000 subunit is likely to represent the catalytic subunit while the M_r-65 000 polypeptide is a possible regulatory subunit. The M_r-65 000 polypeptide was immunolocated in membranes at sites of callose synthesis in the plant, in cell plates, in sieve plates, at the plasma membrane-wall interface of wounded cells and in papillae in infected cells. Received: 18 January 1997 / Accepted: 8 May 1997     

Purification and Partial Characterization of Potato (Solanum tuberosum) Invertase and Its Endogenous Proteinaceous Inhibitor

Invertase plays an important role in the hydrolysis of sucrose in higher plants, especially in the storage organs. In potato (Solanum tuberosum) tubers, and in some other plant tissues, the enzyme seems to be controlled by interaction with an endogenous proteinaceous inhibitor. An acid invertase from potato tubers (variety russet) was purified 1560-fold to electrophoretic homogeneity by consecutive use of concanvalin A-Sepharose 4B affinity chromatography, DEAE-Sephadex A-50-120 chromatography, Sephadex G-150 chromatography, and DEAE-Sephadex A-50-120 chromatography. The enzyme contained 10.9% carbohydrate, had an apparent molecular weight of 60,000 by gel filtration, and was composed of two identical molecular weight subunits (M_r 30,000). The enzyme had a K_m for sucrose of 16 millimolar at pH 4.70 and was most stable and had maximum activity around pH 5. The endogenous inhibitor was purified 610-fold to homogeneity by consecutive treatment at pH 1 to 1.5 at 37°C for 1 hour, (NH₄)₂SO₄ fractionation, Sephadex G-100 chromatography, DEAE-Sephadex G-50-120 chromatography, and hydroxylapatite chromatography. The inhibitor appears to be a single polypeptide (M_r 17,000) without glyco groups. The purified inhibitor was stable over the pH range of 2 to 7 when incubated at 37°C for 1 hour.     

Ribulose-1, 5-bisphosphate carboxylase from comfrey: Isolation and characterization

Ribulose-1,5-bisphosphate carboxylase/oxygenase has been purified to electrophoretic homogeneity from comfrey, Symphytum spp. Sodium dodecyl sulfate polyacrylamide and polyacrylamide gel electrophoresis studies on the purified product showed no extraneous proteins. Comparisons of the electrophoretic mobilities of the subunits to those of standard proteins indicated a large subunit MW of 50 000 and a small subunit of 12 700, which for an octameric structure of each subunit indicates a native MW of 502 000. Specific activities of the comfrey enzyme ranged from 1.2 to nearly 2 μmol ¹⁴CO₂ fixed/min.mg of protein over several preparations and were maintained for months when stored from the sucrose gradient at ? 70°. The specific activities depended critically on the amounts of enzyme used in the assay even under saturating conditions of substrates and cofactors. The effective pH dependence for carboxylase catalysis peaked near 7.4, which apparently is the lowest elective optimum yet reported for this enzyme from any source. However, on a constant carbon dioxide basis the pH dependence profile was reversed with a maximum near pH 8.6 which was 0.4 units higher than the value for the spinach enzyme. The K_ms for carbon dioxide and ribulose-1,5-bisphosphate at pH 7.5 were 130 μM and 30 μM, respectively, which are comparable to the accepted values for the carboxylase from spinach at pH 7.2.     

Isolation of 3-methylcrotonyl-coenzyme A carboxylase from bovine kidney

3-Methylcrotonyl-CoA carboxylase (MCase), an enzyme of the leucine oxidation pathway, was highly purified from bovine kidney. The native enzyme has an approximate molecular weight of 835,000 as measured from exclusion limits by polyacrylamide gel electrophoresis at pH 7.3. Polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulfate demonstrated two subunits, identified as a biotin-free subunit (A subunit; M_r = 61,000) and a biotin-containing subunit (B subunit; M_r = 73,500). The biotin content of the enzyme was 1 mol/ 157,000 g protein, consistent with an AB protomeric structure for the enzyme. The isoelectric point of the enzyme was found to be 5.4. Maximal MCase activity was found at pH 8 and 38 °C in the presence of Mg²⁺ and an activating monovalent cation such as K⁺. Kinetic constants (K_m values) for the enzyme substrates were: 3-methylcrotonyl-CoA, 75 μm; ATP, 82 μm; HCO₃^?, 1.8 mm. Certain acyl-CoA derivatives, including crotonyl-CoA, (2Z)-3-ethylcrotonyl-CoA, and acetoacetyl-CoA, were also substrates for the enzyme. Some data on inhibition of the enzyme by acyl-CoA derivatives, and sulfhydryl- and arginyl-reagents, are presented.     

Spectroscopic properties of spinach catalase

Spinach catalase (hydrogen-peroxide: hydrogen-peroxide oxidoreductase, EC 1.11.1.6) has been purified to homogeneity. The purified enzyme has a specific activity of 25 000 units per mg protein. The presence of 2-mercaptoethanol and phenylmethylsulfonyl fluoride (PMSF) were required for high yields of the enzyme. The molecular weight of the enzyme was estimated to be 125 000 by gel filtration. Subunit analysis by polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulfate revealed a single peptide with M_r 55 000. The enzyme, which exhibits optical absorbance maxima at 279, 403, 542, 592 and 723 nm and shoulders at 290, 500 and 630 nm, contains 2 mol iron per mol protein. One of the two irons can be attributed to protoheme, while the other iron appears to be present in a novel heme. The oxidized catalase exhibited two sets of high-spin, ferriheme EPR signals.     

Purification and characterization of a multifunctional calmodulin-dependent protein kinase from canine myocardial cytosol

A calmodulin-dependent protein kinase from canine myocardial cytosol was purified 1150-fold to apparent homogeneity with a 1.5% yield. The purified enzyme had a M_r of 550,000 with a sedimentation coefficient of 16.6 S, and showed a single protein band with a M_r of 55,000 (55K protein), determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The purified enzyme had a specific activity of 1.6 μmol/mg protein/min, and K_a values of 67 nM and 1.1 μM for calmodulin and Ca²⁺, respectively, using chicken gizzard myosin light chain as substrate. Calmodulin bound to the 55K protein. The purified enzyme had a broad substrate specificity. Endogenous proteins including glycogen synthase, phospholamban, and troponin I from the canine heart were phosphorylated by the enzyme. These results suggest that the purified enzyme works as a multifunctional protein kinase in the Ca²⁺, calmodulin-dependent cellular functions of the canine myocardium, and that the enzyme resembles enzymes detected in the brain, liver, and skeletal muscle.     

Structural and ATP-hydrolyzing properties of the ATP synthase isolated from Wolinella succinogenes

The ATP synthase was isolated from the cytoplasmic membrane of the anaerobic bacterium Wolinella (formerly Vibrio) succinogenes, using a non-ionic detergent. After 20-fold purification the enzyme was homogeneous. The M_r was determined to be 410 000. Gel electrophoresis in the presence of dodecylsulfate separated eight different peptides, seven of which appeared to be subunits of the enzyme (M_r 56 000, 50 000, 36 000, 19 000, 13 000, 11 000 and 8000). Dicyclohexylcarbodiimide (0.6 mol per mol enzyme) was specifically bound to the M_r 8000 subunit. In electron micrographs, after negative staining, the enzyme appeared as a dumb-bell having a globular portion of 10.0–10.8 nm diameter on one end. The K_i for ADP as a competitive inhibitor of ATP hydrolysis was about 10-times smaller than the K_M for ATP. Incorporation of the enzyme into liposomes caused the K_i and K_M to decrease to values that approached those measured with the bacterial membrane. Treatment of the membrane with CHCl₃ was the only procedure found that could split the ATPase from the ATP synthase. The soluble enzyme isolated after this treatment exhibited a 15-times greater specific activity of ATP hydrolysis than ATP synthase. The ATPase was made up of three different subunits (M_r 56 000, 50 000 and 36 000). The M_r was determined to be 340 000. In electron micrographs, after negative staining, the ATPase appeared as spherical particles which were similar to the globular part of the ATP synthase. The particles showed a hexagonal fine structure with a seventh element in the centre of the hexagon, suggesting an α₃β₃ρ composition of the enzyme.     

Simultaneous preparation of the three biotin-containing mitochondrial car☐ylases from rat liver

Affinity chromatography on avidin-Sepharose column was used to bind the biotin-containing car?ylases from rat liver. With a biotin gradient (0–0.3 mM), peaks of activity of pyruvate, propionyl CoA and β-methylcrotonyl CoA car?ylases co-eluted. Subsequent separation of the three car?ylases was attained using DEAE-Sepharose chromatography. Sodium dodecyl sulphate-polyacrylamide gel electrophoresis showed each of the enzymes to be pure, with pyruvate car?ylase giving a single subunit band (M_r 130 000), propionyl-CoA car?ylase giving two bands (M_r 73 000and56500) and β-methylcrotonyl-CoA car?ylase giving two bands (M_r 75 000and60 000. The specific activity of propionyl-CoA car?ylase (15.8 munits/mg) and β-methylcrotonyl-CoA car?ylase (24.2 munits/mg) were comparable with reported activities for these purified enzymes, while that of pyruvate car?ylase (1.25 munits/mg) was low. This is a suitable method for the simultaneous preparation of purified car?ylases for the specific purpose of raising antisera to these enzymes.     

Sulphydryl groups of (Na+ +K+)-ATPase from rectal glands of Squalus acanthias: Titrations and classification

1. (Na⁺ +K⁺)-ATPase from rectal gland of Squlus acanthias contains 34 SH groups per mol (M_r 265000). 15 are located on the α subunit (M_r 106 000) and two on the β subunit (M_r 40 000). The β subunit also contains one disulphide bridge. 2. The reaction of (Na⁺ +K⁺)-ATPase with N-ethylmaleimide shows the existence of at least three classes of SH groups. Class I contains two SH groups on each α subunit and one on each β subunit. Reaction of these groups with N-methylmaleimide in the presence of 40% glycerol or sucrose does not alter the enzyme activity. Class II contains four SH groups on each α subunit, and the reaction of these groups with 0.1 mM N-ethylmaleimide in the presence of 150 mM K⁺ leads to an enzyme species with about 16% activity. The remaining enzyme activity can be completely abolished by reaction with 5–10 nM N-ethylmaleimide, indicating a third class of SH groups (Class III). This pattern of inactivation is different from that of the kidney enzyme, where only one class of SH groups essential to activity is observed. 3. It is also shown that N-ethylmaleimide and DTNB inactivate by reacting with the same Class II SH groups. 4. Spin-labelling of the (Na⁺ +K⁺)-ATPase with a maleimide derivative shows that Class II groups are mostly buried in the membrane, whereas Class I groups are more exposed. It is also shown that spin label bound to the Class I groups can monitor the difference between the Na⁺- and K⁺-forms of the enzyme.     

Homogeneous alkylcysteine lyase of Acacia farnesiana: Fresh seedlings vs. acetone powders

Alkyleysteine lyase (EC 4.4.1.6) was purified essentially to homogeneity from both fresh hypocotyls of 5- to 8-day-old etiolated seedlings of Acacia farnesiana and acetone powders of such hypocotyls. The enzyme from the fresh material had twice the specific activity of that from the acetone powder. Sodium dodecylsulphate gel electrophoresis showed that both enzymes were composed of a subunit of M_rca 42 000. The final enzyme solutions were quite different in their absorbance spectra. The fresh hypocotyl enzyme had an absorbance maximum at 425 nm in addition to the 280 nm protein absorbance. This maximum in the visible region is due to bound pyridoxal phosphate. The acetone powder enzyme had the same maxima and in addition peaks at 498 and 340 nm. The fresh enzyme contained 1.8 mol cofactor/mol enzyme and the acetone powder enzyme 1.0 mol/mol. The KK_m for the probable natural substrate L-djenkolate was the same for both enzymes, 0.8 mM, but the V_max for the fresh was twice that of the acetone powder enzyme. The common practice of using acetone powder preparations for starting material in enzyme purifications would appear to require some caution.