小麦染色体组的起源与进化探讨

对小麦染色体组的起源及其进化进行了全面综述后,提出了一个新的小麦进化途径,并认为：（１）Ｔｒｉｔｉｃｕｍｍｏｎｏｃｏｃｕｍｖａｒｕｒａｒｔｕ是多倍体小麦Ａ组的原初供体,在Ａ组进入多倍体小麦后有Ｔｍｏｎｏｖａｒｂｏｅｏｔｉｃｕｍ的基因渗入;（２）Ｂ和Ｇ组的原初供体是Ｔｓｐｅｌｔｏｉｄｅｓ的Ｓ组,在该Ｓ组进入多倍体小麦后有两个进化方向,即Ｓ组结构分化形成Ｇ组和Ｓ组经外源染色体代换及重组等而进化成Ｂ组;（３）Ｔｔｕｒｇｉｄｕｍ和Ｔｔｉｍｏｐｈｅｖｉ都是来自Ｔｓｐｅｌｔｏｉｄｅｓ为母本与Ｔｍｏｎｏｖａｒｕｒａｒｔｕ杂交后并双二倍化而形成的原初四倍体小麦（ＳＳＡＡ）,并由它分别经遗传渗入和结构分化而成;（４）Ｔｚｈｕｋｏｖｓｋｙｉ是Ｔｔｉｍｏｐｈｅｖｉ作母本与Ｔｍｏｎｏｖａｒｂｏｅｏｔｉｃｕｍ杂交并双二倍化而形成,故它具有分别来自Ｔｍｏｎｏｖａｒｕｒａｒｔｕ和Ｔｍｏｎｏｖａｒｂｏｅｏｔｉｃｕｍ的两类Ａ组;（５）Ｔａｅｓｔｉｖｕｍ的Ｄ组来自Ｔｔａｕｓｃｈｉ;（６）无论Ａ组、Ｂ组、Ｄ组、Ｇ组在进入多倍体小麦后均有相当分化,同时在其供体种中也有一定分化。     

普通小麦基因组最可能的4个供体的ITS1和ITS2序列及其亲缘关系

对普通小麦（ＴｒｉｔｉｃｕｍａｅｓｔｉｖｕｍＬ．）基因组（ＡＡＢＢＤＤ）最可能的供体－Ｔ．ｕｒａｔｒｔｕＴｈｕｍ．（ＡＡ）、Ｔ．ｍｏｎｏｃｃｕｍｖａｒ．ｂｏｅｏｔｉｃｕｍ（Ｂｏｉｓｓ．）ＭＫ（ＡＡ）、ＡｅｇｉｌｏｐｓｓｐｅｌｔｏｉｄｅｓＴａｕｓｃｈ．和Ａｅ．ｔａｕｓｃｈｉｉ（Ｃｏｓｓ．（ＤＤ）的核糖体ＲＮＡ基因ＩＴＳ区进行了ＰＣＲ扩增和克隆,并测定了ＩＴＳ１和ＩＴＳ２的ＤＮＡ序列,讨论和纠正了前人     

青藏高原近缘野生大麦5S rRNA基因染色体原位杂交定位

采用原位杂交技术,以５Ｓ ｒＲＮＡ基因为探针,对产于青藏高原的４份近缘野生大麦和栽培大麦,即：二棱野生大麦Ｈｏｒｄｅｕｍ ｖｕｌｇａｒｅ Ｌ．ｓｓｐ．ｓｐｏｎｔａｎｅｕｍ（Ｋｏｃｈ）Ｈｓｕｅ,六棱野生大麦Ｈ．ｖｕｌｇａｒｅ Ｌ．ｓｓｐ．ａｇｒｉｏｃｒｉｔｈｏｎ（Ａｂｅｒｇ） Ｈｓｕｅ,六棱瓶形野生大麦Ｈ．ｖｕｌｇａｒｅ Ｌ．ｓｓｐ．ａｇｒｉｏｃｒｉｔｈｏｎ ｖａｒ．ｌａｇｕｎｃｕｌｉｆｏｒｍ（Ｂａｋｈｔ） Ｈｓｕｅ,栽培大麦Ｈ．ｖｕｌｇａｒｅ．Ｌ．进行了研究,将杂交结果进行观察与统计,并建立起５Ｓ ｒＲＮＡ基因定位的模式图。结果表明５Ｓ ｒＲＮＡ基因在染色体上的位点呈现动态变化,由二棱野生大麦、六棱瓶形野生大麦到六棱野生大麦、栽培大麦、位点数目有递增的趋势,而且位置也发生了某些改变。探讨了５Ｓ ｒＲＮＡ基因进化     

普通小麦三个基因组之间的遗传关系及原位杂交分析

以普通小麦（Ｔｒｉｔｉｃｕｍ ａｅｓｔｉｖｕｍＬ．）的３个可能的二倍体供体种（乌拉尔图小麦（Ｔ．ｕｒａｒｔｕＴｈｕｍ．）拟斯卑尔脱山羊草（ＡｅｇｉｌｏｐｓｓｐｅｌｔｏｉｄｅｓＴａｕｓｃｈ）和粗山羊草（Ａｅ．ｔａｕｓｃｈｉｉＣｏｓｓ．）的基因组ＤＮＡ为研究对象,通过它们之间的相互杂交,比较杂交强度以及泳道中带纹的不同,并结合部分ＤＮＡ重复序列在基因组间含量差异的数据,得出结论：Ａ＾ｕ和Ｄ基因组的关系     

中国桑寄生科植物资料(三)

作者在编著《ＦｌｏｒａｏｆＣｈｉｎａ》Ｌｏｒａｎｔｈａｃｅａｅ过程中,据近年采集的标本和花粉形态研究,修订了《中国植物志》第２４卷的桑寄生科。现报道钝果寄生属（Ｔａｘｉｌｕｓ）二个新分类单位：油杉钝果寄生Ｔ．ｒｅｎｉ,狭叶钝果寄生Ｔ．ｌｉｑｕｉｄａｍｂａｒｉｃｏｌｕｓｖａｒ．ｎｅｒｉｆｏｌｉｕｓ的描述和枫香钝果寄生Ｔ．ｌｉｑｕｉｄａｍｂａｒｉｃｏｌｕｓｖａｒ．ｌｉｑｕｉｄａｍｂａｒｉｃｏｌｕｓ及显脉钝果寄生Ｔ．ｃａｌｏｒｅａｓｖａｒ．ｆａｒｇｅｓｉ的地理分布区等;另有梨果寄生属（Ｓｃｕｒｒｕｌａ）一个新组合：藏南梨果寄生Ｓ．ｂｕｄｄｌｅｉｏｉｄｅｓｖａｒ．ｈｅｙｎｅｉ。     

吉林省产5种百合的核型研究

报道了吉林省产５种百合科植物的染色体数目和核型：①毛百合Ｌｉｌｉｕｍ ｄａｕｒｉｃｕｍ Ｋｅｒ．－Ｇｅｗ１．２ｎ＝２４＝２ｍ（２ＳＡＴ）＋２ｓｍ（２ＳＡＴ）＋８ｓｔ（２ＳＡＴ）＋１２ｔ（２ＳＡＴ）;②有斑百合Ｌ．ｃｏｎｃｏｌｏｒ Ｓａｌｉｓｂ．ｖａｒ．ｂｕｓｃｈｉａｎｕｍ（Ｌｏｄｄ．）Ｂａｋｅｒ ２ｎ＝２４＝２ｍ（２ＳＡＴ）＋４ｓｍ（４ＳＡＴ）＋６ｓｔ（２ＳＡＴ）＋１２ｔ;③兰州百合Ｌ．ｄａｖｉｄ     

中国兰科植物新资料

本文报道了２个新种（元阳石豆兰ＢｕｌｂｏｐｈｙｌｌｕｍｙｕａｎｙａｎｇｅｎｓｅＴｓｕｉ,长帽隔距兰ＣｌｅｉｓｏｓｔｏｍａｌｏｎｇｉｏｐｅｒｃｕｌａｔｕｍＴｓｉ）、２个新组合（翼萼卷瓣兰ＢｕｌｂｏｐｈｙｌｌｕｍｒｅｔｕｓｉｕｓｃｕｌｕｍＲｃｈｂ．ｆ．ｖａｒ．ｏｒｅｏｇｅｎｅｓ（Ｗ．Ｗ．Ｓｍｉｔｈ）Ｔｓｉ,角萼卷瓣兰Ｂ．ｒｅｔｕｓｉｕｓｃｕｌｕｍＲｃｈｂ．ｆ．ｖａｒ．ｔｉｇｒｉｄｕｍ（Ｈａｎｃｅ）Ｔｓｉ）和１个新命名（细茎毛兰ＥｒｉａｔｅｎｕｉｃａｕｌｉｓＳ．Ｃ．ＣｈｅｎｅｔＴｓｉ）。     

中国枝孢属的分类研究XXI.萝Mo枝孢新种和二新记录种

西方报道枝孢属一新种：罗Ｍｏ枝孢Ｃｌａｄｏｓｐｏｒｉｕｍ ｍｅｔａｐｌｅｘｉｓ Ｚ．Ｙ．Ｚｈａｎｇ ｅｔ Ｘ．Ｙ．Ｗａｎｇ．ｓｐ．ｎｏｖ．和二个新记录种：叶生枝孢槭变种Ｃ．ｅｐｉｐｈｙｌｌｕｍ （Ｐｅｒｓ．）Ｍａｒｔｉｎ ｖａｒ．ａｅｒｉｎｕｍ Ｓａｃｃａｒｄｏ和绳状枝孢Ｃ．ｆｕｎｉｃｕｌｏｓｕｍ Ｙａｎａｎｏｔｏ。新种附有拉丁文描述及形态图,模式标本保存于云南农业大学真菌标本室（ＭＨＹＡＵ）。     

利用AABBDDDD八倍体培育小麦一簇毛麦二体附加系的研究

对普通小麦（Ｔｒｉｔｉｃｕｍ ａｅｓｔｉｖｕｍ）－节节麦（Ａｅｇｉｌｏｐｓ ｓｑｕａｒｒｏｓａ）八倍体（２ｎ＝８ｘ＝５６,ＡＡＢＢＤＤＤＤ）与硬粒小麦（Ｔｒｉｔｉｃｕｍ ｄｕｒｕｍ）－簇毛麦９Ｈａｙｎａｌｄｉａ ｖｉｌｌｏｓａ）六倍体（２ｎ＝６ｘ＝４２,ＡＡＢＢＶＶ）杂交后,将所得七倍体杂种（ＡＡＢＢＤＤＶ）进行连续自交,在Ｆ４代中利用Ｃ－分带鉴定出可能的簇毛麦６Ｖ二体附加系９５－７和２Ｖ二体附加     

栽培烟草的核型研究

研究了２种栽培烟草（普通烟草Ｎｉｃｏｔｉａｎａ ｔａｂａｃｕｍ Ｌ．和黄花烟草Ｎ．ｒｕｓｔｉｃａ Ｌ．）的六大栽培类型１０个品种的核型。结果表明：所有供试材料均为双二倍体。黄花烟草的‘黄花烟’品种的核型公式为：２ｎ＝４ｘ＝４８＝４４ｍ（２ＳＡＴ）＋４ｓｍ。普通烟草９个品种的核型可简式为：‘白花铁杆’２ｎ＝４ｘ＝４８＝３４ｍ＋１０ｓｍ（２ＳＡＴ）＋４ｓｔ;‘柳叶尖’２ｎ＝４ｘ＝４８＝３４ｍ＋１０＋ｓ     

利用RFLP揭示普通小麦与野生二粒小麦间A和B组染色体的遗传分化

To investigate chromosome differentiation of genome A and B between common wheat and wild emmer wheat ( Triticum turgidum var. dicoccoides (Koern.) Bowden), the authors conducted a RFLP analysis of the two species using 153 genomic, cDNA and chromosome-specific probes. 75.8% of the probes had detected hybridization polymorphism in at least one of the five restriction enzymes. However, the polymorphic probes were unevenly distributed among different homoeologous groups, between different genomes and in different regions of a single chromosome. Homoeologous group 1 possessed the highest level of polymorphism (96.2%), followed by group 6 and 2 (84.6% and 82.1% respectively). In contrast, only 60%-67% of probes of the other four groups was polymorphic. In most groups the number of probes capable of detecting B chromosome polymorphism was slightly higher than that revealing A chromosome difference (totally 51.8% vs 43.1%). In a single chromosome, RFLP was predominant in the distal region (65.1%) and showed a decreasing trend from the proximal (46.2%) to the pericentric (42.4%) regions. The results suggest that there exists a substantial amount of DNA polymorphism between the A and B chromosomes of common wheat and those of wild emmer wheat, indicating that a considerable degree of genetic differentiation has taken place in the A and B genoms of two species during evolution from wild emmer to common wheat. The extent of the genetic differentiation may vary among different homoeologous groups, between A and B chromosomes and in different regions of individual chromosome.     

Physical location of homoeologous groups 5 and 6 molecular markers mapped in Triticum aestivum L

In situ hybridization was used to map 21 restriction fragment length polymorphism (RFLP) probes to linkage groups 5 and 6 of hexaploid wheat (Triticum aestivum L. em Thell.) in order to compare physical distances and genetic distances between adjacent markers. All 21 probes hybridized to the corresponding homoeologous chromosome arms. The linear order and linkage relationships among the DNA probes on the in situ-based physical maps were generally the same as those on the RFLP-based genetic maps. However, significant differences were observed between the centiMorgan distances on a linkage map and the physical distances of the probes using in situ-based techniques. The results indicated a clustering of polymorphic RFLP markers in the middle of all of the homoeologous group 5 and 6 chromosome arms. This suggests that the available linkage maps do not completely cover the physical length of the chromosomes. As with the genetic maps, the physical map clearly showed the presence of nonhomoeologous rearrangements in the terminal regions of chromosome arms 5AL and 6BS. However, the physical mapping gave an indication of the physical size of the rearrangements as well as their arm location.     

High-density mapping and comparative analysis of agronomically important traits on wheat chromosome 3A

Bread wheat chromosome 3A has been shown to contain genes/QTLs controlling grain yield and other agronomic traits. The objectives of this study were to generate high-density physical and genetic-linkage maps of wheat homoeologous group 3 chromosomes and reveal the physical locations of genes/QTLs controlling yield and its component traits, as well as agronomic traits, to obtain a precise estimate of recombination for the corresponding regions and to enrich the QTL-containing regions with markers. Physical mapping was accomplished by 179 DNA markers mostly representing expressed genes using 41 single-break deletion lines. Polymorphism survey of cultivars Cheyenne (CNN) and Wichita (WI), and a substitution line of CNN carrying chromosome 3A from WI [CNN(WI3A)], with 142 RFLP probes and 55 SSR markers revealed that the extent of polymorphism is different among various group 3 chromosomal regions as well as among the homoeologs. A genetic-linkage map for chromosome 3A was developed by mapping 17 QTLs for seven agronomic traits relative to 26 RFLP and 15 SSR chromosome 3A-specific markers on 95 single-chromosome recombinant inbred lines. Comparison of the physical maps with the 3A genetic-linkage map localized the QTLs to gene-containing regions and accounted for only about 36% of the chromosome. Two chromosomal regions containing 9 of the 17 QTLs encompassed less than 10% of chromosome 3A but accounted for almost all of the arm recombination. To identify rice chromosomal regions corresponding to the particular QTL-containing wheat regions, 650 physically mapped wheat group 3 sequences were compared with rice genomic sequences. At an E value of E < or = 10(-5), 82% of the wheat group 3 sequences identified rice homologs, of which 54% were on rice chromosome 1. The rice chromosome 1 region collinear with the two wheat regions that contained 9 QTLs was about 6.5 Mb.     

A cytomolecular approach to assess the potential of gene transfer from a crop (Triticum turgidum L.) to a wild relative (Aegilops geniculata Roth.)

When a crop hybridizes with a wild relative, the potential for stable transmission to the wild of any crop gene is directly related to the frequency of crop–wild homoeologous pairing for the chromosomal region where it is located within the crop genome. Pairing pattern at metaphase I (MI) has been examined in durum wheat × Aegilops geniculata interspecific hybrids (2n=4x=ABU^gM^g) by means of a genomic in-situ hybridization procedure that resulted in simultaneous discrimination of A, B and wild genomes. The level of MI pairing in the hybrids varied greatly depending on the crop genotype. However, their pattern of homoeologous association was very similar, with a frequency of wheat–wild association close to 60% in all genotype combinations. A–wild represented 80–85% of wheat–wild associations which supports that, on average, A genome sequences are much more likely to be transferred to this wild relative following interspecific hybridization and backcrossing. Combination of genomic DNA probes and the ribosomal pTa71 probe has allowed to determine the MI pairing behaviour of the major NOR-bearing chromosomes in these hybrids (1B, 6B, 1U^g and 5U^g), in addition to wheat chromosome 4A which could be identified with the sole use of genomic probes. The MI pairing pattern of the wild chromosome arms individually examined has confirmed a higher chance of gene escape from the wheat A genome. However, a wide variation regarding the amount of wheat–wild MI pairing among the specific wheat chromosome regions under analysis suggests that the study should be extended to other homoeologous groups.     

Restriction fragment length polymorphism (RFLP) analysis in wheat. II. Linkage maps of the RFLP sites in common wheat.

Sixty-six F2 plants from the cross, Triticum aestivum cv. Chinese Spring (abbrev. CS) x T. spelta var. duhamelianum (Spelta), exhibiting the greatest number of RFLPs among eight common wheats, were analyzed for their RFLP genotypes using genomic DNA clones of CS as probes. In total, 204 RFLP loci were identified and their linkage relationships established. By nulli-tetrasomic analyses, all linkage groups were assigned to one another of the 21 wheat chromosomes. In addition, the carrier chromosomes of 228 non-RFLP loci were identified. The linkage maps of these RFLP loci have a total size of 1800 cM and exceed those of the classical genes in both size and locus number. Twenty loci show distorted segregation, four of which are clustered on chromosome 4A and three on the 2D chromosome. The CS alleles on 4A exhibit preferential transmission, while those on 2D exhibit depressed transmission, compared with Spelta alleles. This suggests the influence of gametic factors in those regions. RFLP loci are much fewer in the D genome than in the A and B genomes, but the numbers of non-RFLP loci are nearly the same in these three genomes. This suggests that Spelta wheat originated from a hybridization between T. dicoccum (spelt emmer) and T. aestivum.     

Restriction fragment length polymorphism (RFLP) analysis in wheat. I. Genomic DNA library construction and RFLP analysis in common wheat

To develop detailed linkage maps of restriction fragment length polymorphism (RFLP) sites in wheat chromosomes, it was necessary to construct a genomic DNA library and to characterize the clones obtained. Forty-nine per cent of the clones were of single or low copy number per genome. With 91 clones of this class, as probes, and with two to four restriction endonucleases, for DNA digestion, RFLPs were examined among eight common wheats and a single emmer wheat. About 20% of the probes, and 13% of the probe-enzyme combinations revealed genetic polymorphism among the common wheats. DNA deletions account for most of the genetic differences among these wheat genomes. Based on the RFLP data, phylogenetic distances among the nine polyploid wheats were estimated, and a dendrogram showing the genetic relationships among them was constructed.     

A molecular linkage map of rye

A genetic map of six chromosomes of rye, (all of the rye chromosomes except for 2R), was constructed using 77 RFLP and 12 RAPD markers. The map was developed using an F₂ population of 54 plants from a cross between two inbred lines. A rye genomic library was constructed as a source of clones for RFLP mapping. Comparisons were made between the rye map and other rye and wheat maps by including additional probes previously mapped in those species. These comparisons allowed (1) chromosome arm orientation to the linkage groups to be given, (2) the corroboration of several evolutionary translocations between rye chromosomes and homoeologous chromosomes of wheat; (3) an increase in the number of available markers for target regions of rye that show colinearity with wheat. Inconsistencies in the location of markers between the wheat and rye maps were mostly detected by multi-copy probes.     

Detailed Comparative Mapping of Cereal Chromosome Regions Corresponding to the Ph1 Locus in Wheat

Detailed physical mapping of markers from rice chromosome 9, and from syntenous (at the genetic level) regions of other cereal genomes, has resulted in rice yeast artificial chromosome (YAC) contigs spanning parts of rice 9. This physical mapping, together with comparative genetic mapping, has demonstrated that synteny has been largely maintained between the genomes of several cereals at the level of contiged YACs. Markers located in one region of rice chromosome 9 encompassed by the YAC contigs have exhibited restriction fragment length polymorphism (RFLP) using deletion lines for the Ph1 locus. This has allowed demarcation of the region of rice chromosome 9 syntenous with the ph1b and ph1c deletions in wheat chromosome 5B. A group of probes located in wheat homoeologous group 5 and barley chromosome 5H, however, have synteny with rice chromosomes other than 9. This suggests that the usefulness of comparative trait analysis and of the rice genome as a tool to facilitate gene isolation will differ from one region to the next, and implies that the rice genome is more ancestral in structure than those of the Triticeae.     

A 2500-locus bin map of wheat homoeologous group 5 provides insights on gene distribution and colinearity with rice

We constructed high-density deletion bin maps of wheat chromosomes 5A, 5B, and 5D, including 2338 loci mapped with 1052 EST probes and 217 previously mapped loci (total 2555 loci). This information was combined to construct a consensus chromosome bin map of group 5 including 24 bins. A relatively higher number of loci were mapped on chromosome 5B (38%) compared to 5A (34%) and 5D (28%). Differences in the levels of polymorphism among the three chromosomes were partially responsible for these differences. A higher number of duplicated loci was found on chromosome 5B (42%). Three times more loci were mapped on the long arms than on the short arms, and a significantly higher number of probes, loci, and duplicated loci were mapped on the distal halves than on the proximal halves of the chromosome arms. Good overall colinearity was observed among the three homoeologous group 5 chromosomes, except for the previously known 5AL/4AL translocation and a putative small pericentric inversion in chromosome 5A. Statistically significant colinearity was observed between low-copy-number ESTs from wheat homoeologous group 5 and rice chromosomes 12 (88 ESTs), 9 (72 ESTs), and 3 (84 ESTs).     

Physical mapping of restriction fragment length polymorphism (RFLP) markers in homoeologous groups 1 and 3 chromosomes of wheat by in situ hybridization.

Using wheat ditelosomic lines and in situ hybridization of biotin-labelled DNA probes, 18 restriction fragment length polymorphism (RFLP) markers were physically located on homoeologous groups 1 and 3 chromosomes of wheat. Most of the markers hybridized to chromosome arms in a physical order concordant with the genetic maps. A majority of the markers studied were clustered in non-C-banded, distal euchromatic areas, indicating the presence of recombination hot spots and cold spots in those regions. However, on IBS the markers were well dispersed, which could be due to the abundance of heterochromatin throughout the arm. An inversion between Xpsr653 and Xpsr953 was observed on 1AL. One new Xpsr688 locus, approximately 20-26% from the centromere, was found on 1AS and 1BS. The physical location of Xpsr170 on group 3 chromosomes probably represents an alternative to the loci on the genetic map. Finally, Xpsr313 was mapped to two physical loci on IDL. Five markers were located to bins consistent with the deletion-based physical maps.