Follower fish of the goldspotted eel <Emphasis Type="Italic">Myrichthys ocellatus</Emphasis> with a review on anguilliform fish as nuclear species

In a nuclear-follower fish foraging association, the follower benefits from food uncovered or flushed out when the nuclear fish disturbs the bottom, while nuclear species generally do not seem to be benefiting. Among nuclear species, eels (anguilliform fish) are known to be one of the most represented groups. Here we investigated the frequency and time duration of foraging associations among the goldspotted eel Myrichthys ocellatus and reef fish in a subtropical marginal reef. In addition, we reviewed nuclear eel species and their followers described in the literature. From a total of 211 goldspotted eels observed, seven follower species were recorded in 19% of the samples. The average time of the following associations per species ranged from 40 to 190 s. Four species were reported for the first time as M. ocellatus followers (Bodianus rufus, B. pulchellus, Stephanolepis hispidus, and Serranus baldwini) and three of them have never been reported in the literature as eel followers (B. pulchellus, S. hispidus, and S. baldwini). The literature describes 13 eel species acting as nuclear for 66 fish species, represented mainly by groupers and sea basses. The size of the eel was not correlated with the size of its follower and neither with the number of described follower species. The nuclear role of eels is likely to be an important component of the trophic ecology of small and medium-sized macrocarnivore fish.     

Continued feeding on <Emphasis Type="Italic">Diporeia</Emphasis> by deepwater sculpin in Lake Huron

Monitoring changes in diets of fish is essential to understanding how food web dynamics respond to changes in native prey abundances. In the Great Lakes, Diporeia, a benthic macroinvertebrate and primary food of native benthivores, declined following the introduction of invasive Dreissena mussels and these changes were reflected in fish diets. We examined the diets of deepwater sculpin Myoxocephalus thompsonii collected in bottom trawls during 2010–2014 in the main basin of Lake Huron, and compared these results to an earlier diet study (2003–2005) to assess if their diets have continued to change after a prolonged period of Dreissena mussel invasion and declined Diporeia densities. Diporeia, Mysis, Bythotrephes, and Chironomidae were consumed regularly and other diet items included ostracods, copepods, sphaerid clams, and fish eggs. The prey-specific index of relative importance calculated for each prey group indicated that Mysis importance increased at shallow (≤55 m) and mid (64–73 m) depths, while Diporeia importance increased offshore (≥82 m). The average number of Diporeia consumed per fish increased by 10.0% and Mysis decreased by 7.5%, while the frequency of occurrence of Diporeia and Mysis remained comparable between time periods. The weight of adult deepwater sculpin (80 mm and 100 mm TL bins) increased between time periods; however, the change in weight was only significant for the 80 mm TL group (p?<?0.01). Given the historical importance of Diporeia in the Great Lakes, the examination of deepwater sculpin diets provides unique insight into the trophic dynamics of the benthic community in Lake Huron.     

Rare species of cyclostomata and fish in the Upper Oka basin and within Kaluga oblast

The species list of fish of the Upper Oka basin is verified. Data on biology of rare species are presented (western brook lamprey Lampetra planeri, sterlet Acipenser ruthenus, bystryanka Alburnoides bipunctatus rossicus, asp Aspius aspius, undermouth Chondrostoma variabile, bitterling Rhodeus sericeus, and fresh-water sculpin Cottus gobio koshewnikowi). Their morphological characters, distribution in the Upper Oka basin relative abundances of these species, and its changes during recent decades are also commented.     

Ubiquitous distribution of fluorescent protein in muscles of four species and two subspecies of eel (genus <Emphasis Type="Italic">Anguilla</Emphasis>)

In this study, the localization of fluorescent protein (FP) was characterized in the muscles of four species and two subspecies of eels Anguilla anguilla, A. australis, A. bicolor bicolor (b.), A. bicolor pacifica (p.) and A. mossambica in addition to the previously reported A. japonica. The open reading frame of each eel FP was 417 bp encoding 139 amino acid residues. The deduced amino acid sequences among the four species and two subspecies exhibited 91.4–100% identity, and belonged to the fatty-acid-binding protein (FABP) family. The gene structure of eel FPs in A. japonica, A. anguilla, A. australis, A. bicolor b., A. bicolor p. and A. mossambica have four exons and three introns, and were common to that of FABP family. The apo eel FPs expressed by Escherichia coli with recombinant eel FP genes were analysed for the fluorescent properties in the presence of bilirubin. The excitation and emission spectra of holo eel FPs had the maximum wavelengths of 490–496 and 527–530 nm, respectively. The holo eel FPs indicated that the fluorescent intensities were stronger in A. japonica and A. bicolor than in A. mossambica, A. australis and A. anguilla. The comparison of amino acid sequences revealed two common substitutions in A. mossambica, A. australis and A. anguilla with weak fluorescent intensity.     

Fish assemblage structure in an estuary of the Atlantic Forest biodiversity hotspot (southern Brazil)

We described the fish assemblage in the estuary of the Guaraguaçu River (one of the largest tributaries of the Paranaguá Bay Estuary, located within Brazil’s Atlantic Forest Biosphere Reserve) from June 2005 to May 2006, and assessed the seasonal and spatial effects of abiotic environmental attributes on the fish assemblage structure. Despite some oscillations in salinity, the upper and lower estuaries had year-round persistent oligohaline and polyhaline conditions, respectively. Despite high species richness (55 species), the Guaraguaçu River Estuary fish community contains a few dominant taxa; 11% of the richness accounts for >60% of its density and biomass. The most abundant species (in terms of both biomass and density) was Atherinella brasiliensis. Species whose densities were most strongly associated with the upper estuary were Centropomus parallelus, Ctenogobius schufeldti, Eucinostomus melanopterus, Platanichthys platana, Trinectes paulistanus, and Eugerres brasilianus. Those whose densities were most strongly associated with the lower estuary were A. brasiliensis, Sphoeroides greeleyi, Eucinostomus argenteus, Sphoeroides testudineus, Diapterus rhombeus, and Harengula clupeola. Throughout the year, canonical correspondence analysis identified: (1) the pattern of horizontal stratification of salinity along the river as being the most important variable for explaining most of the fish fauna structure; and (2) a strong relationship between the fish fauna and the salinity gradient along the estuary. Analysis of similarity further confirmed that each estuarine zone supports a year-round persistent and relatively homogeneous fish species assemblage. Total mean density and biomass remained constant over time in each estuarine habitat, but density shifted in the most abundant species, which appears related to recruitment patterns. Such species and abundance persistence likely occurs because seasonal rainfall-induced changes in river discharge are not sufficient to significantly shift runoff and salinity and thus fish assemblage structure (species composition, density and biomass) along the estuary. Such a lack of seasonal fish fauna movement as a response to changes in river flow contrasts with other estuarine systems around the world.     

Diversity of fish species in suichuan river and shushui river and conservation value,China

Based on the data collected from the Suichuan and Shushui Rivers, both tributaries of the Ganjiang River between April and July of 2015, the fish species identified were classified into 68 and 46 species, 14 and 12 families in the Suichuan River and Shushui River respectively. Cyprinidae is the most common family that accounts for 52.9% and 58.7% in the total number of fish species in the Suichuan River and Shushui River, respectively. The dominant species were Pseudohemiculter dispar, Squalidus argentatus, Silurus asotus and Leptobotia elongate for the Suichuan River and Squalidus argentatus, Acrossocheilus parallens, Pseudohemiculter dispar, Silurus asotus, Pelteobagrus fulvidraco, Acrossocheilus fasciatus and Zacco platypus for the Shushui River. The diversity of fish species showed more abundant and diverse for the Suichuan River. The composition of ecotype of fish indicated the rich diversities of ecotype in both the Suichuan and Shushui Rivers. The tributary (Suichuan River) and main stream of the Ganjiang River demonstrated a highly fauna similarity and the fish resources indicated its significance to maintain the fish diversity in the middle of the Ganjiang River and its benefits to the existence of the fish species in mountain streams. Dam construction, sand excavation and heavy metal pollution are the most significant threat to fish diversity and ecosystem functioning in Ganjiang River basin. In order to protect fish diversity and fisheries more effectively, relevant laws should be strengthened and conservation areas should be established for the survival of freshwater fish species.     

Seasonal feeding ecology of co-existing native and invasive benthic fish along a nearshore to offshore gradient in Lake Michigan

Relative abundance, diet composition and feeding strategy were determined for three benthic fish, the native deepwater sculpin Myoxocephalus thompsonii (Girard, 1851) and slimy sculpin Cottus cognatus (Richardson, 1836), and the invasive round goby Neogobius melanostomus (Pallas, 1814), along a nearshore to offshore gradient in southeastern Lake Michigan during March–December 2010, 2015, and 2016. Round goby were most abundant in the nearshore (<25 m), slimy sculpin were most abundant in the transitional zone (35–65 m), and deepwater sculpin were most abundant in the offshore zone (>75 m). Despite a large degree of spatial separation, some species did overlap, with slimy and deepwater sculpin occurring in sympatry throughout the year in the offshore and transitional zones, and round goby overlapping with both sculpin species seasonally in the transitional zone. Deepwater sculpin exhibited specialization on Mysis diluviana in all depth regions. Slimy sculpin in the offshore reduced diet overlap with deepwater sculpin by specializing on fish eggs during spring and fall, whereas in the transitional depth zone, there was considerable overlap between sculpin species due to the high importance of Mysis in diets. The invasive round goby had a mixed diet, with some diet overlap with native sculpin, especially slimy sculpin, in the transitional zone. In the nearshore zone, round goby displayed a generalized diet with many prey contributing to the diet, but the average contribution of any prey was generally low. Spatial separation and variable feeding strategies help reduce, but not eliminate shared resource use amongst these benthic fish in Lake Michigan.     

Dynamics of species composition of fish and some results of ichthyomonitoring in the middle course of the Oka (Ryazan oblast)

The dynamics of species composition of fish from the middle course of the Oka is considered. A total of 53 species of Cyclostomata and fish was previously recorded; however, only 43 species have been found at the present time. Due to different causes, ten species have disappeared, and ten new species have emerged. The species composition and structure of aboriginal fish population are characterized by relative stability; however, the total abundance of fish during the current decade, as compared to the 1970s, has considerably decreased. The sterlet Acipenser ruthenus, lake minnow Phoxinus precnurus, Volga zander Sander volgensis, and freshwater sculpin Cottus gobio belong to rare fish.     

Comparative Analysis of Content of Omega-3 Polyunsaturated Fatty Acids in Food and Muscle Tissue of Fish from Aquaculture and Natural Habitats

Two fish species reared in aquaculture (pink salmon Oncorhynchus gorbuscha and whitefish Coregonus lavaretus) and ten fish species from natural habitats (whitefish C. lavaretus, tugun Coregonus tugun, broad whitefish Coregonus nasus, least cisco Coregonus sardinella, vendace Coregonus albula, boganid charr Salvelinus boganidae, charr Salvelinus alpinus complex, northern pike Esox lucius, sharp-snouted lenok Brachymystax lenok, and taimen Hucho taimen) have been studied. The content of two long-chain polyunsaturated omega-3 fatty acids (PUFAs), eicosapentaenoic acid (20:5n-3, EPA) and docosahexaenoic acid (22:6n-3, DHA), in the muscle tissue of the fish and in their food (intestine contents) are compared. In the aquacultures of whitefish and pink salmon, the total content of EPA and DHA is significantly higher in feed than in the muscle tissue of the fish, which indicates losses of PUFA in the two-link food chain of the aquaculture during their transfer to the upper trophic level. EPA and DHA losses in aquaculture, which are confirmed by numerous literature data, mean an inefficient usage of the available sources of PUFAs and the aggravation of the global deficit of these biochemicals in the human diet. A study of natural fish populations reveals the accumulation of EPA and DHA in their biomass compared to food in many cases, although opposite phenomena are also observed. An assumption on the presence of an optimal, physiologically adequate species-specific level of PUFA in the fish muscle tissue has been made based on our data and literature data. If the level of PUFAs in the muscles is lower than optimal, their accumulation (bioaccumulation) from food and/or de novo synthesis are observed. When the optimal level is exceeded, the content of EPA and DHA in biomass approaches maximum species-specific values; however, part of these PUFAs entering from food is not digested or is catabolized. According to the obtained data, the species of the order Salmoniformes have an optimal level of 2 to 6 mg/g of wet weight. It has been found that in aquaculture approaching to maximum values of EPA + DHA content was accompanied by their losses (scattering) in the food chains, while in natural ecosystems the maximum values of PUFA content in the fish biomass are achieved by their accumulation from the lower trophic level. Boganid charr S. boganidae had the highest content of EPA + DHA in the muscle tissue among all known fish species (32.78 mg/g of wet weight).     

Interspecific differences of respiratory functions of some freshwater fish species

Hemoglobin affinity to oxygen, Bohr effect, sodium, potassium, and magnesium ion concentrations of erythrocytes in the three fish species from Rybinsk Reservoir (golden carp Carassius auratus gibelio, bream Abramis brama and pike Esox lucius) immediately after catching and during acclimation to laboratory conditions were studied. Our own and literature data on some other fish species were analyzed. The relationship between the functional features of the hemoglobin and ionic environment was found, and the changes taking place during acclimation and interspecific differences of these indices were shown.     

Locomotor synergies in fish

The kinematic characteristics {f(v), A(v), w(v)} allow a first-approximation representation of locomotor synergies in the swimming of fish: f is the frequency of the transverse oscillations, A is the amplitude of the caudal fin sweep, w is the velocity of the locomotor wave, and v is the locomotion speed. The additional compared characteristics included the step length L(v) and the wavelength λ(v), where L ≡ vT is the distance covered by the fish during the period T ≡ 1/f, and λ ≡ wT. These kinematic characteristics were derived from video recordings of swimming in six fish species. Three of the species investigated belonged to the anguilliform type, while the three others belonged to the carangiform type. The constant value of the wavelength λ at all speeds v was the common feature of the two types. The anguilliform fish performed a oneparameter version of locomotion control: the locomotion speed v changed due to the change of the wave velocity w and the undulatory amplitude remained constant. The carangioid fish used a two-parameter version of control, with changes in both the wave velocity w and the amplitude of undulations of the body and tail fin.     

Distribution and abundance of fish in the southwest of Caspian Sea coastal waters

This study was carried out in southwestern Caspian Sea coastal area to elucidate demersal bony fishes distribution and abundance. Twenty two species were found in shore line, which belong to 6 families. In deeper waters down to 7 meters only 5 species of Gobiidae and 1 species of Syngnathidae were identified. Two species Neogobius caspius and N. pallasi were the main components of demersal fishes; however in some regions Rutilus caspicus, Rutilus kutum and Liza spp. were dominated. Most places were dominantly occupied by Atherina boyeri, which had the highest abundance among the pelagic fishes. Conversely, the Ponticola gorlap, N. melanostomus and Proterorhinus nasalis showed the lowest abundances (less than 1 ind./100 m²). Benthophilus stellatus and P. nasali had the lowest niche overlaps with other species. Both of these two species and P. gorlap are suggested to be classified as endangered or vulnerable species based on their low abundance. The distribution of Syngnathus abaster depends on algae, while algae grow up into the stony construction of the coastal line. A negative insignificant correlation was observed between pelagic and demersal fish abundances. The commercial fisheries data of 76 beach seines in our study area during 2002–2013 was compared with our results on fish abundance and species composition. More than 93% of total fish catch constituted Liza spp. and Rutilus kutum. The relationship between the abundance and distribution of the studied species, and the restocking activities performed by Iranian fisheries organization are discussed. The high abundance and distribution of small size fish in tidal zone could be related to the distribution of crustacean, which provide a good source of food for these fish species.     

Findings of new and rare fish species in the coastal zone of the Crimea (the Black Sea)

Characteristics of seven Atlantic-Mediterranean fish species are provided. Of them, four (gobies—yellow-headed Gobius xanthocephalus and red-mouthed G. cruentatus, incognito blenny Parablennius incognitus, and greater pipefish Syngnathus acus) were either first found in the Black Sea coastal zone of the Crimea, or their findings were doubted, and three species (thin-lipped grey mullet Liza ramada, European barracuda Sphyraena sphyraena, and Black Sea salmon Salmo trutta labrax) are very rare. Over the last decade, the authors recorded 15 fish species; of them, seven Atlantic-Mediterranean species have dispersed along the Crimean coasts by now, one endemic of the far eastern seas (chameleon goby Tridentiger trigonocephalus) has naturalized in Sevastopol Bay, four invading species, freshwater by origin, permanently occur in the estuary zones of the peninsula; the remaining three species are known from single findings and apparently belong to the category of accidental fish. An increase in the species composition of ichthyofauna off the Black Sea coasts of the Crimea results from the on-going process of mediterranization—the invasion in the estuary of freshwater tolerant species at the expense of accidental species that penetrated here either independently or with ballast waters.     

Feeding of pelagic fish in waters of Mauritania: 2. Representatives of Families Carangidae,Scombridae, Pomatomidae,and Trichiuridae

Feeding peculiarities of mass pelagic ichtyophagous fish from the Canary upwelling waters and frontal zones of Mauritania have been investigated: vadigo Campogramma glaycos, false scad Caranx rhonchus, bluefish Pomatomus saltatrix, Atlantic bonito Sarda sarda, West African Spanish mackerel Scomberomorus tritor, large-eyed hairtail Trichiurus lepturus and pompano Trachinotus ovatus. These species feed on epipelagic fish living or forming temporary agglomerations at the depths up to 200–250 m from the surface.     

Comparative analysis of otolith morphology in three species of <Emphasis Type="Italic">Scomber</Emphasis>

Geometric morphometrics is a quick and reliable approach to differentiate fish stocks based on the variation of otolith shapes. In this study, morphometric analysis of otolith shapes was used to differentiate three species of Scomber. The sagittae morphology of S. scombrus otolith is totally different from that of S. japonicus and S. australasicus. Multivariate analysis consistently showed that S. japonicus was morphologically similar to S. australasicus, whereas a significant difference in otolith shapes was detected between S. scombrus and other two species of Scomber. The rostrum, antirostrum, excisural notch and dorsal-posterior margin of the otolith reflect the main variations between the three species of Scomber. Shape indices and Fourier coefficients were used to discriminate fish species using analysis of variance and Fisher discriminant analysis. The shape indices successfully differentiated 100%, 95.7% and 96.4% of otoliths in S. japonicus, S. australasicus and S. scombrus, respectively, while the Fourier coefficients only discriminated 70.0%, 61.9% and 91.3% of the sagittae in S. japonicus, S. australasicus and S. scombrus. This study indicates that the shape analysis on the sagittae morphometrics of otoliths is a better method to differentiate species of Scomber.     

Authentication of five <Emphasis Type="Italic">Barilius</Emphasis> species from Indian waters using DNA barcoding

Authentic identification of fish species is essential for conserving them as a valuable genetic resource in our environment. DNA barcoding of living beings has become an important and ultimate tool for establishing their molecular identity. Among cyprinids, Barilius is an important genus having nearly 23 species in Indian region whose morphological identification is often difficult due to minute differences in their features. Five species collected from Indian waters and primarily identified as Opsarius bakeri (syn. Barilius bakeri), B. gatensis, B. vagra, B. bendelisis and B. ngawa were authenticated by their DNA barcoding based on mitochondrial COI gene sequences. Five individuals of each species were taken for barcode preparation by COI gene sequencing which yielded one barcode for B. ngawa, two barcodes each for O. bakeri, B. gatensis, B. bendelisis and three barcodes for B. vagra. The order of inter and intra-specific variation was estimated to know a preliminary status of variation prevailing in these cold stream fish species significant for evolution and conservation of these valued species of our ichthyofauna. Average variation within genera was found to be 13.6% with intra-specific variation ranging from 0.0% (B. ngawa) to 0.6% (B. gatensis). These distance data are in the same order found by various researchers globally using COI barcode sequences in different fish species. Phylogenetic relatedness among Barilius species and some other cyprinids validate their status of individual species as established by conventional taxonomy.     

Seasonal and interannual variation of ichthyoplankton off Mauritania

Changes of the quantitative and qualitative composition of ichthyoplankton off Mauritania (21–16° N) in different seasons of 1997–2008 are analyzed. In this area, pelagic eggs and larvae of over 120 fish species belonging to 71 families are recorded. In warm periods, the fish of the tropical fauna intensively spawn off Mauritania; round sardinella Sardinella aurita, West-African horse mackerel Trachurus trecae, and jack mackerel Caranx rhonchus are dominant. In cold periods, active spawning of fish belonging to the tropical fauna is recorded, the most abundant are European pilchard Sardina pilchardus, European horse mackerel Trachurus trachurus, and Atlantic mackerel Scomber japonicus. The spawning biomass of principal commercial fish species is calculated on the basis of the quantity of eggs laid by females. Environmental factors control fluctuations of abundance and distribution of ichthyoplankton in the considered region.     

Genotypic characterization of Lactic acid bacteria in gut microbiome of freshwater fish

The present study focused on identification and genotypic characterization of Lactic acid bacteria (LAB) in the intestine of freshwater fish. 76 strains of LAB were isolated and identified by 16S rRNA gene sequences and hsp60 gene sequences as different strains of Lactobacillus plantarum, Lactobacillus pentosus, Lactobacillus fermentum, Lactobacillus delbrueckii subsp. bulgaricus, Lactobacillus brevis, Lactobacillus reuteri, Lactobacillus salivarius, Pediococcus pentosaceus, Pediococcus acidilactici, Weissella paramesenteroides, Weissella cibaria, Enterococcus faecium, and Enterococcus durans. The hsp60 gene showed a higher level of sequence variation among the isolates examined, with lower interspecies sequence similarity providing more resolutions at the species level than the 16S rRNA gene. Phylogenetic tree derived from hsp60 gene sequences with higher bootstrap values at the nodal branches was more consistent as compared to phylogenetic tree constructed from 16S rRNA gene sequences. Closely related species L. plantarum and L. pentosus as well as species L. delbrueckii subsp. bulgaricus and L. fermentum were segregated in different cluster in hsp60 phylogenetic tree whereas such a distribution was not apparent in 16S rRNA phylogenetic tree. In silico restriction analysis revealed a high level of polymorphism within hsp60 gene sequences. Restriction pattern with enzymes AgsI and MseI in hsp60 gene sequences allowed differentiation of all the species including closely related species L. plantarum and L. pentosus, E. faecium and E. durans. In general, hsp60 gene with higher evolutionary divergence proved to be a better phylogenetic marker for the group LAB.     

First data on the age,growth processes,and otoliths of snub-nosed spiny eel <Emphasis Type="Italic">Notacanthus chemnitzii</Emphasis> (Notacanthidae)

This is the first work on the age, developmental stages, and otoliths of snub-nosed spiny eel Notacanthus chemnitzii (Notacanthidae), a rare fish species inhabiting the waters of southwestern Greenland. The mean age of 14 studied fishes (with a length of 36–104 cm and a mass of 74–3834 g) varied in the range from 11 to 26 years. Since the duration of leptocephalus stage is unknown, the real age can be greater. The length of snub-nosed spiny eel can reach 122 cm; thus, its maximal age can be more than 30 years. The minimal length of mature females was 55 cm (18 years); the minimal length of mature males was 66 cm (14 years).     

Gutsy genetics: identification of digested piscine prey items in the stomach contents of sympatric native and introduced warmwater catfishes via DNA barcoding

A major focus of ecology is understanding trophic relationships and energy flows in natural systems, associated food web dynamics and changes in food webs due to introduced species. Predator-prey interactions are often assessed by examining stomach contents. However, partially digested remains may be difficult to accurately identify by traditional visual analysis. Here we evaluate the effectiveness of DNA barcoding to identify digested piscine prey remains in invasive Blue Catfish Ictalurus furcatus, non-native, but established Channel Catfish Ictalurus punctatus and native White Catfish Ameiurus catus from Chesapeake Bay, USA. Stomach contents were examined and piscine prey items were scored as lightly digested, moderately digested or severely digested. A 652 base pair region of the cytochrome c oxidase subunit I (COI-5P) mitochondrial DNA gene was sequenced for each prey item. Edited barcode sequences were compared to locally-caught and validated reference sequences in BOLD (Barcode of Life Database). A large majority of prey items were sufficiently digested to limit morphological identification (9.4 % to species and an additional 12.1 % to family). However, overall barcoding success was high (90.3 %) with little difference among the digestion classifications. Combining morphological and genetic identifications, we classified 91.6 % of fish prey items to species. Twenty-three fish species were identified, including species undergoing active restoration efforts (e.g., Alosa spp.) and commercially important species, e.g., Striped Bass Morone saxatilis, White Perch Morone americana, American Eel Anguilla rostrata and Menhaden Brevoortia tyrannus. We found DNA barcoding highly successful at identifying all but the most heavily degraded prey items and to be an efficient and effective method for obtaining diet information to strengthen the resolution of trophic analyses including diet comparisons among sympatric native and non-native predators.