COMPONENTS OF THE ELECTRON-TRANSFERRING SYSTEM IN ACETOBACTER SUBOXYDANS AND RECONSTRUCTION OF THE LACTATE OXIDATION SYSTEM

1. Cytochromes a₁⁵⁹⁰, b⁵⁶⁰, c₁⁵⁵⁴ and c₁⁵⁵² were isolated andpurifiedfrom a strain of Acetobacter suboxydans. The proceduresusedwere described in detail.
2. The main cytochrome band at550-560 mµ in intact cellssplitted at liquid air temperatureinto two bands, 551 mµ(strong) and 559 mµ (weak).
3. Optical and physiological properties of the four cytochromeswere investigated. Lactic dehydrogenase activity was found tobe associated with cytochrome c₁⁵⁵⁴. The two c₁-type cytochromes,especially cytochrome c₁⁵⁵⁴, persisted in their reduced formafter the purification through many steps.
4. By some combinationsof isolated components reconstruction ofthe oxygen uptake systemcould be realized.
5. The oxygen-consuming activity of purifiedoxidase preparationswas accelerated by a-tocopherol but notby Emasoll 4130 andTween 80.
6. Some discussions were made onthe nature of terminal oxidase,the role of cytochrome c₁⁵⁵²in the electron-transport system,and persistence of reducedstate of c₁-type cytochromes.
7. A possible scheme of the electron-transferringsystem of Acetobactersuboxydans was presented.

(Received May 16, 1960; )     

Cytochromes of Mitochondria from Rice Seedlings Germinated under Water and Their Changes during Air Adaptation

Rice seeds were germinated for up to 5 days under water (submerged)and some for another day in air (air-adapted). Control seedswere germinated for 6 days throughout in air. Low-temperaturedifference spectra of shoot mitochondria were compared amongthese three types of seedlings. All cytochromes found in theaerobic seedlings were present in the submerged seedlings. However,there were some differences in the cytochromes b₅₅₃ and c ofthese two types of seedlings. The cytochrome aa₃ peak heightand cytochrome oxidase activity per mitochondrial protein increased1.6- and 2.8-fold, respectively, during air adaptation. Slightlyhigher concentrations of the b-type cytochromes than found inair-adapted mitochondria were already present in submerged mitochondria.The computed difference between the dithionite-reduced differencespectra of mitochondria from submerged seedlings before andafter air adaptation, showed that cytochromes aa₃ and c hadincreased more than cytochrome b₅₅₇ during air adaptation. (Received November 16, 1987; Accepted March 16, 1988)     

Isolation and Purification of a Ubiquinone-Cytochrome b-c1 Complex from a Photosynthetic Bacterium, Rhodopseudomonas sphaeroides

A ubiquinone-cytochrome b-c₁ complex was removed from chromatophoremembranes of a Rhodopseudomonas sphaeroides green mutant bydeoxycholate-cholate treatment of the chromatophores. The complexwas purified by ammonium sulfate fractionation and gel filtration. The molecular weight of the purified complex was 240,000 (240kD) and it was composed of seven subunits with molecular weightsof 47 kD, 42 kD, 38 kD, 32 kD, 30 kD, 24 kD and 16 kD. The complexcontained 1.54 and 3.42 nmol of cytochrome c₁ and two differentcytochrome b species per mg protein, respectively. It also contained7.07 nmol of ubiquinone, 6.37 nmol of non-heme iron and about3 nmol of carotenoids per mg protein. No flavins were detected.Heme staining indicated that the 32 kD-and 24 kD-subunits werecytochromes. The midpoint potential of cytochrome c₁ was 245 mV, and thevalues for the cytochromes b were 60 mV and –75 mV atpH 7.2. The peak of the -band of the reduced-minus-oxidizeddifference spectrum of cytochrome c₁ was located at 552.5 nm,arid peaks of the b-type cytochromes with higher and lower midpointpotentials were located at 562 nm and 563 nm. The chemical and the subunit compositions of the purified complexreported here were similar to those obtained for the inner membranesof mitochondria of various organisms. (Received April 5, 1982; Accepted June 14, 1982)     

Cytochromes in the Cultured Mycobiont of a Lichen, Cladonia vulcani Sav

Cytochromes in a cultured cells of the mycobiont of Cladoniavulcani Sav. were studied, b-and c-type cytochromes and aa₃-typecytochrome c oxidase were found in the membrane fraction, whileb- and c-type cytochromes were found in the soluble fraction.Soluble cytochrome c-549.5 was purified, and some of its molecularproperties were determined. (Received June 27, 1994; Accepted October 3, 1994)     

Chromatic Regulation of Cytochrome Composition and Electron Transfer from Cytochrome b6-f Complex to Photosystem I in Anacystis nidulans (Tx 20)

Cytochrome composition of the cyanobacterial photosyntheticsystem was studied with Anacystis nidulans (Tx 20) in relationto the chromatic regulation of photosystem composition. Comparisonof cytochrome compositions in cells with a high PS I/II ratio(3.0, grown under weak orange light) and with a low ratio (1.6,grown under weak red light) indicated that cytochrome compositionwas also changed in the chromatic regulation of photosystemcomposition. Two types of cytochrome change were observed: 1)contents of cytochromes C₅₅₃ and c₅₄₈ were changed in parallelwith the changes in PS I content, and 2) cytochrome b₅₅₃ andcytochrome b₆-f complex were held at a constant molar ratioto PS II. The molar ratio, PS II : cytochrome b₅₅₉ : cytochromeb₆-f complex : cytochrome c₅₅₃ : PS I : cytochrome C₅₄₈, inthe red-grown cells was 1 : 2.5 : 1.3 : 0.17 : 1.6 : 0.67, andthe ratio in the orange-grown cells, 1:2.4:0.9:0.32:3.0:1.2.In both types of cells, almost all cytochrome f in the cytochromeb₆-f complex was rapidly oxidized after multiple flash activation,indicating that all cytochrome b₆-f complexes in cells of bothtypes are functionally connected to PS I, even when the molarratio to PS I is largely changed. The content of cytochromeC₅₅₃ was at most 0.14 of PS I, suggesting that the cytochrometurns over several times per one turnover of PS I. ¹Present address: Department of Biology, Faculty of Science,Tokyo Metropolitan University, Fukazawa 2-1-1, Setagaya, Tokyo158, Japan. (Received January 20, 1986; Accepted March 17, 1986)     

Contents of Cytochromes, Quinones and Reaction Centers of Photosystems I and II in a Cyanobacterium Synechococcus sp.

The contents of photosystem I and photosystem II reaction centers,cytochrome c-553, cytochrome c-550, cytochrome f, cytochromeb-559, cytochrome b-563, plastoquinone and vitamin K₁ in thecyanobacterium Synechococcus sp. were determined. About threephotosystem I reaction centers were present for each photosystemII reaction center. The amounts of cytochromes functioning betweenthe two photosystems were approximately half those of the photosystemI reaction center. Plastocyanin was not detected, while plastoquinoneand vitamin K₁ were present in excess of other electron carriersand reaction centers. The results indicate the importance ofplastoquinone and cytochrome c-553 for cooperation of the tworeaction centers through electron transport. ¹Present address: Toray Basic Research Laboratory, 1111 Tebiro,Kamakura, Kanagawa 248, Japan. (Received June 17, 1982; Accepted January 17, 1983)     

Properties of the Cytochrome c Oxidase Activity of Cytochrome b561 from Photoanaerobically Grown Rhodopseudomonas sphaeroides

Cytochrome b₅₆₁ from Rhodopseudomonas sphaeroides had cytochromec (c2) oxidase activity and a pH optimum at 6.0 for this activity.The activity was affected by the ionic strength of the reactionmixture. The apparent K_m and maximal velocity (V_max) valuesin the absence of addea salts were 14 µM and 120 nmoloxidized per min per mg protein for horse heart cytochrome c.Reduced horse heart cytochrome c was reoxidized in first-orderkinetics by this cytochrome b₅₆₁. The specific activity was0.7 s^–1 per mg protein at 20°C at the concentrationof 30 µMM cytochrome c. Activity was inhibited by KCN and NaN₃, but not by antimycin.The addition of a low concentration of KCN to the cytochromeb₅₆₁ produced a change in the absorption spectrum, evidencethat KCN interacts with the heme moiety of cytochrome b₅₆₁.Results of this and preceeding studies show that the cytochromeoxidase (cytochrome "o") described earlier (Sasaki et al. 1970)is cytochrome b₅₆₁. (Received May 16, 1983; Accepted September 8, 1983)     

Electron Transport Coupled to Nitrate Reduction in a Photodenitrifier, Rhodopseudomonas sphaeroides forma sp. denitrificans

The electron transport system involved in nitrate reductionand its relationship to photosynthetic cyclic electron transportin a photodenitrifier, Rhodopseudomonas sphaeroides forma sp.denitrificans, were studied. Nitrate oxidized only b-type cytochromein the presence of cyanide, which inhibits nitrite reductase.Heptylhydroxyquinoline-N-oxide (HOQNO) inhibited the oxidationof b-type cytochrome by nitrate, but not the oxidation of b-and c-type cytochrome by nitrite. The inhibition by HOQNO wasovercome by phenazine methosulfate (PMS). Absorption changesof b-type cytochrome induced by illumination were in just theopposite directions for oxygen- and nitrate-oxidized cells;the cytochrome was reduced in oxygen-oxidized cells and oxidizedin nitrate-oxidized cells. Antimycin enhanced the reductionand inhibited the oxidation, but had no inhibitory effect onthe oxidation of b-type cytochrome by nitrate. Dithionite-reducedminus ferricyanide-oxidized difference spectra of cells at 77?Kshowed two b-type cytochrome components with a bands at 556.5and 562 nm. The proportion of the b-562 component decreasedin cells grown under denitrifying conditions. It was concludedthat a b-type cytochrome is involved in the nitrate reduction.The b-type cytochrome was presumed to be an alternative to thecytochrome b in the photosynthetic cyclic electron transport. ¹ Present address: Japanese Red Cross Tokyo-to Komagome BloodCenter, Komagome 2-2-2, Toshima-ku, Tokyo 170, Japan. (Received August 13, 1981; Accepted December 5, 1981)     

Inhibition of Respiration in Prototheca zopfii by Light

Irradiation of cells of Prototheca zopfii with blue light inhibited the respiratory capacity of the cells. The inhibition of respiration was correlated with a photodestruction of cytochrome c(551), cytochrome b(559), and cytochrome a₃. Cytochrome c(549), cytochrome b(555), and cytochrome b(564) were unaffected by the irradiation treatment. The α-band of reduced cytochrome a was shifted from 599 to 603 nm by irradiation, an effect similar to that observed when methanol was added to nonirradiated cells. The presence of oxygen was required during irradiation for both photoinhibition of respiration and photodestruction of the cytochromes. Cytochrome a₃ was protected against photodestruction by cyanide. Photodestruction of these same cytochromes also occurred when washed mitochondria of P. zopfii were irradiated.     

Comparison between Electron Transfers through Plastocyanin in Spinach Chloroplasts and Cytocbrome C2 in Rhodopseudomonas sphaeroides

Photosynthetic electron transfers through the water-solubleperipheral membrane proteins of plastocyanin and cytochromec₂, were studied in spinach chloroplasts and the photosyntheticbacterium Rhodopseudomonas sphaeroides. In spinach chloroplasts,the rate of flash-induced oxidation of cytochrome f was highlydependent on the salt concentration in the suspending medium.The maximum rate with a half time of 200 µs was observedin the presence of 50 mas KCl or 5 mM MgCl₂. The salt effectwas similar to that on the reaction rate between P700 in thylakoidfragments and externally added plastocyanin. On the other hand,in intact cells of R. sphaeroides, in which cytochrome c₂ islocated in the periplasmic space exposed to the outer ionicenvironment, the rate of cytochrome c₁ oxidation via cytochromec₂ was almost independent of salt concentration. This independencewas a contrast to the strong dependence on salt concentrationof reactions between isolated reaction centers and cytochromec₂ These results suggest that plastocyanin reacts collisionallywith the photosystem I reaction center and cytochrome b₆f complexin a manner that is controlled by the surface electrostaticpotential. Cytochrome c₂, on the other hand, reacts with thebacterial reaction center and cytochrome bc₁ complex probablyby forming a complex prior to activation of the reaction center. ¹ Present address: Department of Biology, Faculty of Science,Tokyo Metropolitan University, Fukazawa 2-1-1, Setagaya, Tokyo158, Japan.     

Oxidation-reduction potentials of respiratory chain components in ThiobacillusA2

(1) Cells of ThiobacillusA₂ grown chemoautotrophically on thiosulfate or heterotrophically on succinate with oxygen contained b-, c-, o-, a- and a₃-type cytochromes. The amount of cytochrome per mg of cell protein was much greater in thiosulfate-grown cells and differences in the relative concentrations of cytochromes were observed for the different growth conditions. (2) The half-reduction potentials at pH 7.0 (E_m,7.0) and spectral maxima of c-, b-, a- and a₃-type cytochromes were similar in cells grown aerobically with thiosulfate or with succinate as the growth substrate. (3) The half-reduction potential of the ‘invisible’, or high-potential copper, as determined from the potentiometric behavior of the carbon monoxide-reduced cytochrome a₃ complex at pH 8.0, was 365 mV. (4) Reducing equivalents from thiosulfate appear to enter the respiratory chain at the cytochrome c level; however, studies in cell-free extracts were limited due to a loss in respiratory activity with thiosulfate as a substrate upon cell disruption.     

The Cytochromes of Prototheca zopfii

The respiratory pigments of Prototheca zopfii include seven cytochromes: two c-type cytochromes, a soluble c(549) and a membrane bound c(551); three b-type cytochromes, b(555), b(559) and b(564); and cytochromes a and a₃. Cytochromes a and a₃ could be resolved spectrally in the α-band region by reducing the cells in the presence of methanol and cyanide. Methanol shifted the absorption maximum of cytochrome a from 598 to 603 nanometers and permitted dithionite (or substrate) to reduce the cyanide-cytochrome a₃ complex to give a well defined 595-nanometer absorption band. Methanol did not interfere with CO binding by cytochrome a₃, and CO did not alter the methanol effect on cytochrome a. Azide and cyanide, which partially inhibited exogenous respiration, stimulated endogenous respiration. Frozen steady states of the electron transport chain in the presence of cyanide and azide indicated that the stimulation by these inhibitors was due to an increased autooxidation of one of the b-type cytochromes, possibly b(564).     

Auxin-induced heritable variants in yeast with special reference to physiological and genetic characters

A high concentration (400 mg/l) of an auxin, -naphthaleneaceticacid produced heritable variants differing in cell form andsize and in sporulation ability in a diploid strain of Saccharomycescerevisiae. These variants showed altered absorption spectrain the region of cytochromes a + a₃, b and/or c, but could growin a glycerol medium. Cultures of dissected spores from thesevariants involved many non-maters. These variants showed irregularsegregation of nutritional markers and/or a high DNA contentper cell. Since most of the variants grow more slowly on anauxin medium than does the original strain, they seem to beproduced by the induction by auxin rather than by selectiveenrichment. Genetic control of the ability to respond to auxinand the biological significance of auxin-induced variation inyeast is discussed. (Received January 12, 1968; )     

Effects of growth conditions on formation of cytochrome system of a denitrifying bacterium, Pseudomonas stutzeri

Cytochrome systems in cells of a denitrifying bacterium, Pseudomonasstutzeri (VAN NIEL strain), grown under different atmosphericconditions were compared with reference to the effects of nitrateand nitrite on cytochrome synthesis. When a culture was sufficiently aerated (aerobic conditions),synthesis of all cytochrome components was repressed, regardlessof the presence or absence of nitrate and nitrite. When aeratedmoderately (semi-aerobic conditions), both soluble and paniculatecytochromes c-552 and cytochrome b-558 contents markedly increasedeven in the absence of nitrate and nitrite. Under anaerobic or semi-aerobic conditions, nitrite inducedcytochrome a₂–c synthesis. This inductive effect of nitritewas counteracted by nitrate. Nitrate also repressed particulatecytochrome c-552 synthesis to some extent but nitrite did not. ¹Present address: Department of Biochemistry, Hiroshima UniversitySchool of Dentistry, Hiroshima, Japan (Received June 24, 1969; )     

ELECTRON TRANSPORT SYSTEMS OF RHIZOBIUM GROWN IN NODULES AND IN LABORATORY MEDIUM

The electon transport systems of Rhizobium japonicum were studied,comparing cells harvested from effective nodules with thosefrom artificial culture. Participation of the cytochrome systemwas confirmed in both forms of cells. Absorption peaks of thecytochromes of cultured cells were a, b, c type, resemblingthose of Bacillus subtilis, yeast and mammalian tissue. Cytochromea could not be detected in the absorption spectrum of symbioticcells, although the CO binding difference spectrum showed apeak at about 438 mµ, which can be attributed to a componenta₃ or a₁. CO difference spectrum also showed a shoulder at about416 mµ. Cells cultivated under the insufficient supply of oxygen showedthe cytochrome absorption spectrum closely resembled that ofsymbiotic cells. Diaphorase activity was lower in symbioticcells. These results are considered to be due to the insufficientsupply of oxygen within nodule tissue. Succinate oxidation bythe symbiotic cell paniculate was shown to be carbon monooxideresistant. NADH₂ oxidation by the supernatant fraction of symbioticcells was accelerated by flavin mononucleotide, 2, 6-dichiorophenolindophenol, methylene blue and vitamin K₃. ¹Present address: Faculty of Agriculture, Tôhoku University,Sendai. ²Present address: Central Agricultural Experiment Station, Kitamoto.     

Preparation of a Photoactive Reaction Center Complex Containing Photo-reducible Fe-S Centers and Photooxidizable Cytochrome c from the Green Sulfur Bacterium Chlorobium tepidum

A photoactive reaction center (RC) complex was isolated fromthe green sulfur bacterium Chlorobium tepidum by solubilizationof membranes with Triton X-100, followed by sucrosedensity gradientcentrifugation, DEAE Bio-Gel A chromatography, and hydroxyapatitechromatography. The purified RC complex contained about 50–70bacteriochlorophyll molecules (BChl) per P840, as assayed byphotooxidafion. It showed a near-infrared BChl a absorptionpeak at 814 nm and shoulders at about 800 and 835 nm at roomtemperature. SDS-PAGE analysis revealed 6 polypeptides withapparent molecular masses of 100, 65, 41, 32, 23, and 18 kDa.The RC complex binds functional P840 and Cyt c₅₅₁, which werephotooxidized by continuous illumination at room temperature.Upon flash excitation, the bound Cyt c₅₅₁ was oxidized, andrereduced in the dark with a half-time of 16 and 400 ms in thepresence and absence of 0.1 mM 2,6-dichlorophenol indophenol,respectively, at room temperature. At 551 nm, the amount ofthe Cyt c photooxidized by continuous illumination was 60% ofthe amount determined by chemical oxidation-reduction. The functionalCyt c₅₅₁/P840 ratio was calculated to be 1.2–1.7. EPRspectroscopy at cryogenic temperatures revealed that the RCcomplex binds three photoreducible Fe-S centers designated tobe CF_A, CF_B and CF_X (C for Chlorobium). CF_A and CF_B were reducedin the dark with dithionite at pH 10. (Received May 26, 1993; Accepted October 4, 1993)     

Purification and Some Properties of Soluble Cytochromes, Cytochrome c-551 and Cytochrome c-550, from a Facultative Methylotroph, Protaminobacter ruber strain NR-1

Two soluble cytochromes of the C-type, cytochrome c-551 andcytochrome c-550, were purified from the bacteriochlorophyll-containingcells of a facultative methylotroph, Protaminobacter ruber StrainNR-1, by ion-exchange chromatography and gel-filtration. Cytochrome c-551 had absorption maxima at 551, 522 and 416 nmin the reduced form, and at 525, 410 and 273 nm in the oxidizedform. This cytochrome was a slightly basic protein with an isoelectricpoint of 8.4. It had a mid-point redox potential of 272 mV atpH 7.0. The molecular weight of this protein was 13,500 and13,700 by sodium dodecylsulfate polyacrylamide gel electrophoresis(SDS-PAGE) and gel-filtration, respectively. Cytochrome c-550 had absorption maxima at 550, 522 and 415 nmin the reduced form, and at 527, 409 and 278 nm in the oxidizedform. This cytochrome was acidic, having an isoelectric pointof 4.3. It had a mid-point redox potential of 227 mV at pH 7.0.Its molecular weight was 19,500 and 22,000 by SDS-PAGE and gel-filtration,respectively. (Received August 4, 1984; Accepted October 22, 1984)     

Isolation of the Photoactive Reaction Center Complex that Contains Three Types of Fe-S Centers and a Cytochrome c Subunit from the Green Sulfur Bacterium Chlorobium limicola f. thiosulfatophilum, Strain Larsen

The photoactive reaction center (RC) complex from the greensulfur bacterium Chlorobium limicola f. thiosulfatophilum, strainLarsen, was isolated after solubilization and ammonium sulfatefractionation followed by ion-exchange chromatography. The spectrumof the complex was almost identical with that of the similarRC complex isolated by Feiler et al. [(1992) Biochemistry 31:2608–2614] except for the presence of cytochrome c₅₅₁instead of c₅₅₃ in the latter study. A molecular ratio of BChla to P840 of the isolated RC complex was assayed to be 25–35.SDSPAGE analysis revealed that the isolated complex containedthree major polypeptides with apparent molecular masses of 68,41 and 21 kDa, respectively. The 21-kDa polypeptide was identifiedto be a heme-binding protein by staining the gel for peroxidaseactivity. The cytochrome c₅₅₁ was oxidized by flash light ina biphasic manner with half times of 90 and 390 µs, respectively,that coincided with the reduction half times of P840⁺. Threedistinct iron-sulfur centers assigned to F_A, F_B and F_x, respectively,from their g-values were detected by EPR spectroscopy at cryogenictemperature. These results suggest that the present preparationcontains a minimal functional unit of the RC of this bacterium,and that this complex appears to lie on a evolutionary linebetween RC's of purple bacteria and photosystem I. (Received August 18, 1992; Accepted October 28, 1992)     

Studies on the metabolism of a sulfur-oxidizing bacterium VII. Oxidation of sulfite by a cell-free extract of Thiobacillus thiooxidans

Properties of the cell-free extract, prepared from a strainof Thiobacillus thiooxidans by sonic disruption followed byfractionation with centrifugatiori, were investigated with referenceto its sulfite-oxidizing activity. Without the addition of cofactors the particulate fraction(F-P)catalyzed oxidation of sulfite with oxygen or bacterial cytochromec-552 obtained from Pseudomonas stutzeri as electron acceptor.TMPD reduced by ascorbic acid was also oxidized by F-P. Thesoluble fraction(F-S) showed no activity in oxidizing sulfiteand TMPD, but stimulated TMPD oxidation by F-P. Oxygen uptake with either sulfite or TMPD as substrate was inhibitedby KCN, NaN₃, CO and c-phenanthroline. CO-Inhibition was reversedby light. Reduction of cytochrome c-552 by sulfite was insensitiveto these agents. Antimycin A markedly inhibited sulfite oxidation with eitheroxygen or cytochrome c-552 as electron acceptor, but was withouteffect on TMPD oxidation. DDC and SAO, both strong inhibitors of sulfur oxidation, didnot affect sulfite and TMPD oxidations. Cytochromes of the a, b and c types were contained in F-P. Thesecytochromes were rapidly reduced when F-P was incubated withsulfite. Cytochrome(s) of the c type was present in F-S, too. ¹VI.=References (3) ²Partly supported by a grant from the Ministry of Education ³Present address: Sanyo Women's College, Hatsukaichi, Hiroshima738, Japan ⁴Present address: Department of Biochemistry, Hiroshima UniversitySchool of Dentistry, Hiroshima 734, Japan (Received May 15, 1970; )