Studies in the phototaxis of Rhodospirillum rubrum

Summary The threshold strength-duration relationships were determined for the phototactic excitation of Rhodospirillum rubrum by various pulses and pairs of pulses of change in light intensity. The recovery of excitability after a response was followed, and examples of rhythmic behavior were recorded.Exprimental results were found to be in fair agreement with data for other irritable systems and with the predictions of the theories of Rashevsky and Hill.The hypothesis was considered that all excitable systems might share a common mechanism for irritability, and the phototactic mechanisms of various unicellular organisms were discussed in this connection.     

The Dibromothymoquinone Effect on Membrane Potential Generation in Rhodospirillum rubrum Chromatophores

2,5-Dibromo-3-methyl-6-isopropyl benzoqui-none (DBMIB) inhibits the light-dependent membrane potential generation in Rhodospirillum rubrum chromatophores. The inhibition is relieved by electron donors and is obviously due to oxidation of the photosynthetic electron transfer chain components. In addition, high DBMIB concentrations elicit another effect probably caused by disruption of quinone functions in chromatophores. However, in quinone-depleted chromatophores and proteoliposomes containing the P-870 reaction center and light-harvesting antenna complexes, DBMIB stimulates membrane potential generation in the light, probably restoring some of the quinone-dependent processes in the membrane. DBMIB inhibits the inorganic pyrophosphate- and ATP-in-duced membrane potential generation in chromatophores.     

Complete primary structure of ribulosebisphosphate carboxylase/oxygenase from Rhodospirillum rubrum

Of the 14 cyanogen bromide fragments derived from Rhodospirillum rubrum ribulosebisphosphate carboxylase/oxygenase, four are too large to permit complete sequencing by direct means [F. C. Hartman, C. D. Stringer, J. Omnaas, M. I. Donnelly, and B. Fraij (1982) Arch. Biochem. Biophys. 219, 422-437]. These have now been digested with proteases, and the resultant peptides have been purified and sequenced, thereby providing the complete sequences of the original fragments. With the determination of these sequences, the total primary structure of the enzyme is provided. The polypeptide chain consists of 466 residues, 144 (31%) of which are identical to those at corresponding positions of the large subunit of spinach ribulosebisphosphate carboxylase/oxygenase. Despite the low overall homology, striking homology between the two species of enzyme is observed in those regions previously implicated at the catalytic and activator sites.     

The Structure of Rhodospirillum rubrum

Cells from serial cultures of R. rubrum, grown anaerobically in the light, were harvested at intervals from ½ to 15 days and sectioned for electron microscopy by conventional methods. Cells of this species possess a multilayered outer envelope, and the external cell surface is differentiated into ridges extending parallel or obliquely to the long axis of the cell. Cells from very young cultures resemble non-photosynthetic bacteria and contain only a granular cytoplasm, scattered high-density particles, and low-density areas corresponding to the chromatin areas observed by light microscopy. They contain neither the chromatophores nor the lamellar systems assumed by previous investigators to be characteristic of this species when grown anaerobically in the light. Chromatophores appear in cells from cultures older than about 12 hours, while systems of paired lamellae appear along with the chromatophores in cells from cultures older than about 8 days. Divergent opinions concerning the occurrence of chromatophores or lamellae in this species can be resolved on the basis of the age of cultures used in previous studies. Other changes occurring in cells from cultures of increasing age include the appearance of granular and reticulate cytoplasmic bodies and vacuoles, extension of the chromatin areas, and the appearance of a single membrane enclosing several chromatophores.     

Ferredoxin-dependent carbon assimilation in Rhodospirillum rubrum

Summary Evidence has been presented that a soluble fraction from R. rubrum cells contains two new primary carboxylation reactions which depend on the reducing power of ferredoxin: (a) pyruvate synthase which brings about a synthesis of pyruvate from acetyl-CoA and CO₂ and (b) -ketoglutarate synthase which brings about a synthesis of -ketoglutarate from succinyl-CoA and CO₂. The soluble fraction of R. rubrum cells contains also a series of other enzymes which, together with the ferredoxin-dependent enzymes, constitutes a reductive carboxylic acid cycle—a new cyclic pathway for CO₂ assimilation that was first found in the photosynthetic bacterium, Chlorobium thiosulfatophilum.Dedicated to C. B. van Niel on the occasion of his 70th birthday.Aided by grants from the National Institute of General Medical Sciences, Office of Naval Research and the National Science Foundation.     

A picosecond-absorption study on bacteriochlorophyll excitation,trapping and primary-charge separation in chromatophores of Rhodospirillum rubrum

Absorbance-difference spectra and kinetics of absorbance changes were measured of chromatophores of Rhodospirillum rubrum by means of picosecond-absorption spectroscopy. A 35 ps excitation pulse at 532 nm produced absorbance changes due to the formation and decay of excited states of antenna pigments (Nuijs, A.M., Van Grondelle, R., Joppe, H.L.P., Van Bochove, A.C. and Duysens, L.N.M. (1985) Biochim. Biophys. Acta 810, 94–105), and, when open reaction centers were present, also those due to charge separation and primary electron transport. At low excitation energy density the lifetime of singlet-excited antenna bacteriochlorophyll was 80 ± 10 ps when the reaction centers were initially open and 200–400 ps when the primary electron donor was oxidized. Under the former conditions photooxidation of the primary donor occurred with a time constant of 70 ± 10 ps. Reduction of an electron-acceptor complex in the reaction center, probably involving both bacteriochlorophyll and bacteriopheophytin, was observed. Reoxidation of this acceptor occurred with a time constant of 200–300 ps. When the ubiquinone acceptor was reduced chemically, the primary radical pair decayed by recombination with a time constant of about 4 ns at high flash-energy densities, and of about 10 ns at lower energy densities. This dependence of the lifetime of the radical pair on the flash intensity was explained in terms of quenching processes by carotenoid triplet states in the antenna, and indicated a standard free-energy difference between the radical pair and the singlet-excited state of antenna bacteriochlorophyll of about 160 meV.     

Effect of nucleotides on the activity of dinitrogenase reductase ADP-ribosyltransferase from Rhodospirillum rubrum

The mechanism by which MgADP stimulates the activity of dinitrogenase reductase ADP-ribosyltransferase (DRAT) has been examined by using dinitrogenase reductases from Rhodospirillum rubrum, Klebsiella pneumoniae, and Azotobacter vinelandii as acceptor substrates. In the presence of 0.2 mM NAD, maximal rates of ADP-ribosylation of all three acceptors were observed at an ADP concentration of 150 microM; in the absence of added ADP, DRAT activity with the dinitrogenase reductases from R. rubrum and K. pneumoniae was less than 5% of the maximal rate, but the A. vinelandii protein was ADP-ribosylated at 40% of the maximal rate. Of eight dinucleotides tested, only ADP, 2'-deoxy-ADP, and ADP-beta S served as activators of the DRAT reaction; ADP, 2'-deoxy-ADP, and ADP-beta S were also the only dinucleotides found which inhibited acetylene reduction activity by dinitrogenase reductase. The dinucleotide specificities for both DRAT activation and acetylene reduction inhibition were the same for all three dinitrogenase reductases. In the DRAT reaction with the dinitrogenase reductases from K. pneumoniae and A. vinelandii, the Km for NAD was 30-fold higher in the absence of ADP than in its presence; the Km for NAD with the R. rubrum acceptor was not measurable. In the presence of saturating ADP, ADP-ribosylation of dinitrogenase reductase from R. rubrum was inhibited 63% by 1.5 mM ATP. It is concluded that MgADP stimulates DRAT activity by lowering the Km for NAD and that MgADP exerts its effect by binding to dinitrogenase reductase. MgATP inhibits DRAT activity by competing with MgADP for binding to dinitrogenase reductase.     

Photosynthetic metabolism of propionate in Rhodospirillum rubrum

Summary As in the case of oxidative metabolism, the photosynthetic metabolism of propionate in Rhodospirillum rubrum begins with a carboxylation yielding succinate. This conclusion is based on experiments in which radioactive propionate (1-C¹⁴ and 2-C¹⁴) is administered in the presence of carrier lactate, pyruvate, succinate, and acrylate, and on studies of the inhibitory action of malonate.