Complete mitochondrial genome of a carabid beetle,Damaster mirabilissimus mirabilissim (Coleoptera: Carabidae)

In the present study, we report the 16 823‐bp long complete mitochondrial genome (mitogenome) of a carabid beetle, Damaster mirabilissimus mirabilissim (Coleoptera: Carabidae), which is endangered in Korea. The gene arrangement of D. m. mirabilissim mitogenome is identical to the most common type found in insects. The start codon of the D. m. mirabilissim COI gene is a typical ATN codon. On the other hand, the initiation codon for ND1 gene is TTG, instead of ATN. All transfer RNAs (tRNAs) exhibit a stable canonical clover‐leaf structure, except for tRNA^Ser(AGN), the dihydrouridine arm of which forms a simple loop. The 1703‐bp long A+T‐rich region is the second longest among the complete adephagan mitogenome sequences, next to Macrogyrus oblongus belonging to Gyrinoidea. One of the unusual features of the genome is the presence of a tRNA^Leu(UUR)‐like sequence in the A+T‐rich region. This sequence displays the proper anticodon sequence and the potential to form secondary structures, but also harbors many mismatches in the stems.     

Model of succession in degraded areas based on carabid beetles (Coleoptera, Carabidae)

Degraded areas constitute challenging tasks with respect to sustainable management of natural resources. Maintaining or even establishing certain successional stages seems to be particularly important. This paper presents a model of the succession in five different types of degraded areas in Poland based on changes in the carabid fauna. Mean Individual Biomass of Carabidae (MIB) was used as a numerical measure for the stage of succession. The run of succession differed clearly among the different types of degraded areas. Initial conditions (origin of soil and origin of vegetation) and landscape related aspects seem to be important with respect to these differences. As characteristic phases, a 'delay phase', an 'increase phase' and a 'stagnation phase' were identified. In general, the runs of succession could be described by four different parameters: (1) 'Initial degradation level', (2) 'delay', (3) 'increase rate' and (4) 'recovery level'. Applying the analytic solution of the logistic equation, characteristic values for the parameters were identified for each of the five area types. The model is of practical use, because it provides a possibility to compare the values of the parameters elaborated in different areas, to give hints for intervention and to provide prognoses about future succession in the areas. Furthermore, it is possible to transfer the model to other indicators of succession.     

Ground beetle (Coleoptera: Carabidae) phenology, diversity, and response to weed cover in a turfgrass ecosystem

Despite being fragmented and highly disturbed habitats, urban turfgrass ecosystems harbor a surprising diversity of arthropods. The suitability of turf as arthropod habitat, however, likely depends on the extent and types of pesticides and fertilizers used. For example, moderate levels of weed cover in low-input lawns may provide alternative food resources. We conducted a 2-yr field study to: 1) characterize the ground beetle (Carabidae) species assemblage in turfgrass, and 2) assess the direct and indirect effects of lawn management on carabid communities. Weed cover and beetle activity were compared among four lawn management programs: 1) consumer/garden center, 2) integrated pest management (IPM), 3) natural organic, and 4) no-input control. Nearly 5,000 carabid beetles across 17 species were collected with the predator Cyclotrachelus sodalis LeConte numerically dominating the trap catch (87% and 45% of individuals in 2005 and 2006, respectively). Populations of C. sodalis underwent a distinct peak in activity during the third week of June, whereas omnivorous and granivorous species tended to occur at far lower levels and were less variable over the season. We found no evidence for direct effects of lawn management on carabid species diversity; however, we detected an indirect effect mediated by variation in weed cover. Seed-feeding species were positively correlated with turf weeds early in 2006, whereas strictly predaceous species were not. Thus, turf management programs that lead to changes in plant species composition (i.e., herbicide regimes) may indirectly shape epigeal arthropod communities more strongly than the direct effects of insecticide use.     

Impact of commercial forest management on geophilous carabid beetles (Coleoptera: Carabidae) in tall,wet Eucalyptus obliqua forest in southern Tasmania

Abstract The impact of silvicultural practices (clearfelling, slash burning and sowing) on carabid beetle communities in tall wet Eucalyptus obliqua forests in southern Tasmania was examined using traplines of pitfalls in a chronosequence of regenerating coupes. Total species richness (n= 18) was modest compared to other temperate forests and was not systematically changed by forest management, although it was considerably lower in 20 year old regrowth than in younger regrowth or old-growth controls, possibly due to habitat simplification. The Shannon-Weiner Index was at a minimum in intermediate aged regeneration. TWINSPAN analysis assisted recognition of beetle communities typical of broad stages in the forest succession, with a major dichotomy between most old-growth sites plus young sites and intermediate plus advanced regeneration sites. Vector fitting of environmental variables in an ordination of the sites by non-metric multidimensional scaling revealed a significant influence for the age of regeneration and litter depth, but not bare ground percentage or soil pH. Survival of carabids in the habitat mosaic created by commercial forestry activity is likely to depend on both reinvasion from edges and survival of individuals in the fire-protected refuges that exist within the coupes. Pioneer species were winged, small in size, and non-endemic whereas the opposite was true of the fauna in the older sites. Carabids in eucalypt forests have good potential as indicators but their seasonality in occurrence demands that sampling be extended over most of the year.     

Using structural sustainability for forest health monitoring and triage: Case study of a mountain pine beetle (Dendroctonus ponderosae)-impacted landscape

Heavy disturbance-induced mortality can negatively impact forest biota, functions, and services by drastically altering the forest structures that create stable environmental conditions. Disturbance impacts on forest structure can be assessed using structural sustainability⿿the degree of balance between living and dead portions of a tree population⿿s size-class distribution⿿which is the basis of baseline mortality analysis. This analysis uses a conditionally calibrated reference level (i.e., baseline mortality) against which to detect significant mortality deviations without need for historical references. Recently, a structural sustainability index was developed by parameterizing results of this analysis to allow spatial and temporal comparisons within or among forested landscapes. The utility of this index as a tool for forest health monitoring programs and triage decisions has not been examined. Here, we investigated this utility by retrospectively analyzing the structural sustainability of a mountain pine beetle (Dendroctonus ponderosae)-impacted, lodgepole pine (Pinus contorta)-dominated landscape annually from 2000 to 2006 as well as among watersheds. We show that temporal patterns of structural sustainability at the landscape-level reflect accumulating beetle-induced mortality as well as beetle-lodgepole pine ecology. At the watershed-level, this sustainability spatially varied with 2006 beetle-induced mortality. Further, structural sustainability satisfies key criteria for effective indicators of ecosystem change. We conclude that structural sustainability is a viable tool upon which to base or supplement forest health monitoring and triage programs, and could potentially increase the efficacy of such programs under current and future climate change-associated disturbance patterns.     

Assignment and evaluation of ground beetle (Coleoptera: Carabidae) assemblages to sites on different scales in a grassland landscape

Carabid beetles and environmental parameters were investigated in 52 grassland sites with three replicate pitfall traps in each site and in the valley of the River Eider in Schleswig–Holstein (northern Germany) with 61 pitfall traps. Environmental parameters included water content of soil, sand content, organic matter content and pH. Ground beetle assemblages were derived by detrended correspondence analyses (DCA) and characterised by the specific environmental conditions as means for each assemblage. On the regional scale including all investigated sites of Schleswig–Holstein, five assemblages were differentiated. On the local scale including the investigated sites in the valley of the River Eider, three assemblages were found corresponding well with those found on the regional scale. Environmental conditions at the sites of the five assemblages were correlated with land use data, soil types, and water level stages provided by three maps of a geographic information system (GIS). The GIS maps were combined to develop smaller areas with land use, soil type and water level stage information. The characteristic environmental conditions were assigned to each area to derive the spatial distribution of the five ground beetle assemblages. Spatial prediction was correct for 65% of investigated sites. The potential area of each assemblage was estimated for the valley. The different grassland areas were evaluated as potential habitats for ground beetle species comparing total species richness with the regional species richness of each assemblage. The comparison shows that species richness in the evaluated assemblages is relatively low compared to the regional potential.     

Ground beetle (Coleoptera: Carabidae) assemblages associated with a satoyama landscape in Japan: the effects of soil moisture,weed height,and distance from woodlands

Agricultural landscapes generally include not only crop fields but also semi-natural habitats. In Japan, such a mixed rural landscape is called “satoyama.” Although ground beetles are potential predators of pests, the environmental factors that determine their distribution in Japanese rural landscapes have not been fully elucidated. To understand the effects of distance from woodland edges, soil moisture, and weed height on assemblages of carabid beetles, we examined the number of adult beetles in pitfall traps placed in a satoyama landscape in the lowlands of western Honshu, Japan. Our results show that the carabid species could be largely differentiated into woodland, intermediate, and open-land species. The “intermediate species” group includes species that depend on woodland or woodland edges for at least part of their life cycles. Paddy fields must have long provided semi-natural habitats that complement those in natural grasslands and wetlands for open-land beetles that prefer wet conditions. Weeds can also increase the abundance of some intermediate and woodland species; thus, the arrangement of such landscape elements as woodlands and paddies can determine the species richness and abundance of ground beetles in agricultural fields.     

Development of an improved attractive lure for the pine shoot beetle, Tomicus piniperda (Coleoptera: Scolytidae)

Abstract 1 The pine shoot beetle, Tomicus piniperda (L.) (Coleoptera: Scolytidae), is an exotic pest of pine, Pinus spp., and was first discovered in North America in 1992. 2 Although primary attraction to host volatiles has been clearly demonstrated for T. piniperda, the existence and role of secondary attraction to insect‐produced pheromones have been widely debated. 3 Currently, commercial lures for T. piniperda include only the host volatiles α‐pinene in North America and α‐pinene, terpinolene and (+)‐3‐carene in Europe. Several potential pheromone candidates have been identified for T. piniperda. 4 We tested various combinations of host volatiles and pheromone candidates in Michigan, U.S.A., and Ontario, Canada, to determine an optimal blend. 5 Attraction of T. piniperda was significantly increased when trans‐verbenol (95% pure, 3.2%cis‐verbenol content) was added with or without myrtenol to α‐pinene or to blends of α‐pinene and other kairomones and pheromone candidates. 6 Our results, together with other research demonstrating that trans‐verbenol is produced by T. piniperda, support the designation of trans‐verbenol as a pheromone for T. piniperda. A simple operational lure consisting of α‐pinene and trans‐verbenol is recommended for optimal attraction of T. piniperda.     

Isolation and characterization of 16 microsatellite loci in the mountain pine beetle, Dendroctonus ponderosae Hopkins (Coleoptera: Curculionidae: Scolytinae)

We isolated 16 polymorphic microsatellite loci in the mountain pine beetle (Dendroctonus ponderosae Hopkins) and developed conditions for amplifying these markers in four multiplex reactions. Three to 14 alleles were detected per locus across two sampled populations. Observed and expected heterozygosities ranged from 0.000 to 0.902 and from 0.100 to 0.830, respectively. Three loci deviated from Hardy-Weinberg equilibrium in one sampled population. One of these loci may be sex linked. These markers will be useful in the study of population structure in this important pest species.     

Initial responses of rove and ground beetles (Coleoptera,Staphylinidae, Carabidae) to removal of logging residues following clearcut harvesting in the boreal forest of Quebec,Canada

Increased interest in biomass harvesting for bioenergetic applications has raised questions regarding the potential ecological consequences on forest biodiversity. Here we evaluate the initial changes in the abundance, species richness and community composition of rove (Staphylinidae) and ground beetles (Carabidae), immediately following 1) stem-only harvesting (SOH), in which logging debris (i.e., tree tops and branches) are retained on site, and 2) whole-tree harvesting (WTH), in which stems, tops and branches are removed in mature balsam fir stands in Quebec, Canada. Beetles were collected throughout the summer of 2011, one year following harvesting, using pitfall traps. Overall catch rates were greater in uncut forest (Control) than either stem-only or whole-tree harvested sites. Catch rates in WTH were greater than SOH sites. Uncut stands were characterized primarily by five species: Atheta capsularis, Atheta klagesi, Atheta strigosula, Tachinus fumipennis/frigidus complex (Staphylinidae) and to a lesser extent to Pterostichus punctatissimus(Carabidae). Increased catch rates in WTH sites, where post-harvest biomass was less, were attributable to increased catches of rove beetles Pseudopsis subulata, Quedius labradorensis and to a lesser extent Gabrius brevipennis. We were able to characterize differences in beetle assemblages between harvested and non-harvested plots as well as differences between whole tree (WTH) and stem only (SOH) harvested sites where logging residues had been removed or left following harvest. However, the overall assemblage response was largely a recapitulation of the responses of several abundant species.     

The impact of forest cutting on the diversity of ground beetles (Coleoptera: Carabidae) in the southern Appalachians

Abstract. 1. Carabid beetles were sampled by means of pitfall traps on several clearcut areas and in adjacent forests.
2. A hierarchical analysis of diversity revealed a significant increase in the within-genus component of species diversity after forest cutting.
3. This trend in intrageneric diversity was obscured, with respect to total species diversity, by a nonsignificant reduction in diversity at the generic level.
4. The increase in the within-genus component of species diversity following forest cutting was consistent with the hypothesis that disturbance of a cornmunity can disrupt processes of competitive exclusion.     

The Response of Ground Beetles (Coleoptera: Carabidae) to Selection Cutting in a South Carolina Bottomland Hardwood Forest

We compared the response of ground beetles (Coleoptera: Carabidae) to the creation of canopy gaps of different size (0.13, 0.26, and 0.50 ha) and age (1 and 7 years) in a bottomland hardwood forest (South Carolina, USA). Samples were collected four times in 2001 by malaise and pitfall traps placed at the center and edge of each gap, and 50 m into the surrounding forest. Species richness was higher at the center of young gaps than in old gaps or in the forest, but there was no statistical difference in species richness between old gaps and the forests surrounding them. Carabid abundance followed the same trend, but only with the exclusion of Semiardistomis viridis (Say), a very abundant species that differed in its response to gap age compared to most other species. The carabid assemblage at the gap edge was very similar to that of the forest, and there appeared to be no distinct edge community. Species known to occur in open or disturbed habitats were more abundant at the center of young gaps than at any other location. Generalist species were relatively unaffected by the disturbance, but one species (Dicaelus dilatatus Say) was significantly less abundant at the centers of young gaps. Forest inhabiting species were less abundant at the centers of old gaps than in the forest, but not in the centers of young gaps. Comparison of community similarity at various trapping locations showed that communities at the centers of old and young gaps had the lowest similarity (46.5%). The community similarity between young gap centers and nearby forest (49.1%) and old gap centers and nearby forest (50.0%) was similarly low. These results show that while the abundance and richness of carabids in old gaps was similar to that of the surrounding forest, the species composition between the two sites differed greatly.     

Longhorn beetles and predatory clerid beetles attracted to a blend of longhorn beetle pheromone compounds in a Central European oak forest (Coleoptera: Cerambycidae,Cleridae)

1. A blend of longhorn beetle pheromones was tested as a generic attractant in a Central European oak forest. Overall, 20 cerambycid species totalling 1250 specimens were captured using two trap types.
2. More adults of Phymatodes testaceus and Leiopus nebulosus nebulosus were attracted to pheromone-baited traps compared to solvent controls. Significant numbers of four other species were caught by panel traps but not funnel traps. For the cerambycine Pyrrhidium sanguineum, significantly more beetles were caught in treatment traps than controls. For the cerambycine Anaglyptus mysticus, lepturines Cortodera humeralis and Rhagium sycophanta, the numbers of beetles caught in treatment or control traps were similar, indicating no attraction to the lure blend. Adults of a predatory clerid beetle Clerus mutillarius were caught in significantly larger numbers by both baited trap types in comparison to controls, totalling 1514 specimens.
3. Antennae of both sexes of C. mutillarius showed responses to 3-hydroxyhexan-2-one and 2-methylbutan-1-ol, and males also responded to syn-2,3-hexanediol.
4. Strong attraction of C. mutillarius suggests eavesdropping on the pheromones of cerambycids and that such attractant baits, without traps, might be used to manipulate the local population density of predators in a push-pull biological control program.

     

Tree colonization by the Asian longhorn beetle,Anoplophora glabripennis (Coleoptera: Cerambycidae): effect of habitat and tree suitability

Tree colonization and feeding activity of the invasive wood‐borer Asian longhorn beetle (Anoplophora glabripennis), an Asian pest introduced into North America and Europe, was studied in a newly invaded area in Italy. The hypothesis being tested was that the reproductive success of the insect depend on habitat type and tree suitability. Adult beetles were caged on branches of host and nonhost species, in both urban and forest habitats. Two months later, number and size of feeding patches on plant tissues, eggs laid, and surviving larvae were assessed. Bark concentration of C and N was also measured from the same trees. Results indicated that the mean area of plant tissues consumed by adult feeding was significantly larger on trees growing in forest than in urban habitat, although within the same habitat there were no differences between susceptible and nonsusceptible trees. ALB tree colonization, in terms of number of eggs laid and young larvae survival, was not affected by habitat while it was higher on susceptible trees. Although trees growing in forests had a lower nitrogen concentration, they allowed colonization rates similar to those of trees growing in the urban habitat. Hence, the amount of carbon and nitrogen did not fully explain tree suitability or habitat selection. We suggest compensatory feeding as a potential mechanism that might explain this peculiar situation, as supported by a more intensive feeding activity recorded on trees in the forest. Suitability of different trees may be due to other factors, such as secondary chemical compounds.     

A quarter of a century succession of epigaeic beetle assemblages in remnant habitats in an urbanized matrix (Coleoptera, Carabidae)

We studied the long-term (23-24 years) species turnover and succession of epigaeic beetle assemblages (Coleoptera: Carabidae, incl. Cicindelinae) in three remnant habitats [cottonwood (Populus spp.) and oak (Quercus spp.) stands, and old fields] that are embedded within highly urbanized areas in central Minnesota. A total of 9,710 beetle individuals belonging to 98 species were caught in three sampling years: 1980, 1981 and 2005 in pitfall traps in identical locations within each habitat. Results indicate that there were 2-3 times greater trap catches in 2005 than in 1980 (cottonwood and oak stands, and old fields) and 1.4-1.7 times greater species diversity of beetles in 2005 than in the 1980-1981 suggesting increased habitat association by beetles over time. Although there were no significant differences in catches between 2005 and 1981 (only cottonwood stands and old fields), there was a trend where more beetles were caught in 2005. At the species-level, 10 times more of an open-habitat carabid species, Cyclotrachelus sodalis sodalis LeConte, was caught in 2005 than in 1980. However, trap catches of five other abundant carabid species [Pterostichus novus Straneo, Platynus decentis (Say), Platynus mutus (Say), Calathus gregarius (Say), and Poecilus lucublandus lucublandus (Say)] did not change indicating population stability of some beetle species. These remnant habitats were increasingly colonized by exotic carabid species as Carabus granulatus granulatus Linneaus, Clivina fossor (Linneaus) and Platynus melanarius (Illiger), that were trapped for the first time in 2005. Species composition of epigaeic beetles was quite distinct in 2005 from 1980 with 39 species reported for the first time in 2005, indicating a high turnover of assemblages. At the habitat-level, greatest species diversity was in cottonwood stands and lowest was in old fields, and all habitat types in 2005 diverged from those in 1980s, but not cottonwood stands in 1981. As our sampled areas are among some of the last remnants of the original oak savanna habitats in central Minnesota, we hypothesize that conservation of these sites may be critical to maintaining epigaeic beetle assemblages under increased urbanization pressure.     

Phylogeny and biogeography of the Japanese rhinoceros beetle,Trypoxylus dichotomus (Coleoptera: Scarabaeidae) based on SNP markers

The Japanese rhinoceros beetle Trypoxylus dichotomus is one of the largest beetle species in the world and is commonly used in traditional Chinese medicine. Ten subspecies of T. dichotomus and a related Trypoxylus species (T. kanamorii) have been described throughout Asia, but their taxonomic delimitations remain problematic. To clarify issues such as taxonomy, and the degree of genetic differentiation of Trypoxylus populations, we investigated the genetic structure, genetic variability, and phylogeography of 53 specimens of Trypoxylus species from 44 locations in five Asian countries (China, Japan, Korea, Thailand, and Myanmar). Using specific‐locus amplified fragment sequencing (SLAF‐seq) techniques, we developed 330,799 SLAFs over 114.16M reads, in turn yielding 46,939 high‐resolution single nucleotide polymorphisms (SNPs) for genotyping. Phylogenetic analysis of SNPs indicated the presence of three distinct genetic groups, suggesting that the various subspecies could be treated as three groups of populations. PCA and ADMIXTURE analysis also identified three genetic clusters (North, South, West), which corresponded to their locations, suggesting that geographic factors were important in maintaining within population homogeneity and between population divergence. Analyses of SNP data confirmed the monophyly of certain subspecies on islands, while other subspecies (e.g., T. d. septentrionalis) were found to be polyphyletic and nested in more than one lineage. AMOVA demonstrated high level of differentiation among populations/groups. Also, pairwise F_ST values revealed high differentiation, particularly between South and West, as well as between North and South. Despite the differentiation, measurable gene flow was inferred between genetic clusters but at varying rates and directions. Our study demonstrated that SLAF‐seq derived markers outperformed 16S and COII sequences and provided improved resolution of the genetic differentiation of rhinoceros beetle populations from a large part of the species’ range.     

小兴安岭阔叶红松林地表甲虫Metacommunity格局

Metacommunity理论框架为理解生物群落的时空格局及其构建机制提供了一个强有力的方法。然而,少有研究揭示土壤动物metacommunity的格局及其构建机制,小尺度空间的研究更是少见。于2015年分别在凉水和丰林小兴安岭典型阔叶红松林长期动态监测样地内,通过空间直观定位调查监测的方法获得地表甲虫群落,揭示小尺度空间(300 m)地表甲虫metacommunity的格局,并进一步分析地形、土壤因子与这种metacommunity格局的相关性。结果表明:镶嵌型(nestedness)和随机型(random)是小尺度空间地表甲虫metacommunity的常见格局。地表甲虫的metacommunity格局具有类群依赖性,步行虫科和葬甲科多形成镶嵌型格局,而隐翅虫科则仅形成随机型格局。地表甲虫metacommunity格局具有季节波动性,在相对温暖的季节易形成显著的镶嵌型格局,而在相对寒冷的季节多为随机型格局。凉水和丰林地表甲虫的metacommunity格局没有明显差异。地形和土壤因子对地表甲虫metacommunity格局有重要的影响,该影响过程相对复杂,依类群和时间而异。本实验表明镶嵌型和随机型是小尺度空间小兴安岭典型阔叶红松林地表甲虫的常见格局,地形、土壤因子对这些格局的形成有重要的影响。     

The ground beetle fauna (Coleoptera:Carabidae) of abandoned fields, as related to plant cover, previous management and succession stage

This study describes differences in species richness, diversity and composition of Carabidae in gradients from recently abandoned, non-grazed fields over stages of overgrowth into forest on formerly agricultural land in a large, sandy outwash plain, south Sweden. Totally 80 pitfall traps, (4 succession stages, each represented by 4 sites; 5 traps per site) installed on 29 March 2006 were emptied continuously until 1 November. Succession stages were: 7–10 y old fallows after cereals with thin and low vegetation of small perennial and annual herbs (Ia), 7–10 y old fallows abandoned as lay with a rich plant cover of broad-leaved grasses and herbs (Ib), 20–25 y old fallows with a shrub layer of colonising pine and narrow-leaved grasses (II), and ca 80 y old pine stands planted on originally cultivated ground with a rich shrub layer but lacking herbaceous plants (III). A total of 14,068 individuals of 71 carabid species were captured. Species richness was highest in stage Ib, whereas Shannon species diversity was highest in Ia. Both species richness and diversity were lowest in III, sites II being intermediate. Total number of individuals captured site⁻¹ was low in III, being highest in Ib. Mean body weight and total dry mass of species, however, increased with succession stage. Amara and Harpalus species were most common in Ia but important also in Ib, with large differences in species composition between the two stages. These genera were almost lacking in III, where Carabus spp. and Pterostichus niger dominated. The share of Calathus was highest in II, where C. fuscipes played a dominating role. P. versicolor dominated in Ib, whereas P. lepidus was quite common in all non-forest stages. Duration and intensity of capturing activity necessary to find most species of the sites are discussed. Many scarce or rare species in south Scandinavia were captured, mainly in Ib. Abandoned non-grazed fields are important hibernating and breeding refuges for many carabids. Using extensive and non-expensive management this ought to be considered as an additional alternative in environment conservation policy, which now usually recommends economically subsidised grazing on set-aside land.