Lack of homology between two haloacetate dehalogenase genes encoded on a plasmid from Moraxella sp. strain B.

Two genes encoding haloacetate dehalogenases, H-1 and H-2, are closely linked on a plasmid from Moraxella sp. strain B. H-1 predominantly acts on fluoroacetate, but H-2 does not. To elucidate the molecular relationship between the two enzymes, we compared their structural genes. Two restriction fragments of the plasmid DNA were subcloned on M13 phages and their nucleotide sequences were determined. The sequence of each fragment contained an open reading frame that was identified as the structural gene for each of the two dehalogenases on the basis of the following criteria; N-terminal amino acid sequence, amino acid composition, and molecular mass. The genes for H-1 and H-2, designated dehH1 and dehH2, respectively, had different sizes (885 bp and 675 bp) and G+C contents (58.3% and 53.4%). Sequence analysis revealed no homology between the two genes. We concluded that the dehalogenases H-1 and H-2 have no enzyme-evolutionary relationship. The deduced amino acid sequence of the dehH1 gene showed significant similarity to those of three hydrolases of Pseudomonas putida and a haloalkane dehalogenase of Xanthobacter autotrophicus. The dehH2 coding region was sandwiched between two repeated sequences about 1.8 kb long, which might play a part in the frequent spontaneous deletion of dehH2 from the plasmid.     

Use of haloacetate dehalogenase genes as selection markers forEscherichia coli andPseudomonas vectors

The haloacetate dehalogenase gene,dehH2, cloned fromMoraxella sp. strain B could be used as a selection marker gene for vectors inEscherichia coli andPseudomonas putida. Haloacetates, especially iodoacetate, inhibit the growth of some microorganisms. ThedehH2 gene introduced into the cells conferred iodoacetate resistance on them. Therefore,E. coli andP. putida transformed with vectors marked withdehH2 could be easily selected on plates containing iodoacetate.     

Enhanced doxorubicin production by Streptomyces peucetius using a combination of classical strain mutation and medium optimization

Abstract

Doxorubicin (DXR), which is produced by Streptomyces peucetius, is an important anthracycline-type antibiotic used for the treatment of various cancers. However, due to the low DXR productivity of wild-type S. peucetius, it is difficult to produce DXR by one-step fermentation. In this study, a DXR-resistance screening method was developed to screen for DXR high-producing mutants. Then, S. peucetius SIPI-11 was treated several times with UV and ARTP (atmospheric and room temperature plasma) to induce mutations. Treated strains were screened by spreading on a DXR-containing plate, isolating a mutant (S. peucetius 33-24) with enhanced DXR yield (570?mg/L vs. 119?mg/L for the original strain). The components of the fermentation medium, including the carbon and nitrogen sources, were optimized to further enhance DXR yield (to 850?mg/L). The pH of the fermentation medium and culture temperature were also optimized for effective DXR production. Finally, DXR production by S. peucetius 33-24 was investigated in flask culture and a fermenter. The yield of DXR was as high as 1100?mg/L in a 5-L fermenter, which is the highest DXR productivity reported thus far, suggesting that S. peucetius 33-24 has the potential to produce DXR by direct fermentation.     

木聚糖酶生产菌株的筛选及产酶条件的优化

以甘蔗渣半纤维素为碳源,从垃圾场土壤中分离到6株分解半纤维素的菌株。通过固态发酵的木聚糖酶活力比较筛选到1株木聚糖酶活力较高的菌株。该菌株18S rDNA序列与曲霉（Aspergillus sp.）的同源性达97%,根据对菌株形态学分析和18S rDNA序列分析的结果,将该菌株鉴定为曲霉HQ3。HQ3的最佳产酶条件为：甘蔗渣:麸皮为7:3（W/W）,固液比为1:4（W/W）,尿素0.4 %,pH7.0,温度30℃,发酵产酶时间4 d。在最佳产酶条件下,其木聚糖酶活最高可达3421U/g干曲。     

Enhancement of lipase production from hydrocarbons by mutation of Trichosporon fermentans

Lipase high-producing mutants with petroleum products as carbon sources were successfully induced from Trichosporon fermentans WU-C12 by ultraviolet (UV) light irradiation. In the first mutation step, one mutant strain, PU-30, derived from strain WU-C12 was selected. The productivity of extracellular lipase of PU-30 reached 58 units (U)/ml in the medium containing kerosene, being approximately twice the productivity of the parental strain WU-C12. In the second mutation step, the mutant strain 2PU-18 was induced from strain PU-30. In medium containing kerosene, gas oil and liquid paraffin, the 2PU-18 produced 70 U/ml, 62 U/ml and 60 U/ml of extracellular lipase, respectively. When various n-alkanes (C₈-C₁₈) were used as carbon sources, the parental strain WU-C12 produced more than 20 U/ml of lipase only from C₉-C₁₂ alkanes, but 2PU-18 could produce more than 50 U/ml of lipase from C₈-C₁₈ alkanes. When cultivated for 3 days in medium containing liquid paraffin, the activity ratios of extracellular lipase to total lipase and the values of extracellular lipase activity per dry-cell weight were 0.44 and 0.65 U/mg for WU-C12, and 0.62 and 1.82 U/mg for 2PU-18, respectively. These results indicate that the mutant strain 2PU-18 is superior in both total lipase productivity and permeability of lipase to the parental strain WU-C12 when petroleum products are used as carbon sources. Correspondence to: S. Usami     

L-组氨酸产生菌的选育及发酵条件优化

以粘质沙雷氏菌（Serratiamarcescens）ATCC31026为出发菌株,经过硫酸二乙酯（DES）、亚硝基胍（NTG）和紫外（uV）逐级诱变,选育出了一株具有3-氨基-1,2,4-三氮唑抗性（AMTr）、6-巯基嘌呤抗性（6．MPr）、组氨酸甲酯抗性（HEr）、2-硫尿嘧啶抗性（2-Tur）、D-组氨酸抗性（DHr）等遗传标记的突变株ZJZ625（AMTr6．MPrHEr2-TUrDHr）,L-组氨酸产量由最初的2．0g／L提高到7．6g/L。对ZJZ625进行培养基及培养条件优化,研究了单因素对发酵的影响,由响应面分析得出最佳培养基配方,使最终产量达到9．7g／L。     

Characterization of a class II defective transposon carrying two haloacetate dehalogenase genes from Delftia acidovorans plasmid pUO1

The two haloacetate dehalogenase genes, dehH1 and dehH2, on the 65-kb plasmid pUO1 from Delftia acidovorans strain B were found to be located on transposable elements. The dehH2 gene was carried on an 8.9-kb class I composite transposon (TnHad1) that was flanked by two directly repeated copies of IS1071, IS1071L and IS1071R. The dehH1 gene was also flanked by IS1071L and a truncated version of IS1071 (IS1071N). TnHad1, dehH1, and IS1071N were located on a 15.6-kb class II transposon (TnHad2) whose terminal inverted repeats and res site showed high homology with those of the Tn21-related transposons. TnHad2 was defective in transposition because of its lacking the transposase and resolvase genes. TnHad2 could transpose when the Tn21-encoded transposase and resolvase were supplied in trans. These results demonstrated that Tn Had2 is a defective Tn21-related transposon carrying another class I catabolic transposon.     

A single point mutation enhances hydroxynitrile synthesis by halohydrin dehalogenase

The cyanide-mediated ring opening of epoxides catalyzed by halohydrin dehalogenases yields β-hydroxynitriles that are of high interest for synthetic chemistry. The best studied halohydrin dehalogenase to date is the enzyme from Agrobacterium radiobacter, but this enzyme (HheC) exhibits only low cyanolysis activities. Sequence comparison between a pair of related halohydrin dehalogenases from Corynebacterium and Mycobacterium suggested that substitution of a threonine that interacts with the active site might be responsible for the higher cyanolytic activity of the former enzyme. Here we report that a variant of HheC in which this substitution (T134A) is adopted displays an up to 11-fold higher activity in cyanide-mediated epoxide ring-opening. The mutation causes removal of the hydrogen bond between residue 134 and the side chain O of the active site serine 132, which donates a hydrogen bond to the substrate oxygen. The mutation also increases dehalogenase rates with various substrates. Structural analysis revealed that the anion-binding site of the mutant enzyme remained unaltered, showing that the enhanced activity is due to altered interactions with the substrate oxygen rather than changes in the nucleophile binding site.     

Enhancement of succinic acid production by osmotic-tolerant mutant strain of Actinobacillus succinogenes

Fermentation and succinic acid production by Actinobacillus succinogenes YZ0819 was inhibited by high NaCl. To enhance the resistance of this strain to osmotic stress, an NaCl-tolerant mutant strain of A. succinogenes (CH050) was screened and selected through a continuous culture using survival in 0.7 M NaCl as the selection criterion. Using Na₂CO₃ as the pH regulator and glucose as the carbon source in batch fermentation, the isolated osmo-resistant stain, A. succinogenes CH050, produced up to 66 g/l succinic acid with a yield of 73.37% (w/w). The concentration of succinic acid and mass yield were increased by 37.5 and 4.37%, respectively, compared to the parent strain. The dry cell weight reached 10.1 g/l, which is 37% higher than that of the parent strain. The high tolerance of A. succinogenes CH050 to osmotic stress increased improved the succinic acid production from batch fermentation.     

深红虫草高产卵孢菌素的培养基筛选及发酵条件优化

本研究以提高深红虫草Cordyceps cardinalis C033次级代谢产物卵孢菌素的产量为目标,对其产卵孢菌素的培养基进行筛选,并利用单因素和正交试验对深红虫草产卵孢菌素的发酵条件进行了优化。结果表明,深红虫草产卵孢菌素的最适发酵培养基为马铃薯‐蛋白胨‐葡萄糖培养基,最佳发酵参数为:发酵时间6d,培养基初始p H 7.0,接种量6%,培养温度24℃,每500m L锥形瓶装液量100m L,摇瓶转速120r/min。用最佳培养基进行发酵条件优化后获得卵孢菌素448.70μg/m L,产量是优化前的10.14倍。该研究结果为菌株C033在农业害虫防治上的应用奠定了基础。     

Enhancement of glucose oxidase production in batch cultivation of recombinant Saccharomyces cerevisiae: optimization of oxygen transfer condition

AIMS: To obtain an optimal combination of agitation speed and aeration rate for maximization of specific glucose oxidase (GOD) production in recombinant Saccharomyces cerevisiae, and to establish a correlation between kLa vis-à-vis oxygen transfer condition and specific glucose oxidase production. METHODS AND RESULTS: The oxygen transfer condition was manifested indirectly by manipulating the impeller speed and aeration rate in accordance with a Central Composite Rotatory Design (CCRD). The dissolved oxygen concentration and the volumetric oxygen transfer coefficient (kLa) were determined at corresponding combinations of impeller speed and aeration rate. The maximal specific extracellular glucose oxidase production (3.17 U mg-1 dry cell mass) was achieved when the initial dissolved oxygen concentration was 6.83 mg l-1 at the impeller speed of 420 rev min-1 and at the rate of aeration of 0.25 vvm. It was found out that while impeller speed had a direct effect on the production of enzyme, a correlation between kLa and specific GOD production could not be established. CONCLUSION: At the agitation speed of 420 rev min-1 and at 0.25 vvm aeration rate, the degree of turbulence and the dissolved oxygen concentration were thought to be optimal both for cellular growth and production of enzyme. SIGNIFICANCE AND IMPACT OF THE STUDY: The combined effect of agitation and aeration on recombinant glucose oxidase production in batch cultivation has not yet been reported in the literature. Therefore, this study gives an insight into the effect of these two important physical parameters on recombinant protein production. It also suggests that since there is no correlation between kLa and specific production of GOD, kLa should not be used as one of the scale-up parameters.     

果胶酶高产菌种的紫外诱变选育及其培养条件的响应面法优化

以果胶酶产生菌黑曲霉EIM6为出发菌株,初始果胶酶活为14 539 U/mL,经紫外诱变反复处理,摇瓶复筛和遗传稳定性试验,最终获得一株果胶酶高产菌株EIMU2。EIMU2菌株的形态特征发生了明显的改变,相较于原出发菌株EIM6,孢子色泽更黑,孢子团也较出发菌株大,菌丝与孢子上凝结有更多的液珠。复筛后EIMU2酶活为32 161 U/mL,较原出发菌株提高了1.212倍。进一步通过响应面法对EIMU2菌株的液体发酵培养条件进行优化。优化后的培养条件为甜菜渣1.83%,花生饼粉1.69%,(NH_4)_2SO_4 0.5%,K_2HPO_4 0.3%,CaCO_3 0.2%,MgSO_4 0.15%(w/v),接种量6%(v/v),装液量21.36 mL。优化的突变菌株产酶活性进一步提高至98 794.3 U/mL,提高了2.07倍。     

Adaptation of Xanthobacter autotrophicus GJ10 to bromoacetate due to activation and mobilization of the haloacetate dehalogenase gene by insertion element IS1247.

Monobromoacetate (MBA) is toxic for the 1,2-dichloroethane-degrading bacterium Xanthobacter autotrophicus GJ10 at concentrations higher than 5 mM. Mutants which are able to grow on higher concentrations of MBA were isolated and found to overexpress haloacid dehalogenase, which is encoded by the dhlB gene. In mutant GJ10M50, a DNA fragment (designated IS1247) had copied itself from a position on the chromosome that was not linked to the dhlB region to a site immediately upstream of dhlB, resulting in a 1,672-bp insertion. IS1247 was found to encode an open reading frame corresponding to 464 amino acids which showed similarity to putative transposases from two other insertion elements. In most of the other MBA-resistant mutants of GJ10, IS1247 was also present in one more copy than in the wild type, which had two copies located within 20 kb. After insertion to a site proximal to dhlB, IS1247 was able to transpose itself together with the dhlB gene to a plasmid, without the requirement of a second insertion element being present downstream of dhlB. The results show that IS1247 causes bromoacetate resistance by overexpression and mobilization of the haloacid dehalogenase gene, which mimics steps during the evolution of a catabolic transposon and plasmid during adaptation to a toxic growth substrate.     

产弹性蛋白酶菌种的筛选及发酵条件优化研究

从合肥肉联厂附近的土壤和污水中分离得到19株产弹性蛋白酶菌株,初步鉴定该菌株属于假单胞菌属.经过发酵复筛有三株产酶能力超过15u/mL.实验对菌株最佳产酶发酵条件进行了优化2%干酪素、0.5%葡萄糖、0.4%酵母膏、0.2% K2HPO4、0.01% MgSO4·7H2O;起始pH值7.0;最适发酵温度为30℃;装液量为25mL/250mL;该菌株在28h左右产弹性蛋白酶的量达18u/mL.     

Improvement of astaxanthin production by Phaffia rhodozyma through mutation and optimization of culture conditions

Phaffia rhodozyma strains were treated with the mutagenic agent NTG several times and plated onto yeast-malt agar containing β-ionone as a selective medium. One of the NTG-treated strains (NCHU-FS301) produced considerably more astaxanthin than the parent CBS-6938 (strain NCHU-FS301 produced 1515.63 μg/g and CBS-6938 565.08 μg/l). When the kinetic parameters of the specific growth rate (μ) and specific astaxanthin productivity (q_p) were used to judge the association between growth behavior and product formation, NCHU-FS301 was shown to be a more positive growth-associated fermentation type than the parent strain. A study of the effects of the carbon source on red pigment formation revealed that glucose could support the highest total astaxanthin production (7809.3 μg/l). Yeast extract was the best nitrogen source in supporting the highest total astaxanthin formation (8637.5 μg/l). When mixed nitrogen sources were used, a mixture of yeast extract, beef extract, and potassium nitrate (1:1:1) supported more pigmentation (8052.6 μg/l) than the other mixtures tested. Astaxanthin-overproducing mutants could be useful in providing a natural source of astaxanthin for the aquacultural industry.     

布氏白僵菌微菌核的诱导培养及条件优化

菌核是一些丝状菌的休眠结构,具有很强的抗逆性和稳定性。近年来发现有些虫生真菌在特定的营养条件下能形成微菌核(MS)。以适合用于地下害虫防治的布氏白僵菌为对象,研究观察了该菌摇瓶培养微菌核形成的过程,通过单因子实验和部分因子实验确定培养液的碳源A、碳氮比B和接种量C为影响MS产量的显著因子,而装液量和转速是不显著因子;通过最陡爬坡实验和中心组合实验得出MS摇瓶培养参数的最优二次多项式回归模型,确定在A=30.66g/L,B=7.59:1,C=1.03%时,MS产量理论最大值为最高(8.24×103MS/mL),MS实验产量在8.00–8.25×103MS/mL,优化的结果产量比初始试验时的最大值提高21%–25%。研究结果为探索使用布氏白僵菌菌核防治地下害虫奠定了基础。     

Purification and characterization of the tetrachloroethene reductive dehalogenase of strain PCE-S

The membrane-associated tetrachloroethene reductive dehalogenase from the tetrachloroethene-reducing anaerobe, strain PCE-S, was purified 165-fold to apparent homogeneity in the presence of the detergent Triton X-100. The purified dehalogenase catalyzed the reductive dechlorination of tetrachloroethene to trichloroethene and of trichloroethene to cis-1,2-dichloroethene with reduced methyl viologen as the electron donor, showing a specific activity of 650 nkat/mg protein. The apparent K _m values of the enzyme for tetrachloroethene, trichloroethene, and methyl viologen were 10 μM, 4 μM, and 0.3 mM, respectively. SDS-PAGE revealed a single protein band with an apparent molecular mass of 65 kDa. The apparent molecular mass of the native enzyme was 200 kDa as determined by gel filtration. Tetrachloroethene dehalogenase contained 0.7 ± 0.3 mol corrinoid, 1.0 ± 0.3 mol cobalt, 7.8 ± 0.5 mol iron, and 10.3 ± 2.0 mol acid-labile sulfur per mol subunit. The pH optimum was approximately 7.2, and the temperature optimum was approximately 50 °C. The dehalogenase was oxygen-sensitive with a half-life of approximately 50 min. The N-terminal amino acid sequence of the enzyme was determined, and no significant similarity was found to any part of the amino acid sequence of the tetrachloroethene (PCE) reductive dehalogenase from Dehalospirillum multivorans. Received: 4 December 1997 / Accepted: 10 February 1998     

虫草素高产菌株的筛选及不同添加物对虫草素产量的影响研究

通过对14株蛹拟青霉菌株进行摇瓶液体发酵培养试验,筛选虫草素产量最高的蛹虫草菌株,并确定了虫草素的最佳收获期;比较8种营养添加物对虫草发酵过程中虫草素积累的影响,筛选出最佳的营养添加物,以提高液体发酵生产虫草素的产量。结果表明：蛹虫草CM001号菌株的虫草素产量最高,蛹虫草菌在第10天细胞量达到最大值20.44mg/mL,虫草素含量在第13天达到最大值73.81mg/L,70%以上的虫草素分布在发酵液中。其中分别添加腺苷、腺嘌呤、丙氨酸、L-天冬氨酸、甘氨酸5种物质,对虫草素合成的促进作用均较明显,均能有效提高蛹虫草液体发酵虫草素的产量,特别是添加1g/L的腺嘌呤能使10号菌株的虫草素产量提高7.09倍。     

产PCA基因工程菌M18G反复补料分批培养研究

吩嗪-1-羧酸(PCA)是一种广谱、高效的微生物源农药,采用反复补料分批培养工艺可提高PCA合成速率,为实现PCA的商业化生产打下了良好的基础。本试验针对高产PCA的基因工程菌M18G,首先在摇瓶培养条件下,用正交试验法研究了培养基中各主要营养因子葡萄糖、黄豆粉、甘油、95%乙醇等对PCA产量的影响,并确定了适合PCA分泌的最佳培养基(1L)为:葡萄糖6g,黄豆粉40g,甘油6mL,95%乙醇5.9mL;然后确定了反复补料分批培养时更换新鲜培养基的最佳时间为每次培养进行48h后、体积比例为90%。在此条件下,培养进行五个周期后,PCA的合成速率可达到2.27mg/h,是优化后分批培养的1.34倍,同时延长了培养周期,有利于提高设备使用率,降低生产成本。     

Improvement of Photorhabdus temperata strain K122 bioinsecticide production by batch and fed-batch fermentations optimization

Optimization of a fermentation process for bioinsecticides production by Photorhabdus temperata strain K122 was investigated into fully controlled 3-L fermenter using an optimized medium (OM). Development of large-scale inocula showed that the composition of the growth medium greatly influenced the physiological state of P. temperata cells. The effect of pH, agitation and dissolved oxygen concentration (DO) on the growth, culturability and oral toxicity of P. temperata cells were also investigated. Indeed, maintaining the pH at 7 and controlling DO concentration at 50 % saturation throughout the fermentation process, improved biomass production, CFU counts and oral toxicity by 41.1, 35 and 32.1 %, respectively, as compared to cultures carried out in 500 mL shake flasks. At such conditions, 8 g/L glucose fed-batch fermentation, enhanced cell lysis and variants small colony (Vsm) polymorphism appearance. To overcome such limitations, glucose concentration should be maintained at 4 g/L. In this case, P. temperata cells were produced at high cell density and culturability reaching 4.5 and 1.2 × 10⁹ cells/mL, respectively. In addition, the stability of the primary form was maintained for a long period in the stationary growth phase and Vsm polymorphism was completely avoided that can be crucial for scale-up the bioprocess of P. temperata bioinsecticide.