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1.
An investigation of population structure and ecology of the African buffalo (Syncerus caffer Sparrman, 1779) was carried out in the Chebera Churchura National Park, Ethiopia during the wet and dry seasons of 2005–2006. Sample counts of African buffaloes were carried out in an area of 1,215 km2. The estimated population of buffalo was 2,617 individuals. Males comprised 35.0%, while females 52.8% of the population. The remaining 12% of the population was young of both sexes and of all ages of unknown sex. It was difficult to categorize the young into male and female in the field, as their primary sexual characteristics were not easily visible. Male to female sex ratio was 1.00 : 1.51. Age structure was dominated by adults, which constituted 72.06% of the total population. Subadults comprised 22.02%, and young accounted for 5.9% of the population. Larger herds of up to 27 individuals were observed during the wet season and smaller herds of eight individuals during the dry season. The mean herd size during wet and dry seasons was 24.81 and 7.77, respectively. The African buffaloes were distributed in four habitat types such as grasslands, woodlands, montane forests and riverine habitat in the study area. They were observed more in the riverine vegetation types during the dry season. Relative abundance of food resources, green vegetation cover and water availability in the area were the major factors governing their distribution in the present study area. They spent a greater proportion of the time in feeding and resting/ruminating activities. On the average, 49.7% of the daytime was spent in feeding, and 38.75% of the day on resting (lying down and standing). Morning and the late afternoon activity peaks were more pronounced during the dry season than the wet season. 相似文献
2.
The African buffalo ( Syncerus caffer ) is widespread throughout sub-Saharan Africa and is found in most major vegetation types, wherever permanent sources of water are available, making it physically able to disperse through a wide range of habitats. Despite this, the buffalo has been assumed to be strongly philopatric and to form large aggregations that remain within separate home ranges with little interchange between units, but the level of differentiation within the species is unknown. Genetic differences between populations were assessed using mitochondrial DNA (control region) sequence data and analysis of variation at six microsatellite loci among 11 localities in eastern and southern Africa. High levels of genetic variability were found, suggesting that reported severe population bottlenecks due to outbreak of rinderpest during the last century did not strongly reduce the genetic variability within the species. The high level of genetic variation within the species was found to be evenly distributed among populations and only at the continental level were we able to consistently detect significant differentiation, contrasting with the assumed philopatric behaviour of the buffalo. Results of mtDNA and microsatellite data were found to be congruent, disagreeing with the alleged male-biased dispersal. We propose that the observed pattern of the distribution of genetic variation between buffalo populations at the regional level can be caused by fragmentation of a previous panmictic population due to human activity, and at the continental level, reflects an effect of geographical distance between populations. 相似文献
3.
Genetic diversity in nine African buffalo (Syncerus caffer) populations throughout Africa was analysed with 14 microsatellites to study the effects of rinderpest epidemics and habitat fragmentation during the 20th century. A gradient of declining expected heterozygosity was observed among populations in Save Valley Conservancy (Zimbabwe), and northern and southern Kruger National Park (South Africa). This was explained by a high mortality in northern Kruger National Park during the rinderpest pandemic at the end of the 19th century followed by recolonization from neighbouring populations, resulting in intermediate heterozygosity levels in northern Kruger National Park. In other populations expected heterozygosity was very high, indicating that rinderpest and recent habitat fragmentation had a limited effect on genetic diversity. From expected heterozygosity, estimates of long-term effective population size were derived. Migration rates among populations in eastern and southern Africa were very high, as shown by a weak isolation by distance and significant correlation in allele frequencies between populations. However, there were indications that dry habitats could limit migration. Genetic distances within buffalo in central Africa were relatively large, supporting their status as distinct subspecies. Finally, it was observed that the higher polymorphic microsatellites were less sensitive at detecting isolation by distance and differences in Ne, which may be a result of the high mutation pressure at these loci. 相似文献
4.
Begonia dregei and B. homonyma (Begoniaceae), rare plants endemic to coastal forests of eastern South Africa, are two closely related species with high levels of variation among populations in the shape of leaves. Distribution of genetic variation and genetic relatedness were investigated in 12 populations of B. dregei and seven of B. homonyma using polyacrylamide gel electrophoresis. Twelve of the 15 enzyme loci examined were polymorphic, but only seven loci were polymorphic within at least one population. Genetic diversity measures indicated that the among-population gene differentiation represents >90% of the total genetic component in both species considered individually or combined. This indicated restricted gene flow, consistent with the limited dispersal abilities of Begonia generally and the ancient separation of isolated forest patches. Genetic distances among populations are much higher than usually found within species. Allozyme data provide no support for the recognition of B. dregei and B. homonyma as distinct species. 相似文献
5.
The genetic variation and relationships among six Turkish water buffalo populations, typical of different regions, were assessed using a set of 26 heterologous (bovine) microsatellite markers. Between seven and 17 different alleles were identified per microsatellite in a total of 254 alleles. The average number of alleles across all loci in all the analysed populations was found to be 12.57. The expected mean heterozygosity (H e ) per population ranged between 0.5 and 0.58. Significant departures from Hardy–Weinberg equilibrium were observed for 44 locus–population combinations. Population differentiation was analysed by estimation of the F st index (values ranging from 0.053 to 0.123) among populations. A principal component analysis of variation revealed the Merzifon population to show the highest differentiation compared with the others. In addition, some individuals of the Danamandira population appeared clearly separated, while the Afyon, Coskun, Pazar and Thural populations represented a single cluster. The assignment of individuals to their source populations, performed using the Bayesian clustering approach implemented in the structure 2.2 software, supports a high differentiation of Merzifon and Danamandira populations. The results of this study are useful for the development of conservation strategies for the Turkish buffalo. 相似文献
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7.
CHRISTOPHER INGLESFIELD MICHAEL BEGON † 《Biological journal of the Linnean Society. Linnean Society of London》1981,15(3):259-278
The distribution of Drosophila subobscura adults within, and their movement through, open ground habitats has been investigated, along with the status of such individuals within populations as a whole. Movement occurs between open ground and woodland, to some extent as a result of passive transport by air currents, but flies can remain in open ground for at least several days at a time. There are no detectable differences in either the reproductive age-structure or the body-size distributions of flies collected from woodland and open ground habitats, although a significantly higher proportion of females are found in open ground than in woodland. The large number of gravid females in open ground provide the potential for breeding there, but circumstantial evidence suggests that this is unlikely to occur. Rather, their presence appears to reflect the foraging strategy adopted by females in response to their high nutritional requirements. The flux of flies through open ground between woodlands suggests that previous estimates of the genetically-important parameter, effective population size, have been seriously underestimated for natural D. subobscura populations. 相似文献
8.
One of the fundamental questions in animal ecology concerns the activity pattern of animals and the environmental and intrinsic factors that influence such dynamics. This study tested the hypotheses that activity time budgets of the African buffalo appeared to vary by season and times of day and predicted that buffalo would express unequal proportion of time for different activity patterns during the wet and dry seasons in Chebera Churchura National Park (CCNP). An investigation on the diurnal activity budget of the African buffalo was carried out during the wet and dry seasons of 2012–2014 in the Chebera Churchura National Park, Ethiopia, using focal‐animal sampling method. Buffalo spent a greater proportion of the time in feeding and resting/ruminating activities in both the wet and dry seasons. Feeding and resting (lying down and standing) were the predominant activities (87.14% of the diurnal active period), 48.95% time spent feeding during the dry season and 44.91% during the wet season. There was a significant decrease in feeding and an increase in resting from dry seasons to wet seasons. Daytime grazing and resting periods during the wet season were estimated to be 5.39 h and 4.98 h, respectively. Morning and the late afternoon activity peaks were more pronounced during the dry season than the wet season. Therefore, feeding and resting time was influenced by the time of day and the seasons. But there were no significant difference in time allocation for other activities in both the wet and dry seasons. The study has implications for understanding animal activity budget across species, particularly relationships between temperature and season. 相似文献
9.
采用单变量和双变量O-ring函数对太白山大熊猫栖息地巴山冷杉林主要树种的空间分布格局、种间关联性及其与林下开花箭竹的空间关联性进行了多尺度分析.结果表明: 巴山冷杉林中,巴山冷杉数量最多,但种群结构衰退,白桦种群相对年轻,种群结构稳定,红桦种群也呈衰退趋势;3个主要树种在小尺度上呈聚集分布,随尺度增加,逐渐表现为随机分布.3个树种的空间关联性主要表现在小尺度范围内,随尺度增加,空间分布格局逐渐表现为不关联;巴山冷杉和白桦与开花秦岭箭竹在大、中尺度内呈现正相关,而红桦与开花秦岭箭竹在大、中尺度上表现出负相关.大熊猫栖息地内乔木和林下秦岭箭竹共同推动森林的动态演替和发展,进而影响秦岭大熊猫栖息地的环境变化. 相似文献
10.
P. ARENS J. H. WERNKE‐LENTING T. DIEK
TTER C. ROTHENBÜHLER M. SPEELMANS F. HENDRICKX M. J. M. SMULDERS 《Molecular ecology resources》2005,5(2):413-415
Twelve novel polymorphic microsatellite loci are presented for the dark bush cricket, Pholidoptera griseoaptera. All loci are polymorphic, with up to 37 alleles per locus. These microsatellites will be useful tools for studying the influence of landscape structure and land use intensity in agricultural landscapes on genetic diversity within and among populations of P. griseoaptera. 相似文献
11.
Bathymetric barriers promoting genetic structure in the deepwater demersal fish tusk (Brosme brosme)
HALVOR KNUTSEN PER ERIK JORDE† HANNE SANNÆS A. RUS HOELZEL‡ ODD AKSEL BERGSTAD SERGIO STEFANNI§ TORILD JOHANSEN¶ NILS CHR. STENSETH† 《Molecular ecology》2009,18(15):3151-3162
Population structuring in the North Atlantic deepwater demersal fish tusk ( Brosme brosme ) was studied with microsatellite DNA analyses. Screening eight samples from across the range of the species for seven loci revealed low but significant genetic heterogeneity ( F ST = 0.0014). Spatial genetic variability was only weakly related to geographical (Euclidean) distance between study sites or separation of study sites along the path of major ocean currents. Instead, we found a significant effect of habitat, indicated by significant differentiation between relatively closely spaced sites: Rockall, which is surrounded by very deep water (>1000 m), and the Mid-Atlantic Ridge, which is separated from the European slope by a deep ocean basin, were differentiated from relatively homogeneous sites across the Nordic Seas. Limited adult migration across bathymetric barriers in combination with limited intersite exchange of pelagic eggs and larvae due to site-specific circulatory retention or poor survival during drift phases across deep basins may be reducing gene flow. We regard these limitations to gene flow as the most likely mechanisms for the observed population structure in this demersal species. The results underscore the importance of habitat boundaries in marine species. 相似文献
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13.
Kohji Hirano 《Population Ecology》1995,37(2):185-195
Temporal changes in the population size of a phytophagous lady-beetle were analyzed to identify mechanisms affecting lady-beetle population dynamics at different spatial scales. The study area (15 ha) included 18 habitat patches. The major host plants were potato for first generation larvae and eggplant for second generation larvae. The habitat patches were classified into three groups according to the major host plants in each patch: P-E patches (both host plants available), P patches (potato only), and E patches (eggplant only). The winter disappearance of adults in the whole study area, and larval mortality in E patches were apparently the most important factors disturbing the overall population density. Density-dependent movement of females appeared to have the greatest stabilizing effect on the yearly fluctuation of population density. Rate of increase of female adults from the first to the second generation,R, was generally higher on eggplants in E patches than in P-E patches because the adult density of the first generation was much higher in P-E patches. The yearly fluctuation of adult density in each generation tended to be less in patches with all habitat components necessary for the full life cycle (P-E patches). However, such patches were not favorable for first generation females, as indicated by the lower rate of increase from the first to the second generation. The density and stability of lady-beetle populations is discussed in relation to habitat structure. 相似文献
14.
Habitat fragmentation is known to cause genetic differentiation between small populations of rare species and decrease genetic variation within such populations. However, common species with recently fragmented populations have rarely been studied in this context. We investigated genetic variation and its relationship to population size and geographical isolation of populations of the common plant species, Lychnis flos-cuculi L., in fragmented fen grasslands. We analysed 467 plants from 28 L. flos-cuculi populations of different sizes (60 000-54 000 flowering individuals) in northeastern Switzerland using seven polymorphic microsatellite loci. Genetic differentiation between populations is small (F(ST) = 0.022; amova; P < 0.001), suggesting that gene flow among populations is still high or that habitat fragmentation is too recent to result in pronounced differentiation. Observed heterozygosity (H(O) = 0.44) significantly deviates from Hardy-Weinberg equilibrium, and within-population inbreeding coefficient F(IS) is high (0.30-0.59), indicating a mixed mating breeding system with substantial inbreeding in L. flos-cuculi. Gene diversity is the only measure of genetic variation which decreased with decreasing population size (R = 0.42; P < 0.05). While our results do not indicate pronounced effects of habitat fragmentation on genetic variation in the still common L. flos-cuculi, the lower gene diversity of smaller populations suggests that the species is not entirely unaffected. 相似文献
15.
应用“相邻格子法”对浙江古田山国家自然保护区的甜槠种群进行调查 ,将 2 5个样地分为不同演替阶段和不同生境的森林群落两大类型。对甜槠种群结构和动态进行分析 ,绘制甜槠种群大小结构图和存活曲线 ;并用泊松方差 /均值比率等 5个聚集度指标测定其种群分布格局。结果显示 :马尾松林→马尾松针阔叶混交林→次生常绿阔叶林→成熟山坡常绿阔叶林的演替过程中 ,马尾松林中甜槠个体极少 ,针阔叶混交林中种群结构为增长型 ;次生和成熟常绿阔叶林中其种群结构都比较稳定 ,但从群落外貌和结构仍可看出前者的次生性。不同生境的群落包括成熟沟谷常绿阔叶林、成熟山坡常绿阔叶林、黄山松林和黄山松针阔叶混交林 ,甜槠由沟谷地带的零星个体变为山坡上的稳定型种群 ,中山地带的黄山松林和黄山松针阔叶混交林中甜槠种群呈增长型 ,但不会取代黄山松的优势地位。种群空间格局大都为集群分布 ,并符合负二项式分布 ,仅两个次生群落的甜槠种群因缺 、 、 级幼苗而呈随机分布。此外 ,对成熟常绿阔叶林中不同大小级个体分布格局动态的研究表明 :甜槠在幼苗、幼树时为集群分布 ,随着甜槠个体进一步增大 ,其分布格局由集群分布变为随机分布。甜槠以其较强的更新能力 ,成为本区低海拔成熟常绿阔叶林中十分稳定的优势种 相似文献
16.
Concentrations of K and Na were determined in erythrocytes from wildebeest and African buffalo resident in Tanzania. The object was to determine if these species possess the HK/LK polymorphism which is typical of other bovid species, but not of other mammals. The polymorphism is characterized by individuals that are either of the HK phenotype (high K and low Na concentrations in red cells) or LK phenotype (low K and high Na concentrations in red cells). Wildebeest were shown to be polymorphic, with the distribution of phenotypes resembling that in domestic cattle. By contrast the polymorphism was not found in the African buffalo; all 59 individuals examined exhibited the HK phenotype. This was unexpected, since the polymorphism has been observed in five divergent bovid species, including two species (water buffalo and domestic cow) that are closely related to the African buffalo, and classified in the same subfamily (Bovinae). The most parsimonious interpretation of this pattern is that the trait was lost from the African buffalo after species in the Bovinae diverged. The biological significance of the HK/LK polymorphism, and reasons for its presence or absence among species in the Bovidae, remain obscure. 相似文献
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18.
Data from three published studies of genetic variation at 18 microsatellite loci in water buffalo populations in China (18 swamp type, two river type), Nepal (one wild, one domestic river, one hybrid) and south-east Asia (eight swamp, three river) were combined so as to gain a broader understanding of genetic relationships among the populations and their demographic history. Mean numbers of alleles and expected heterozygosities were significantly different among populations. Estimates of θ (a measure of population differentiation) were significant among the swamp populations for all loci and among the river populations for most loci. Differentiation among the Chinese swamp populations (which was due primarily to just one population) was much less than among the south-east Asian. The Nepal wild animals, phenotypically swamp type but genetically like river type, are significantly different from all the domestic river populations and presumably represent the ancestral Bubalus arnee (possibly with some river-type introgression). Relationships among the swamp populations (D(A) genetic distances, principal component analysis and structure analyses) show the south-east Asian populations separated into two groups by the Chinese populations. Given these relationships and the patterns of genetic variability, we postulate that the swamp buffalo was domesticated in the region of the far south of China, northern Thailand and Indochina. Following domestication, it spread south through peninsular Malaysia to Sumatra, Java and Sulawesi, and north through China, and then to Taiwan, the Philippines and Borneo. 相似文献
19.
Aurélie Khimoun Cyril Eraud Anthony Ollivier Emilie Arnoux Vincent Rocheteau Marine Bely Emilie Lefol Martin Delpuech Marie‐Laure Carpentier Gilles Leblond Anthony Levesque Anaïs Charbonnel Bruno Faivre Stéphane Garnier 《Molecular ecology》2016,25(16):3831-3844
Habitat fragmentation is one of the most severe threats to biodiversity as it may lead to changes in population genetic structure, with ultimate modifications of species evolutionary potential and local extinctions. Nonetheless, fragmentation does not equally affect all species and identifying which ecological traits are related to species sensitivity to habitat fragmentation could help prioritization of conservation efforts. Despite the theoretical link between species ecology and extinction proneness, comparative studies explicitly testing the hypothesis that particular ecological traits underlies species‐specific population structure are rare. Here, we used a comparative approach on eight bird species, co‐occurring across the same fragmented landscape. For each species, we quantified relative levels of forest specialization and genetic differentiation among populations. To test the link between forest specialization and susceptibility to forest fragmentation, we assessed species responses to fragmentation by comparing levels of genetic differentiation between continuous and fragmented forest landscapes. Our results revealed a significant and substantial population structure at a very small spatial scale for mobile organisms such as birds. More importantly, we found that specialist species are more affected by forest fragmentation than generalist ones. Finally, our results suggest that even a simple habitat specialization index can be a satisfying predictor of genetic and demographic consequences of habitat fragmentation, providing a reliable practical and quantitative tool for conservation biology. 相似文献
20.
Microsatellite variation from eight loci was studied in five populations of Drosophila teissieri, a fruit-fly found only in the rain forests of sub-Saharan Africa. Five noncontiguous rain forest sites (from Tanzania, Gabon and Ivory Coast) were sampled to measure the effects of historical forest fragmentation on population structure in an obligatory forest-dwelling species. The Ivory Coast and Gabon populations showed a wider range of alleles, different modal alleles and had a higher genetic diversity than the three East African populations. As could be expected, genetic differentiation (FST) was significantly correlated with physical distance, but the westernmost population (Ivory Coast) showed values that were intermediate between the central (Gabon) and Eastern (Tanzania) populations. A migration-drift equilibrium in a stable continuum of populations did not appear adequate to describe the observed distribution. It seems probable that the species has undergone abrupt changes involving isolation, merging and migration of populations, as a consequence of repeated waves of forest fragmentation and coalescence. 相似文献