Bio-functional legumes with nutraceutical, pharmaceutical, and industrial uses

To help or prevent certain health problems and adequately feed people, there is a need for added contributions from legumes. Legumes produce primary and secondary metabolites and other phytochemicals such as nutraceuticals, pharmaceuticals, pesticides, and industrial products. In addition, legumes such as hyacinth bean seed contain nearly 10% more fiber while winged bean contains three times more fiber than common bean. The potential breast cancer fighting chemical known as kievitone is found in hyacinth bean but not in common bean nor soybean. Both agmatine and isovitexin are potential combatants of microbial organisms in mammals including humans. Agmatine and isovitexin are not found in soybean nor common bean, however they exist in winged bean. Studies regarding value added traits such as the bio-functional and biologically active components of legumes have only recently begun because most specialty phytochemicals are extracted from other plant sources. Not only can bio-functional legumes provide healthy food constituents for use as nutraceuticals, pharmaceuticals, and pesticidals, but they can increase healthy food resources worldwide. Bio-functional legumes have been used in the past primarily for forage, pasture, minor food, green manuring, and erosion control. Current uses include these previously mentioned plus some fairly new ones such as hyacinth bean used as an ornamental and wildlife food. The future for these common bean relatives is for use in the health markets as new medicines or nutraceuticals and to provide farmers with additional crop production as phytopharmaceutical or nutraceutical crops.     

Unique and conserved features of floral evocation in legumes

Legumes, with their unique ability to fix atmospheric nitrogen, play a vital role in ensuring future food security and mitigating the effects of climate change because they use less fossil energy and produce less greenhouse gases compared with N-fertilized systems. Grain legumes are second only to cereal crops as a source of human and animal food, and they contribute approximately one third of the protein consumed by the human population. The productivity of seed crops, such as grain legumes, is dependent on flowering. Despite the genetic variation and importance of flowering in legume production, studies of the molecular pathways that control flowering in legumes are limited.Recent advances in genomics have revealed that legume flowering pathways are divergent from those of such model species as Arabidopsis thaliana. Here, we discuss the current understanding of flowering time regulation in legumes and highlight the unique and conserved features of floral evocation in legumes.     

Lepidopteran pests in the Upper Volga area (Lepidoptera)

Data on 154 species of lepidopteran pests in the Upper Volga region, of which 9 are considered as principal, 29 as minor, and 116 as potential pests are summarized. Most of harmful species belong to the families Tortricidae (27), Noctuidae (24), Gelechiidae (11), Gracillariidae (9), Geometridae (8), and Lymantriidae (6). The pests of forest trees and shrubs are most numerous, followed by the pests of fruit trees and berry shrubs, pests of ornamental trees and shrubs, etc. There is no lepidopteran pest of field and forage crops in the region. On the whole, the economic importance of Lepidoptera in the Upper Volga region is lower than that of the other insect orders.     

Fertilizers and biological nitrogen fixation as sources of plant nutrients: Perspectives for future agriculture

Biological nitrogen fixation (BNF) has an assured place in agriculture, mainly as a source of nitrogen for legumes. Legumes are currently grown mostly as a source of vegetable oil and as food for humans and animals, but not as nitrogen source.Other crops with BNF capability may be eventually be developed eventually. Such crops will also need mineral fertilizers to maintain a good status of soil nutrients, but their possible effects to the environment is also a concern. Fertilizers, however, will remain a necessary and sustainable input to agriculture to feed the present and increasing human population. It is not a case of whether BNF is better or worse than mineral fertilizers because both plays an important role in agriculture.     

Recent Progress in Development of Tnt1 Functional Genomics Platform for Medicago truncatula and Lotus japonicus in Bulgaria

Legumes, as protein-rich crops, are widely used for human food, animal feed and vegetable oil production. Over the past decade, two legume species, Medicago truncatula and Lotus japonicus, have been adopted as model legumes for genomics and physiological studies. The tobacco transposable element, Tnt1, is a powerful tool for insertional mutagenesis and gene inactivation in plants. A large collection of Tnt1-tagged lines of M. truncatula cv. Jemalong was generated during the course of the project 'GLIP': Grain Legumes Integrated Project, funded by the European Union (www.eugrainlegumes.org). In the project 'IFCOSMO': Integrated Functional and COmparative genomics Studies on the MOdel Legumes Medicago truncatula and Lotus japonicus, supported by a grant from the Ministry of Education, Youth and Science, Bulgaria, these lines are used for development of functional genomics platform of legumes in Bulgaria. This review presents recent advances in the evaluation of the M. truncatula Tnt1 mutant collection and outlines the steps that are taken in using the Tnt1-tagging for generation of a mutant collection of the second model legume L. japonicus. Both collections will provide a number of legume-specific mutants and serve as a resource for functional and comparative genomics research on legumes. Genomics technologies are expected to advance genetics and breeding of important legume crops (pea, faba bean, alfalfa and clover) in Bulgaria and worldwide.     

Legumes can increase cadmium contamination in neighboring crops

Legumes are widely used in many cropping systems because they share their nitrogen fixation products and phosphorus mobilization activities with their neighbors. In the current study, however, we showed that co-cultivation with legumes increased cadmium (Cd) contamination in the adjacent crops. Both field and mesocosm experiments indicated that legumes increased Cd levels in edible parts and shoots of four neighboring crops and five maize varieties tested, regardless of the Cd levels in the soil. This enhanced Cd accumulation in crops was attributed to root interactions that alter the rhizosphere environment. Co-cultivation with legumes reduced soil pH, which somewhat increased the exchangeable forms of Cd. Our results have demonstrated the inevitable increases in Cd levels of crops as a direct result of co-cultivation with legumes even under situations when these levels are below the permissible threshold. With this new revelation, we need to consider carefully the current cropping systems involving legumes and perhaps to re-design the current and future cropping systems in view of avoiding food contamination by Cd.     

Gene pools in grain legumes

The range of genetic resources available for the improvement of grain legumes varies greatly in both its extent and accessibility. This can be related to the biosystematic relationships and the geographic dispersion of the crops together with the evolutionary age of the taxa from which they arose and related taxa. Harlan and de Wet’s gene pool system can usefully be applied to the legumes. Primary gene pools are often extensive, secondary gene pools are usually restricted or non-existent. Tertiary gene pools, though extensive, would require development of completely new techniques for exploitation.     

Nodulation of legumes from the Thar desert of India and molecular characterization of their rhizobia

Aims

To survey the occurrence of nodulated legumes in the arid and semi-arid areas of Western Rajasthan and to characterize their associated symbiotic bacteria.

Methods

Herbaceous annual species were excavated whole, while tree species were studied as seedlings in the field or as trap plants in pot experiments. Nodules were examined by microscopy to confirm their effectiveness and to determine their internal structure. Bacteria isolated from the nodules were authenticated on their original hosts and were identified on the basis of 16S rRNA sequencing. Phylogenetic trees were inferred using the neighbour-joining method.

Results

We studied 35 of more than 50 species of native legume reported from these areas. Legumes are drought escaping (annual species), drought tolerant perennials or trees possessing deep root systems and other adaptations to arid conditions. Nodulation was recorded in all members of the Papilionoideae and Mimosoideae, but only one species of Caesalpinioideae. Internal structure of nodules varied within these groups, especially with respect to the presence or absence of uninfected cells in the infected region. Full 16S rRNA gene sequencing revealed that the nodules harboured a range of nodulating bacteria belonging to the genera Sinorhizobium, Rhizobium and Bradyrhizobium, within which they formed separate sub clades.

Conclusions

This study extends the range of legumes known to grow and nodulate in semi-arid regions, and provides information about their endosymbionts.     

Nonlegumes, legumes, and root nodules harbor different arbuscular mycorrhizal fungal communities

Legumes are an important plant functional group since they can form a tripartite symbiosis with nitrogen-fixing Rhizobium bacteria and phosphorus-acquiring arbuscular mycorrhizal fungi (AMF). However, not much is known about AMF community composition in legumes and their root nodules. In this study, we analyzed the AMF community composition in the roots of three nonlegumes and in the roots and root nodules of three legumes growing in a natural dune grassland. We amplified a portion of the small-subunit ribosomal DNA and analyzed it by using restriction fragment length polymorphism and direct sequencing. We found differences in AMF communities between legumes and nonlegumes and between legume roots and root nodules. Different plant species also contained different AMF communities, with different AMF diversity. One AMF sequence type was much more abundant in legumes than in nonlegumes (39 and 13%, respectively). Root nodules contained characteristic AMF communities that were different from those in legume roots, even though the communities were similar in nodules from different legume species. One AMF sequence type was found almost exclusively in root nodules. Legumes and root nodules have relatively high nitrogen concentrations and high phosphorus demands. Accordingly, the presence of legume- and nodule-related AMF can be explained by the specific nutritional requirements of legumes or by host-specific interactions among legumes, root nodules, and AMF. In summary, we found that AMF communities vary between plant functional groups (legumes and nonlegumes), between plant species, and between parts of a root system (roots and root nodules).     

Advances in breeding and biotechnology of legume crops

Legume crops are relevant globally to the feeding and the nutrition of humans and animals because of their relatively high seed content of protein and essential amino acids. Additionally, they are related to sustainable agriculture, considering their ability to associate with atmospheric nitrogen fixing bacteria (Rhizobia). Despite this, several technical constraints of legumes crops have maintained their worldwide production far behind from cereals. This review article focuses in current information about recent advances in breeding and biotechnology of the major leguminous crops. Conventional breeding has mainly focused in improving multiple vegetative and reproductive traits that have associated to distinct heritability values, which reflects how amenable each character is for genetic improvement. Legumes have strongly entered into the genomics era through the complete genome sequencing of several species in the last decade. Moreover, a wealth of tools and techniques of Fabaceae genomics are now available and discussed throughout this article. In addition, there is an increasing amount of quantitative trait loci, candidate genes, and genes associated to abiotic and biotic resistance and to agronomic traits that have been reported, which will potentially allow more rapid progress of legume genetic improvement. Two successful examples of genetically modified legume crops are examined in this paper: glyphosate-resistant transgenic soybean and transgenic common bean resistant to Bean golden mosaic virus. Finally, legumes genomics and breeding programs, using classical breeding methods, marker-assisted selection, and biotechnological tools face a promising momentum for further application of technology and information that could boost their global production.     

Is genetic engineering ever going to take off in forage,turf and bioenergy crop breeding?

Background

Genetic engineering offers the opportunity to generate unique genetic variation that is either absent in the sexually compatible gene pool or has very low heritability. The generation of transgenic plants, coupled with breeding, has led to the production of widely used transgenic cultivars in several major cash crops, such as maize, soybean, cotton and canola. The process for regulatory approval of genetically engineered crops is slow and subject to extensive political interference. The situation in forage grasses and legumes is more complicated.

Scope

Most widely grown forage, turf and bioenergy species (e.g. tall fescue, perennial ryegrass, switchgrass, alfalfa, white clover) are highly self-incompatible and outcrossing. Compared with inbreeding species, they have a high potential to pass their genes to adjacent plants. A major biosafety concern in these species is pollen-mediated transgene flow. Because human consumption is indirect, risk assessment of transgenic forage, turf and bioenergy species has focused on their environmental or ecological impacts. Although significant progress has been made in genetic modification of these species, commercialization of transgenic cultivars is very limited because of the stringent and costly regulatory requirements. To date, the only transgenic forage crop deregulated in the US is ‘Roundup Ready’ (RR) alfalfa. The approval process for RR alfalfa was complicated, involving several rounds of regulation, deregulation and re-regulation. Nevertheless, commercialization of RR alfalfa is an important step forward in regulatory approval of a perennial outcrossing forage crop. As additional transgenic forage, turf and bioenergy crops are generated and tested, different strategies have been developed to meet regulatory requirements. Recent progress in risk assessment and deregulation of transgenic forage and turf species is summarized and discussed.     

Nonlegumes, Legumes, and Root Nodules Harbor Different Arbuscular Mycorrhizal Fungal Communities

Legumes are an important plant functional group since they can form a tripartite symbiosis with nitrogen-fixing Rhizobium bacteria and phosphorus-acquiring arbuscular mycorrhizal fungi (AMF). However, not much is known about AMF community composition in legumes and their root nodules. In this study, we analyzed the AMF community composition in the roots of three nonlegumes and in the roots and root nodules of three legumes growing in a natural dune grassland. We amplified a portion of the small-subunit ribosomal DNA and analyzed it by using restriction fragment length polymorphism and direct sequencing. We found differences in AMF communities between legumes and nonlegumes and between legume roots and root nodules. Different plant species also contained different AMF communities, with different AMF diversity. One AMF sequence type was much more abundant in legumes than in nonlegumes (39 and 13%, respectively). Root nodules contained characteristic AMF communities that were different from those in legume roots, even though the communities were similar in nodules from different legume species. One AMF sequence type was found almost exclusively in root nodules. Legumes and root nodules have relatively high nitrogen concentrations and high phosphorus demands. Accordingly, the presence of legume- and nodule-related AMF can be explained by the specific nutritional requirements of legumes or by host-specific interactions among legumes, root nodules, and AMF. In summary, we found that AMF communities vary between plant functional groups (legumes and nonlegumes), between plant species, and between parts of a root system (roots and root nodules).     

Insertional mutagenesis: a Swiss Army knife for functional genomics of Medicago truncatula

Legumes are second only to grasses in worldwide economic importance, and understanding their molecular genetics is vital to the breeding of important grain and forage legumes. Over the past decade, Medicago truncatula has been selected as a model plant in which to study biological processes that are unique and pertinent to legumes, and that cannot easily be studied in Arabidopsis. Here, we discuss the most common tools for introducing and analyzing genetic mutations in M. truncatula. Because transformation and regeneration are still bottlenecks in studying a legume species, large-scale insertional mutagenesis poses a major challenge in M. truncatula. We discuss the tobacco retrotransposon Tnt1 as a viable and attractive option for introducing multiple independent insertions per plant for saturation mutagenesis.     

Invasive trees and shrubs: where do they come from and what we should expect in the future?

The global database of invasive trees and shrubs has been updated, resulting in a total of 751 species (434 trees and 317 shrubs) from 90 families (Rejmánek and Richardson 2013 Divers Distrib 19:1093–1094). This database is used to assess major trends in human-assisted exchanges of dendrofloras among 15 major geographical regions. Areas most invaded by non-native trees are Pacific Islands (136 species), Southern Africa (118), Australia (116), and North America (114). Areas most invaded by non-native shrubs are North America (98), Australia (87), Pacific Islands (71), and Europe (61). The most important sources of invasive trees are Asia (122–146 species, depending on how many Eurasian species are considered to have been introduced only from Europe), Australia (81), and South America (81). The most important sources of invasive shrubs are Asia (103–118), Europe (68), and South America (54). Mean number of native geographical regions for invasive trees is 1.64, while the mean number of invaded regions by trees is 2.51. The difference is smaller for shrubs: 1.60 versus 2.11. Asia is the major source of invasive Rosaceae shrubs, as well as invasive Arecaceae and Oleaceae species. South America and Australia are major sources of invasive Fabaceae trees. North America and Europe are major sources of invasive Pinaceae. Most of the invasive Salicaceae are of Eurasian origin. The identified trends will very likely continue in this century. Because of increasing interactions with many states in Asia, even more invasive woody species will be introduced from this part of the world.     

Broadening the Genetic Base of Soybean: A Multidisciplinary Approach

Soybean [Glycine max (L.) Merr.] is an economically important legume with 2n = 40 chromosomes, whose seeds contain an average of 40% protein and 20% oil, and its plants enrich the soil by fixing nitrogen in symbiosis with nitrogen-fixing bacteria. World soybean production has doubled in the past twenty years to over 220 million metric tons in 2006; the producing countries are U.S.A., Brazil, Argentina, China, and India. Soybean was domesticated in East Asia from its wild annual progenitor G. soja Sieb. & Zucc. (2n = 40). There are 26 wild perennial species, indigenous to Australia, of the subgenus Glycine but a common progenitor with 2n = 20 chromosomes has not been identified, and it may be extinct. It has been demonstrated that Glycine species are of either of allo-or auto-tetraploid origin. The cytogenetic knowledge of soybean lags far behind that of other model important crops (rice, maize, wheat, tomato), because it's somatic chromosomes are symmetrical, and only one pair of satellite chromosomes can be identified. Pachytene chromosome analysis created a chromosome map that has laid the foundation for producing primary trisomics. Several molecular linkage maps have been developed, but only 11 of the 20 molecular linkage groups (MLGs) have been associated with specific chromosomes. The genetic base of modern soybean cultivars is narrow and soybean breeders are confined to crossing within the primary gene pool (GP-1). Soybean does not have secondary gene pool (GP-2). Exploitation of the tertiary and quaternary gene pools (GP-3, GP-4) has been attempted but ended at the amphidiploid stage. A methodology for producing fertile lines derived from G. max and G. tomentella (2n = 78) cross has been developed, thereby making introgression of useful genes from GP-3. Genetic transformation has produced Roundup Ready® Soybeans, resistant to glyphosate herbicide.     

Phosphorus pools and other soil properties in the rhizosphere of wheat and legumes growing in three soils in monoculture or as a mixture of wheat and legume

Background and aims

Phosphorus and nitrogen availability and forms are affected by soil properties as well as by plant species and further modulated by soil microbes. Additionally, close contact of the roots of two plant species may affect concentrations and forms of N and P. The aim of this study was to assess properties related to N and P cycling in the rhizosphere of wheat and legumes grown in monoculture or in wheat/legume mixtures in three soils differing in pH.

Methods

Faba bean, white lupin and wheat were grown in three soils differing in pH (4.8, 7.5 and 8.8) in monoculture or in mixed culture of wheat and legumes. Rhizosphere soil was collected at flowering and analyzed for P pools by sequential fractionation, available N as well as community structure of bacteria, fungi, ammonia oxidizers, N₂-fixers and P mobilizers by polymerase chain reaction (PCR)—denaturing gradient gel electrophoresis (DGGE).

Results

Soil type was the major factor determining plant growth, rhizosphere nutrient dynamics and microbial community structure. Among the crop species, only faba bean had a significant effect on nitrification potential activity (PNA) in all three soils with lower activity compared to the unplanted soil. Soil type and plant spieces affected the community composition of ammonia-oxidizing archaea (AOB), ammonia-oxidizing archaea (AOA), N₂-fixers (nifH), P mobilizers (ALP gene) and fungi, but not that of bacteria. Among the microbial groups, the AOA and nifH community composition were most strongly affected by crop species, cropping system and soil type, suggesting that these groups are quite sensitive to environmental conditions. All plants depleted some labile as well as non-labile P pools whereas the less labile organic P pools (NaOH extractable P pools, acid extractable P pools) accumulated in the rhizosphere of legumes. The pattern of depletion and accumulation of some P pools differed between monoculture and mixed culture as well as among soils.

Conclusions

Plant growth and rhizosphere properties were mainly affected by soil type, but also by crop species whereas cropping system had the least effect. Wheat and the legumes depleted less labile inorganic P pools in some soils whereas less labile organic P pools (NaOH extractable P, acid extractable P) accumulated in the rhizosphere of legumes.     

鼎湖山自然林豆科固氮植物资源的调查研究

本文在调查鼎湖山自然林木本豆科植物结瘤固氮的基础上,参阅了国内外有关豆科植物结瘤固氮的主要文献,研究了鼎湖山自然林木本豆科植物的固氮资源。结果得出鼎湖山自然林中常见的木本豆科植物共有41种,其中乔木15种,灌木6种,木质藤本20种;有结瘤固氮特性的26种,其中乔木11种,灌木5种,木质藤本10种;经初步调查未见根瘤的6种,其中乔木2种,灌木1种,木质藤本3种;未调查的9种,其中乔木2种,木质藤本7种。本研究结果为鼎湖山木本豆科固氮植物资源的保护、管理和开发利用提供了科学论据,在理论和应用方面均有重要意义。     

Legume biofortification is an underexploited strategy for combatting hidden hunger

Legumes are the world's primary source of dietary protein and are particularly important for those in developing economies. However, the biofortification potential of legumes remains underexploited. Legumes offer a diversity of micronutrients and amino acids, exceeding or complementing the profiles of cereals. As such, the enhancement of legume nutritional composition presents an appealing target for addressing the “hidden hunger” of global micronutrient malnutrition. Affecting ~2 billion people, micronutrient malnutrition causes severe health effects ranging from stunted growth to reduced lifespan. An increased availability of micronutrient‐enriched legumes, particularly to those in socio‐economically deprived areas, would serve the dual functions of ameliorating hidden hunger and increasing the positive health effects associated with legumes. Here, we give an updated overview of breeding approaches for the nutritional improvement of legumes, and crucially, we highlight the importance of considering nutritional improvement in a wider ecological context. Specifically, we review the potential of the legume microbiome for agronomic trait improvement and highlight the need for increased genetic, biochemical, and environmental data resources. Finally, we state that such resources should be complemented by an international and multidisciplinary initiative that will drive crop improvement and, most importantly, ensure that research outcomes benefit those who need them most.     

Crop Residue Removal for Bioenergy Reduces Soil Carbon Pools: How Can We Offset Carbon Losses?

Crop residue removal for bioenergy can deplete soil organic carbon (SOC) pools. Management strategies to counteract the adverse effects of residue removal on SOC pools have not been, however, widely discussed. This paper reviews potential practices that can be used to offset the SOC lost with residue removal. Literature indicates that practices including no-till cover crops, manure and compost application, and return of biofuel co-products increase SOC pools and may thus be used to offset some SOC loss. No-till rotations that include semi-perennial grasses or legumes also offer a promise to promote soil-profile C sequestration and improve soil resilience after residue removal. No-till cover crops can sequester between 0.10 and 1 Mg ha^?1 per year of SOC relative to no-till without cover crops, depending on cover crop species, soil type, and precipitation input. Animal manure and compost contain about 15 % of C and thus their addition to soil can enhance SOC pools and boost soil biological activity. Similarly, application of biofuel co-products such as biochar, which contain between 45 % and 85 % of C depending on the feedstock source and processing method, can enhance long-term C sequestration. These mitigation strategies may maintain SOC pools under partial residue removal in no-till soils but are unlikely to replace all the SOC lost if residue is removed at excessive rates. More field research and modeling efforts are needed to assess the magnitude at which the different mitigation strategies can overcome SOC loss with crop residue removal.