Genetic and morphological variation in a Mediterranean glacial refugium: evidence from Italian pygmy shrews,Sorex minutus (Mammalia: Soricomorpha)

At the Last Glacial Maximum (LGM), the southern European peninsulas were important refugia for temperate species. Current genetic subdivision of species within these peninsulas may reflect past population subdivision at the LGM, as in ‘refugia within refugia’, and/or at other time periods. In the present study, we assess whether pygmy shrew populations from different regions within Italy are genetically and morphologically distinct. One maternally and two paternally inherited molecular markers (cytochrome b and Y‐chromosome introns, respectively) were analysed using several phylogenetic methods. A geometric morphometric analysis was performed on mandibles to evaluate size and shape variability between populations. Mandible shape was also explored with a functional approach that considered the mandible as a first‐order lever affecting bite force. We found genetically and morphologically distinct European, Italian, and southern Italian groups. Mandible size increased with decreasing latitude and southern Italian pygmy shrews exhibited mandibles with the strongest bite force. It is not clear whether or not the southern Italian and Italian groups of pygmy shrews occupied different refugia within the Italian peninsula at the LGM. It is likely, however, that geographic isolation earlier than the LGM on islands at the site of present‐day Calabria was important in generating the distinctive southern Italian group of pygmy shrews, and also the genetic groups in other small vertebrates that we review here. Calabria is an important hotspot for genetic diversity, and is worthy of conservation attention. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 100 , 774–787.     

A new elephant fossil from the late Pleistocene of Alghero: The puzzling question of Sardinian dwarf elephants

Endemic elephants, variously reduced in size, have been reported from a number of Mediterranean islands. Most of these originated from the mainland species Palaeoloxodon antiquus. A few dwarf mammoth remains are recorded from Crete and Sardinia. In Sardinia, a largely incomplete skeleton and a few mammoth teeth have been reported from localities believed to range in age from the late middle to the late Pleistocene. The chronology of colonisation by the ancestral species, the actual persistence through time of Mammuthus lamarmorai on the island, and the morphological and dimensional range of the species are, however, poorly known. This research aims to describe a distal portion of a left tibia of a dwarf elephant found in the Alghero area (NW Sardinia), showing some morphological traits and dimensions consistent with those of the endemic Sardinian mammoth (Mammuthus lamarmorai). The main unanswered questions about chronology, colonisation and population dynamics of endemic Sardinian elephants are highlighted and briefly discussed.     

Status of the so-called African pygmy elephant (Loxodonta pumilio (NOACK 1906)): phylogeny of cytochrome b and mitochondrial control region sequences

Among the African elephants, it has been unanimously acknowledged that the forest elephants (cyclotis form) are peculiar, so that they have been elevated to the specific rank. The development of molecular analyses of extant Loxodonta has only focused on two forms yet: the savannah form (africana) and the forest form (cyclotis), disregarding the so-called pygmy elephants (pumilio or fransseni) the systematic status of which has been debated since their discovery. Therefore, we have sampled nine dwarfed-labelled specimens in collection and eight specimens of typical forest elephants that we compared to three savannah elephants and two Asian elephants. Because of the degraded nature of the nuclear DNA content in bone samples of old specimens, we assayed mitochondrial markers; 1961 bp of the mitochondrial genome were sequenced (over a continuous range spanning the cytochrome b gene, tRNA Thr, tRNA Pro, hypervariable region 1 and central conserved region of the control region). Pumilio and cyclotis are not sister-taxa: the phylogenetic analyses rather account for the inclusion of the so-called pygmy elephants within a monophyletic group of forest elephants sensu lato. The internal structure of this clade reveals to depend on isolation and remoteness between populations, characteristics that may have been extensively influenced by climatic variations during the Quaternary period. We conclude that the specific taxon Loxodonta pumilio (or Loxodonta fransseni) should be abandoned.     

Colonization of Ireland: revisiting 'the pygmy shrew syndrome' using mitochondrial, Y chromosomal and microsatellite markers

There is great uncertainty about how Ireland attained its current fauna and flora. Long-distance human-mediated colonization from southwestern Europe has been seen as a possible way that Ireland obtained many of its species; however, Britain has (surprisingly) been neglected as a source area for Ireland. The pygmy shrew has long been considered an illustrative model species, such that the uncertainty of the Irish colonization process has been dubbed 'the pygmy shrew syndrome'. Here, we used new genetic data consisting of 218 cytochrome (cyt) b sequences, 153 control region sequences, 17 Y-intron sequences and 335 microsatellite multilocus genotypes to distinguish between four possible hypotheses for the colonization of the British Isles, formulated in the context of previously published data. Cyt b sequences from western Europe were basal to those found in Ireland, but also to those found in the periphery of Britain and several offshore islands. Although the central cyt b haplotype in Ireland was found in northern Spain, we argue that it most likely occurred in Britain also, from where the pygmy shrew colonized Ireland as a human introduction during the Holocene. Y-intron and microsatellite data are consistent with this hypothesis, and the biological traits and distributional data of pygmy shrews argue against long-distance colonization from Spain. The compact starburst of the Irish cyt b expansion and the low genetic diversity across all markers strongly suggests a recent colonization. This detailed molecular study of the pygmy shrew provides a new perspective on an old colonization question.     

Does predation maintain tit community diversity?

European tits of the genus Parus constitute a complex group of coexisting boreal birds. Here we present a survey of the distribution of three coniferous-living Parus species and one of their main predators, the pygmy owl ( Glaucidium passerinum ), on nine isolated islands in Scandinavia. On all islands the coal tit ( Parus ater ) is the sole tit species when the pygmy owl is absent. The two larger species, the willow tit ( P. montanus ) and the crested tit ( P. cristatus ), only coexist with the coal tit when pygmy owls are present. We suggest that the coexistence of willow tits, crested tits and coal tits is the result of a combination of competition for food and predator-safe foraging sites. The smaller coal tit is superior in exploitation competition for food, while the two larger species have an advantage in interference competition for predator-safe foraging sites. The association between the distribution of the pygmy owl and the two larger tit species on isolated islands in Scandinavia is consistent with the idea that the pygmy owl is a keystone predator.     

Vulnerable island carnivores: the endangered endemic dwarf procyonids from Cozumel Island

Insular carnivores represent some of the most critically threatened species, but also the least known. To evaluate the conservation status of these species, thorough abundance estimates are urgently required. To better understand the population biology and conservation status of the endemic and threatened pygmy raccoon (Procyon pygmaeus) and dwarf coati (Nasua nelsoni) on Cozumel Island, Mexico, we worked island-wide to identify the presence of these species, and for the pygmy raccoon we studied several populations in depth during 2001–2003. On Cozumel, trapping was conducted for >6,600 trap nights in 19 locations of varying habitat types. A total of 96 pygmy raccoons (47 males and 49 females) and a single adult, male dwarf coati (N. nelsoni) were captured. Estimated total annual pygmy raccoon population size ± SE was 80 ± 26.1, resulting in an average density of 22 ± 5.1 raccoons/km² for the three small sites where the animals persist. Based in part on the findings of this study that indicate these species have a restricted range and small population numbers, the IUCN recently changed the listing of the pygmy raccoon to Critically Endangered from Endangered. In contrast, the status of the dwarf coati (Endangered) has not been changed, although the taxon is in eminent danger of extinction and in need of immediate conservation action.     

Prioritizing the world's islands for vertebrate-eradication programmes

In the last 400 years, more species have become extinct on small islands than on continents. Yet, scant attention has hitherto been paid to prioritizing island restorations. Nevertheless, considerable conservation effort is now devoted to removing a major cause of these extinctions – invasive alien vertebrates. Because modern techniques allow the clearance of invasive vertebrates from quite large islands (up to 1000 km²), many islands are candidates for restoration. A robust strategy for allocating available funds is urgently needed. It requires, for each candidate island, an objective estimation of conservation gain and a method for predicting its financial cost. Our earlier work showed that a good first-pass estimate of vertebrate eradication costs can be made using just island area and target species. Costs increase with island area, while rodents are more expensive per unit area than ungulates. Here, we develop a method for assessing the conservation benefit of a proposed eradication and apply the method to threatened birds, but not other taxa. The method, combining information on how threatened a species is, on the impact of alien vertebrates on that species and on the islands on which the species occurs, allows us to present a means of determining which islands yield the greatest conservation benefit per unit of expenditure on vertebrate eradication. In general, although greater overall benefit would accrue to birds from eradication of invasive vertebrates on larger islands, benefit per unit of expenditure is the highest on relatively small islands, and we identify those that should be priority targets for future eradications. Crucially, this quantitative assessment provides considerable efficiency gains over more opportunistic targeting of islands. The method could be adapted to prioritize islands on a regional or national basis, or with different conservation gains in mind.     

Evolutionary consequences of ecological release in Caribbean Anolis lizards

On the large islands of the Greater Antilles, multi-species communities of Anolis lizards are composed of species specialized to use particular habitats; similar sets of specialized species have evolved independently on each island. We studied species of anoles found on small Caribbean islands. Because these islands contain at most only one other species of anole, we predicted that species on these islands should not be as specialized as Greater Antillean species; rather, they might be expected to exhibit a generalized morphology and a greater breadth of habitat use. Our findings, however, do not confirm these predictions. Lesser Antillean species do not exhibit greater breadth of habitat use than Greater Antillean species, nor do they exhibit a generalized morphology. Most species are ecologically and morphologically similar to specialized trunk-crown anoles of the Greater Antilles, although some species exhibit morphologies unlike those seen in Greater Antillean species. Among descendants of specialized Greater Antillean species occurring on one-or two-species islands, most descendants of trunk-crown species have diverged relatively little, whereas several descendants of trunk-ground anoles have diverged considerably. Consequently, we propose that ancestral species in the Greater Antilles may have been trunk-crown anoles.     

Little evidence for sympatric speciation in island birds

It has been suggested that the presence of sister species in small circumscribed areas, such as isolated lakes or islands, might imply that these species originated sympatrically. To investigate this possibility in birds, we searched for endemic, congeneric species on isolated islands in the ocean. Among 46 islands and small archipelagos chosen because they contain at least one species of endemic land bird, we identified seven pairs of endemic congeners (excluding flightless rails). Of these seven, only four pairs are potentially sister species and thus possible candidates for sympatric speciation. However, three of these four pairs have always been considered the results of double invasion from a mainland source (in two of these cases, molecular-phylogenetic work has either confirmed a double invasion or is ambiguous). The one remaining pair may have speciated allopatrically on a small archipelago. Additional phylogenetic studies are required to understand these cases, and our results should also be considered in light of the large number of island-bird extinctions in historic time. We conclude that, at present, there is little evidence for sympatric speciation in island birds.     

Do elephants prevent other African herbivores from using waterholes in the dry season?

In some African protected areas, concerns have arisen about the influence of locally high elephant numbers on other forms of biodiversity. In arid and semi-arid savannas, surface-water resources are scarce and agonistic interactions between elephants and other herbivores have been reported at waterholes, yet surprisingly very little is known about the impact of elephants on the use of waterholes by other herbivores. Here, we test whether when there are elephants at a waterhole, other herbivores (1) do not change their drinking behaviour; (2) spend shorter time around the water because they are disturbed by elephants’ presence and consequently have to leave the waterhole area probably without having met their water requirements, or (3) spend more time around the water probably owing to an increase in vigilance activities or because the presence of elephants may signal safety from predators. Results show that all species spend longer time around water when there are elephants at the waterhole, although the difference is not large. Consequently, this study strongly suggests that elephants do not prevent other herbivores from drinking (time at waterholes is not shortened when elephants are around). Further, if the additional time spent to drink is linked to an increased vigilance, the difference is not large, and hence unlikely to affect the population dynamics of other herbivores.     

Ventilatory and metabolic responses to hypoxia in the smallest simian primate, the pygmy marmoset.

The pygmy marmoset (Cebuella pygmaea) is the smallest New World Monkey (average body mass of 120-130 g). As such, it faces possible challenges to thermoregulation. Small mammals (e.g., rats) are well known to lower body temperature and metabolism in response to hypoxia; however, small primates have not been studied in this respect nor have, in general, the interactions between metabolism and ventilation. Because little is known about these responses in small primates, it seemed of great interest to assess the hypoxia-induced metabolic depression and drop in body temperature and the associated ventilatory requirements in this species under hypoxic conditions. Exposure to graded hypoxia (30 min at each of 18, 16, 14, 12, and 10% O(2)) caused body temperature to drop from the normoxic value of 39 to 37 degrees C. This was accompanied by a marked metabolic depression (O(2) consumption was approximately 68% of the normoxic value, implying a suppression of metabolism greater than that predicted from a typical value of the effect of 10 degrees C change on metabolism of 2-3 times). Minute ventilation declined in parallel to metabolism, maintaining a constant air-convection requirement during hypoxia; thus this species did not show the typical mammalian hyperventilation. Acute exposure to 10% O(2) led to a similar overall decline in metabolism and body temperature and qualitative differences in the timing of these changes. The pygmy marmoset shares some similarities in its hypoxic metabolic response with other mammals of similar size yet appears to be unique in its much diminished ventilatory response to hypoxia.     

Rough-Legged Buzzards,Arctic Foxes and Red Foxes in a Tundra Ecosystem without Rodents

Small rodents with multi-annual population cycles strongly influence the dynamics of food webs, and in particular predator-prey interactions, across most of the tundra biome. Rodents are however absent from some arctic islands, and studies on performance of arctic predators under such circumstances may be very instructive since rodent cycles have been predicted to collapse in a warming Arctic. Here we document for the first time how three normally rodent-dependent predator species—rough-legged buzzard, arctic fox and red fox – perform in a low-arctic ecosystem with no rodents. During six years (in 2006-2008 and 2011-2013) we studied diet and breeding performance of these predators in the rodent-free Kolguev Island in Arctic Russia. The rough-legged buzzards, previously known to be a small rodent specialist, have only during the last two decades become established on Kolguev Island. The buzzards successfully breed on the island at stable low density, but with high productivity based on goslings and willow ptarmigan as their main prey – altogether representing a novel ecological situation for this species. Breeding density of arctic fox varied from year to year, but with stable productivity based on mainly geese as prey. The density dynamic of the arctic fox appeared to be correlated with the date of spring arrival of the geese. Red foxes breed regularly on the island but in very low numbers that appear to have been unchanged over a long period – a situation that resemble what has been recently documented from Arctic America. Our study suggests that the three predators found breeding on Kolguev Island possess capacities for shifting to changing circumstances in low-arctic ecosystem as long as other small - medium sized terrestrial herbivores are present in good numbers.     

Classification tree methods provide a multifactorial approach to predicting insular body size evolution in rodents

Many hypotheses have been proposed to explain size changes in insular mammals, but no single variable suffices to explain the diversity of responses, particularly within Rodentia. Here in a data set on insular rodents, we observe strong consistency in the direction of size change within islands and within species but (outside of Heteromyidae) little consistency at broader taxonomic scales. Using traits of islands and of species in a classification tree analysis, we find the most important factor predicting direction of change to be mainland body mass (large rodents decrease, small ones increase); other variables (island climate, number of rodent species, and area) were significant, although their roles as revealed by the classification tree were context dependent. Ecological interactions appear relatively uninformative, and on any given island, the largest and smallest rodent species converged or diverged in size with equal frequency. Our approach provides a promising framework for continuing examination of insular body size evolution.     

Foraging impacts of Asian megafauna on tropical rain forest structure and biodiversity

Megaherbivores are known to influence the structure, composition, and diversity of vegetation. In Central Africa, forest elephants act as ecological filters by breaking tree saplings and stripping them of foliage. Much less is known about impacts of megafauna on Southeast Asian rain forests. Here, we ask whether herbivory by Asian megafauna has impacts analogous to those of African forest elephants. To answer this, we studied forest (1) structure, (2) composition, (3) diversity, and (4) tree scars in Belum and Krau, two protected areas of Peninsular Malaysia, and compared the results with those obtained in African forests. Elephants are abundant in Belum but have been absent in Krau since 1993. We found that stem density and diversity, especially of tree saplings, were higher in Krau than in Belum. Palms and other monocots were also more abundant in Krau. In Belum, however, small monocots (<1 m tall) were very abundant but larger ones (>1 m tall) were virtually absent, suggesting size‐selective removal. The frequency of stem‐break scars was equal at Belum and Krau but less than in Central Africa and greater than in the Peruvian Amazon where tapirs are the only megafauna. Pigs and tapirs could also contribute to the high frequency of tree scars recorded in Malaysian forests. Forest‐dwelling elephants in Asia seem to have a reduced impact on tree saplings compared to African forest elephants, but a very strong impact on monocots.     

Restricted plant species on sub-Antarctic Macquarie and Heard Islands

The recent distributional history of two Macquarie Island vascular plant species, Carex trifida, Poa litorosa, and the Heard Island vascular plant, Ranunculus crassipes is examined. C. trifida is known from only one small population on the north west coast of Macquarie Island. Four populations of P. litorosa were first recorded in the 1980s; we believe however, that it was first observed, but misidentified in the 1950s. R. crassipes was first discovered on Heard Island in the late 1980s. We argue that all three species are indigenous and arrived on their respective islands within the last 200 years by natural processes, most likely from warmer neighbouring islands, where these species have more extensive distributions. There have been small-scale changes in distribution of all species, mainly expansion. Further expansion of all three species is expected as a response to warming climate. Feral rabbit grazing is having a confounding negative influence on populations of P. litorosa.     

Forest Tree Persistence, Elephants, and Stem Scars

Sixteen percent of tree stems 10 cm diameter or greater recorded in seven 1 ha plots in Rabongo Forest, Uganda had stem damage attributable to elephants (Loxodonta africana). We propose four strategies that may help tree species persist under these conditions: repellence, resistance, tolerance and avoidance. We sought and found evidence for each strategy. Large, shade‐tolerant Cynometra alexandri dominated basal area (often >50%) and showed severe scarring. Nearly 80 percent of stems were small pioneer species. Scarring frequency and intensity increased with stem size. Stem‐size distributions declined steeply, implying a high mortality to growth rate ratio. Tree species with spiny stems or with known toxic bark defenses were unscarred. Epiphytic figs escaped damage while at small sizes. Mid‐successional tree species were scarce and appeared sensitive to elephants. Savanna species were seldom scarred. Taking stem size‐effects into account by using a per‐stem logistic modeling approach, scarring became more probable with slower growth and with increasing species abundance, and also varied with location. Pioneer and shade‐bearer guilds showed a deficit of intermediate‐sized stems. Evidence that selective elephant damage is responsible for monodominant C. alexandri forests remains equivocal; however, elephants do influence tree diversity, forest structure, and the wider landscape.     

Interpopulation differences in exudate feeding of pygmy marmosets in Ecuadorian Amazonia

Local variations in fruit- and leaf-eating have been reported for some primate species; however, similar variations in exudate-feeding of pygmy marmosets, one of the most specialized neotropical primate species, have not been studied. In our 3-year study of four populations of pygmy marmosets in northeastern Ecuador, we characterized their exudate-feeding behavior by describing the use of exudate sources. We tested whether the use of exudate species was related to ecological factors such as the availability of exudate species in an area. We estimated the daily activity budgets of the groups with 1-hr scan samples and found significant interpopulation differences in the time spent on exudate feeding. We recorded a total of 18 exudate species used in the four populations; however, the populations differed in the total number of species used and in the preferred species. The most commonly used plant species were Sterculia apetala at San Pablo, Cedrela odorata at Sacha, Inga marginata at Amazoonico, and Parkia balslevii at Zancudo. We recorded the presence and abundance of the 18 exudate species in 90-m transects in the home range of each group and in one additional control area that contained no marmosets, for each population. Differences in the most-used exudate species among populations did not appear to be related to the availability of these species in each population, i.e., the marmosets did not use at random the exudate species available within their range, nor did they use more often the exudate species that were more abundant in their home ranges. One implication of our results for conservation is that protecting exudate resources based on data from only one area will not be sufficient to preserve pygmy marmosets in all populations.     

Does relaxed predation drive phenotypic divergence among insular populations?

The evolution of striking phenotypes on islands is a well‐known phenomenon, and there has been a long‐standing debate on the patterns of body size evolution on islands. The ecological causes driving divergence in insular populations are, however, poorly understood. Reduced predator fauna is expected to lower escape propensity, increase body size and relax selection for crypsis in small‐bodied, insular prey species. Here, we investigated whether escape behaviour, body size and dorsal coloration have diverged as predicted under predation release in spatially replicated islet and mainland populations of the lizard species Podarcis gaigeae. We show that islet lizards escape approaching observers at shorter distances and are larger than mainland lizards. Additionally, we found evidence for larger between‐population variation in body size among the islet populations than mainland populations. Moreover, islet populations are significantly more divergent in dorsal coloration and match their respective habitats poorer than mainland lizards. These results strongly suggest that predation release on islets has driven population divergence in phenotypic and behavioural traits and that selective release has affected both trait means and variances. Relaxed predation pressure is therefore likely to be one of the major ecological factors driving body size divergence on these islands.     

Dispersal ability of island endemic plants: What can we learn using multiple dispersal traits?

Island endemic species are expected to have lower dispersal ability than their non-endemic congeners. Several studies have demonstrated differences in diaspore morphology between endemic species and their non-endemic congeners. It is, however, relatively difficult to translate the differences in morphology of the diaspores into differences in dispersal ability. To avoid this problem, we measured directly dispersal values (anemo-, hydro-, exozoo- and endozoo-chory) of 27 pairs of closely related endemic and non-endemic species from Canary Islands. We did not explicitly support the hypothesis about the loss of dispersal ability of island species. The comparison of pairs of endemic and non-endemic species showed the reduction in dispersal potential only for endozoochory. In many cases, endemic species had, in fact, the same or better dispersal ability than their non-endemic congeners. Higher dispersal ability of endemic species could have been evolved as a consequence of species subsequent dispersal to neighboring islands. As a support for this we found that the endemic species dispersing better than their non-endemic congeners also occupy more islands within the archipelago. We conclude that reduction of dispersal ability of species on islands may not be as general as previously expected and we need to take into account multiple species traits to understand the possible evolution of species dispersal potential.     

厦门近岸海域无居民海岛植物区系和物种组成相似性

为摸清厦门近岸无居民海岛的主要植物群落类型, 于2017年10月调查了12个无居民海岛的植物组成, 共记录到维管束植物360种, 其中乔木78种, 小乔木或灌木109种, 藤本23种, 草本150种; 包含外来入侵植物49种, 其中恶性入侵种10种。植物区系分析表明, 厦门周边12个无居民海岛植物主要由泛热带分布种及其变型组成, 以热带、亚热带成分占主导地位, 符合其亚热带地理分布特点。总体上, 维管束植物物种相似性较高, 物种丰富度受海岛面积的影响较大, 与海岛面积存在显著的对数和幂函数关系。此外, 岸线长度、高程、周长/面积比等空间参数也对海岛物种丰富度产生一定的影响。岛屿间维管束植物物种相似性受生境多样性和岛屿边缘效应的影响, 仅吾屿可能存在小岛屿效应。