不同寄主来源白假丝酵母菌多态性与耐药性分析

为研究白色假丝酵母菌的分子多样性情况,探讨RAPD基因多态性与药物敏感性的关系,在获得病菌分离物的基础上,应用经筛选的10条10 bp随机引物,对18株病菌分离物进行RAPD分析,利用UPGMA对结果进行聚类.RAPD扩增的指纹图谱清晰,带型稳定,多态性丰富,可以作为白假丝酵母菌分型方法,18株不同来源的菌株可大致分为6种亲缘关系.药敏结果显示导致出现耐药的机制可能并不相同.所以利用RAPD标记技术在基因水平上对白色假丝酵母菌进行分子分型和鉴定是可行的.     

米根霉发酵生产L-乳酸

报道了Ｌ－乳酸菌株的分离与筛选,探讨了不同碳源、氮源、通气量、温度等发酵条件对产Ｌ－乳酸的影响,从７８株米根霉中筛选出１３株产Ｌ－乳酸较高的菌株,其中米根霉（Ｒｈｉｚｏｐｕｓ ｏｒｙｚａｅ）Ｒｓ９２８产Ｌ－乳酸最高,产酸最稳定。试验结果表明,该菌株最适发酵培养组成（％）：淀粉水解糖１６,ＭｇＳＯ４ ０．０８,ＫＨ２ＰＯ４ ０．０５,ＺｎＳＯ４ ０．０１,ＣａＣＯ３ ７,ｐＨ自然。在６０ｔ发酵罐中,     

崇明老白酒酿造过程中酵母菌的鉴定及其特性初探

从八二酒曲及酿造崇明老白酒过程中分离纯化得到1株白色酵母菌和1株红色酵母菌,采用分子生物学方法进行鉴定,并对其酿造老白酒的特性进行了分析。结果显示,八二酒曲及崇明老白酒酿造过程中的优势酵母菌为酿酒酵母(Saccaromyces cerevisiae),从酿酒过程中分离的红色酵母菌为粘红酵母(Rhodotorula mucilaginosa)。采用粘红酵母和米根霉曲酿造的酒液的酒精度为11.9%vol,残余还原糖含量为11.2 g/100 m L,总酸含量为4.59 g/L,总酯含量为4.42 g/L。纯化的酿酒酵母和米根霉曲酿成的酒液口味醇和爽口,酒曲的纯化有助于开发出口感更爽口的老白酒。混合酵母和米根霉曲酿造的酒液呈典型的崇明老白酒风味,粘红酵母的参与对崇明老白酒口味风格的形成有一定的作用。     

潞酒酒窖壁及酒缸上可培养真菌的分离和鉴定

采用察氏培养基对山西省长治市潞酒有限公司地下酒窖墙壁及酒缸外壁上采集的灰黑色霉状物进行分离纯化以获得真菌纯培养物,然后用扫描电镜和乳酸石炭酸棉蓝染色法在显微镜下观察纯培养物的菌丝体,再利用18S rDNA序列、β-tubulin微管蛋白基因(BenA)序列、Calmodulin钙调蛋白基因(CaM)序列分析技术分别对分离的纯培养物进行分子水平的鉴定并构建系统发育树。共分离到3株可培养真菌,分别是LJB-1、LJ3-2和LJ5-2。其中菌株LJB-1鉴定为地窖无孢霉Racodium cellare,该种在国内未见报道,属于国内新记录种;菌株LJ3-2和LJ5-2分别鉴定为小刺青霉Penicillium spinulosum和产黄青霉Penicillium chrysogenum,这两个种在酒窖菌中鲜见报道。     

一株产生L-乳酸的米根霉

为获得理想的L-乳酸产生菌,选择适合根霉属微生物生长的土样,利用溴甲酚绿平板结合摇瓶复筛的方法得到了一株有一定L-乳酸积累能力的米根霉Rhizopus oryzae CS323。摇瓶发酵试验显示,在未优化发酵条件的情况下发酵48h,米根霉CS323L-乳酸积累量达到50.1g/L,是一株有良好改造潜力的L-乳酸产生菌,适合作为进一步诱变育种的出发菌株。     

白地霉遗传多样性与生态地理起源地的相关性分析

采用随机扩增多态性DNA(RAPD)分子标记方法从22个随机引物中筛选出TubeB-03、TubeB-07、TubeB-12三个最佳引物分析来源于7个省区的23株白地霉的种内遗传多样性,并用UPGMA聚类分析法评价它们之间的亲缘关系.结果表明,不同来源地的白地霉通过RAPD分析显示出较高的遗传差异性,并且,在系统进化树上处于同一分枝的菌株来源于生态地理相近的区域,仅有个别例外.因此,应用RAPD分子标记技术对来自不同生态区的白地霉种内遗传多样性和亲缘关系进行分析是可行的.     

潮霉素B抗性为选择标记的整合型表达载体的构建及在米根霉中的遗传转化

为了建立适合米根霉的遗传转化体系,应用重叠延伸PCR的方法构建了以潮霉素B抗性为选择标记的单交换整合型表达载体p BS-hygro-ldh A;分别采用PEG/Ca Cl2介导的原生质体转化、原生质体电转化及萌发孢子电转化的方法将表达载体p BS-hygro-ldh A转化入米根霉AS 3.819菌株中,并研究了菌丝酶解时间、孢子萌发时间以及电转化电场强度对于转化效率的影响;通过荧光定量PCR(q PCR)对米根霉转化子基因组中质粒整合拷贝数进行了检测,并研究了其对米根霉转化子抗性稳定性的影响。实验结果表明成功获得整合了表达载体p BS-hygro-ldh A的米根霉转化子。菌丝酶解140 min产生的原生质体其再生率和转化率最高,原生质体电转化最佳电场强度为13 k V/cm,孢子萌发2.5 h转化率最高,萌发孢子电转化最佳电场强度为14 k V/cm。萌发孢子电转化方法转化率要高于原生质体转化的方法。荧光定量PCR检测结果表明,在一定范围内,高质粒整合拷贝数的米根霉转化子比较稳定。研究建立了用于工业米根霉菌株的遗传转化体系,为米根霉代谢调控研究以及菌种改造工作提供了基础与支持。     

米根霉孢子凝聚条件的研究

米根霉是食品工业中的一种重要微生物。米根霉能产生多种用于食品工业的代谢产物,其菌丝形态对产物的积累有重要影响。传统上,米根霉的菌丝球形成方式是非凝聚型。本研究通过改变培养基的pH值、糖含量等条件,探讨菌丝球的形成方式。利用不同生长状态下的米根霉孢子,测定相对应的电荷和疏水值,得到控制米根霉孢子凝聚的条件。研究结果表明培养基pH 3.0、葡萄糖320 g/L时,在34℃、200 r/min的培养条件下,米根霉孢子达到了最高的凝聚率88.62%。本研究改变了米根霉菌丝球形成的方式,为米根霉等丝状真菌菌丝球的研究提供了一定的基础和依据。     

刺槐树洞悬土可培养真菌群落组成及其多样性分析

结合形态特征与分子鉴定,分析贵州贵阳花溪刺槐"树洞悬土"和其对应地下土样中可培养真菌的群落组成。结果表明,树洞悬土中共分离得到真菌7属19种315株,其中普通青霉Penicillium commune为优势种,相对多度为81.11%;地下土壤共分离到真菌6属18种156株,优势种也是普通青霉,但相对多度仅为24.93%。树洞悬土中的真菌数量明显高于地下土,并且二者在真菌种群的多样性水平上也存在一定差异,树洞悬土的Shannon-Wiener多样性指数H=0.8291,Simpson优势度指数D=0.3373,Pielou均匀度指数J=0.2815,Margalef丰富度指数R=1.3300,均低于地下土。同时在树洞悬土中分离到一些独特真菌,如小克银汉霉Cunninghamella elegans、帚状刺壳霉Chaetopyrena penicillata和雪白腐殖霉Humicola nivea。刺槐树洞悬土和对应地下土壤真菌群落的相似性较低(Cj=0.2300)。     

固定化米根霉发酵制L-乳酸

采用海藻酸钙包埋法固定化米根霉（Ｒｈｉｚｏｐｕｓｏｒｙｚａｅ）,菌体在颗粒表面形成一层菌丝膜,有利于氧气和其它营养物质的传递;三相流化床生物反应器结构简单、动力消耗低、反应器内物质混合均匀、氧传递量大于固定化米根霉的需氧量,非常适合好氧的固定化米根霉发酵。利用它进行重复使用固定化米根霉的间歇发酵或连续发酵制备Ｌ 乳酸,整个过程一般可持续两周以上。固定化米根霉的产酸速率达１６～１８ｇ／Ｌ ｂｅａｄ．ｈｒ,得率为７０～８０％,反应器生产能力约为传统搅拌罐的３倍。采用海藻酸钙包埋法固定化米根霉在三相流化床生物反应器中进行发酵可以有效地提高Ｌ 乳酸的生产效率,具有良好的工业应用前景。     

中国棉花枯萎菌生理小种的RAPD分析

利用随机扩增多态性ＤＮＡ（ＲＡＰＤ）分子标记方法对我国棉花枯萎菌３个生理小种（３、７、８号）进行遗传多样性分析,以筛选出的１０个随机引物对采自我国１１个省（自治区）的２６个代表菌株及国外３个不同生理小种对照菌株进行ＲＡＰＤ－ＰＣＲ增,共产生了１４０个ＲＡＰＤ分子标记,其中８７．８％具有多态性。通过聚类分析确定了供试小种间的亲缘关系,并寻找到了我国３、７、８号小种的特异条带,为确立我国棉花枯萎菌生理小种在国际上的分类地位提供了可靠的分子证据。     

中国棉花枯萎菌生理小种的RAPD分析*

利用随机扩增多态性ＤＮＡ（ＲＡＰＤ）分子标记方法对我国棉花枯萎菌３个生理小种（３、７、８号）进行遗传多样性分析,以筛选出的１０个随机引物对采自我国１１个省（自治区）的２６个代表菌株及国外３个不同生理小种对照菌株进行ＲＡＰＤ－ＰＣＲ增,共产生了１４０个ＲＡＰＤ分子标记,其中８７．８％具有多态性。通过聚类分析确定了供试小种间的亲缘关系,并寻找到了我国３、７、８号小种的特异条带,为确立我国棉花枯萎菌生理小种在国际上的分类地位提供了可靠的分子证据。     

基于RAPD、ISSR和AFLP对西瓜枯萎病菌遗传多样性的评价

利用RAPD、ISSR和AFLP分子标记技术对50个西瓜枯萎病菌株进行了分析。结果表明,21个RAPD引物、21个ISSR引物和21对AFLP引物分别对供试菌株扩增出113、134和389条带,三种分子标记的遗传相似系数比较一致,均可揭示西瓜枯萎病菌的遗传变异特点。三种分子标记产生的聚类分析结果存在一定差异,其中RAPD类群与生理小种和地理来源之间均不存在明显关系;而AFLP和ISSR类群与生理小种之间存在一定相关性,与菌株的地理来源关系不明显。     

基于RAPD、ISSR和AFLP对西瓜枯萎病菌遗传多样性的评价

利用RAPD、ISSR和AFLP分子标记技术对50个西瓜枯萎病菌株进行了分析。结果表明,21个RAPD引物、21个ISSR引物和21对AFLP引物分别对供试菌株扩增出113、134和389条带,三种分子标记的遗传相似系数比较一致,均可揭示西瓜枯萎病菌的遗传变异特点。三种分子标记产生的聚类分析结果存在一定差异,其中RAPD类群与生理小种和地理来源之间均不存在明显关系;而AFLP和ISSR类群与生理小种之间存在一定相关性,与菌株的地理来源关系不明显。     

Use of RAPD and ISSR Markers in Detection of Genetic Variation and Population Structure among Fusarium oxysporum f. sp. ciceris Isolates on Chickpea in Turkey

Genetic variation among the isolates of Fusarium oxysporum f. sp. ciceris, the causal agent of chickpea wilt worldwide, was analysed using pathogenicity tests and molecular markers – random amplified polymorphic DNA (RAPD) and inter‐simple sequence repeat (ISSR) polymorphism. Hundred and eight isolates were obtained from diseased chickpea plants in 13 different provinces of Turkey, out of which 74 isolates were assessed using 30 arbitrary decamer primers and 20 ISSR primers. Unweighted pair‐grouped method by arithmetic average cluster analysis of RAPD, ISSR and RAPD + ISSR datasets provided a substantially similar discrimination among Turkish isolates and divided into three major groups. Group 1, 2 and 3 consisted of 41, 18 and 15 isolates, respectively. These methods revealed a considerable genetic variation among Turkish isolates, but no correlation with regard to the clustering of isolates from different geographic regions. Analysis of molecular variance confirmed that most genetic variability resulted from the differences among isolates within regions. Our results also indicated that the low‐genetic differentiation (F_ST) and high gene flow (Nm) among populations had a significant effect on the emergence and evolutionary development of F. oxysporum f. sp. ciceris. This is the first report on genetic diversity and population structure of F. oxysporum isolates on chickpea in Turkey.     

Variability of Indian Isolates of Tilletia indica Assessed by Pathogenicity and Molecular Markers

Twenty isolates of Tilletia indica collected from sites in North and North‐western India showed pathogenic variation on 18 host differentials. Sixteen aggressive pathotypes were identified on the basis of percent coefficient of infection (PCI). Two major clusters were apparent in the dendrogram; cluster 1 comprised 13 isolates and cluster two consisted of seven isolates. One of the isolate Kashipur had a high PCI on most of the host differentials compared to other isolates. Polymerase chain reaction‐based random amplified polymorphic DNA (PCR – RAPD) analysis also divided isolates into two major clusters, one comprising of 5 isolates collected from hill and foot‐hill sites and another group comprising of 15 isolates collected from plain sites. Thus, the clusters identified based on PCI did not match closely with those identified by molecular analysis based on RAPD. Although diversity among the isolates of T. indica was absent in the rDNA‐ITS region, our study based on pathogenicity and molecular markers confirms the existence of great diversity in the pathogen, also shifting of ‘hot spot’ areas from one place to another within Karnal bunt prevailing areas.     

海南省香蕉枯萎菌生理小种的RAPD分析

利用随机扩增多态性DNA(RAPD)分子标记方法对海南省香蕉枯萎病菌2个生理小种(小种1和小种4)进行遗传多样性分析,以筛选出的15个随机引物对采自海南省各市县发病蕉区的分别属于1号生理小种和4号生理小种的16个代表菌株及广东省2个1号和4号生理小种对照菌株进行RAPD-PCR扩增,结果产生97个RAPD分子标记,其中多态性的条带有76条,通过聚类分析探讨了供试小种间的亲缘关系,并寻找到了1、4号生理小种的特异性条带,为在分子水平上进行香蕉枯萎病菌生理小种鉴定提供更为便利的手段。     

河北鸭梨病果上链格孢分离系的形态及分子特性研究

A total of 123 Alternaria isolates were obtained from roting fruits of Pyrus bretschneideri "Ya Li" collected in Hebei Province, China. The isolates, according to morphological characteristics of conidia and sporulation patterns, were segregated into four groups: A. alternata group, A. tenuissima group, A. yaliinficiens group and Alternaria sp. group. Molecular characteristics of part of the isolates were determined using random amplified polymorphism DNA (RAPD) analysis. Based on cluster analysis of RAPD data, large-and small-spored Alternaria spp. were evidently distinguished, and the small-spored species can form five clusters that fundamentally paralleled the morphological groupings.     

Use of RAPD-PCR fingerprinting to detect genetic diversity of soil Streptomyces isolates

Random amplified polymorphic DNA (RAPD) was used for identification and assessment of genetic diversity between isolates of Streptomyces from soil. Genomic DNA from 18 Streptomyces isolates and 2 reference strains were amplified using four different 10-mer primers. Different DNA fingerprinting patterns were obtained for all the isolates. Electrophoretic and cluster analysis of the amplification products revealed incidence of polymorphism among the isolates and none of them was identical to the reference strains although there were some common amplification bands. Two highly divergent groups were determined among the isolates. The results indicate that RAPD is an efficient method for discriminating and studying genetic diversity of Streptomyces isolates.     

Genetic and Pathogenic Characterization of Different Stagonospora sp. Isolated from Bindweed

Genetic variation among 38 isolates of Stagonospora sp. and 10 isolates of Septoria sp. from bindweed was studied using (a) restriction fragment length plymorphism (RFLP) analysis of the internal transcribed spacer (ITS) region, and (b) random amplified polymorphic DNA (RAPD) PCR analysis. RFLP analysis revealed three types of fragment patterns among the isolates. A total of 26 distinct groups, based on common fragment patterns, were identified using cluster analysis of the RAPD-PCR data. When the grouping results of the two methods were compared, the fragment pattern types and clusters were generally in agreement. The degree of pathogenicity of six genetically characterized isolates of Stagonospora sp. was assessed on three ecotypes of field bindweed (Convolvulus arvensis). Disease symptoms were observed with all isolates on all ecotypes, but only Stagonospora convolvuli strain LA39, a potential biocontrol agent, showed a high degree of pathogenicity on all ecotypes. A mixture of two Stagonospora sp. enhanced the mean necrotic leaf area on bindweed from 33.9 and 39.0% (when applied alone) to 64.9% applied together at the same final concentration of 5 X 106 spores ml -1 . Molecular methods were used to identify the two pathogens. Both were present on the same plant when applied together, but never found in the same lesion.