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1.
Polymorphisms in the coding and noncoding regions of murinePgk-1 alleles   总被引:14,自引:0,他引:14  
The mouse X-linkedPgk-1 gene encodes phosphoglycerate kinase. When transfected into human cells, thePgk-1b allele causes the appearance of mouse PGK-1b enzyme activity. We describe here cloning of mousePgk-1a, an allele ofPgk-1 which encodes an enzyme, PGK-1a, with distinct electrophoretic mobility. We constructed recombinants between the DNA encodingPgk-1b andPgk-1a and transfected these constructs into human to assess the electrophoretic characteristics of each recombinant. In this way the charge variation between the two proteins was localized to exons 4 or 5. Sequencing of these exons revealed a single base-pair difference between the two alleles at codon 155, which predicts the amino acids lysine and threonine in PGK-1b and PGK-1a, respectively. A number of other DNA sequence polymorphisms exist betweenPgk-1b andPgk-1a including part of an L1 repeated element unique toPgk-1a. This work was supported by the Medical Research Council of Canada, the National Cancer Institute of Canada, and the Deutsche Forschungsgemeinschaft, SFB 304.  相似文献   

2.
Erythrocytes of 119 mink, and tissue extracts of three mink, were examined for electrophoretic patterns of lactate dehydrogenase (LDH). A variant was detected at the B locus. There are two alleles, LDH-B a and LDH-B b; three phenotypes, LDH-Ba, LDH-Bab, and LDH-Bb; and three genotypes, LDH-B a/LDH-Ba, LDH-Ba/LDH-Bb, and LDH-B b/LDH-Bb. The inheritance as observed in 24 families agrees with an autosomal, codominant, two-allele system at the LDH B locus.Supported by National Research Council Grant A-4442 and the Ontario Department of Agriculture and Food.  相似文献   

3.
Due to the large number of possible applications of nanoparticles in cosmetic and medical products, the possible hazards of nanoparticles in the human body are a major concern. A worst-case scenario is that nanoparticles might cause health issues such as skin damage or even induce cancer. As a first step to study the toxicity of nanoparticles, we investigate the energy behaviour of a C60 fullerene interacting with a lipid bilayer. Using the 6–12 Lennard-Jones potential function and the continuous approximation, the equilibrium spacing between the two layers of a bilayer is predicted to be 3.36 ?. On assuming that there is a circular hole in the lipid bilayer, a relation for the molecular interaction energy is determined, involving the circular radius b of the hole and the perpendicular distance Z of the spherical fullerene from the hole. A graph of the minimum energy location Z min verses the hole radius b shows that a C60 fullerene first penetrates through a lipid bilayer when b > 6.81 ?, and shows a simple circular relation \textZmin2 + b2 = 6.812 {\text{Z}}_{{\min }}^2 + {b^{{2}}} = {6}.{8}{{1}^{{2}}} for Z min positive and b ≤ 6.81 ?. For b > 6.81, the fullerene relocates from the surface of the bilayer to the interior, and as the hole radius increases further it moves to the centre of the bilayer and remains there for increasing hole radii. Accordingly, our modelling indicates that at least for the system with no external forces, the C60 fullerene will not penetrate through the lipid bilayer but rather remains encased between the two layers at the mid-plane location.  相似文献   

4.
Synthesis of “reversed” methylenecyclopropane analogues of nucleoside phosphonates 6a,7a, 6b, and 7b is described. 1-Bromo-1-bromomethylcyclopropane 8 was converted to the bromocyclopropyl phosphonate 9 by Michaelis-Arbuzov reaction with triisopropyl phosphite. Base-catalyzed β-elimination and deacetylation gave the key Z- and E-hydroxymethylcyclopropyl phosphonates 10 and 11 separated by chromatography. The Mitsunobu type of alkylation of 10 or 11 with adenine or 2-amino-6-chloropurine afforded phosphonates 12a, 12b, 13a, and 13b. Acid hydrolysis furnished the adenine and guanine analogues 6a, 7a, 6b, and 7b. The E and Z configuration was assigned on the basis of NOE experiments with phosphonates 6b and 7b. All Z- and E-isomers were also distinguished by different chemical shifts of CH2O or CH2N (H4 or H4′). Significant differences of the chemical shifts of the cyclopropane C3(3’) carbons and coupling constants 3JP,C2(2’) or 3JP,C3(3’) selective for the Z- or E-isomers were also noted. Phosphonates 6a, 7a, 6b, and 7b are devoid of significant antiviral activity.  相似文献   

5.
The effect of drug-induced hypothyroidism on ventricular myosin gene expression was explored in a small marsupial, Antechinus flavipes. Pyrophosphate gel electrophoresis, SDS-PAGE and western blotting were used to analyse changes in native myosin isoforms and myosin heavy chains (MyHCs) in response to hypothyroidism. In some animals, five instead of the normal three native myosin components were found: V1a, V1b,V1c, V2 and V3, in order of decreasing mobility. In western blots, V1a, V1b, and V1c reacted with anti-α-MyHC antibody, but not with anti-β-MyHC, whereas V2 and V3 reacted with anti-β-MyHC antibody. SDS-PAGE of the unusual ventricular myosins revealed three MyHC isoforms, two of which bound anti-α-MyHC antibody while the third bound anti-β-MyHC antibody. We conclude that V1a, V1b, V1c are triplets arising from the dimerization of two distinct α-MyHC isoforms. Hypothyroidism, verified by metabolic studies, decreased α-MyHC content significantly (t-test, P < 0.001) from 91.6 ± 5.9% (SEM, n = 4) in control animals to 67.2 ± 5.7% (SEM, n = 4) in hypothyroid animals, with a concomitant increase in β-MyHC content. We conclude that in adult marsupials, ventricular myosins are also responsive to changes in the thyroid state as found in eutherians, and suggest that evolution of the molecular mechanisms underlying this thyroid responsiveness predate the divergence of marsupials and eutherians.  相似文献   

6.
The crystal and molecular structures of two α-aminoisobutyric acid (Aib)-containing diketopiperazines, cyclo(Aib-Aib) 1 and cyclo(Aib-L -Ile) 2 , are reported. Cyclo(Aib-Aib) crystallizes in the space group P1 with a = 5.649(3), b = 5.865(2), c = 8.363(1), α = 69.89(6), β = 113.04(8), γ = 116.0(3), and Z = 1, while 2 occurs in the space group P212121 with a = 6.177(1), b = 10.791(1), c = 16.676(1), and Z = 4. The structures of 1 and 2 have been refined to final R factors of 0.085 and 0.086, respectively. In both structures the diketopiperazine ring shows small but significant deviation from planarity. A very flat chair conformation is adopted by 1, in which the Cα atoms are displaced by 0.07 Å on each side of the mean plane, passing through the other four atoms of the ring. Cyclo(Aib-Ile) favors a slight boat conformation, with Aib Cα and Ile Cα atoms displaced by 0.11 and 0.05 Å on the same side of the mean plane formed by the other ring atoms. Structural features in these two molecules are compared with other related diketopiperazines.  相似文献   

7.
The surface charge of epithelial cells isolated from the toad bladder has been determined by the microscope method of cell electrophoresis. The cells possess a net negative charge, and a net surface charge density of 3.6 x 104 electronic charges per square micron at pH 7.3. Estimates of net surface charge over the alkaline pH range indicate (a) that an average distance of the order of 40 A separates the negatively charged groups, and (b) that amino as well as acid groups are present at the electrophoretic surface of shear. A significant increase in mobility following cyanate treatment of the cells suggests that a large proportion of the amino groups are the ε-amino groups of lysine. In view of the known effects of calcium and other divalent ions on cell permeability and cell adhesion, the extent of binding of calcium and magnesium to the cell surface was determined by the electrophoretic technique. Mobility was significantly decreased in the presence of calcium or magnesium, indicating that these ions are bound by surface groups. When the pH was lowered from 7.3 to 5.2, calcium binding was markedly decreased, an observation consistent with competition between calcium and hydrogen ions for a common receptor site.  相似文献   

8.
The electronic structural impact on intramolecular proton transfer in the cis- and trans-imino N7 and N9 tautomers of adenine (A) has been studied quantum mechanically, using density functional theory (B3LYP/TZVP, SAOP/TZ2P, LB94/TZ2P) and Green function (OVGF/TZVP) models. It is found that proton transfer does not significantly change isotropic properties but has profound impact on electron distributions of the species through anisotropic properties. The relative energies with respect to the canonical A tautomer (amino-9H), ΔE, for imino 7Hcis, imino 7Htrans, imino 9Hcis and imino 9Htrans are calculated as 16.15, 16.43, 18.46 and 13.80 kcal mol? 1 (B3LYP/TZVP model) and some minor changes in perimeters of the purine ring is also observed. The Hirshfeld atomic charges indicate that whether a proton attached to N(7) or N(9) causes a significant local charge redistribution. However, these charges are insensitive to cistrans proton transfer. Condensed Fukui function reveals N(10) and C(8) as the most electrophilic reactive site among N- and C-atom sites, respectively. We also found that proton transfer significantly alters in-plane σ orbitals, rather than out of plane π orbitals including the frontier orbital 6a″. Moreover, orbital based responses to various proton transfers are presented: the orbital 29a′ (HOMO-1) is a signature orbital differentiating all the four tautomers. Orbital 27a′ is a site (N(7) and N(9)) sensitive orbital, whereas orbital 22a′ is only sensitive to proton orientation on the imino group = N–H.  相似文献   

9.
The gastric H+ + K+ ATPase is a member of the phosphorylating class of transport ATPase. Based on sequence homologies and CHO content, there may be ab subunit associated with the catalytic subunit of the H+ + K+ ATPase. Its function, if present, is unknown. The pump catalyzes a stoichiometric exchange of H+ for K+, but is also able to transport Na+ in the forward direction. This suggests that the transport step involves hydronium rather than protons. The initial binding site is likely to contain a histidine residue to account for the high affinity of the cellular site. The extracellular site probably lacks this histidine, so that a low affinity for hydronium allows release into a solution of pH 0.8. Labelling with positively charge, luminally reactive reagents that block ATPase and pump activity has shown that a region containing H5 and H6 and the intervening luminal loop is involved in necessary conformational changes for normal pump activity. The calculated structure of this loop shows the presence of ana helical,b turn, andb strand sector, with negative charges close to the membrane domain. This sector provides a possible site of interaction of drugs with the H+ + K+ ATPase, and may be part of the K+ pathway in the enzyme.Emory University, Atlanta, Georgia.  相似文献   

10.
The copper(II), nickel(II) and silver(I) complexes of the pentadentate 17-membered macrocycle 1, 12, 15-triaza-3, 4:9, 10-dibenzo-5,8-dithiacycloheptadecane (L1) have been prepared as perchlorates and characterized by X-ray crystallography. The N3S2 ligand uses all donor atoms for complexation. The copper coordination is square pyramidal with one sulfur atom in the axial site. Ni(II) displays an octahedral coordination by an interaction with a water molecule. The Ag(I) coordination is best described as a distorted pentagonal bipyramid. In [CuL1]2+ the 1, 4, 7-triazaheptane fragment of L1 is meridionally coordinated, but facially in [NiL1(H2O)]2+ and intermediate in [AgL1](ClO4). Crystal data for [CuL1](ClO4)2: monoclinic, space group P21/n, a = 13.153(8), b = 11.951(5), c = 17.880(8)Å, β = 110.29(4)°, Z = 4, R = 0.086 for 2732 independent reflections with I 2σ(I); [NiL1(H2O)](ClO4)2: monoclinic, P21/a, a = 10.771(2), b= 16.157(2), c = 15.286(2) Å, β =93.08(1)°, Z = 4, R = 0.085 for 1464 independent reflections with I 2σ(I); [AgL1](ClO4): monoclinic, P21/n, a = 12.708(9), b = 9.483(7), c = 19.569(13) Å, β= 103.95(6)°, Z = 4, R = 0.039 for 3600 independent reflections with I 2σ(I).  相似文献   

11.
H.Y. Nakatani  J. Barber  J.A. Forrester 《BBA》1978,504(1):215-225
1. Particle microelectrophoresis mobility studies have been conducted with chloroplast thylakoid membranes and with isolated intact chloroplasts.2. The pH dependence of the electrophoretic mobility indicated that at pH values above 4.3 both membrane systems carry a net negative charge.3. Chemical treatment of thylakoids has shown that neither the sugar residues of the galactolipids in the membrane nor the basic groups of the membrane proteins having pK values between 6 and 10 are exposed at the surface.4. However, treatment with 1-ethyl-3(3-dimethylaminopropyl)carbodiimide, together with glycine methyl ester, neutralized the negative charges on the thylakoid membrane surface indicating the involvement of carboxyl groups which, because of their pH sensitivity, are likely to be the carboxyl groups of aspartic and glutamic acid residues.5. The nature of the protein giving rise to the negative surface charges on the thylakoids is not known but is shown not to involve the coupling factor or the light harvesting chlorophyl achlorophyll bpigment · protein complex.6. No significant effect of light was observed on the electrophoretic mobility of either thylakoids or intact chloroplasts.7. The striking difference in the ability of divalent and monovalent cations to screen the surface charges was demonstrated and explained in terms of the Gouy-Chapman theory.8. Calculations of the ζ-potentials for thylakoid membranes gave values for the charge density at the plane of shear to be in the region of one electronic charge per 1500–2000 Å2.9. The significance of the results is discussed in terms of cation distribution in chloroplasts and the effect of cations on photosynthetic phenomena.  相似文献   

12.
The crystal structures of L -3,4-dehydroproline, t-butoxycarbonyl-L -3,4-dehydroproline amide, and acetyl-L -3,4-dehydroproline amide have been determined. L -3,4-Dehydroproline is orthorhombic with a = 16.756, b = 5.870, c = 5.275 Å, and Z = 4; t-butoxycarbonyl-L -3,4-dehydroproline amide is orthorhombic with a = 6.448, b = 8.602, c = 21.710 Å, and Z = 4; acetyl-L -3,4-dehydroproline amide is monoclinic with a = 4.788, b = 10.880, c = 7.785 Å, β = 105.25°, and Z = 2. The final R value for the L -3,4-dehydroproline is 0.046 based on 529 reflections; for t-butoxycarbonyl-L -3,4-dehydroproline amide, 0.050 based on 792 reflections; and for acetyl-L -3,4-dehydroproline amide, 0.058 based on 632 reflections. The structures clearly establish that the free amino acid exists in the zwitterionic form in the crystalline state. The molecular conformations of the t-Boc and acetyl derivatives consist of two planes: one involving the primary amide and the other the remaining atoms of the molecule. The acetyl-L -3,4-dehydroproline amide contains a tertiary amide bond in the cis conformation. To the best of our knowledge, this is the first example of a cis bond in an acetyl derivative of an amino acid or peptide. At variance with the previously reported proline amides, which present ? and ψ values corresponding to those of a right-handed α-helical conformation (conformation A), the t-Boc and acetyl derivatives both have ? and ψ values corresponding to a collagenlike conformation (conformation F).  相似文献   

13.
Paired sedimentation studies of isolated, native thick filaments at pH 6.8, I = 0.12 and in the presence of 0.3 mm-free Mg2+ show that the sedimentation coefficient increases with Ca2+ concentration (pCa2 midpoint = 5.5), leveling off at pCa 4.7. The addition of ATP or ADP (5 mm) has no effect on the hydrodynamic changes induced by Ca2+. At much higher free Mg2+ concentrations (5 mm), the midpoint of the transition is shifted to pCa = 5.3. Viscosity measurements of the filament system under comparable conditions reveal a decrease in the relative viscosity over the same range of Ca2+ concentration. Synthetic filaments prepared from purified myosin free of C-protein also show the same behavior. Native filaments from which myosin heads have been removed by treatment with papain do not show Ca2+ dependence. The dependence of the sedimentation coefficient of filament on protein concentration, as measured by differential sedimentation, is unaffected by Ca2+, indicating that the changes in hydrodynamic properties are probably not related to aggregation of the filaments. The Ca2+ effects are reversible and are not observed on replacing Ca2+ by Mg2+. Binding studies carried out at low ionic strength reveal two binding sites for Ca2+ (Ka = 1.7 × 105m?1) per mole myosin within the filament and evidence is presented showing that the DTNB light chain is the site of binding. The combined results are interpreted as indicating that thick filaments of vertebrate muscle undergo conformational changes at physiological levels of Ca2+ and provide evidence for a Ca2+-sensitive regulatory mechanism at the level of the thick filament.  相似文献   

14.
M. Fujii  K. Honda  H. Fujita 《Biopolymers》1973,12(5):1177-1195
Measurements of light scatting, sedimentation equilibrium, sedimentation velocity, and viscosity were carried out on fractions of native amylose in dimethylsulfoxide at 25°C. The data for statistical radius as a function of weight-average molecular weight Mw suggested a stiff nature of this biopolymer in the solvent studied when interpreted in terms of Kirste's recent calculations with a stiff chain model. The data for sedimentation coefficient were consistent with this suggestion, and when analyzed in terms of the theory Hearst and Stockmayer for wormlike chain, a value of 233 Å2 was obtainedd for a/λ, where a is the length of a monomer unit projected on the chain axis and (2λ)?1is the persistence length of the wormlike chain. The intrinsic viscosity data gave a high a value as 0.91 for the exoponent in the Houwink-Mark-Sakuarada equation, in Substantial agreement with Cowie's prenious work. We attempted to interpret these data by use of the Eizner-Ptitsyn equation for wormlike chains, with omission of the free-drainage term and introduction of the a/λ value obtained from sedimentation data. It was found that, except in the region of Mw above one million, the observed values were fitted well by the E-P theory with a = 1.4 Å and (2λ)?1 = 87 Å. The disagreement in the high-molecular-weight region was tentatively attributed to excluded volume effect. The a value obtained suggests that the molecular conformation of amylose in dimethylsulfoxide is predominantly helical, in contrast to that of the same polymer in aqueous solutions of simple electrolyte. It was also found that a similar value of a was derived from our data for the second virial coefficient and partial specific volume if the molecule was assumed to be essentially rodlike.  相似文献   

15.
A comparison of electrophoretic patterns of F1 and backcross progeny of two inbred strains of mice has revealed a new autosomal variant of the mitochondrial form of GOT. The loci controlling the production of the soluble and mitochondrial forms of GOT have been designated Got-1 and Got-2, respectively. The two alleles of the Got-2 locus have been designated Got-2 a and Got-2 b, which represent the slow- and fast-migrating electrophoretic forms. Twenty-seven inbred strains of mice have been classified for Got-2 a and Got-2 b. It has been demonstrated that the polymorphism of Got-2 is widely distributed in feral mice. Got-2 was shown to be linked to Es-1, and evidence is also presented for linkage between Got-2 and Es-2, Es-5, and oligosyndactyly (Os). The absence of linkage of Got-2 to seven other loci has also been demonstrated. GOT was expressed in vitro in cell lines derived from human and mouse tissues.  相似文献   

16.
A new synthesis of cis-dichlorobis(methylamine)platinum(II) is described. It appears that during the crystallization process at least two types of crystals are formed. Form A is monoclinic with space group P2 1/n and unit cell dimensions a = 6.272, b = 15.726, c = 7.419Å, β = 99.86°, V = 721Å 3, Z = 4, R = 0.055. Form B is monoclinic, with space group P2 1/c and unit cell dimensions a = 16.078, b = 6.372, c = 21.459Å, β = 92.7°, V = 2196Å 3, Z = 12, R = 0.057. The two forms can be readily distinguished by IR spectroscopy.  相似文献   

17.
The sequences of alleles Gpil-s a and Gpi1-s b at the glucose phosphate isomerase structural locus have been determined from cDNA of the mouse inbred strains 101/H Gpi1-s a and C3H/HeH Gpi1-s b by TR PCR and direct sequencing of the amplified products. Four individual nucleotide differences were observed between the two alleles. The difference at amino acid residue 94, (Gpi1-s a GAT Asp, Gpi1-s b AAT Asn) may account for the differing electrophoretic migration, isoelectric point, and thermostability of the two alleles. Two of the other observed differences in the coding region (amino acid residue 12 Leu, Gpi1-s a CTC, Gpi1-s b CTG and amino acid residue 17 Arg, Gpi1-s a CGC, Gpi1-s b CGT) are silent and do not affect the predicted amino acid residues on translation. The fourth observed difference is located within the 3 noncoding sequences of the cDNA. The change at amino acid residue 94 is associated with the presence of a Hinf1 restriction site in Gpi1-s b, which is absent in Gpi1-s a, and may be a useful method for determining this marker.  相似文献   

18.
The precise architecture of hair bundles, the arrays of mechanosensitive microvilli-like stereocilia crowning the auditory hair cells, is essential to hearing. Myosin IIIa, defective in the late-onset deafness form DFNB30, has been proposed to transport espin-1 to the tips of stereocilia, thereby promoting their elongation. We show that Myo3a−/−Myo3b−/− mice lacking myosin IIIa and myosin IIIb are profoundly deaf, whereas Myo3a-cKO Myo3b−/− mice lacking myosin IIIb and losing myosin IIIa postnatally have normal hearing. Myo3a−/−Myo3b−/− cochlear hair bundles display robust mechanoelectrical transduction currents with normal kinetics but show severe embryonic abnormalities whose features rapidly change. These include abnormally tall and numerous microvilli or stereocilia, ungraded stereocilia bundles, and bundle rounding and closure. Surprisingly, espin-1 is properly targeted to Myo3a−/−Myo3b−/− stereocilia tips. Our results uncover the critical role that class III myosins play redundantly in hair-bundle morphogenesis; they unexpectedly limit the elongation of stereocilia and of subsequently regressing microvilli, thus contributing to the early hair bundle shaping.  相似文献   

19.
Three electrophoretic variants of plasma esterase in the albumin zone, presumably carboxylesterase, have been demonstrated in 250 rats representing a laboratory population of Wistar rats. Electrophoretic variants of the enzyme are believed to be controlled by two codominant alleles at the autosomal locus referred to as Es-2. The variant of carboxylesterase represented by a fast-migrating single band on starch gel electrophoresis is determined by the gene named Es-2 a, whereas the slow-migrating variant, represented by two bands, is under control of the allelic gene Es-2 b. Animals with Es-2 a/Es-2 b genotype have three bands of carboxylesterase in the albumin zone. Genetically determined polymorphism of plasma esterase, presumably carboxylesterase, in the prealbumin zone was shown in both laboratory and wild populations of rats. Breeding tests suggest that the gene referred to as Es-1 a, responsible for the presence of carboxylesterase in the prealbumin zone, is inherited dominantly, whereas animals homozygous for the allele Es-1 b locked this esterase fraction.  相似文献   

20.
In this paper, we use density functional theory to study the effect of the charge of solvophilic beads and concentration on the mesoscale structures of polyelectrolyte solution. The polyelectrolyte A6B12A6 was selected as the triblock polymer, and the solvophobic B blocks have no charges, while the solvophilic A blocks are charged. The simulation results showed: at higher concentration (above 50% systems), relatively small charges on the solvophilic block do not alter the bicontinuous phase inherent to uncharged solution, but at moderate concentrations (50% system), even though the charge per solvophilic bead is very small, the order lamellar structures become disturbed. Figure The density slice of A block in A6B12A6 solution at dimensionless time τ=5,000. 2D cut through the middle of the box shown in Fig. 2a for a (z orientation) and b (y orientation); in Fig. 2g for c (z orientation) and d (y orientation); and for 80% system with the charge of z A =0.5 for e (z orientation) and d (y orientation)  相似文献   

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