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1.
The whole cell tyrosine phenol-lyase (TPL, E.C. 4.1.99.2) activity of Erwinia herbicola (ATCC 21434) was microen-capsulated. We studied the use of this for the conversion of ammonia and pyruvate along with phenol or catechol, respectively, into L-tyrosine or dihydroxyphenyl-L-alanine (L-dopa). The reactions are relevant to the development of new methods for the production of L-tyrosine and L-dopa. The growth of E. herbicola at temperatures from 22 degrees C to 32 degrees C is stable, since at these temperatures the cells grow up to the stationary phase and remain there for at least 10 h. At 37 degrees C the cells grow rapidly, but they also enter the death phase rapidly. There is only limited growth of E. herbicola at 42 degrees C. Whole cells of E. herbicola were encapsulated within alginate-polylysine-alginate microcapsules (916 +/- 100 mum, mean +/- std. dev.). The TPL activity of the cells catalyzed the production of L-tyrosine or dihydroxyphenyl-L-alanine (L-dopa) from ammonia, pyruvate, and phenol or catechol, respectively. In the production of tyrosine, an integrated equation based on an ordered ter-uni rapid equilibrium mechanism can be used to find the kinetic parameters of TPL. In an adequately stirred system, the apparent values of-the kinetic parameters of whole cell TPL are equal whether the cells are free or encapsulated. The apparent K(M) of tyrosine varies with the amount of whole cells in the system, ranging from 0.2 to 0.3 mM. The apparent K(M) for phenol is 0.5 mM. The apparent K(M) values for pyruvate and ammonia are an order of magnitude greater for whole cells than they are for the cell free enzyme. (c) 1995 John Wiley & Sons, Inc. 相似文献
2.
Yasurou Kurusu Makiko Fukushima Keiko Kohama Miki Kobayashi Masato Terasawa Hidehiko Kumagai Hideaki Yukawa 《Biotechnology letters》1991,13(11):769-772
Summary The tyrosine phenol lyase (TPL) gene was cloned from the genomic DNA of aEscherichia intermedia strain and the nucleotide sequence of the TPL structural gene was determined. The 1801 bpHincll-Nrul DNA fragment containing the TPL gene had an open reading frame of 1368 bp and the deduced amino acid sequence was 456 residues long with a molecular weight of 51,441 daltons. 相似文献
3.
Xiao-Ling Tang Zhi-Chao Wang Jian Yang Yu-Guo Zheng 《Preparative biochemistry & biotechnology》2013,43(2):117-126
AbstractTyrosine phenol lyase (TPL) is a robust biocatalyst for the production of L-dihydroxyphenylalanine (L-DOPA). The improvement of TPL production is conducive to the industrial potential. In this study, the optimization of culture medium of recombinant Escherichia coli harboring TPL from Fusobacterium nucleatum (Fn-TPL) was carried out. Sucrose and combination of yeast extract and peptone were selected as carbon and nitrogen source, respectively. Their optimal concentrations were determined by Box-Behnken design and the synergistic effect between yeast extract and peptone was found to be significant, with p-value < 0.05. The DO-STAT fed-batch fermentation under optimized culture condition was established and the oxygen level was fixed at 20%. Both the biomass and Fn-TPL activity were significantly increased, which were 35.6 g dcw/L and 12292 U/L, respectively. The results obtained significantly promote the industrial production of L-DOPA production. 相似文献
4.
Tang Xiao-Ling Liu Xiao Suo Hui Wang Zhi-Chao Zheng Ren-Chao Zheng Yu-Guo 《Bioprocess and biosystems engineering》2018,41(9):1347-1354
Bioprocess and Biosystems Engineering - The tyrosine phenol lyase (TPL) catalyzed synthesis of L-DOPA was regarded as one of the most economic route for L-DOPA synthesis. In our previous study, a... 相似文献
5.
pH dependencies of the main kinetic parameters for the reaction of tyrosine phenol-lyase (TPL) with L-tyrosine were studied earlier at pH from 6.0 to 9.5. At this range, L-tyrosine, whose pK(a) for the phenol hydroxyl is 10.5, exists as the zwitterion. It was concluded that zwitterion is the only "active" form for any tyrosine-like substrate. In the present work, we examined pH dependencies for 2-fluorotyrosine, 3-fluorotyrosine, 3,5-difluorotyrosine, 2,5-difluorotyrosine, 2,6-difluorotyrosine, and 3-chlorotyrosine which are more acidic than tyrosine. Respective pK(a)'s are 9.2, 8.7, 7.3, 7.9, 8,35, and 8.3. At higher pH, most of these substrates exist predominantly as anions, having two negative charges at the carboxylic and phenol groups, and one positive charge at the amino group. No decrease of k(cat)/K(m) values attributable to acidic dissociation of the phenol group was found. From comparison of theoretical curves with the experimental data, we conclude that most likely, both zwitterion and anion forms of 3-fluorotyrosine, 3,5-difluorotyrosine, 2,5-difluorotyrosine, 2,6-difluorotyrosine, and 3-chlorotyrosine may be bound and subsequently catalytically transformed by TPL. The reactivities of the two forms are quite comparable. The roles of catalytic groups in the active site, especially Arg381 and Thr-124, are discussed. 相似文献
6.
Tyrosine phenol-lyase (TPL) and tryptophan indole-lyase (Trpase) catalyse the reversible hydrolytic cleavage of L-tyrosine or L-tryptophan to phenol or indole, respectively, and ammonium pyruvate. These enzymes are very similar in sequence and structure, but show strict specificity for their respective physiological substrates. We have mutated the active site residues of TPL (Thr(124), Arg(381), and Phe(448)) to those of Trpase and evaluated the effects of the mutations. Tyr(71) in Citrobacter freundii TPL, and Tyr(74) in E. coli Trpase, are essential for activity with both substrates. Mutation of Arg(381) of TPL to Ala, Ile, or Val (the corresponding residues in the active site of Trpase) results in a dramatic decrease in L-Tyr beta-elimination activity, with little effect on the activity of other substrates. Arg(381) may be the catalytic base with pK(a) of 8 seen in pH-dependent kinetic studies. T124D TPL has no measureable activity with L-Tyr or 3-F-L-Tyr as substrate, despite having high activity with SOPC. T124A TPL has very low but detectable activity, which is about 500-fold less than wild-type TPL, with L-Tyr and 3-F-L-Tyr. F448H TPL also has very low activity with L-Tyr. None of the mutant TPLs has any detectable activity with L-Trp as substrate. H463F Trpase also exhibits low activity with L-Trp, but retains high activity with other substrates. Thus, additional residues remote from the active site may be needed for substrate specificity. Both Trpase and TPL may react by a rare S(E)2-type mechanism. 相似文献
7.
The effect of the presence of more easily degradable alternative carbon sources on the biodegradation of toxic waste components is of great practical importance. In this work, a mixed phenol/glucose waste was fed to two heterogeneous populations acclimated to different conditions: one was acclimated to phenol as a sole source of carbon and one to a mixed phenol/glucose substrate. Batch substrate utilization experiments were performed under both growth and nonproliferating (no medium nitrogen source) conditions in order to assess substrate removal patterns at the levels of enzyme production and enzyme function. The results indicated that the substrate removal pattern exhibited by the cells was significantly influenced by the acclimation characteristics of the culture. The phenol acclimated cells showed an initial preference for phenol, but the presence of glucose hindered phenol removal rate under both growth and nonproliferating conditions. The cells acclimated to the mixed phenol/glucose waste demonstrated rapid initial glucose removal with a slower concomitant utilization of phenol; acclimation to the mixed waste evidently had a significant impact on the substrate removal pattern for this mixed substrate system. 相似文献
8.
Tyrosine phenol-lyase (TPL) from Citrobacter freundii is a pyridoxal 5'-phosphate (PLP)-dependent enzyme that catalyzes the reversible hydrolytic cleavage of l-Tyr to give phenol and ammonium pyruvate. The proposed reaction mechanism for TPL involves formation of an external aldimine of the substrate, followed by deprotonation of the alpha-carbon to give a quinonoid intermediate. Elimination of phenol then has been proposed to give an alpha-aminoacrylate Schiff base, which releases iminopyruvate that ultimately undergoes hydrolysis to yield ammonium pyruvate. Previous stopped-flow kinetic experiments have provided direct spectroscopic evidence for the formation of the external aldimine and quinonoid intermediates in the reactions of substrates and inhibitors; however, the predicted alpha-aminoacrylate intermediate has not been previously observed. We have found that 4-hydroxypyridine, a non-nucleophilic analogue of phenol, selectively binds and stabilizes aminoacrylate intermediates in reactions of TPL with S-alkyl-l-cysteines, l-tyrosine, and 3-fluoro-l-tyrosine. In the presence of 4-hydroxypyridine, a new absorption band at 338 nm, assigned to the alpha-aminoacrylate, is observed with these substrates. Formation of the 338 nm peaks is concomitant with the decay of the quinonoid intermediates, with good isosbestic points at approximately 365 nm. The value of the rate constant for aminoacrylate formation is similar to k(cat), suggesting that leaving group elimination is at least partially rate limiting in TPL reactions. In the reaction of S-ethyl-l-cysteine in the presence of 4-hydroxypyridine, a subsequent slow reaction of the alpha-aminoacrylate is observed, which may be due to iminopyruvate formation. Both l-tyrosine and 3-fluoro-l-tyrosine exhibit kinetic isotope effects of approximately 2-3 on alpha-aminoacrylate formation when the alpha-(2)H-labeled substrates are used, consistent with the previously reported internal return of the alpha-proton to the phenol product. These results are the first direct spectroscopic observation of alpha-aminoacrylate intermediates in the reactions of TPL. 相似文献
9.
AIMS: This paper attempts to investigate the inhibition of phenol on the acetate utilization in acetate-fed aerobic granular sludge culture. METHODS AND RESULTS: Acetate-fed aerobic granules with a mean diameter of 1.0 mm were predeveloped in a column sequencing aerobic sludge blanket reactor. The present study looked into the utilization kinetics of acetate by acetate-fed aerobic granules in the presence of different phenol concentrations ranging from 0 mg l(-1) to 50 mg l(-1). For this purpose, batch experiments were conducted at 25 degrees C, while the initial biomass and acetate concentrations were in a range of 109-186 mg mixed liquor suspended solids (MLSS) l(-1) and 185-300 mg acetate-chemical oxygen demand (COD) l(-1). Results showed that the utilization of acetate in the presence of phenol was subject to a zero-order reaction kinetics. The relative phenol concentration in terms of the ratio of initial phenol concentration (C(p)) to initial biomass concentration (X(0)) was used to describe the real inhibitory strength of phenol imposed on acetate-fed aerobic granules. When the C(p)/X(0) ratio increased from 0 to 0.19 mg phenol mg(-1) MLSS, the zero-order reaction rate constant of acetate dropped from 1.15 mg l(-1) min(-1) to 0.38 mg l(-1) min(-1), and a similar trend was also observed in specific oxygen utilization rate. As compared to the control test without addition of phenol, the acetate-COD removal efficiency was reduced by nearly 50% at a C(p)/X(0) value of 0.19 mg phenol mg(-1) MLSS. It was found that biodegradation of phenol was negligible in acetate-fed aerobic granular sludge batch culture. CONCLUSIONS: It appears that phenol can seriously repress the utilization of acetate in the acetate-fed aerobic granular sludge batch cultures. A simple zero-order reaction model could adequately describe the utilization of acetate by acetate-fed aerobic granules in the presence of phenol. SIGNIFICANCE AND IMPACT OF THE STUDY: It is expected that this study would lead to a better understanding of the behaviour of acetate-fed aerobic granules in the presence of inhibitory organic compounds. 相似文献
10.
Tyrosine phenol-lyase (TPL) from Citrobacter freundii is activated about 30-fold by monovalent cations, the most effective being K(+), NH(4)(+), and Rb(+). Previous X-ray crystal structure analysis has demonstrated that the monovalent cation binding site is located at the interface between subunits, with ligands contributed by the carbonyl oxygens of Gly52 and Asn262 from one chain and monodentate ligation by one of the epsilon-oxygens of Glu69 from another chain [Antson, A. A., Demidkina, T. V., Gollnick, P., Dauter, Z., Von Tersch, R. L., Long, J., Berezhnoy, S. N., Phillips, R. S., Harutyunyan, E. H., and Wilson, K. S. (1993) Biochemistry 32, 4195]. We have studied the effect of mutation of Glu69 to glutamine (E69Q) and aspartate (E69D) to determine the role of Glu69 in the activation of TPL. E69Q TPL is activated by K(+), NH(4)(+), and Rb(+), with K(D) values similar to wild-type TPL, indicating that the negative charge on Glu69 is not necessary for cation binding and activation. In contrast, E69D TPL exhibits very low basal activity and only weak activation by monovalent cations, even though monovalent cations are capable of binding, indicating that the geometry of the monovalent cation binding site is critical for activation. Rapid-scanning stopped-flow kinetic studies of wild-type TPL show that the activating effect of the cation is seen in an acceleration of rates of quinonoid intermediate formation (30-50-fold) and of phenol elimination. Similar rapid-scanning stopped-flow results were obtained with E69Q TPL; however, E69D TPL shows only a 4-fold increase in the rate of quinonoid intermediate formation with K(+). Preincubation of TPL with monovalent cations is necessary to observe the rate acceleration in stopped flow kinetic experiments, suggesting that the activation of TPL by monovalent cations is a slow process. In agreement with this conclusion, a slow increase (k < 0.5 s(-)(1)) in fluorescence intensity (lambda(ex) = 420 nm, lambda(em) = 505 nm) is observed when wild-type and E69Q TPL are mixed with K(+), Rb(+), and NH(4)(+) but not Li(+) or Na(+). E69D TPL shows no change in fluorescence under these conditions. High concentrations (>100 mM) of all monovalent cations result in inhibition of wild-type TPL. This inhibition is probably due to cation binding to the ES complex to form a complex that releases pyruvate slowly. 相似文献
11.
Simultaneous chromium reduction and phenol degradation in a coculture of Escherichia coli ATCC 33456 and Pseudomonas putida DMP-1.
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In a defined coculture of a Cr(VI) reducer, Escherichia coli ATCC 33456, and a phenol degrader, Pseudomonas putida DMP-1, simultaneous reduction of Cr(VI) and degradation of phenol was observed. When Cr(VI) was present in the coculture, quantitative transformation of Cr(VI) into Cr(III) proceeded with simultaneous degradation of phenol. Cr(VI) reduction was correlated to phenol degradation in the coculture as demonstrated by a regression analysis of the cumulative Cr(VI) reduction and the cumulative phenol degradation. Both the rate and extent of Cr(VI) reduction and phenol degradation were significantly influenced by the population composition of the coculture. Although Cr(VI) reduction occurred as a result of E. coli metabolism, the rate of phenol degradation by P. putida may become a rate-limiting factor for Cr(VI) reduction at a low population ratio of P. putida to E. coli. Phenol degradation by P. putida was very susceptible to the presence of Cr(VI), whereas Cr(VI) reduction by E. coli was significantly influenced by phenol only when phenol was present at high concentrations (> 9 mM). 相似文献
12.
J A Buswell 《Journal of bacteriology》1975,124(3):1077-1083
An obligate thermophilic strain of Bacillus stearothermophilus, strain PH24, isolated from industrial sediment by elective culture, grew readily at 55 C on phenol or on one of the isomers of cresol as the major carbon source. Intact cells grown in the presence of phenol, o-cresol, m-cresol, or p-cresol were induced to oxidize, without lag, these substrates together with catechol, 3-methylcatechol, and 4-methylcatechol. Cell extracts prepared from B. stearothermophilus PH24 after growth in the presence of phenol converted phenol to catechol with a concomitant uptake of 1 mol of oxygen per mol of substrate in reaction mixtures supplemented with reduced nicotinamide adenine dinucleotide. These preparations also catalyzed the oxidation of o-cresol to 3-methylcatechol and of m-cresol and p-cresol to 4-methylcatechol. Enzyme activity was inhibited by 1 mM p-chloromercuribenzoate and by 0.1 mM 0-phenanthroline. Catechol and the corresponding methylcatechol intermediates were further dissimilated by cell extracts of phenol-grown cells via the meta-cleavage route to yield 2-hydroxymuconic semialdehyde and the respective methylated derivatives. 相似文献
13.
van den Berg C Wierckx N Vente J Bussmann P de Bont J van der Wielen L 《Biotechnology and bioengineering》2008,100(3):466-472
The sustainable production of fine/bulk chemicals is often hampered by product toxicity and inhibition to the producing micro-organisms. Consequently, the product must be removed from the micro-organisms' environment. To achieve this, so-called solvent-impregnated resins (SIRs) as well as commercial resins have been added to a Pseudomonas putida S12TPL fermentation that produces phenol as a model compound from glucose. The SIRs contained an ionic liquid which extracts phenol effectively. It was observed that the addition of these particles resulted in an increased phenol production of more than a fourfold while the commercial resin (XAD-4) which is widely used in aromatic removal from aqueous phases, only gave a 2.5-fold increase in volumetric production. 相似文献
14.
A continuous-feed recycle bioreactor was used to study the kinetics of methanogenic degradation of phenol at 35 degrees C by bacteria supported on a bed of granular activated carbon (GAC). At dilution rates well above the growth rate of the culture, the cells not only populated the GAC, but also formed a layer of granular biomass. This layer was stabilized by the presence of the GAC, and accounted for over half of the phenol-degrading activity in the bioreactor. The specific phenol degradation rates for GAC-attached biomass, suspended biomass, and granular biomass were all in the range 0.15 to 0.22 mg phenol/mg volatile solids per day as measured under pseudo-steady-state conditions. (c) 1992 John Wiley & Sons, Inc. 相似文献
15.
Summary The soil yeast Trichosporon cutaneum was grown in continuous culture on phenol, acetate or glucose as sole carbon source. The activities of enzymes participating in the tricarboxylic acid cycle, glyoxylate cycle, 3-oxoadipate pathway, pentose phosphate pathway and glycolysis were determined in situ during shifts of carbon sources. Cells grown on phenol or glucose contained basal activity of the glyoxylate-cycle-specific isocitrate lyase. The derepression of the glyoxylate cycle enzymes was partly hindered in the presence of phenol but not in the presence of low levels of glucose. Phenol and glucose caused repression of isocitrate lyase. In the presence of either phenol or glucose, acetate accumulation in the medium increased. However, part of the supplied acetate was utilized simultaneously with phenol or glucose, the utilization rate of either carbon source being reduced in the presence of the other carbon source. Acetate caused repression but not inactivation of the phenol-degrading enzymes, phenol hydroxylase and catechol 1,2-dioxygenase. The simultaneous utilization of phenol and other carbon sources in continuous culture as well as the observed repression-derepression patterns of the involved enzymes reveal T. cutaneum to be an organism of interest for possible use in decontamination processes.
Offprint requests to: H. Y. Neujahr
Offprint requests to: H. Y. Neujahr 相似文献
16.
Letowski J Juteau P Villemur R Duckett MF Beaudet R Lépine F Bisaillon JG 《Canadian journal of microbiology》2001,47(5):373-381
In a culture converting phenol to benzoic acid under anaerobic conditions and previously described as being constituted of only a Clostridium-like strain 6, another bacterium (strain 7) was observed. Each organism was enriched by centrifugation on a Percoll gradient. Strain 6 was purified by dilution and plating. Strain 7 did not grow on solid media, but a strain 7 culture, cleared of strain 6, was obtained by subculturing in the presence of ampicillin and by dilution. In fresh medium, phenol was transformed by the reconstituted co-culture but not by each strain alone. In a supernatant from a co-culture or from a strain 6 culture, strain 7 alone transformed phenol but not strain 6. Maintenance of an active strain 7 in fresh medium instead of co-culture supernatant became possible when phenol was replaced by 4-hydroxybenzoate (4-OHB), which is decarboxylated to phenol before being transformed to benzoate. Even with 4-OHB, the use of co-culture (or strain 6 culture) supernatant resulted in faster transformation activity and growth rate. A phylogenetic analysis placed strain 7 in a cluster of uncultivated or nonisolated bacteria (92-96% homology). Strain 7 is also related to Desulfotomaculum, Desulfitobacterium, Desulfosporosinus, Moorella, and Sporotomaculum genera (87-92% homology). 相似文献
17.
Kar S. Swaminathan T. Baradarajan A. 《World journal of microbiology & biotechnology》1997,13(6):659-663
The Arthrobacter species can degrade phenol, o-cresol and p-cresol much faster (as reflected in high specific growth rates) than other microbes which are reported to degrade toxic compounds. In mixtures, phenol and p-cresol mutually inhibited each other; the inhibition constants show that phenol degradation is strongly inhibited in the presence of p-cresol rather than reverse. o-Cresol enhanced phenol degradation marginally but o-cresol degradation was not affected by the presence of phenol. 相似文献
18.
19.
The kinetics of phenol degradation was estimated in a fed-batch reactor system. Effects of oxygen and nutrient excess or limitation
as well as the presence of several essential ions on the phenol- and oxygen-specific uptake rates achieved simultaneously
in a bioreactor were shown.Candida tropicalis was grown on phenol as the only carbon and energy source. Applying the best fit of polynomial function, the maximum specific
uptake rates of phenol and oxygen, the critical concentrations of phenol, the half-saturation constants and inhibition constants
were determined. Linear relationship between specific phenol uptake rate and the exogenous respiration rate was found regardless
of the kind and presence of essential nutrients. At oxygen limitation both the phenol uptake rate and the cell affinity to
phenol decreased more strongly compared with those under nutrient limitation. Oxygen in excess resulted in a significant increase
of cell tolerance toward phenol. The presence of essential nutrients increased the specific phenol degradation rate and led
to complete phenol oxidation. 相似文献
20.
Summary Anaerobic methanogenesis of phenol using mixed cultures derived from cow dung and municipal sewage sludge and adapted to phenol was done in batch reactors. The phenol degradation rate depended on the period in which the culture was acclimated to phenol. Interference in phenol uptake by glucose was observed. Consumption of both phenol and acetic acid was observed when an acetate-adapted culure was used. A phenol-acclimated culture was able to degrade dihydroxy phenols thus indicating the feasibility of cross-acclimation.
Offprint requests to: P. Ghosh 相似文献