Eye shape and activity pattern in birds

Many aspects of an animal's ecology are associated with activity pattern, the time of day when that animal is awake and active. There are two major activity patterns: diurnal , active during the day in a light-rich, or photopic, environment, and nocturnal , active after sunset in a light-limited, or scotopic, environment. Birds are also cathemeral , or equally likely to be awake at any time of day, or crepuscular , awake and active at dawn and dusk. Each of these activity patterns is associated with different levels of ambient light. This study examines how the morphology (size and shape) of the eye varies according to these different light environments for birds in a phylogenetic context. Activity pattern has a significant influence on eye shape and size in birds. Birds that are adapted for scotopic vision have eye shapes that are optimized for visual sensitivity, with larger corneal diameters relative to axial lengths. Birds that are adapted for photopic vision have eye shapes that are optimized for visual acuity, with larger axial lengths relative to corneal diameters. Birds adapted for scotopic vision also exhibit absolutely larger corneal diameters and axial lengths than do photopic birds. The results indicate that the light level under which the bird functions has a more significant influence on eye shape than phylogeny.     

Dynamics of Mara–Serengeti ungulates in relation to land use changes

Caudal autotomy, the ability to shed the tail, is common in lizards as a response to attempted predation. Since Arnold's substantial review of caudal autotomy as a defence in reptiles 20 years ago, our understanding of the costs associated with tail loss has increased dramatically. In this paper, we review the incidence of caudal autotomy among lizards (Reptilia Sauria) with particular reference to questions posed by Arnold. We examine tail break frequencies and factors that determine occurrence of autotomy in natural populations (including anatomical mechanisms, predation efficiency and intensity, microhabitat preference, sex and ontogenetic differences, as well as intraspecific aggression). We also summarize the costs associated with tail loss in terms of survivorship and reproduction, focusing on potential mechanisms that influence fitness (i.e. locomotion costs, behavioural responses and metabolic costs). Finally, we examine the factors that may influence the facility with which autotomy takes place, including regeneration rate, body form and adaptive behaviour. Taking Arnold's example, we conclude with proposals for future research.     

On caudal prehensility and phylogenetic constraint in lizards: The influence of ancestral anatomy on function in Corucia and Furcifer

We examined caudal anatomy in two species of prehensile‐tailed lizards, Furcifer pardalis and Corucia zebrata. Although both species use their tails to grasp, each relies on a strikingly different anatomy to do so. The underlying anatomies appear to reflect phylogenetic constraints on the consequent functional mechanisms. Caudal autotomy is presumably the ancestral condition for lizards and is allowed by a complex system of interdigitating muscle segments. The immediate ancestor of chameleons was nonautotomous and did not possess this specialized anatomy; consequently, the derived arrangement in the chameleon tail is unique among lizards. The limb functions as an articulated linkage system with long tendinous bands originating from longitudinal muscles to directly manipulate vertebrae. Corucia is incapable of autotomy, but it is immediately derived from autotomous ancestors. As such, it has evolved a biomechanical system for prehension quite different from that of chameleons. The caudal anatomy in Corucia is very similar to that of lizards with autotomous tails, yet distinct differences in the ancestral pattern and its relationship to the subdermal tunic are derived. Instead of the functional unit being individual autotomy segments, the interdigitating prongs of muscle have become fused with an emphasis on longitudinal stacks of muscular cones. The muscles originate from the vertebral column and a subdermal collagenous tunic and insert within the adjacent cone. However, there is remarkably little direct connection with the bones. The muscles have origins more associated with the tunic and muscular septa. Like the axial musculature of some fish, the tail of Corucia utilizes a design in which these collagenous elements serve as an integral skeletal component. This arrangement provides Corucia with an elegantly designed system capable of a remarkable variety of bending movements not evident in chameleon tails. J. Morphol. 239:143–155, 1999. © 1999 Wiley‐Liss, Inc.     

Short-term success of a translocation of Otago skinks (Oligosoma otagense) to Orokonui Ecosanctuary

Natural habitat is not always available for translocations due to habitat modification or pressure from introduced predators. We followed the release of 30 captive-bred Otago skinks (Oligosoma otagense) into a 109?m² outdoor enclosure of artificial habitat at Orokonui Ecosanctuary in southeastern New Zealand. We evaluated the short-term success of the translocation by assessing visibility and survival of the skinks over the 3 summer months following release in spring 2013, plus survival the following spring. Skinks were visible most days, especially in warm, dry conditions. Survival was high over the first summer; 80% of skinks were seen at least once during February 2014. The following spring 63% of skinks were resighted during three surveys and breeding has since been reported. Thus, it is feasible to maintain captive-bred adults of this Nationally Endangered skink in artificially constructed, outdoor habitat in a coastal location. However, to avoid predation of juveniles by adult skinks, future translocations should avoid releasing juveniles close to adults.     

High-resolution X-ray computed tomography of an Early Cretaceous gekkonomorph (Squamata) from Öösh (Övörkhangai; Mongolia)

We describe the braincase of AMNH FR 21444, a gecko-like squamate from the Early Cretaceous of Mongolia, based on high-resolution X-ray computed tomography scans (CT scans) and incorporate it in a phylogenetic analysis of 36 squamate taxa scored for 226 morphological characters. Our analysis corroborates the Eublepharidae-Gekkonoidea split as the basal gekkotan dichotomy, but retrieves Teratoscincus as the sister-taxon to pygopodines + diplodactylines. The combination of plesiomorphic and apomorphic character states within AMNH FR 21444 demonstrates a decoupled evolutionary history between the braincase and the rest of the skull and mandible within gekkonomorph squamates. Enclosure of the lateral head vein and mandibular branch of the trigeminal nerve are both plesiomorphic for gekkonomorphs. The mechanisms responsible for the transition from the plesiomorphic skull roof of basal gekkonomorphs to the modern gekkotan condition cannot be anticipated given the current data.     

Mitochondrial genome of the Komodo dragon: efficient sequencing method with reptile-oriented primers and novel gene rearrangements.

The mitochondrial genome of the Komodo dragon (Varanus komodoensis) was nearly completely sequenced, except for two highly repetitive noncoding regions. An efficient sequencing method for squamate mitochondrial genomes was established by combining the long polymerase chain reaction (PCR) technology and a set of reptile-oriented primers designed for nested PCR amplifications. It was found that the mitochondrial genome had novel gene arrangements in which genes from NADH dehydrogenase subunit 6 to proline tRNA were extensively shuffled with duplicate control regions. These control regions had 99% sequence similarity over 700 bp. Although snake mitochondrial genomes are also known to possess duplicate control regions with nearly identical sequences, the location of the second control region suggested independent occurrence of the duplication on lineages leading to snakes and the Komodo dragon. Another feature of the mitochondrial genome of the Komodo dragon was the considerable number of tandem repeats, including sequences with a strong secondary structure, as a possible site for the slipped-strand mispairing in replication. These observations are consistent with hypotheses that tandem duplications via the slipped-strand mispairing may induce mitochondrial gene rearrangements and may serve to maintain similar copies of the control region.     

A new Early Permian reptile and its significance in early diapsid evolution

The initial stages of evolution of Diapsida (the large clade that includes not only snakes, lizards, crocodiles and birds, but also dinosaurs and numerous other extinct taxa) is clouded by an exceedingly poor Palaeozoic fossil record. Previous studies had indicated a 38 Myr gap between the first appearance of the oldest diapsid clade (Araeoscelidia), ca 304 million years ago (Ma), and that of its sister group in the Middle Permian (ca 266 Ma). Two new reptile skulls from the Richards Spur locality, Lower Permian of Oklahoma, represent a new diapsid reptile: Orovenator mayorum n. gen. et sp. A phylogenetic analysis identifies O. mayorum as the oldest and most basal member of the araeoscelidian sister group. As Richards Spur has recently been dated to 289 Ma, the new diapsid neatly spans the above gap by appearing 15 Myr after the origin of Diapsida. The presence of O. mayorum at Richards Spur, which records a diverse upland fauna, suggests that initial stages in the evolution of non-araeoscelidian diapsids may have been tied to upland environments. This hypothesis is consonant with the overall scant record for non-araeoscelidian diapsids during the Permian Period, when the well-known terrestrial vertebrate communities are preserved almost exclusively in lowland deltaic, flood plain and lacustrine sedimentary rocks.     

Characterization of the Agamid Lizard Genus Uromastyx from Eastern Sudan Based on Morphology,Karyotypes and Mitochondrial DNA

This study focuses on taxonomy of Uromastyx species. Morphologically, U. ocellata and U. ornata were identified and cytogenetically, 2n = 36 chromosome. 16S, cyt b and 12S genes fragmentamplification shows 597, 399 and 450 base pair respectively and more A-T than G-C base pair andmore A/C than T/G base contents. While, sequences blasting in GenBank, followed by construction of phylogenetic tree revealed, 16S and cry b sequences were similar to U. ocellata sequences, andclustered together in phylogenetic tree, in contrast, 12S sequences from same species were related tosubspecies U. ornata ornata sequences and clustered together in the phylogenetic tree. Therefore, the results of this study suggest more studies on Uromastyx species in Sudan.