New internal standards for basic amino acid analyses

Eight derivatives of cysteine and penicillamine with 2- and 4-vinyl-pyridine, p-nitrobenzyl bromide, and p-nitrostyrene were evaluated as potential internal standards for the short and long (physiological) basic columns in amino acid analysis by ion-exchange chromatography. S-β-(4-pyridylethyl)-dl-penicillamine (4-PEP) was found to have an advantage over the previously proposed S-β-(4-pyridylethyl)-l-cysteine (4-PEC) since the elution position of 4-PEP on the short basic column is insensitive to minor changes in pH of the eluting citrate buffer. 4-PEP was found to be stable to acid hydrolysis as used for proteins and its recovery from protein hydrolysates was unaffected by the presence of starch during hydrolysis. However, an extra 14 min is required to elute 4-PEP on the short column.Of the eight compounds studied, six appcar suitable as internal standards on the physiological (long) column. These elute in widely differing positions between histidine and arginine, thus offering a choice of internal standards for special analysis on the basic long column.     

Thiiranium ion intermediates in the formation and reactions of S-(2-haloethyl)-l-cysteines

Thiiranium ions formed from the cysteine or glutathione conjugates of 1,2-dihaloethanes are believed to be responsible for the genotoxicity of the parent alkyl halides. The conversions of specifically deuterated β-hydroxyethyl sulfides to the corresponding β-haloethyl sulfides are studied to provide direct evidence for the involvement of thiiranium ions in the reactions of the cysteine conjugates of 1,2-dihaloethanes. S-(2-Hydroxyethyl-1, 1-d₂)-l-cysteine is converted to an equal mixture of the 1,1-d₂ and 2,2-d₂ isomers of the corresponding S-(2-haloethyl)-l-cysteines in concentrated hydrochloric, hydrobromic, or hydroiodic acids without detectable formation of the 2,2-d₂ isomer of the parent hydroxyethyl derivative. Dissolution of S-(2-hydroxyethyl)-l-cysteine in trifluoromethanesulfonic acid yields a compound with the NMR spectral properties of S-(l-cysteinyl)ethyl thiiranium trifluoromethanesulfonate. The organosoluble S-(2-hydroxyethyl-1,1-d₂) benzyl sulfide is converted to an equal mixture of the 1,1-d₂ and 2,2-d₂ isomers of S-(2-chloroethyl) benzyl sulfide by thionyl chloride or triphenylphosphine: carbon tetrachloride. These results demonstrate the involvement of thiiranium ion intermediates in the conversion of 2-hydroxyethyl sulfides to 2-haloethyl sulfides in halogen acids and a similar symmetrical intermediate in the chlorination reactions effected by thionyl chloride or triphenylphosphine: carbon tetrachloride.     

Reaction of S-(2-amino-2-carboxyethylsulfonyl)-l-cysteine with sulfite: Synthesis of S-sulfo-l-cysteine and l-alanine 3-sulfinic acid and application to the determination of sulfite

A procedure for the simultaneous preparation of S-sulfo-l-cysteine and l-alanine 3-sulfinic acid is described. The method is based on the quantitative reaction between sulfite and S-(2-amino-2-carboxyethylsulfonyl)-l-cysteine. The yield was 95% for S-sulfo-l-cysteine and 91% for l-alanine 3-sulfinic acid. The reaction was also applied to the quantitative determination of sulfite in biological materials. In this procedure, sulfite reacts with S-(2-amino-2-carboxyethylsulfonyl)-l-cysteine. Separation of the reaction product, S-sulfo-l-cysteine, is done by ion-exchange fractionation, and it is determined with acid ninhydrin reagent 2 (M. K. Gaitonde, 1967, Biochem. J.104, 627–663). The recovery was 96.8 ± 0.3%.     

Two cysteine derivatives in asparagus shoots

A mixed dusulfide of S-(2-carboxy-3-mercaptopropyl)-l-cysteine and 3-mercaptoisobutyric acid and the disulfide of S- (2-carboxy-3-mercaptopropyl)cysteine, not previously known in nature, have been isolated from asparagus (Asparagus officinalis) shoots. The former was converted to the latter by reduction with zinc powder in HCl followed by reoxidation with aeration.     

Chiral metal complexes. 25. Cobalt(III) complexes of some linear mesomeric tetramine ligands

The complexes of Λ-α-[Co(R,S-picbn)Cl₂] ClO₄ (where R,S-picbn is 3R,4S-dimethyl-1,6-di(2-pyridyl)-2,5-diazahexane) together with its Δ-Λ-α and Δ,Λ-β exo congeners,Δ-Λ-β-exo-[Co(picchmn)Cl₂] ClO₄ (where picchmn is N,N'-di(2-picolyl)-1R, 2S-diaminocyclohexane) as well as Δ,Λ-β-endo-[Co(R,S-picstien)Cl₂] ClO₄·2H₂O, [Co(R,S-picstien)(ox)] ClO₄·0.5H₂O and [Co(R,S-picstien)(mal)] ClO₄·3H₂O (where picstien is 3R,4S-diphenyl-1,6-di(2-pyridyl)-2,5-diazahexane, ox is the oxalate dianion and mal is the malonate dianion) have been synthesised. The nature of the compounds was determined using a combination of ¹H NMR and, for certain chiral species, chiroptical techniques. In the various β complexes, the tetradentate is observed to adopt either the exo or endo geometry, specifically. Factors which influence coordination geometry include steric interactions and hydrophobic bonding effects.A number of chemical transformations between dinitro and dichloro complexes of Co(III) with R,S- picbn have been examined, as has the reaction of Δ,Λ-β-exo-[Co(R,S-picbn)Cl₂]⁺ with S-alanine in aqueous solution. The resulting product mixture contains eight of the sixteen possible β diastereoisomers, of which three have been isolated and characterised. The eight are composed of four β₁ and four β₂ isomers, however, and it is noted that isomerisation at the inplane amine nitrogen atom is restricted by the overall geometry of the complexes formed. Discriminatory forces in these complexes are small in magnitude, and exo/endo isomerisation is somewhat dependent upon the choice of ligand(s) used to complete the coordination sphere.     

Cysteine Racemization in Peptide Synthesis: A New and Easy Detection Method

A new method has been developed for the rapid determination of D-cysteine contents in synthetic peptides. It is based on the reduction of cystine residues, when present, with tris- alkylphosphines, selective derivatization of the cysteine residues with 4-vinylpyridine, followed by acid hydrolysis of the (4-pyridylethyl)cysteine –peptides. Baseline enantiomeric resolution of theD ,L -S-β-(4-pyridylethyl)cysteine, and thus quantification ofD - enantiomer contents at levels ≤1%, is easily achieved by capillary zone electrophoresis exploiting the host–guest complexation principle with crown ethers or by gas chromatography on chiral glass capillary columns upon conventional derivatization of the hydrolysate. The acid-stability of the (4-pyridylethyl)cysteine derivative prevents racemization via thiazoline intermediates and allows for standardization of the acid hydrolysis-dependent racemization.     

Chiral Metal Complexes. 27. Stereoselectivity in the synthesis and reaction of coordinated aminomalonic acid derivatives

The synthesis is reported of a series of ternary cationic complexes of general form [Co(R,Rpicchxn)(ARMA)⁺ (where picchxn is the N₄ tetradentate N,N′-di(2-picolyl)-1,2-diaminocyclohexane and ARMA is a bidentate α-substituted-α-aminomalonate dianion). The aminomalonic acid (NH₂· C(COOH)₂·R) derivatives investigated have R = -CH₃ (AMMAH₂), -CH₂·CH₃ (AEMAH₂), -CH₂· CH₂·CH₃ (APMAH₂), -CH₂·(CH₂)₂·CH₃ (ABuTMAH₂, -CH₂·C₆H₅ (ABMAH₂), -CH₂·(p-C₆H₄)· C(CH₃)₃ (ABuBMAH₂) and -CH₂·C₁₀H₇ (ANMAH₂). The isomeric species in the complex products have been separated using cation exchange chromatography and each isomer has been characterized using NMR and circular dichroism techniques. In each synthesis the major isomeric product obtained has a Λ-β₁ topology. However, where ARMAH₂ possesses a lengthy alkyl sidechain trace amounts of Δ-α-[Co(R,R-picchxn)(ARMA)]⁺ isomers have been observed during the synthetic reactions. This unusual isomeric form readily undergoes inversion of its absolute configuration in DMSO solution to yield the more thermodynamically stable Λ-β₁-[Co(R,R-picchxn()R-ARMA)]⁺ species stereospecifically.In the case of Λ-β₁-[Co(R,R,-pichxn)(S-APMA)]ClO₄·2NaClO₄·5H₂O the crystal structure has been determined. The compound crystallises in the orthorhombic space group P2₁2₁2₁, with a = 10.056(3),b = 16.475(7),c = 23.370(7)Å and Z = 4. The structure was refined to R = 0.079 for 4460 non-zero reflexions, and confirms the absolute configuration of each chiral centre to be consistent with the NMR and circular dichroism interpretations.The decar☐ylation of these chelate ARMAH₂ derivatives under acid conditions leads to corresponding complexes containing mixtures of coordinated R-andS-α-aminoacids in various ratios. This ratio has been determined in each case, and factors which may influence the degree of chiral induction observed are discussed.     

Identification of a new carbohydrate-binding site of influenza virus

It has recently been shown that the influenza virus can specifically bind the residue of a nonsialylated sulfated oligosaccharide Gal(6SO₃H)β1-4GlcNAcβ (6’SLacNAc). To identify by photoaffinity labeling the virion component that binds 6’SLacNAc, we synthesized a carbohydrate probe containing a ¹²⁵I labeled diazocyclopentadien-2-yl carbonyl group as an aglycone. According to the electrophoretic data, the labeled areas corresponded to a large hemagglutinin subunit, a nucleocapsid protein, and neuraminidase (NA). Probing in the presence of an excess of 6’SLacNAcβ-OCH₂CH₂NHAc glycoside resulted in redistribution of the labeling intensity, with the maximum inhibition being observed for NA. The data obtained indicate that NA is a viral 6’SLacNAc-binding protein.     

Concerning the biosynthesis of prostaglandin I2

Two diastereoisomers, 5R,6R-5-hydroxy-6(9α)-oxido-11α,15S-dihydroxyprost-13-enoic acid (7) and 5S,6S-5-hydroxy-6(9α)-oxido-11α,15S-dihydroxyprost-13-enoic acid (10) were synthesized for evaluation as possible biosynthetic intermediates in the enzymatic transformation of PGH₂ or PGG₂ into PGI₂. The synthetic sequence entails the stereospecific reduction of the 9-keto function in PGE₂ methyl ester after protecting the C-11 and C-15 hydroxyls as tbutyldimethylsilyl ethers. The resulting PGF_2α derivative was epoxidized exclusively at the C-5 (6) double bond to yield a mixture of epoxides, which underwent facile rearrangement with SiO₂ to yield the 5S,6S and 5R,6R-5-hydroxy-6(9α)-oxido cyclic ethers. It was found that dog aortic microsomes were unable to transform radioactive 9β-5S,6S[³H] or 9β-5R,6R[³H]-5-hydroxy-6(9α)-oxido cyclic ethers into PGI₂. Also, when either diastereoisomer was included in the incubation mixture, neither isomer diluted the conversion of [1-¹⁴C]arachidonic acid into [1-¹⁴C]PGI₂.     

2(S),3(S)-3-hydroxy-4-methyleneglutamic Acid from Gleditsia caspica

A new natural product, 2(S),3(S)-3-hydroxy-4-methyleneglutamic acid (G3) has been isolated from seeds of Gleditsia caspica. The structure has been established by chemical and spectroscopic methods. Catalytic reduction of G3 yields 2(S),4(S)-4-methylglutamic acid and a new amino acid, 2(S),3(S),4(S)-3-hydroxy-4-methylglutamic acid. Ozonolysis of G3 followed by oxidation gives 2(S),3(R)-3-hydroxyaspartic acid. The S- (or l-) configurations at C₂ in G3 and in 2(S),3(S),4(S)-3-hydroxy-4-methyglutamic acid and the S-configurations at C₃ for G3 and 2(S),3(S),4(S)-3-hydroxy-4-methylglutamic acid and at C₄ for 2(S),3(S),4(S)-3-hydroxy-4-methylglutamic acid are inferred from the configurations at C₂ in 2(_S),4(_S)-4-methylglutamic acid and at C₂ and C₃ in 2(S),3(R)-3-hydroxyaspartic acid. The seeds also contain appreciable quantities of 2(S),3(S),4(R)-3-hydroxy-4-methylglutami c acid (G1) and 2(S),4(R)-4-methylglutamic acid.     

Changes in thioacidolysis products of lignin in wheat straw as affected by SO2 treatment and passage through the gastro-intestine of sheep

Sheep were fed two rations based on untreated (WS) and SO₂-treated (SO₂–WS) wheat straw. The neutral detergent fiber (NDF) preparations and water soluble lignins (WSL) isolated from straws, rumen liquor and feces were subjected to thioacidolysis, to study the effect of treatment and passage through the gastro-intestine on monolignol composition of the lignins. SO₂ treatment affected guaiacyl (G) and syringyl (S) contents of the straw cell walls with major effect on S, reducing G to 66% and S to 26% of their original concentrations, thus changing the S/G ratio in the CW fraction from 1.6 in WS to 0.64 in SO₂–WS. Concomitantly, as a reflection of the above-mentioned there was an increase in the S/G ratio of the WSL, from 0.54 in WS to 1.27 in SO₂–WS. Fecal CW residues were richer in p-hydroxyphenyl (H), G and S as compared with the original straw cell walls; the gap being particularly large in the SO₂–WS treatment in which the concentrations of monolignols in CW residues were increased by more than ten-fold. The concentration of WSL in the rumen of sheep fed the SO₂–WS ration was about eight-fold that found in the rumen of the WS sheep, most likely a result of the combined chemical (SO₂) and digestive (rumen microorganisms) effects. Most G and S were found in the CW fraction of the untreated straw, whereas in the SO₂-treated straw, the majority of G and S were in the water soluble lignin fraction. In the untreated wheat straw ration (WS), 25.7% of G and 36.6% of S disappeared from the digestive tract. Feed CW-G was higher by 18% and feed CW-S by 60% than the respective fecal CW components in the WS treatment, accompanied by only modest quantitative changes between feed and feces, in the G and S components of WSL. In the SO₂–WS treatment, CW-G was increased from 3.48 to 6.26 g/day (by 80%) and CW-S from 2.58 to 6.56 g/day (by 154%) between feed and feces. The digestibility of total acetyl bromide lignin (ABL) was in accord with that of the monolignol data namely, a small proportion (11.4%) of total ABL disappeared from the gastro-intestine of the WS sheep, but a minor, almost negligible percentage (2.94%) of the ABL was digested by the SO₂–WS sheep.     

Inhibition of Escherichia coli glutamine synthetase by phosphinothricin

The inhibition of Escherichia coli glutamine synthetase by phosphinothricin [2-amino-4-(methylphosphinyl)butanoic acid] has been studied. This amino acid was observed to function as an active site directed inhibitor exhibiting time-dependent inhibition of glutamine synthetase in the presence of ATP or adenylylimidodiphosphate (AMPPNP) but not adenylyl(β,γ-methylene) diphosphonate (AMPPCP). The inactivation was observed to be pseudo-first order. Phosphinothricin was also found to inhibit the enzyme reversibly under initial rate conditions and was competitive with respect to glutamate with K_1S = 18 ± 3 μm. The inactive enzyme inhibitor complex was found to contain approximately 11 molecules of ADP and of ³²P per dodecamer using [γ-³²P]ATP. Reactivation of the inactive enzyme complex was achieved by incubating the enzyme complex in 50 mm acetate (pH 4.4), 1 m KCl, and 0.40 m (NH₄)₂SO₄. ADP, phosphinothricin, and P_i were released upon reactivation.     

Optimization of bioleaching and oxidation of gold-bearing pyrite-arsnopyrite ore concentrate in batch mode

Biooxidation of refractory gold-bearing pyrite-arsenopyrite flotation concentrate was optimized and the abundance of predominant groups in the community of thermophilic acidophilic chemolithotrophic microorganisms at various stages of bioleaching was determined. The optimal parameters for growth and leaching/oxidation of the mineral components of the concentrate were pH 1.4–1.8; 47.5°C; and the following salt concentrations in the liquid phase (g/L): K₂HPO₄ · 3H₂O ? 0.53, (NH₄)₂SO₄, 1.6 and MgSO₄ · 7H₂O, 2.5 (or (NH₄)₂SO₄, 1.23; ammophos, 0.41; KOH, 0.1) with 0.03% yeast extract. The optimal conditions resulted in high growth rate, high levels of iron and arsenic leaching, of Fe²⁺ and S^2?/S⁰ oxidation, and predominance of Acidithiobacillus caldus, Sulfobacillus spp., and Ferroplasma spp. in the community.     

Regio- and stereospecific synthesis of rac-carbasugar-based cyclohexane pentols; Investigations of their α- and β-glucosidase inhibitions

In the present study, (3aR,7aS)-1,3,3a,4,7,7a-hexahydroisobenzofuran was submitted to photooxygenation and two isomeric hydroperoxides were successfully obtained. Without any further purification, reduction of the hydroperoxides with titanium tetraisopropoxide catalyzed by dimethyl sulfide gave two alcohol isomers in high yields. After acetylation of alcohol with Ac₂O in pyridine, epoxidation reaction of formed monoacetates with m-CPBA, then chromatographed and followed by hydrolysis of the acetate groups with NH₃ in CH₃OH resulted in the formation of epoxy alcohol isomers respectively. These epoxy alcohol isomers were subjected to trans-dihydroxylation reaction with acid (H₂SO₄) in the presence of water to afford triols. Acetylation of the free hydroxyl groups produced benzofuran triacetates in high yields. Ring-opening reaction of furan triacetates with sulfamic acid catalyzed in the presence of acetic acid/acetic anhydrate and subsequently hydrolysis of the acetate groups with ammonia gave the targeted cyclohexane carbasugar-based pentols. All products were separated and purified by chromatographic and crystallographic methods. Structural analyses of all compounds were conducted by spectral techniques including NMR and X-ray analyses. The biological inhibition activity of the target compounds was tested against glycosidase enzymes, α- and β-glucosidase.     

Substrate specificity of human glutamine transaminase K as an aminotransferase and as a cysteine S-conjugate beta-lyase

Rat kidney glutamine transaminase K (GTK) exhibits broad specificity both as an aminotransferase and as a cysteine S-conjugate β-lyase. The β-lyase reaction products are pyruvate, ammonium and a sulfhydryl-containing fragment. We show here that recombinant human GTK (rhGTK) also exhibits broad specificity both as an aminotransferase and as a cysteine S-conjugate β-lyase. S-(1,1,2,2-Tetrafluoroethyl)-l-cysteine is an excellent aminotransferase and β-lyase substrate of rhGTK. Moderate aminotransferase and β-lyase activities occur with the chemopreventive agent Se-methyl-l-selenocysteine. l-3-(2-Naphthyl)alanine, l-3-(1-naphthyl)alanine, 5-S-l-cysteinyldopamine and 5-S-l-cysteinyl-l-DOPA are measurable aminotransferase substrates, indicating that the active site can accommodate large aromatic amino acids. The α-keto acids generated by transamination/l-amino acid oxidase activity of the two catechol cysteine S-conjugates are unstable. A slow rhGTK-catalyzed β-elimination reaction, as measured by pyruvate formation, was demonstrated with 5-S-l-cysteinyldopamine, but not with 5-S-l-cysteinyl-l-DOPA. The importance of transamination, oxidation and β-elimination reactions involving 5-S-l-cysteinyldopamine, 5-S-l-cysteinyl-l-DOPA and Se-methyl-l-selenocysteine in human tissues and their biological relevance are discussed.     

Zur biogenese des aza-oxa-spiran-systems der steroidalkaloide vom spirosolan-typ in Solanaceen

5α,6-³H₂-Solacongestidine and 5α,6-³ H₂-(22S)-dihydrosolacongestidine administered to Solanum dulcamara as well as 16-³H₂-(22S: 25R)-22,26-epimino- cholest-5-en-3β-ol (25-isodihydroverazine) and 7α-³H-(22S: 25R)-22,26-epimino-cholest-5-en-3β,16β-diol administered to Solanum laciniatum were converted to coladulcidine and solasodine, respectively. These results are discussed in relation to spirosolane alkaloid biosynthesis.     

Synthèse du 4-O-[(s)-1-carboxyéthyl]-d-glucose et de son isomère (R)

Alkylation of benzyl 2,3,6-tri-O-benzyl-β-D-glucopyranoside in N,Ndimethyl formamide with (R)-2-chloropropionic acid gave crystalline benzyl 2,3,6-tri-O-benzyl-4-O-[(S)-carboxyethyl]-β-D-glucopyranoside. After hydrogenolysis of the benzyl group 4-O-[(S)-D-carboxyethyl]-D-glucose was obtained which lactonized very easily. Treatment of benzyl 2,3,6-tri-O-benzyl-4-O-[(S)-1-carboxyethyl]-β-D-glucopyranoside with diazomethane gave cristalline benzyl 2,3,6-tri-O-benzyl-4-O-[(S)-1-(methoxycarbonyl)ethyl]-β-D-glucopyranoside, which was reduced with lithium aluminium hydride to crystalline benzyl 2,3,6-tri-O-benzyl-4-O-[(S)-1-(hydroxymethyl)ethyl]-β-D-glucopyranoside After hydrogenolysis of the benzyl groups 4-O-[(S)-1-(hydroxymethyl)ethyl]-D-glucose was obtained. A similar sequence of reactions was performed with (S)-2-chloropropionic acid.     

Structural studies on glycolipids. Part 1: 220 MHz pmr spectra of acetylated galactocerebrosides

The pmr spectra of fully acetylated 2S: 3R-2 amino-trans-4 octadecene-1, 3 diol (sphingosine) (lb), 2S : 3R-2 aminooctadecane-1, 3 diol (dihydrosphingosine) (2b), 1-O-β-D-galactopyranosyl-2S : 3R-2 tetracosanoylamido-trans-4 octadecene-1, 3 diol (cerasine) (3b), and 1-O-β-D-galactopyranosyl-2S : 3R-2 (2′ hydroxy) tetracosanoylamido-trans-4 octadecene-1, 3 diol (phrenosine) (4b), were determined in chloroform-d, acetone-d₆, and benzene-d₆ at 220 MHz. The relative chemical shifts of the various protons in the three solvents were different enough as to permit configurational and conformational information to be derived by partial first order analysis.     

A unique immuno-stimulant steroidal sapogenin acid from the roots of Asparagus racemosus

A new steroidal sapogenin molecule 1 having unique characteristics, 21-nor and unusual C19 carboxylic acid has been isolated from the roots of Asparagus racemosus. On the basis of chemical evidence, extensive spectroscopic analysis including two dimensional (2D) NMR and X-ray studies of single crystal, the structure of 1 was determined as (1S,2R,3S,8S,9S,10S,13S,14S,16S,17R,22R,25R)-21-nor-18β,27α-dimethyl-1β,2β,3β-trihydroxy-25-spirost-4-en-19β-oic acid. 1 crystallizes in monoclinic space group P2₁ with a = 9.295(2), b = 11.238(2), c = 11.376(2) Å; β = 91.993(4)°, Z = 2, D_cal = 1.344 Mg/m³. The structure was solved by direct methods and refined by full-matrix least-squares procedure to a final R-value of 0.0561 for 4064 observed reflections. 1 was tested against the type of immune responses generated during treatment in normal and immune-suppressed animals and detailed biological activity evaluation suggests it to be a potent immunostimulator.     

Influence of planting geometry on photosynthetically active radiation interception and dry matter production relationships in pearl millet

A field experiment was conducted at the International Crops Research Institute for the Semi-Arid Tropics (ICRISAT) Center, Patancheru, India to study photosynthetically active radiation (PAR) interception and dry matter production relationships in pearl millet (Pennisetum americanum (L.) Leeke). Two pearl millet genotypes, BJ 104 (G₁) and ICH 226 (G₂) were sown at three planting geometries obtained by using combinations of row and plant spacings (S₁: 37·5 cm × 26·6 cm; S₂: 75·0 cm × 13·3 cm; S₃: 150·0 cm × 6·6 cm) such that plant population was constant at 100 000 ha⁻¹ in all treatments. Cumulative intercepted PAR was maximum (330 MJ m⁻²) in G₂S₂ and minimum (268 MJ m⁻²) in G₁S₃. Conversion efficiency values ranged from 1·87 g MJ⁻¹ in G₁S₂ to 2·32 g MJ⁻¹ in G₂S₃. Final above-ground dry matter followed the pattern of cumulative intercepted PAR and maximum dry matter (7·22 Mg ha⁻¹) was produced by G₂S₂ while G₁S₃ produced minimum dry matter (4·97 Mg ha⁻¹).