The interaction between nonmetric and metric cranial variation.

Cranial discrete or 'epigenetic" traits have been analyzed for interrelationships with measurements of the skull in a sample of American Negro males. Univariate t and multivariate T2 tests are used. It has been the previous consensus view that nonmetric and metric characters are unrelated. Statistically significant associations between the total of 50 discrete and 23 metrical characters, however, are much more frequent than would be expected through random distribution. Multivariate analysis supplements simpler statistics by synthesizing patterns of variation within regions of the skull, identifying many interrelations of skull size and shape with discrete traits. A low but observable general influence is exerted upon nonmetric morphology by metrical variation of the human skull (or vice versa).     

Approximal grooving of teeth

Approximal grooving of teeth is a form of tooth wear seen in some fossil hominids (Neandertal Man and Pekin Man) and in some primitive peoples (Bushmen, Australian aborigines and American Indians). Previous workers have claimed the grooves were produced either by an acid secreted from the gum or by constant probings with a tooth-pick. The purpose of this paper is to refute these hypotheses, and to suggest from observations on the morphology of the grooves in four Bushman skulls, one American Indian skull, and one South African Negro skull that the approximal grooves are produced by dietary grit (sand and soil in the food and drinking water) being sucked from the vestibule into the oral cavity proper during the mouth-cleansing phase of swallowing.     

Morphology of Liberian Negro deciduous teeth. II. Arch dimensions and occlusion

Liberian Negro deciduous dentitions have arch dimensions which significantly exceed those of a variety of White populations. Winged incisors were present in 14.3% of the Negro population, again exceeding White values. No differences were noted in incisal overbite or overjet. Diastemal spaces were greater in the Negro dentitions than in the White, but the significance of this is as yet unknown. An exceptional finding was the absolute lack of Class II (distocclusion) in the Negro series. A discussion of functional occlusion stressed the necessity for the inclusion of such dynamic factors as dental abrasion, mesial migration and physiological rest position in future studies of comparative dental anthropology.     

The secular trend in the diameter of the femur of American Whites and Negroes

The transverse diameter of the adult femur at the level of its mid-bicondylar length is related to length, age and year of birth in American White and Negro skeletons of both sexes of the Terry Collection. The coefficients of correlation between age at death and birth year are significant in all four sex-race groups, as are also the regression coefficients of transverse diameter on length and on age. The regression of length on age is negative and on birth year positive, although statistically significant only in the Negro male group. The partial regression coefficients of transverse diameter on length, on age, and on birth year, each eliminating the effects of the other two variables, are significant for length, not significant for age except in the Negro male group, and significant for birth year except in the Negro male group. Thus, the statistics of three of the sex-race groups do not support the hypothesis that transverse diameter of the femur increases with age, but rather suggest a negative secular trend; the apparent inconsistency in these findings of the Negro male group can, however, be considered insignificant from a statistical point of view.     

Phylogeography of a flooded forest specialist fish from central Amazonia based on intron DNA: the cardinal tetra Paracheirodon axelrodi

1. Historic and extant landscape structures and environmental conditions are known to influence phylogeographic patterns and population histories in organisms from Amazonia. Recent work suggests that events of the Tertiary Period have played a significant role in generating biodiversity in this exceptionally rich but understudied region. However, species distributions and population structures are also affected by recent environmental and physical changes, especially within highly dynamic ecosystems. 2. The cardinal tetra is a small luminous fish native to the dynamic flooded forest ecosystems of the Rio Negro and Orinoco basins of South America. This very popular aquarium fish represents the single most important species in the ornamental fishery of the Rio Negro, an activity of high socio‐economic value for local riverine communities. Here we use a fine‐scale sampling regime and sequence data from the second intron of the Ribosomal protein S7 (S7 2) to investigate population structure, colonisation history and genealogical relationships in cardinal tetras of the Rio Negro. 3. High levels of S7 2 polymorphisms revealed phylogeographic patterns across several temporal settings that appear associated with the complex dynamics of the region. Our results suggest a long history of isolation and persistence of cardinal tetra populations in the headwaters and upper regions of the Rio Negro and recent events of colonisation within the incipient Rio Negro floodplain. These colonisation events were followed by recent population expansions likely facilitated by the establishment of the extensive Rio Negro floodplain, an anabranching ecosystem of Holocene age. 4. Our reconstruction of the phylogeographic history of cardinal tetras based on S7 2 intron sequence data reflects the complex influence of both geomorphological and climatic events through time in the Rio Negro basin. Our findings also indicate that in order to maintain the cardinal tetra fishery as a sustainable activity for rural Amazonians, the fishery should be restricted to the middle Rio Negro, the region of the basin where population replenishment is more likely to occur.     

Cryptic diversity in the mtDNA of the ornamental fish Carnegiella strigata

Mitochondrial DNA ( mtDNA) sequences of the marbled hatchetfish Carnegiella strigata, an ornamental fish exported from the Negro River, was examined to determine its genetic diversity and population structure in blackwater rivers (Negro and Uatumã Rivers) in the central Amazon. Analyses of a 646 bp fragment of the ATPase 6/8 mtDNA gene revealed two monophyletic lineages of C. strigata with considerable genetic distance between them (10–12%), suggesting that these lineages should not be considered a single stock. Furthermore, there were strong differences in the geographical distribution of the lineages. These results indicate a past association between drainages of the Negro and Uatumã Rivers. They also suggest that, in the Negro River, its main tributary, the Branco River, may act as a geographical barrier and potentially an ecological barrier between populations of the middle and lower portions of the river.     

Comparative odontometry of the permanent post-canine dentition of American Whites and Negroes

The permanent post-canine teeth of American Whites and American Negroes of the New York City area were studied odontometrically. The mesio-distal and bucco-lingual dimensions of the crowns were measured, as was the total tooth height and crown height. The individual root lengths of these teeth were also measured, in several ways, as was root width. The mean total root volumes of these teeth was measured by a unique mercury displacement method. In another aspect of this study the mean angular divergence of the roots from a mid-coronal vertical plane was determined, while the robustness of these roots was described as a ratio between root width and length. Finally, an extensive comparison was made between our data and those in the literature on a number of African Negro populations. American Negro tooth crown and root dimensions and volumes were significantly different from those of American Whites only sporadically, although the Negro teeth usually tended to be larger. Our comparative data gave some indication that the size of both the maxillary and mandibular American negro teeth, as well as the shape of the mandibular (but not the maxillary) American Negro teeth are roughly intermediate between those of American Whites and South African Negroes. This suggestion that a “hybrid” population may possess intermediate values of crown index and of crown module is supported by our analysis of Hottentot-South African Negro hybrids with their presumptive parental stocks.     

Ethnic admixture composition of two western Amazonian populations

A small riverine community, Portuchuelo (8 degrees 37'S, 63 degrees 49'W), and a rural county, Monte Negro (10 degrees 15'S, 63 degrees 18'W), both in the state of Rond?nia, Brazil, were studied for the purposes of ascertaining health conditions and the causes of the variability of some infectious diseases. The sample included 181 inhabitants of Portuchuelo and 924 of Monte Negro. Data on 11 blood polymorphisms (ABO, Rh, MNSs, Kell, Fy, haptoglobin, hemoglobin, ACP1, PGM1, GLO1, and CA2) were used to determine the ethnic composition of the inhabitants of Portuchuelo and Monte Negro. The contributions of Africans, Amerindians, and Europeans to the ethnic composition of the studied populations were, respectively, 0.21 +/- 0.046, 0.44 +/- 0.064, and 0.35 +/- 0.069 in Portuchuelo; and 0.25 +/- 0.032,0.12 +/- 0.046, and 0.63 +/- 0.054 in Monte Negro.     

Morphology of Liberian Negro deciduous teeth I. Odontometry

An odontometric study of the deciduous teeth of 21 Liberian Negro children is reported. These data were obtained from dental casts alone. Statistical comparisons were made of the mesiodistal diameter alone with two American White populations and the three Japanese populations. Maxillary teeth, with the exception of the cuspids were larger in the Negro sample, while only the Negro mandibular molars were significantly wider. This situation resulted in an alteration of Negro maxillary tooth size order. Comparisons were made with other populations reported in the literature which led us to stress the fact that, as yet, no satisfactory sample of deciduous tooth measurements are available for any population. A discussion of tooth form differences stresses the point that teeth differ in both attributes of form, i.e., in shape as well as in size between the several major racial groups. The processes by which these shape differences are brought about were discussed and it was suggested that differing relative growth rates may well be one cause. An allometric analysis of fetal molar tooth growth showed, again, that a sharp interphase occurs in all teeth, with a subsequent decrease in specific growth rate. This interphase corresponds to the initiation of cuspal calcification.     

The Culture of Poverty: An Adjustive Dimension

The "Moynihan controversy" concerning the existence of a subculture of poverty among the Negro poor has been marked by polar positions. There are those who feel that much of the "deviant behavior" of this group is actually normative and transmitted in the socialization process. Others maintain that such behavior is not normative and represents merely situational responses to extreme poverty and other forms of deprivation. The data in this paper, derived from interviews with a sample of the Negro population of Philadelphia, indicate that Negroes living in poverty hold attitudes that can be characterized as a "subculture of poverty." On the other hand, the data also suggest that such attitudes represent but one segment of the total range of attitudes and reference values held by this population, many of which are shared by the larger society. Furthermore, the evidence indicates that these attitudes serve to maintain the mental health of those living in a severely disadvantaged social situation. [deviant behavior, Negro, poverty]     

Wide but not impermeable: Testing the riverine barrier hypothesis for an Amazonian plant species

Wallace's riverine barrier hypothesis postulates that large rivers, such as the Amazon and its tributaries, reduce or prevent gene flow between populations on opposite banks, leading to allopatry and areas of species endemism occupying interfluvial regions. Several studies have shown that two major tributaries, Rio Branco and Rio Negro, are important barriers to gene flow for birds, amphibians and primates. No botanical studies have considered the potential role of the Rio Branco as a barrier, while a single botanical study has evaluated the Rio Negro as a barrier. We studied an Amazon shrub, Amphirrhox longifolia (A. St.‐Hil.) Spreng (Violaceae), as a model to test the riverine barrier hypothesis. Twenty‐six populations of A. longifolia were sampled on both banks of the Rio Branco and Rio Negro in the core Amazon Basin. Double‐digest RADseq was used to identify 8,010 unlinked SNP markers from the nuclear genome of 156 individuals. Data relating to population structure support the hypothesis that the Rio Negro acted as a significant genetic barrier for A. longifolia. On the other hand, no genetic differentiation was detected among populations spanning the narrower Rio Branco, which is a tributary of the Rio Negro. This study shows that the strength of riverine barriers for Amazon plants is dependent on the width of the river separating populations and species‐specific dispersal traits. Future studies of plants with contrasting life history traits will further improve our understanding of the landscape genetics and allopatric speciation history of Amazon plant diversity.     

Seroepidemiological study of human hydatidosis, by means of an indirect hemagglutination test in Rio Negro County, X Region, Chile, 1989-1990

Rio Negro Country (40 degrees 48'-40 degrees 50' South lat.; 73 degrees 12'-73 degrees 13' West long.), is located in the province of Osorno, South of Chile. It has a population of 18,031 inhabitants, with 39% in rural areas. The basic economic activity is cattle raising (cows, pigs). According to reports, prevalence of human hydatidosis in 1988 was 11.1 per 100,000. In order to contribute to a better knowledge of human hydatidosis in Rio Negro County, an indirect hemagglutination test (IHAT) was performed to 509 randomized persons. Five (1.0%) individuals resulted positive.     

Comparison of the effects of different virus infections on performance of three Majorcan grapevine cultivars in field conditions

The effects of viruses on grape production and must quality are not fully understood. In this study, the evaluation of the impact of different virus infections on performance of the main autochthonous grapevine varieties of Mallorca (Callet, Manto Negro and Moll) was pursued. Therefore, a large number of vines were observed in field conditions over 4 years and tested by enzyme-linked immunosorbent assay for viruses listed by the international certification programmes. In each variety, some specific virus infections resulted to be more effective than the others in inducing losses in production. In Callet, yield (Y) reduction was over 20% in plants infected by Grapevine fanleaf virus (GFLV). In Moll, plants subject to more than one infection showed over 40% Y decrease. In Manto Negro, the most surprising results were obtained, because plants showed almost 40% Y reduction because of Grapevine leafroll-associated virus-1 (GLRaV-1) infection. In addition, virus infections were linked to some must quality parameter increase in Manto Negro and Moll, but in the majority of cases it was an indirect effect, because the decrease in production parameters played a predominant role by producing an important concentration effect. However, in Manto Negro, anthocyanin content decrease was directly related to GFLV infection.     

Height and weight growth patterns of school age deaf children

Distance and velocity curves for height and weight were analyzed in a mixed longitudinal sample of American White, American Negro and Mexican-American deaf children 6 through 17 years of age. The heights of deaf boys and girls are, on the average, consistently below an accepted pediatric standard from six through ten years of age. Between 11 and 17 years, deaf White and Negro boys approximate the standard, while White and Negro girls are at or slightly below the standard. Deaf Mexican-American children are consistently below the height standard. For body weight, deaf boys are at or slightly below the standard from 6 to 11 years, and are at or slightly above the weight standard from 12 to 17 years of age. White and Negro deaf girls generally approximate the weight standard from eight years of age on. Mexican-American deaf girls are consistently below the standard until 13 years of age, while between 14 and 17 years they are at or above the standard. Height and weight velocity curves for deaf children parallel closely the incremental standards of Falkner ('62). The height velocity curve, however, appears to peak, on the average, about one year earlier in deaf children.     

The African custom of tooth mutilation in America

A broad historical sketch of tooth mutilation stresses the role of Negro slaves in introducing the African custom into America, and the possibility of filling in gaps in our knowledge along this line from recovered skeletal remains. As an example of what can be learned, a skeleton found recently in Grenada, West Indies, is described as that of a male Negro, with a West African type of dental mutilation. The individual represented is shown to have been around 35–40 years of age, below average in size, with bandy legs, signs of mild deficency disease, and a variety of dental and periodontal diseases. Geographical and historical factors are reviewed in an effort to decide whether or not he was one of the original slaves or a descendant of a slave. The authors conclude that the circumstances of the find warrant the belief that he had been born in Africa and received his mutilation there. An earlier report of another such find in Barbados, and the mention of a subsequent find in St. Croix, suggest that a more intensive search for Negro remains in the West Indies would prove fruitful.     

Allelism Tests between the Rust Resistance Gene Present in Common Bean Cultivar Ouro Negro and Genes Ur-5 and Ur-11

The pathogenic variability of the fungus Uromyces appendiculatus is an obstacle for the creation of rust‐resistant common bean (Phaseolus vulgaris L.) varieties. Gene pyramiding is an alternative strategy for the development of varieties with durable resistance. However, to reach this goal it is important to identify different genes with ample resistance spectra. Cultivars Ouro Negro, Mexico 309 and Belmidak RR‐3 have been shown to be resistant to several rust races identified in the state of Minas Gerais, Brazil. Ouro Negro is the only rust resistance source being used in the BIOAGRO/Universidade Federal de Viçosa (UFV) breeding programme, which aims at pyramiding resistance genes in the ‘carioca‐type’ cultivar Rudá. It would be also interesting to use Mexico 309 (Ur‐5) and Belmidak RR‐3 (Ur‐11) in the breeding programme. However, there is no available information on the possible allelic relationships between the Ouro Negro resistance gene and Ur‐5 and Ur‐11. This work aimed at: (1) determining the allelic relationship between the Ouro Negro resistance gene and Ur‐5 and Ur‐11; and (2) evaluating a random amplified polymorphic DNA (RAPD) marker previously reported as being linked to Ur‐11, in populations from crosses between Belmidak RR‐3 and Rudá. The allelism tests confirmed that the Ouro Negro rust resistance gene is distinct from Ur‐5 and Ur‐11 and the molecular analyses confirmed that the RAPD marker can be used in our breeding programme to develop ‘carioca‐type’ cultivars with the Ur‐11 gene.     

Acid-shifted isoelectric point profiles of the proteins in a hypersaline microbial mat: an adaptation to life at high salt concentrations?

In a metagenomic analysis of a stratified hypersaline (9?% salt) microbial mat in Guerrero Negro, Mexico, Kunin et al. (Mol Systems Biol 4:198, 2008) detected a significantly acid-shifted proteome, and concluded that adaptation by enriching proteins with acidic amino acids is more widespread than previously assumed. We here reevaluate these data and conclusions by comparing the isoelectric point profiles of the Guerrero Negro microbial mats (average isoelectric point 6.8) with those of the proteins encoded by the genomes of prokaryotes adapted to different salt concentrations ranges and belonging to different phylogenetic and physiological groups. Average isoelectric points below 6.8 were found not only in the proteomes of the moderately halophilic aerobic bacteria Halomonas elongata and Chromohalobacter salexigens, but even in common types of marine bacteria of the genera Alteromonas and Aliivibrio. We did not find clear evidence that the isoelectric point profile of the Guerrero Negro microbial mat can be considered to be the result of species-independent molecular convergence of the members of the microbial community determined by the salinity of the overlaying brine.     

Development and characterization of microsatellite markers for the Amazonian blackwing hatchetfish,Carnegiella marthae (Teleostei,Gasteropelecidae)

The blackwing hatchetfish, Carnegiella marthae, is a small characin species distributed in forest streams of the Negro and upper Orinoco River basins in Amazonia. Freshwater hatchetfish are popular in the aquarium trade and represent an economic resource for the riverine people from middle Rio Negro, in Brazil. We isolated and characterized seven microsatellite DNA loci for the blackwing hatchetfish. Number of alleles and heterozygosity per locus in a sample of 30 fish ranged from three to 17 and from 0.19 to 0.87, respectively. These microsatellite loci provide powerful markers for studies on taxonomy, management and phylogeographic history of Amazonian hatchetfish.     

Characterization of microsatellite loci for the Amazonian rummy‐nose tetra,Hemigrammus bleheri (Teleostei,Characidae)

The rummy‐nose tetra, Hemigrammus bleheri, is a small fish found in forest streams of the Rio Negro floodplain, central Amazonia. This species is popular in aquaria and used as an ornamental fishery resource by the riverine people from middle Rio Negro. Here we describe eight microsatellite DNA loci for rummy‐nose tetras. Number of alleles and heterozygosity per locus in a sample of 30 fish ranged from five to 22 and from 0.52 to 0.96, respectively. These highly variable genetic markers provide important tools for investigating population history and identifying conservation units in rummy‐nose tetras.     

Comparison of bacterial communities in the Solimões and Negro River tributaries of the Amazon River based on small subunit rRNA gene sequences

The microbiota of the Amazon River basin has been little studied. We compared the structure of bacterial communities of the Solim?es and Negro Rivers, the main Amazon River tributaries, based on analysis of 16S rRNA gene sequences. Water was sampled with a 3-L Van Dorn collection bottle; samples were collected at nine different points/depths totaling 27 L of water from each river. Total DNA was extracted from biomass retained by a 0.22-μm filter after sequential filtration of the water through 0.8- and 0.22-μm filters. The 16S rRNA gene was amplified by PCR, cloned and sequenced, and the sequences were analyzed with the PHYLIP and DOTUR programs to obtain the operational taxonomic units (OTUs) and to calculate the diversity and richness indices using the SPADE program. Taxonomic affiliation was determined using the naive Bayesian rRNA Classifier of the RDP II (Ribosomal Database Project). We recovered 158 sequences from the Solim?es River grouped into 103 OTUs, and 197 sequences from the Negro River library grouped into 90 OTUs by the DOTUR program. The Solim?es River was found to have a greater diversity of bacterial genera, and greater estimated richness of 446 OTUs, compared with 242 OTUs from the Negro River, as calculated by ACE estimator. The Negro River has less bacterial diversity, but more 16S rRNA gene sequences belonging to the bacterial genus Polynucleobacter were detected; 56 sequences from this genus were found (about 30% of the total sequences). We suggest that a more in-depth investigation be made to elucidate the role played by these bacteria in the river environment. These differences in bacterial diversity between Solim?es and Negro Rivers could be explained by differences in organic matter content and pH of the rivers.