An analysis of developmental timing in Dictyostelium discoideum

A new method has been developed to assess the minimum complexity and relationships of those pathways (developmental timers) which time the consecutive stages of a developing system (Soll, 1983). This method has been applied to the morphogenetic program of Dictyostelium discoideum and has resulted in (1) a minimum estimate of the number of components comprising the timers for the first seven stages of morphogenesis, (2) a characterization of the temperature sensitivities of these components including demonstration of a reversible timer component, (3) detailed temporal definition of a number of transition points between rate-limiting components including a major branch point for the onset of several independent timer components coincident with the onset of aggregation, and (4) a temporal model for the relationships between the timers of the seven consecutive morphogenetic stages, including several examples of parallel timers.     

Differentiation and dedifferentiation can function simultaneously and independently in the same cells in Dictyostelium discoideum

When developing cultures of Dictyostelium discoideum are disaggregated and morphogenesis is reinitiated, cells recapitulate the stages they had progressed through prior to disaggregation in a fraction of the original time. If developing cultures are disaggregated and the cells resuspended in nutrient medium, they retain this capacity for 1.5 hr and then synchronously and rapidly revert to the slow timing of log phase cells. Loss of the capacity to recapitulate morphogenesis rapidly is referred to as the “erasure event.” Following the erasure event, cells systematically lose developmentally acquired functions in a defined temporal sequence of dedifferentiation. Cells which have just passed through the erasure event can be stimulated to reenter the developmental program, even though they still possess several aggregation-associated functions acquired during the initial developmental program. In this report, we have tested whether cells stimulated to reenter the developmental program immediately after the erasure event progress along the same rate-limiting pathway leading to aggregation as they did during initial development and whether this rate-limiting pathway can run simultaneously with and independently of the sequence of dedifferentiation. Results are presented which demonstrate (1) that the erasure event resets the rate-limiting pathway for development back to zero and that erased cells reentering development progress along the same rate-limiting pathway as naive log phase cells, (2) that the loss of an aggregation-associated function late in the sequence of dedifferentiation is completely blocked by the addition of cycloheximide, but not cAMP, just prior to the expected time of loss, and (3) that differentiation and dedifferentiation can function simultaneously and independently in the same cells, even though the former leads to the acquisition and the latter to the loss of the same aggregation-associated functions (in this case EDTA-resistant adhesion and cAMP-stimulated motility).     

Coh A,a mutation affecting the post aggregative related (par) cohesive system of Dictyostelium discoideum

Three stage-specific cohesive systems operate in D. discoideum: VEG, elaborated by vegetative cells: AR, by aggregation competent cells; and PAR, by post aggregation stage cells. Previous study of a mutant strain JC-5 had shown the stability of its PAR system (but not the AR) to be temperature sensitive. However, the phenotypic expression of this mutation termed Coh A is complicated by the presence in that strain of a preexisting mutant gene Rde A, which accelerates developmental events generally and alters the pattern of morphogenesis. Genetic evidence presented here indicates that the two mutations have been separated by parasexual recombination yielding a Coh A, Rde A⁺ segregant class of which strain JC-36 is a prototype. At the permissive temperature, JC-36 follows a morphogenetic sequence like that of the wild type in respect to timing, morphogenetic pattern, and spore appearance. At the restrictive temperature, it forms normal aggregates at the usual time but exhibits two morphogenetic aberrancies during post aggregative development. First, fruit construction is arrested at a stage approximating the 16 hr “Bottle” stage of the wild type, though more squat and blunt tipped, and then the aggregate regresses. Cytodifferentiation into spores and stalk cells is also blocked. Second, a shift of slugs migrating normally at the permissive temperature to the restrictive causes the latter to disintegrate progressively as they leave clumps of cells behind them within the flattened sheath. JC-36 cells developing at the restrictive temperature also exhibited a decrease in EDTA resistant cohesivity attributable on two grounds to the sensitivity of the PAR system. In addition, the disappearance of the AR system completed in the wild type by the Mexicanhat (18–19 hr) stage is indefinitely arrested at an intermediate level in JC-36.     

Studies on the morphogenetic response of maize tissue cultures of different origin

The participation of the genotype and of organ specifity effect in the quality of morphogenetic response (callogenesis, bud and root formation) of primary maize explants has been investigated. The presence of synthetic auxins — especially 2,4-D at 1 to 5 mg 1^?1 conc. - in cultivation medium was essential for both callus formation and continuous growth of tissue and suspension cultures. Anatomic structure of callus cultures is permanently heterogeneous, their growth is ensured by the action of meristems of the type found in root tips, and by repeated callogenesis from malformed roots. Adventive buds and plants could be regenerated only from cultures of embryonal origin (of one line). The presence or absence of the endosperm gene “opaque” did not influence callogenesis intensity in cultures of isolated embryos; however the morphogenetic response was clearly “line specific”.     

Mitochondria-targeted antioxidant provides for enhanced morphogenetic potential in plant tissue cultures

An ability to regenerate plants from tissue cultures is important for biotechnology; however, many species and cultivars a have low morphogenetic potential. Since oxidative stress is one of the factors affecting morphogenesis, we assessed an ability of a membrane-penetrating mitochondria-targeted antioxidant SkQ1 to improve plant regeneration from cultured tissues of Zea mays L., Triticum aestivum L., Saccharum officinarum L., Medicago falcate L., and M. glutinosa M.Bieb. SkQ1 at nanomolar concentrations was found to stimulate both the set of morphogenenic structures and their subsequent development with the formation of plantlets of all plant species tested. SkQ1 constituents, dodecylplastoquinone and dodecyltriphenylphosphonium, could also exert stimulatory effects on plant regeneration from morphogenic callus, although these effects were less prominent than that of SkQ1. SkQ1-mediated stimulation was most pronounced (up to sevenfold) for cultured tissues with a low morphogenetic potential. The observed properties of SkQ1 suggest its possible application in promoting morphogenesis in a wide range of genotypes.     

Cell surface proteins of Drosophila: I. Changes induced by 20-hydroxyecdysone

Treatment of several Drosophila cell lines with the molting hormone (20-hydroxyecdysone) resulted in biochemical and cellular changes including the morphogenetic process of cell aggregation. Radiolabeling of the cell surface proteins revealed 34 polypeptides that are modulated by the hormone's action. This modulation included both expression of “new” proteins and disappearance of preexisting polypeptides. Whereas most of the hormone-induced proteins were lentil lectin-binding glycoproteins, only one group of disappearing proteins appears to bind lentil lectin. Labeling of the cell surface prior to hormone addition revealed no specific modification of preexisting surface proteins which could account for the protein changes observed with one possible exception. The potential relationship between the modulation in surface proteins and the increase in cell-cell adhesion that occurs during hormone exposure is discussed.     

Extraembryonic development in insects and the acrobatics of blastokinesis

Extraembryonic development is familiar to mouse researchers, but the term is largely unknown among insect developmental geneticists. This is not surprising, as the model system Drosophila melanogaster has an extremely reduced extraembryonic component, the amnioserosa. In contrast, most insects retain the ancestral complement of two distinct extraembryonic membranes, amnion and serosa. These membranes are involved in several key morphogenetic events at specific developmental stages. The events of anatrepsis and katatrepsis-collectively referred to as blastokinesis-are specific to hemimetabolous insects. Corresponding events in holometabolous insects are simplified and lack formal names. All insects retain dorsal closure, which has been well studied in Drosophila. This review aims to resurrect both the terminology and awareness of insect extraembryonic development-which were last common currency in the late nineteenth and early twentieth centuries-as a number of recent studies have identified essential components of these events, through RNA interference of developmental genes and ectopic hormonal treatments. As much remains unknown, this topic offers opportunities for research on tissue specification, the regulation of cell shape changes and tissue interactions during morphogenesis, tracing the origins and final fates of cell and tissue lineages, and ascertaining the membranes' functions between morphogenetic events.     

Effects of differentiated membranes on the developmental program of the cellular slime mold.

In the preceding paper isolated aggregation phase membranes (prepared from Dictyostelium discoideum cells which had proceeded through 12–14 hr of the developmental cycle) were found to be capable of preventing the aggregation and subsequent morphological development of vegetative cells when mixed with these and plated under normal conditions for slime mold development. In this paper we have extended the investigations on the nature of this interaction by monitoring the display of several developmentally controlled enzymes. It appears that exogenously applied aggregation phase membrane preparations are capable of influencing biochemical events inside D. discoideum cells through their interaction with the cell surface. This interaction leads to the induction or accumulation of some developmentally controlled enzymes, as well as the repression or excretion of others. The results suggest that the formation and maintenance of correct cell-cell contacts during normal development may be of crucial importance. They also show that changes in the specific activity of some developmentally controlled enzymes may in certain conditions be wholly divorced from both morphogenesis and the normal sequence of induction.     

New aspect of the “mycetome” of a thrips,Bactrothrips brevitubus Takahashi (Insecta: Thysanoptera)

Morphology and cytochemical properties of “mycetomes” are described in the developing oocytes and eggs of an idolothripine thrips, Bactrothrips brevitubus (Thysanoptera). The “mycetome” is an aggregation of numerous granules of various sizes. We found no membrane encapsulating the aggregation of granules. Two types of granules are distinguishable: the smaller ones filled with electron-dense material and the larger ones with inclusion of myelin-like structures. Each of the granules has a limiting membrane. The limiting membrane is a simple unit membrane but shows no characteristics of cell walls. No nucleoid or nucleoplasm is detected in the granules. The “mycetome” takes up dyes whose specific incorporation into lysosomes has been demonstrated. In addition, a high activity of acid phosphatase is demonstrated in the “mycetome.” These characteristics apparently indicated that the “mycetome” of Bactrothrips brevitubus is an aggregation of lysosomes but not a clump of microorganisms. Thus we propose that the structure being regarded as the mycetome should be renamed the “lysosomal aggregation.” © 1994 Wiley-Liss, Inc.     

Morphogenetic characters of the model ciliate Euplotes vannus (Ciliophora,Spirotrichea): Notes on cortical pattern formation during conjugational and postconjugational reorganization

Ciliated protists represent a morphologically and genetically distinct group of single-celled eukaryotes which can reproduce asexually and sexually. Morphogenesis occurs in both asexual and sexual modes of reproduction which is of interest for researchers investigating cell differentiation, regeneration, systematics and evolution. However, studies of morphogenesis have concentrated almost entirely on the asexual mode. Here we use protargol staining to investigate the morphogenetic processes during sexual reproduction in the model species Euplotes vannus (Müller). The major events include: (1) two rounds of morphogenesis occur during sexual reproduction, i.e., conjugational and postconjugational reorganization; (2) in both processes the oral primordium is generated de novo in a pouch beneath the cortex; (3) the frontoventral-transverse cirri anlagen are formed de novo and fragment in a 3:3:3:3:2 pattern; (4) the leftmost cirrus and the paroral membrane do not change during conjugational morphogenesis, but reorganize de novo during postconjugational morphogenesis; (5) marginal cirral anlagen are formed de novo in both morphogenetic processes; (6) two or three caudal cirri are formed at the ends of the rightmost two or three old dorsal kineties; (7) the dorsal kineties are retained entirely. These results can serve as reference to investigate the morphogenetic events in the different stages of sexual reproduction.     

A System for ex vivo Culturing of Embryonic Pancreas

The pancreas controls vital functions of our body, including the production of digestive enzymes and regulation of blood sugar levels¹. Although in the past decade many studies have contributed to a solid foundation for understanding pancreatic organogenesis, important gaps persist in our knowledge of early pancreas formation². A complete understanding of these early events will provide insight into the development of this organ, but also into incurable diseases that target the pancreas, such as diabetes or pancreatic cancer. Finally, this information will generate a blueprint for developing cell-replacement therapies in the context of diabetes.During embryogenesis, the pancreas originates from distinct embryonic outgrowths of the dorsal and ventral foregut endoderm at embryonic day (E) 9.5 in the mouse embryo^3,4. Both outgrowths evaginate into the surrounding mesenchyme as solid epithelial buds, which undergo proliferation, branching and differentiation to generate a fully mature organ^2,5,6. Recent evidences have suggested that growth and differentiation of pancreatic cell lineages, including the insulin-producing β-cells, depends on proper tissue-architecture, epithelial remodeling and cell positioning within the branching pancreatic epithelium^7,8. However, how branching morphogenesis occurs and is coordinated with proliferation and differentiation in the pancreas is largely unknown. This is in part due to the fact that current knowledge about these developmental processes has relied almost exclusively on analysis of fixed specimens, while morphogenetic events are highly dynamic.Here, we report a method for dissecting and culturing mouse embryonic pancreatic buds ex vivo on glass bottom dishes, which allow direct visualization of the developing pancreas (Figure 1). This culture system is ideally devised for confocal laser scanning microscopy and, in particular, live-cell imaging. Pancreatic explants can be prepared not only from wild-type mouse embryos, but also from genetically engineered mouse strains (e.g. transgenic or knockout), allowing real-time studies of mutant phenotypes. Moreover, this ex vivo culture system is valuable to study the effects of chemical compounds on pancreatic development, enabling to obtain quantitative data about proliferation and growth, elongation, branching, tubulogenesis and differentiation. In conclusion, the development of an ex vivo pancreatic explant culture method combined with high-resolution imaging provides a strong platform for observing morphogenetic and differentiation events as they occur within the developing mouse embryo.     

PlexinA1 interacts with PTK7 and is required for neural crest migration

Members of the plexin protein family are known regulators of axon guidance, but recent data indicate that they have broader functions in the regulation of embryonic morphogenesis. Here we provide further evidence of this by showing that PlexinA1 is expressed in Xenopus neural crest cells and is required for their migration. PlexinA1 expression is detected in migrating cranial neural crest cells and knockdown of PlexinA1 expression using Morpholino oligonucleotides inhibits neural crest migration. PlexinA1 likely affects neural crest migration by interaction with PTK7, a regulator of planar cell polarity that is required for neural crest migration. PlexinA1 and PTK7 interact in immunoprecipitation assays and show phenotypic interaction in co-injection experiments. Considering that plexins and PTK7 have been shown to genetically interact in Drosophila axon guidance and chick cardiac morphogenesis, our data suggest that this interaction is evolutionary conserved and may be relevant for a broad range of morphogenetic events including the migration of neural crest cells in Xenopus laevis.     

A tunable fluorescent timer method for imaging spatial‐temporal protein dynamics using light‐driven photoconvertible protein

Cellular function is largely determined by protein behaviors occurring in both space and time. While regular fluorescent proteins can only report spatial locations of the target inside cells, fluorescent timers have emerged as an invaluable tool for revealing coupled spatial‐temporal protein dynamics. Existing fluorescent timers are all based on chemical maturation. Herein we propose a light‐driven timer concept that could report relative protein ages at specific sub‐cellular locations, by weakly but chronically illuminating photoconvertible fluorescent proteins inside cells. This new method exploits light, instead of oxygen, as the driving force. Therefore its timing speed is optically tunable by adjusting the photoconverting laser intensity. We characterized this light‐driven timer method both in vitro and in vivo and applied it to image spatiotemporal distributions of several proteins with different lifetimes. This novel timer method thus offers a flexible “ruler” for studying temporal hierarchy of spatially ordered processes with exquisite spatial‐temporal resolution. (© 2015 WILEY‐VCH Verlag GmbH &Co. KGaA, Weinheim)     

Biomechanics and the Thermotolerance of Development

Successful completion of development requires coordination of patterning events with morphogenetic movements. Environmental variability challenges this coordination. For example, developing organisms encounter varying environmental temperatures that can strongly influence developmental rates. We hypothesized that the mechanics of morphogenesis would have to be finely adjusted to allow for normal morphogenesis across a wide range of developmental rates. We formulated our hypothesis as a simple model incorporating time-dependent application of force to a viscoelastic tissue. This model suggested that the capacity to maintain normal morphogenesis across a range of temperatures would depend on how both tissue viscoelasticity and the forces that drive deformation vary with temperature. To test this model we investigated how the mechanical behavior of embryonic tissue (Xenopus laevis) changed with temperature; we used a combination of micropipette aspiration to measure viscoelasticity, electrically induced contractions to measure cellular force generation, and confocal microscopy to measure endogenous contractility. Contrary to expectations, the viscoelasticity of the tissues and peak contractile tension proved invariant with temperature even as rates of force generation and gastrulation movements varied three-fold. Furthermore, the relative rates of different gastrulation movements varied with temperature: the speed of blastopore closure increased more slowly with temperature than the speed of the dorsal-to-ventral progression of involution. The changes in the relative rates of different tissue movements can be explained by the viscoelastic deformation model given observed viscoelastic properties, but only if morphogenetic forces increase slowly rather than all at once.     

A systems approach to morphogenesis in <Emphasis Type="Italic">Arabidopsis thaliana</Emphasis>: I. AGNS database

In systems biology, study of a complex and multicomponent system, such as morphogenesis, comprises accumulation of data on morphogenetic processes in databases, classification and logical analysis of this information, and computer simulation of the processes in question using the data accumulated and the results of their analysis. This paper describes realization of the first steps in a systems study of morphogenesis (annotating research papers, compiling information in a database, data systematization, and their logical analysis) by the example of Arabidopsis thaliana, a model object in plant molecular biology. The database AGNS (Arabidopsis GeneNet Supplementary; http://wwwmgs.bionet.nsc.ru/agns) contains the experimentally confirmed information from published papers on specific features of gene expression and phenotypes of wild-type, mutant, and transgenic A. thaliana plants. AGNS queries and logical data analysis with the aid of specially developed software makes it possible to model various morphogenetic processes from gene expression to functioning of gene networks and their contribution to the development of certain traits.     

Studies on the regulation of initiation of chromosome replication in Escherichia coli.

The total initiation frequency of chromosome replication in Escherichia coli is dependent on two factors; the timing or time interval between successive initiations on an individual chromosome (initiation pace) and the number of individual chromosomes which are being replicated per cell. We have examined these parameters in a dnaA^ts, conditionally-lethal, “initiation mutant” of an E. coli K12 strain growing at different permissive temperatures. Our results indicate that at temperatures between 30 and 35 °C the gene product of the dnaA167 allele becomes limiting with respect to the number of replicating chromosomes per cell, which decreases from two at 30 °C to one at 35 °C. However, over this same temperature range it is clear that cell growth is balanced and the initiation pace, as determined from the growth rate, increases with temperature and is indistinguishable from that of the dnaA⁺ parent. These results demonstrate that one can alter the total initiation frequency independently of the initiation pace, indicating the involvement of at least two cellular components in the regulation of initiation. They also suggest that while the dnaA product may be involved in determining the total number of initiation events which can occur per cell per doubling time it does not control the timing or pace at which successive initiation events are triggered on each chromosome, i.e. it is not the “pace-maker” for initiation.