The significance of geographic range size for spatial diversity patterns in Neotropical palms

We examined the effect of range size in commonly applied macroecological analyses using continental distribution data for all 550 Neotropical palm species (Arecaceae) at varying grain sizes from 0.5° to 5°. First, we evaluated the relative contribution of range-restricted and widespread species on the patterns of species richness and endemism. Second, we analysed the impact of range size on the predictive value of commonly used predictor variables. Species sequences were produced arranging species according to their range size in ascending, descending, and random order. Correlations between the cumulative species richness patterns of these sequences and environmental predictors were performed in order to analyse the effect of range size. Despite the high proportion of rare species, patterns of species richness were found to be dominated by a minority of widespread species (∼20%) which contained 80% of the spatial information. Climatic factors related to energy and water availability and productivity accounted for much of the spatial variation of species richness of widespread species. In contrast, species richness of range-restricted species was to a larger extent determined by topographical complexity. However, this effect was much more difficult to detect due to a dominant influence of widespread species. Although the strength of different environmental predictors changed with spatial scale, the general patterns and trends proved to be relatively stabile at the examined grain sizes. Our results highlight the difficulties to approximate causal explanations for the occurrence of a majority of species and to distinguish between contemporary climatic factors and history.     

Top predators determine how biodiversity is partitioned across time and space

Natural ecosystems are shaped along two fundamental axes, space and time, but how biodiversity is partitioned along both axes is not well understood. Here, we show that the relationship between temporal and spatial biodiversity patterns can vary predictably according to habitat characteristics. By quantifying seasonal and annual changes in larval dragonfly communities across a natural predation gradient we demonstrate that variation in the identity of top predator species is associated with systematic differences in spatio‐temporal β‐diversity patterns, leading to consistent differences in relative partitioning of biodiversity between time and space across habitats. As the size of top predators increased (from invertebrates to fish) habitats showed lower species turnover across sites and years, but relatively larger seasonal turnover within a site, which ultimately shifted the relative partitioning of biodiversity across time and space. These results extend community assembly theory by identifying common mechanisms that link spatial and temporal patterns of β‐diversity.     

Island size and bacterial diversity in an archipelago of engineering machines

There is an increasing realization that progress in bacterial ecology can be further advanced by applying theories and models developed in ecology. Consequently, there is a significant need to assess the applicability of such tools, developed specifically for macroorganisms, for investigating the underlying issues that determine bacterial diversity and community assemblage. In this study, we employed the island biogeography species-area model, originally conceived to assess colonization of islands by macroorganisms, to assess bacterial communities colonizing metal-cutting fluids from machines of increasing sump tank size, taking these to be analogous to islands of variable size. This system was selected because it is well studied and compared with other natural bacterial communities has a relatively low (manageable) diversity. Our findings show that island biogeography theory holds for the bacterial communities studied, in that smaller sump tanks contained lower and putatively less stable diversity, and larger sumps had greater diversity and were temporally stable. It was found that the calculated power law indices (i.e. z-values) were similar for all sample sets, and strikingly, typical of those observed in classical ecology. This was not expected as bacteria have significant distinguishing features such as huge population sizes, rapid asexual reproduction and small body size that facilitate dispersal, and are particularly resistant to extinction.     

Island size is not the only consideration. Ranking priorities for the conservation of butterflies on Italian offshore islands

Ecological and historical factors virtually create a unique faunal assemblage on each island. From this perspective every island deserves protection. However, economic limitations usually restrict conservation efforts to particularly important areas. As part of the SLOSS issue (the relative importance of single large or several small areas), there is the long debated question of whether it is better to protect few large areas (islands) or several small areas (islands). Here, we assess the butterfly faunas of the Italian offshore islands, using several biodiversity measures, in order to highlight priorities for conserving butterfly richness, rarity and endemicity. First, the nested pattern of butterfly fauna was investigated to determine the relative importance of large and small islands. Then, residuals were assessed for the species-area relationship and for multiple regressions of richness, rarity and endemicity against geographic variables. Subsequently, two other indices were calculated: Biodiversity Conservation Concern and an index scoring islands in the order that maximizes the cumulative percentage of total, endemic, and rare species. The results clearly indicate that although greatest concern is for the island having the largest butterfly fauna in the sample (Elba), the importance of several small islands should not be ignored. This is primarily due to the substantial impact of source areas and consequently the occurrence of several rare and endemic species occurring on small islands as well as on large islands.     

中国家畜多样性保护的意义

中国是世界上家畜多样性最富有的国家之一。调查和科研工作的资料证明,中国地方品种资源在生态学特征上,融合着种内亚种间混合的品种,具有特殊的经济和气质性状。对野生亲缘种来说,不是简单的延续,而且与野生种之间具有很好的互补性和持续利用的优势。在家畜方面现已具备成熟的种质冷冻技术,对研究群体保存和变异已有可靠的科学手段。由于近年来家畜遗传资源损失严重,其保护工作刻不容缓。     

Genetic diversity is overlooked in international conservation policy implementation

The importance of genetic variation for maintaining biological diversity and evolutionary processes has been recognized by researchers for decades. This realization has prompted agreements by world leaders to conserve genetic diversity, and this is an explicit goal of the Convention on Biological Diversity (CBD). Nevertheless, very limited action has been taken to protect genetic diversity on a global scale. International conservation efforts to halt biodiversity loss focus on habitats and species, whereas little or no attention is paid to gene level variation. By this year, 2010, world leaders have agreed that a significant reduction of the rate of biodiversity loss should have been achieved. However, gene level diversity is still not monitored, indicators that can help identify threats to genetic variation are missing, and there is no strategy for how genetic aspects can be included in biodiversity targets beyond 2010. Important findings and conclusions from decades of conservation genetic research are not translated into concrete conservation action in the arena of international policy development. There is an urgent need for conservation geneticists worldwide to become involved in policy and practical conservation work beyond the universities and research institutions.     

海南岛生物多样性保护优先区评价与系统保护规划

选择海南岛140个濒危物种为指示物种,在物种栖息地评价的基础上,利用系统保护规划工具MARXAN模型进行迭代运算,提出了海南岛生物多样性保护优先区域,并对保护优先区进行评价.结果表明:海南岛保护优先区面积5383.7km2,占海南岛陆地面积的15.6%,集中分布于鹦哥岭、尖峰岭、五指山等林区和北部湿地;在保护优先区中,11个I级指示物种栖息地的保护比例均超过各自栖息地总面积的65%.通过对保护优先区与现有自然保护区的空缺分析,建议扩充尖峰岭保护区群、鹦哥岭-黎母山保护区群、五指山-吊罗山保护区群;新建抱龙林场-林鼻岭-福万岭保护体系;在海南岛北部建立以水源保护为主,同时兼顾珍稀物种保护的水源地保护带.     

Size assessment and growth control: how adult size is determined in insects

Size control depends on both the regulation of growth rate and the control over when to stop growing. Studies of Drosophila melanogaster have shown that insulin and Target of Rapamycin (TOR) pathways play principal roles in controlling nutrition-dependent growth rates. A TOR-mediated nutrient sensor in the fat body detects nutrient availability, and regulates insulin signaling in peripheral tissues, which in turn controls larval growth rates. After larvae initiate metamorphosis, growth stops. For growth to stop at the correct time, larvae need to surpass a critical weight. Recently, it was found that the insulin-dependent growth of the prothoracic gland is involved in assessing when critical weight has been reached. Furthermore, mutations in DHR4, a repressor of ecdysone signaling, reduce critical weight and adult size. Thus, the mechanisms that control growth rates converge on those assessing size to ensure that the larvae attain the appropriate size at metamorphosis.     

Global diversity hotspots and conservation priorities for sharks

Sharks are one of the most threatened groups of marine animals, as high exploitation rates coupled with low resilience to fishing pressure have resulted in population declines worldwide. Designing conservation strategies for this group depends on basic knowledge of the geographic distribution and diversity of known species. So far, this information has been fragmented and incomplete. Here, we have synthesized the first global shark diversity pattern from a new database of published sources, including all 507 species described at present, and have identified hotspots of shark species richness, functional diversity and endemicity from these data. We have evaluated the congruence of these diversity measures and demonstrate their potential use in setting priority areas for shark conservation. Our results show that shark diversity across all species peaks on the continental shelves and at mid-latitudes (30-40 degrees N and S). Global hotspots of species richness, functional diversity and endemicity were found off Japan, Taiwan, the East and West coasts of Australia, Southeast Africa, Southeast Brazil and Southeast USA. Moreover, some areas with low to moderate species richness such as Southern Australia, Angola, North Chile and Western Continental Europe stood out as places of high functional diversity. Finally, species affected by shark finning showed different patterns of diversity, with peaks closer to the Equator and a more oceanic distribution overall. Our results show that the global pattern of shark diversity is uniquely different from land, and other well-studied marine taxa, and may provide guidance for spatial approaches to shark conservation. However, similar to terrestrial ecosystems, protected areas based on hotspots of diversity and endemism alone would provide insufficient means for safeguarding the diverse functional roles that sharks play in marine ecosystems.     

Estimating the genetic diversity and spatial structure of Bulgarian Castanea sativa populations by SSRs: implications for conservation

Sweet chestnut (Castanea sativa Mill.) is a multipurpose species of great ecological and economic importance in southwest Bulgaria. Bulgarian chestnut forests are severely degraded, however, due to the intensive exploitation and bad management that have occurred over the last 2000 years. Given the urgent need to define conservation strategies to preserve the biodiversity of Bulgarian chestnut, we estimated its genetic variability. A set of eight microsatellite primers were used to analyze the genetic diversity and structure of six C. sativa populations distributed throughout the range of species in Bulgaria. Results showed a generally high level of genetic diversity but little divergence among populations. A significant, positive, within-population inbreeding coefficient (Fis) was observed in four populations. A STRUCTURE analysis revealed three genetic clusters. Using a landscape approach, significant genetic barriers among populations were found by integrating genetics with geographical distance. We hypothesize that one population is a relict from a glacial refugium; the structure of the remaining populations is probably the result of a combination of natural events and human impacts. For the purposes of conservation planning, we have identified populations that are particularly rich in diversity and private alleles that are good candidates for preservation.     

Island area,body size and demographic history shape genomic diversity in Darwin's finches and related tanagers

Genomic diversity is the evolutionary foundation for adaptation to environmental change and thus is essential to consider in conservation planning. Island species are ideal for investigating the evolutionary drivers of genomic diversity, in part because of the potential for biological replicates. Here, we use genome data from 180 individuals spread among 27 island populations from 17 avian species to study the effects of island area, body size, demographic history and conservation status on contemporary genomic diversity. Our study expands earlier work on a small number of neutral loci to the entire genome and from a few species to many. We find significant positive correlation between island size and genomic diversity, a significant negative correlation between body size and genomic diversity, and that historical population declines significantly reduced contemporary genomic diversity. Our study shows that island size is the key factor in determining genomic diversity, indicating that habitat conservation is key to maintaining adaptive potential in the face of global environmental change. We found that threatened species generally had a significantly smaller values of Watterson's theta (θ_W = 4N_eμ) compared to nonthreatened species, suggesting that θ_W may be useful as a conservation indicator for at‐risk species. Overall, these findings (a) provide biological insights into how genomic diversity scales with ecological, morphological and demographic factors; and (b) illustrate how population genomic data can be leveraged to better inform conservation efforts.     

Generating spatial data for marine conservation and management

Do fishers know best when it comes to identifying areas with rare and depleted fish species? The global conservation crisis demands that managers marshal all available datasets to inform conservation management plans for depleted species, yet the level of trust placed in local knowledge remains uncertain. This study compares four methods for inferring species distributions of an internationally traded, rare and depleted genus of marine fishes (Hippocampus spp.): the use of (i) fisher interviews; (ii) government research trawls, (iii) scientific diving surveys, and (iv) citizen science contributions. We analyzed these four datasets at the genus and individual species levels to evaluate our conclusions about seahorse spatial occurrence, diversity of species present and the cost effectiveness of sampling effort. We found that fisher knowledge provided more information on our data-poor fish genus at larger spatial scales, with less effort, and for a cheaper price than all other datasets. One drawback was that fishers were unable to provide data down to the species level. People embarking on conservation endeavors for data-poor species may wish to begin with fisher interviews and use these to inform the application of government research, scientific diving, or citizen science programs.     

Mammal diversity and taxonomy in Italy: implications for conservation

The paper attempts to describe Italian mammal diversity in an evolutionary context. With 122 species according latest researches, Italy holds the richest mammal assemblage among European countries. Specific taxa are often represented by clearly distinctive lineages and several of them appear restricted to the Italian peninsula. Poor knowledge of taxonomy and uncritical application of IUCN threat categories at the national level could produce a flawed set of conservation priorities, independently from the rigorous application of the proposed guidelines for national Red List assessments. Furthermore, classical conservation assessments and protective legislation only consider traditionally named taxa, often privileging insular taxa of artificial origin but neglecting most of the results of genetic and molecular studies on intraspecific variation. The aim of the present work is to outline the need to incorporate phylogenetic and biogeographic data in the assessment of conservation priorities among mammals in Italy, in order to maximise the national contribution to biodiversity conservation in Europe. To this end, distribution, threat status, intraspecific and supraspecific taxonomy of the native mammal fauna should be analysed in a global context. Phylogeographic patterns emerging from previous studies indicate the general inadequacy of continental European populations serving as sources for re-stocking or re-introductions operations in Italy and the other European peninsulas. Thus the importance of integrating international guidelines on reintroductions with a clear understanding of national biogeographical peculiarities is highlighted.     

Practical importance for conservation of insect diversity in China

Insects are one of the most important groups in the natural world. They affect the life and welfare of humans in many different ways. While some insects are referred to as pests, others are beneficial to humans. For example, they may serve a function as pollinators of many cultivated plants, as natural enemies of harmful species, or as producers of valuable materials such as honey and silk. Several insect species, however, are not currently known as being harmful or beneficial. Nevertheless they are extremely important as essential components of both natural and modified ecosystems. In China, only 1% of insect species described are major pests. The majority of insects are either neutral or beneficial to humans. China, with its vast territory, diverse climate and ecosystems, is amongst the richest countries in insect diversity. However, as a result of the economic and population growth and development, Chinas insect diversity is now faced with habitat degradation, species extinction, and a decline in the natural enemies of harmful pests. These problems are due to the expansion of agriculture, urbanization, industrialization, pollution, mining, tourism, introduced species, hunting, and the illegal trade in endangered species. In order to exploit the beneficial components of insects as biological resources and to effectively control their harmful aspects, many national strategies, legal actions and capacity-building activities have been developed and implemented. These efforts work towards the goal of insect diversity conservation in China.     

海南岛生态系统土壤保持空间分布特征及生态经济价值评估

在地理信息系统的支持下 ,采用通用土壤流失方程 ( USLE)及其修改式估算了海南岛现实土壤侵蚀量和潜在土壤侵蚀量 ,得到了海南岛生态系统土壤保持的空间分布特征 ,研究表明 :中部山区的生态系统的土壤保持能力较其它地区大 ,全岛年土壤保持总量为 1 .58× 1 0 7t,并利用市场价值法 ,机会成本法和影子工程法评价了各类型生态系统的土壤保持价值。海南岛年土壤保持总价值为 74 92 .4 1万元 ,其中减少土地废弃价值为 4 9.37万元 ,保护土壤肥力价值为 72 74 .2 2万元 ,减轻泥沙淤积价值为 1 68.82万元     

Facing complexity in tropical conservation: how reduced impact logging and climatic extremes affect beta diversity in tropical amphibian assemblages

Biodiversity in pristine forest biomes is increasingly disturbed by human activity. Drivers such as logging and climate extremes are thought to collectively erode diversity, but their interactions are not well understood. However, ignoring such complexities may result in poor conservation management decisions. Here, we present the first study dealing with the complexity arising from the effects of interactions of two increasingly important disturbance factors (selective logging and climatic extreme events) on beta diversity patterns at different scales. Specifically, we examined extensive amphibian assemblage datasets obtained within a quasi‐experimental pre‐/post‐harvesting scheme in the lowland rainforests of Central Guyana. Changes in small‐scale patterns of beta diversity were not detectable at the higher landscape level, indicating that local‐scale dynamics are more informative for evaluating disturbance impacts. The results also underscore the importance of including abundance data when investigating homogenization or heterogenization effects, which should be considered when designing post‐logging impact assessments and selecting impact indicators. Moreover, logging should be regarded as a multifaceted driver that contributes to changes in biodiversity patterns in different ways, depending on interactions with other drivers. The effects of extreme climate events were significantly more pronounced in unlogged forest, while logged forest assemblages appeared buffered due to the presence of novel habitats. Imprudent post‐logging renaturation measures may thus counteract conservation targets. These findings highlight the fact that indicator bias and unaccounted interactions between multiple drivers can lead to misguided management strategies.     

Illegitimate recombination is a major evolutionary mechanism for initiating size variation in plant resistance genes

Current models for the evolution of plant disease resistance (R) genes are based on mechanisms such as unequal crossing-over, gene conversion and point mutations as sources for genetic variability and the generation of new specificities. Size variation in leucine-rich repeat (LRR) domains was previously mainly attributed to unequal crossing-over or template slippage between LRR units. Our analysis of 112 R genes and R gene analogs (RGAs) from 16 different gene lineages from monocots and dicots showed that individual LRR units are mostly too divergent to allow unequal crossing-over. We found that illegitimate recombination (IR) is the major mechanism that generates quasi-random duplications within the LRR domain. These initial duplications are required as seeds for subsequent unequal crossing-over events which cause the observed rapid increase or decrease in LRR repeat numbers. Ten of the 16 gene lineages studied contained such duplications, and in four of them the duplications served as a template for subsequent repeat amplification. Our analysis of Pm3-like genes from rice and three wheat species showed that such events can be traced back more than 50 million years. Thus, IR represents a major new evolutionary mechanism that is essential for the generation of molecular diversity in evolution of RGAs.