一种适于植物幼胚mRNA整体原位杂交的方法

A mRNA whole-mount in situ hybridization method is reported here for quick, direct analysis of the spatial and temporal mRNA expression patterns in plant young embryos. A cDNA clone THE3 (tobacco heart embryo 3) was isolated by differential screening from tobacco (Nicotiana tabacum L.) heart embryo cDNA library as compared with the globular embryo cDNA library. The distribution of THE3 mRNA in tobacco heart embryos and globular embryos was investigated by a whole-mount in situ hybridization technique, showing that THE 3 is preferentially expressed in heart embryos.     

Construction and Analysis of cDNA Libraries from Proembryos and just Differentiating Young Embryos in Rice

Two cDNA libraries were constructed from microdissected 214 rice proembryos (2-3 d after pollination) and 121 just differentiating young embryos (3-5 d after pollination) respectively through RT-PCR technique. The primary libraries had a total of 3.7×10 phages for the proembryos and a total of 2.5×10 phages for the just differentiating young embryos, in which 96% of the phages were recombinants. Insert sizes ranging from 400 bp to 3?500 bp were obtained. All of theabove mentioned accorded with the general requirements of cDNA library construction.     

A gene expressed preferentially in the globular stage of somatic embryogenesis encodes elongation-factor 1 alpha in carrot.

We have isolated cDNA of genes that are preferentially expressed during somatic embryogenesis of carrot (Daucus carota L.) by differential screening of globular embryos and cells that are dividing in an unorganized manner. As a result of Northern-blot analysis, one of the genes identified in this way, which we refer to as CEM1, was found to be expressed at high levels in somatic embryos at the globular and heart-shaped stages. In-situ hybridization using globular embryos revealed that the mRNA transcribed from CEM1 was located preferentially in the spherical region of the globular embryo. A homology search using the amino acid sequence deduced from the nucleotide sequence of the CEM1 cDNA revealed that CEM1 encodes the eukaryotic translational elongation-factor 1 alpha.     

Chlorophyll and cutin in early embryogenesis in Capsella,Arabidopsis, and Stellaria investigated by fluorescence microscopy

Advanced globular embryos of Capsella and early heart-shaped embryos of Arabidopsis begin to show chlorophyll fluorescence. It is not present in the suspensor, epiphysis, radicle and embryo of Stellaria. Cutin fluorescence appears on the protoderm of all advanced globular embryos. Fluorescence disappears during the early torpedo stage. It is not present on suspensors.     

龙眼体胚发生相关未知蛋白DlUP-3基因的克隆与表达分析

在龙眼体胚发生早期的蛋白质组学研究中,发现1个体胚发生相关未知蛋白DlUP-3,通过简并引物结合RACE技术进行其基因全长序列克隆。结果显示:(1)克隆到的龙眼体胚发生相关未知蛋白基因DlUP-3的全长cDNA序列为1 681bp,开放阅读框由1 017个核苷酸组成,编码338个氨基酸(GenBank登录号为GQ167202)。(2)生物信息学分析发现,该基因推导蛋白分子量为36 854.2Da,pI为9.05;该蛋白为Ras蛋白质家族成员,具有ATP/GTP-binding site motif A(P-loop)结合位点和1个典型的Ras_like_GTPase superfamily组件,无典型信号肽结构,但有跨膜螺旋的亲水性蛋白;不规则卷曲是其最大量的结构元件,散布于整个蛋白质中。(3)实时荧光定量PCR分析显示,该基因在龙眼体胚发生过程中均有表达,其中以胚性愈伤组织阶段表达量最低,而球形胚阶段最高。研究表明,DlUP-3基因在龙眼体胚发生过程尤其是球形胚阶段有重要的作用,为进一步研究该基因在龙眼体胚发生过程中的功能奠定了基础。     

Improving genetic transformation of European chestnut and cryopreservation of transgenic lines

The aim of the present work was to study the effect of the developmental stage of the somatic embryos and of the genotype on the genetic transformation of embryogenic lines of European chestnut (Castanea sativa Mill.) and the cryopreservation of the embryogenic lines that are generated. As an initial source of explants in the transformation experiments, it was found that the use of somatic embryos isolated in the globular stage or clumps of 2–3 embryos in globular/heart-shaped stages was more effective (30%) than when embryos at the cotyledonary stage were used (6.7%). All of the seven genotypes tested were transformed, and transformation efficiency was clearly genotype dependent. Three transgenic lines were successfully cryopreserved using the vitrification procedure, and the stable integration of the uidA gene into the transgenic chestnut plants that were regenerated subsequent to cryopreservation was demonstrated.     

cDNA Libraries from Single Human Preimplantation Embryos

In this paper, the construction, evaluation, and application of cDNA libraries from eight unfertilized oocytes and single four-cell-, seven-cell-, and blastocyst-stage embryos are described. Rapid, reproducible, and efficient procedures for the construction of PCR-based cDNA libraries from fewer than 10 cells were first developed in small populations of fibroblast cells. The human embryo libraries display complexities sufficient (between 10⁵and 10⁶clones) to represent the entire active gene population at these early stages of human development. The ubiquitous cytoskeletal elements, β-actin, keratin-18, and α-tubulin, were detected at the expected frequency. Sequencing of consecutively picked random clones, without selection, showed the presence of a variety of sequences, such as the human transposable element, LINE-1 andAlurepeat sequences, housekeeping genes, and tissue-specific genes, such as α-globin and FMR-1. In addition to cDNAs corresponding to known ESTs (expressed sequence tags) in the GenBank and dbEST databases, a high proportion of novel sequences were detected. Applications of the libraries to several areas of interest, such as expression of CpG-island-containing “tissue-specific” genes, developmental genes expressed in a stage-specific manner, and a search for monoallelic expression of imprinted genes, are described. The libraries are a valuable resource for the study of gene expression during human preimplantation development and obviate the need for research on the human embryos themselves.     

Somatic embryogenesis in the medicinal legume <Emphasis Type="Italic">Desmodium motorium</Emphasis> (Houtt.) Merr.

An efficient protocol was established for regeneration of Desmodium motorium via somatic embryogenesis. Embryogenic calli were induced from cotyledon segments (6 mm, 16 days old) lacking embryo axis, excised from seedlings grown in vitro on Murashige and Skoog (MS) medium supplemented with indole-3-acetic acid (IAA) (2.9 μM) in combination with 6-benzyladenine (BA) (4.44 and 8.88 μM). Differentiation of embryogenic calli into globular and heart-shaped somatic embryos was achieved on transfer to hormone-free MS medium. When incubated for 4 days on MS medium supplemented with BA (8.88 μM), 95% of the globular and heart-shaped somatic embryos matured into torpedo and cotyledonary stages with minimum (10%) abnormalities. Modified MS basal medium without hormones and containing half-strength macronutrients and 0.88 M sucrose was suitable for germination of mature somatic embryos. Regenerated plantlets were successfully transferred to earthen pots with survival rate of 50%. Secondary embryogenesis was observed when pre-existing somatic embryos at globular and heart-shaped stages were cultured on MS medium supplemented with various concentrations of BA, adenine sulphate (AdS) and abscisic acid (ABA) individually.     

龙眼体细胞胚胎发生过程中DlWUS的克隆与表达分析

以龙眼‘红核子’LC2悬浮细胞系诱导的胚性愈伤组织为基本材料,按照龙眼体细胞胚胎同步化方法诱导获得龙眼体胚不同阶段材料,并以龙眼体细胞胚胎发生不同阶段混合材料作为试验材料,采用RT-PCR结合RACE技术分离并克隆龙眼中编码同源异型结构域蛋白的转录因子WUSCHEL(简称DlWUS)的cDNA全长及DNA序列,并进行序列分析与表达分析。结果表明:DlWUS的cDNA全长1 110bp,开放阅读框(ORF)858bp,共编码285个氨基酸(GenBank登录号为KM017506),DlWUS的DNA包含2个内含子。序列分析表明,DlWUS是一个不稳定的亲水蛋白,不含信号肽,亚细胞定位于细胞核,具跨膜结构和Homeodomain超级家族的保守结构域以及WUS转录因子家族特有的WUS box和EAR-like结构域,推测该目的基因确实为WUS转录因子。系统进化分析显示,龙眼DlWUS与脐橙WUS归为一个分支,亲缘关系较近。实时荧光定量PCR分析结果表明,在龙眼体细胞胚胎发生整个过程中,DlWUS均有表达,但仅在球形胚时期表达量较高,说明DlWUS可能主要在球形胚阶段发挥作用,并且在一定浓度范围内,外源施加IAA和GA3能够促进DlWUS基因的表达,而外源施加SA则抑制DlWUS基因的表达。     

Tctex3, related to Drosophila Polycomblike, is expressed in male germ cells and mapped to the mouse t-complex

Tctex3 showing restricted expression in male germ cells has been isolated during the process of chromosome walking in the mouse t-complex region. The total sequence of Tctex3 cDNA predicts a protein of 580 amino acids with two C4HC3 type PHD fingers. The region containing this conserved motif is shared among members of the Polycomblike proteins that include the mouse M96 and Drosophila Polycomblike. A partial cDNA for a human homolog of Tctex3, HUTEX3, has also been isolated. Mouse Tctex3 gene was mapped adjacent to Tsc2 gene on mouse Chromosome (Chr) 17, and HUTEX3 was located closely to HSET gene in the HLA class II region of chromosome 6. Received: 10 April 1998 / Accepted: 22 June 1998     

ORIGIN AND ONTOGENESIS OF SOMATIC EMBRYOS IN HEYEA BRASILIENSIS (EUPHORBIACEAE)

In Hevea, currently described culture conditions allow the induction of two modes of embryogenesis in callus formed on excised portions of the internal integument of immature seeds. One mode is of unicellular origin and is transitory, only resulting in the production of globular proembryos. The other is of multicellular origin and produces embryos. Specific culture conditions appear to favor one or the other mode of development in a given genotype. The ontogenesis of embryos of multicellular origin bypasses the classical stages of zygotic embryogenesis. The structural abnormalities observed in most somatic embryos are probably responsible for the low germination rates obtained.     

Gene Control in Somatic Embryos of Digitalis lanata: Expression of the β-Glucuronidase Gene Fused to a Plastocyanin Promoter

Digitalis lanata was transformed by agrobacteria-mediated gene transfer with a chimeric reporter gene encoding for β-glucuronidase (CUS) from Escherichia coll under the control of the plastocyanin 3 (Pc3) promoter from Spinada oleracea (Pc3::uidA fusion gene). Transformed cell lines were regenerated to plants via somatic embryos. CUS activity was determined fluorometrically and histochemically. The Pc3::uidA fusion gene was expressed in the late globular and bipolar stages of somatic embryos. Expression started in globular embryos (stage-1-globules) in that part of the parenchymatic tissue which later on formed the cotyledons. No GUS activity was detectable in the parenchymatic tissue forming the root pole, in cells of the developing procambium or in epidermal cells. These tissues were free of GUS activity also in bipolar embryos. The parenchymatic cells of the cotyledons and the primary cortex of the hypocotyl of germinating embryos showed GUS activity, in contrast to the epidermal cells and the cells of the central cylinder.     

Molecular characterization of tobacco cDNAs encoding two small GTP-binding proteins

We have isolated two cDNAs encoding small GTP-binding proteins from leaf cDNA libraries. These cDNAs encode distinct proteins which show considerable homology to members of the ras superfamily. Np-ypt3, a 1044 bp long Nicotiana plumbaginifolia cDNA, encodes a 24.4 kDa protein which shows 65% amino acid sequence similarity to the Schizosaccharomyces pombe ypt3 protein. The N-ypt3 gene is differentially expressed in mature flowering plants. Expression of this gene is weak in leaves, higher in stems and roots, but highest in petals, stigmas and stamens. Nt-rab5, a 712 bp long Nicotiana tabacum SR1 cDNA, encodes a 21.9 kDa protein which displays 65% amino acid sequence similarity to mammalian rab5 proteins. The expression pattern of the Nt-rab5 gene is very similar to that of the Np-ypt3 gene. The Nt-rab5 gene is virtually not expressed in leaves, higher in stems and roots, and highest in flowers. Both the Nt-rab5 and Np-ypt3 proteins were expressed in Escherichia coli and shown to bind GTP.     

龙眼体胚CDC48基因的克隆、原核表达及其在体胚发生过程中的表达分析

为探讨龙眼(Dimocarpus longan)体胚CDC48基因的表达方式,采用RT-PCR和RACE方法,从龙眼胚性愈伤组织中克隆得到1条长度为2620 bp、含有完整开放阅读框的DlCDC48基因cDNA序列(GenBank登录号:EU606206)和长度为2418 bp的DNA序列(GenBank登录号:FJ590953)。DlCDC48编码1个含有805个氨基酸的蛋白质。DlCDC48基因不含内含子。生物信息学分析表明:DlCDC48蛋白为不具跨膜结构域的亲水性胞质蛋白,不具有信号肽,定位在细胞核;与其他植物的CDC48有较高的同源性。将DlCDC48基因构建成原核表达载体,经IPTG诱导表达了1个分子量约为89 kD的蛋白。利用实时荧光定量PCR(qPCR)技术,DlCDC48在龙眼体胚发育过程中的各个阶段均有表达,其中球形胚时的表达量最低,胚性紧实球形结构阶段的表达量最高。这为进一步研究CDC48基因在植物体胚发生中的作用奠定基础。     

Glutathione metabolism and antioxidant responses during Eleutherococcus senticosus somatic embryo development in a bioreactor

Compared to non-embryogenic callus, proembryonic mass, globular, and heart-shaped embryos of Eleutherococcus senticosus had higher levels of endogenous reduced glutathione (GSH). GSH content declined during the course of the embryo development (torpedo and cotyledon). Similarly, glutathione reductase that is involved in the recycling of GSH providing a constant intracellular level of GSH was also higher in globular and heart-shaped embryos. The transient increase in GSH contents also correlated with the changes in measured γ-glutamylcysteine synthetase activity over the same period. The endogenous levels of oxidized glutathione showed similar trend during development of the somatic embryos, whereas it declined in maturing somatic embryos. A pronounced increase in glutathione-S-transferase, glutathione peroxidase, catalase, and guaiacol peroxidase activity was observed during somatic embryo maturation. Ascorbate-glutathione cycle enzymes (ascorbate peroxidase; dehydroascorbate reductase and monodehydroascorbate reductase) activities also induced indicated that antioxidant enzymes played an important role during embryo development. These results suggested that the coordinated up-regulations of the antioxidant enzymes and glutathione redox system provide protection during somatic embryo development in E. senticosus. Antioxidant responses through alterations of the glutathione redox systems, have been described in the present studies have a significant role in somatic embryo development.     

Dormancy in somatic embryos and seeds ofVitis: changes in endogenous abscisic acid during embryogeny and germination

Abscisic acid (ABA) in extracts of somatic embryos and seeds of Gloryvine (Vitis vinifera L.xV. rupestris Scheele) was measured by gas chromatography-mass spectrometry-selected ion monitoring using deuterated ABA, (±)-[C-3Me-²H₃]ABA, ([²H₃]ABA) as internal standard. The ABA content increased rapidly during embryogeny (0.035 ng/embryo at the globular stage to 0.22 ng/embryo at the mature stage). The level of ABA in the tissues of somatic embryos, expressed in ng/mg dry weight, decreased from the globular stage (0.76 ng/mg) to the mature stage (0.25 ng/mg). Chilling (4° C) induced normal germination of seeds and mature somatic embryos and precocious germination of globular, heart-shaped and torpedoshaped somatic embryos. In all cases chilling led to a marked reduction in endogenous ABA. Exogenous (±)-ABA inhibited the germination of chilled somatic embryos.Abbreviations ABA abscisic acid - [²H₃]ABA (±)-[C-3Me-²H₃]-abscisic acid - BHT 2,6-di-t-butyl-4-methylphenol - GC-MS gas chromatography-mass spectrometry - Me-ABA and Me-[²H₃]ABA methyl esters of ABA and [²H₃]ABA, respectively - SIM selected ion monitoring     

In vitro culture of ovules ofTriticum aestivum at early stages of embryogenesis

Because most of the intergenericGramineae embryos abort before they can be isolated and cultured, our object was to grow ovules at an early stage of embryogenesis. Ovules were at size 1 to 7 mm. The youngest stages represented ovules containing several-celled proembryos; the oldest stage consisted of embryos at the level of differentiation of the organs. 1357 ovules were jointly inoculated in 12 different media of which only 3 appeared to be most suitable for the growth and differentiation of globular proembryos. From several-celled proembryos (ovules at the size of 1.5 – 2.5 mm) only compact calluses developed. The capability of proembryos to differentiate and to form fully developed embryos and consequently plants started when the ovules were inoculated at the size of 2.5 – 3.0 mm. Since the medium plays an important role in the process of differentiation of proembryos, the application of similar culture conditions is suggested for the in vitro culture of haploid or hybrid proembryos obtained among wide crosses inGramineae.List of abbreviations COC Coconut milk - BAP 6-benzylaminopurine - YE Yeast extract - CH Casein hydrolysate - KT Kinetin - ZT Zeatin     

A revision of the human XIST gene organization and structural comparison with mouse Xist

The XIST gene plays an essential role in X Chromosome (Chr) inactivation during the early development of female humans. It is believed that the XIST gene, not encoding a protein, functions as an RNA. The XIST cDNA is unusually long, as its full length is reported to be 16.5 kilobase pairs (kb). Here, comparison of sequences from the genomic interval downstream to the 3′ end of the human XIST gene against the human EST database brought to light a number of human EST sequences that are mapped to the region. Furthermore, PCR amplification of human cDNA libraries and RNA fluorescence in situ hybridization (RNA-FISH) demonstrate that the human XIST gene has additional 2.8 kb downstream sequences which have not been documented as a part of the gene. These data show that the full-length XIST cDNA is, in fact, 19.3 kb, not 16.5 kb as previously reported. The newly defined region contains an intron that may be alternatively spliced and seven polyadenylation signal sequences. Sequences in the newly defined region show overall sequence similarity with the 3′ terminal region of mouse Xist, and three subregions exhibit quite high sequence conservation. Interestingly, the new intron spans the first two subregions that are absent in one of the two isoforms of mouse Xist. Taken together, we revise the structure of human XIST cDNA and compare cDNA structures between human and mouse XIST/Xist. Received: 3 August 1999 / Accepted: 15 November 1999