甘蓝型油菜千粒重性状的QTL初步定位研究

千粒重是油菜重要的产量相关性状之一,构建油菜遗传连锁图谱是研究其产量性状基因的前提。本研究利用小孢子培养技术,选育出了甘蓝型油菜大粒品系(G-42)和小粒品系(7-9)的纯合DH系DH-G-42和DH-7-9,其千粒重分别为6.24 g和2.42 g,二者比值达2.58。以DH-G-42为母本、DH-7-9为父本,构建了含190个单株的F2遗传作图群体,利用SSR和SRAP标记技术绘制遗传连锁图谱,该图谱共包含20个连锁群,涉及128个SSR标记和100个SRAP标记,图谱总长1546.6cM,标记间平均图距为6.78cM。本研究共检测到3个与千粒重性状相关的QTL,分别位于A9和C1连锁群,其中qSW-A9-1和qSW-A9-2贡献率分别达到10.98%和27.45%,均可视为控制粒重的主效QTL。本研究为后续进行油菜千粒重性状QTL的精细定位分析、分子标记辅助选择育种及新基因的克隆等奠定了基础。     

甘蓝型油菜遗传图谱的构建及单株产量构成因素的QTL分析

采用常规品系04-1139与高产多角果品系05-1054构建的F2代群体为作图群体, 运用SSR(Simple sequence repeat)和SRAP(Sequence-related amplified polymorphism)构建分子标记遗传图谱并对甘蓝型油菜单株产量构成因素进行QTL分析。遗传图谱包含200个分子标记, 分布于19个连锁群上, 总长度1 700.23 cM, 标记间的平均距离8.50 cM。采用复合区间作图法(Composite interval mapping, CIM)对单株产量构成因素(单株有效角果数、每果粒数和千粒重)进行QTL分析, 共检测到12个QTL: 其中单株有效角果数4个QTL, 分别解释表型变异为35.64%、12.96%、28.71%和34.02%; 每果粒数获得5个QTL, 分别解释表型变异为8.41%、7.87%、24.37%、8.57%和14.31%; 千粒重获得３个QTL, 分别解释表型变异为2.33%、1.81%和1.86%。结果表明: 同一性状的等位基因增效作用可以同时来自高值亲本和低值亲本; 文章中与主效QTL连锁的标记可用于油菜产量性状的分子标记辅助选择和聚合育种。     

甘蓝型油菜若干农艺性状与单株产量的关系分析

以38个甘蓝型油菜品种为材料,对单株产量、有效分枝部位高度、主轴花序长度等11个农艺性状进行了方差分析、通径分析和聚类分析．结果显示:所有调查性状在品种间存在显著的差异;主花序长度、主序有效角果数与单株产量都有显著的遗传相关性,两者都通过有效分枝部位高度对单株产量产生较大的正向间接作用;有效分枝部位高度对单株产量的影响也较显著,高产品种具有相对较高的有效分枝部位高度;总角果数对单株产量的直接遗传通径系数虽小,但它具有最大的直接表型通径系数,它通过主序有效角果数和有效分枝数对单株产量产生了两个较大的间接作用;要获得3130kg/hm~2的产量,重点应具备果多、枝多的特征,总角果数不少于657个,有效分枝数不少于18个．     

芥菜型多室油菜与甘蓝型油菜的种间远缘杂交

通过对芥菜型多室油菜与甘蓝型油菜种间杂交 以下简写为芥×甘或甘×芥 的结实性、交配性以及不同甘蓝型油菜对交配性的影响等研究发现:芥、甘正反交形成的饱满种子数较少,其形成种子的能力弱,但是芥×甘与甘×芥杂交相比,芥×甘形成饱满种子的能力较强,受精能力以及杂种胚胎的发育能力也强,在授粉后的子房发育上二者无显著差异.所以,芥菜型多室油菜与甘蓝型油菜种间杂交创建新资源时宜采用芥×甘杂交方式;不同甘蓝型油菜品种与芥菜型多室油菜正反交的结角率、受精指数、结籽指数和可交配指数均不相同,但可交配指数的变异系数最大.因此,筛选可交配性强的甘蓝型基因型应着眼于可交配指数高的甘蓝型油菜亲本材料,根据本试验结果,芥菜型多室油菜与甘蓝型油菜93-221-1杂交形成的杂种胚具有较强的可发育性.     

甘蓝型油菜千粒重性状的QTL定位分析

该研究利用油菜双单倍体株系(348份)群体和已构建的遗传连锁图谱,采用复合区间作图法,对2009~2013年连续5年的千粒重性状表型数据进行QTL初步定位和分析,结果共获得46个显著性千粒重QTL,主要分布在A7、C1和C6等11条染色体上;其中qTSW-09 DL11-1的表型变异最高(19.63%),qTSW-11 DL9的表型变异最小(2.73%)。通过元分析方法将所获得的46个QTL进行整合,结果显示:cqTSW-C1-2的表型变异最大(10.64%),并发现多个整合后的一致性QTL能够在连续多年试验中被检测到,其中cqTSW-C1-3连续5年被检测到,表明控制千粒重的QTL在种植环境中能够稳定表达;同时,新发现位于C1染色体上的千粒重主效QTL cqTSW-C1-2,解释表型变异达到10.64%。油菜千粒重性状的QTL分析和主效QTL的获得,为进一步实现油菜大籽粒的分子育种和高产新品种的培育提供了重要的理论指导。     

一个与甘蓝型油菜无花瓣性状基因连锁的RAPD标记

以无花瓣和有花瓣姊妹系油菜为材料,结合近等基因系法和集群分离法这两种分子标记策略．对184个RAPD随机引物进行筛选,得到了与控制花瓣性状基因紧密连锁的分子S352-580,并通过无花瓣品系和有花瓣品种对所得标记进行了验证。     

甘蓝型油菜羧基转移酶α亚基全长cDNA的克隆及在大肠杆菌中表达

通过分析拟南芥与大豆的羧基转移酶α亚基的cDNA序列,运用RT-PCR、RACE和基因组步行(Genome walking)三种技术进行组合克隆,首次从油菜开花后20～29天的幼胚中,克隆到质体定位的羧基转移酶α亚基的全长cDNA.同源性分析表明,其开放阅读框(ORF)编码的氨基酸序列与拟南芥、大豆的羧基转移酶α亚基的同源性分别为85%、59%.将此cDNA去除叶绿体转运肽编码序列的成熟肽编码序列,克隆到表达载体pHBM625上,蛋白质印迹分析,它在大肠杆菌中成功表达.     

甘蓝型油菜赤霉素受体基因的克隆与表达

采用同源克隆技术从甘蓝型油菜中克隆到1个赤霉素受体基因,命名为BnGID1B(GenBank登录号为HQ589349).该基因含有1个内含子和2个外显子,其cDNA序列全长1 077 bp,编码358个氨基酸,推测蛋白质的相对分子量是40 203.4 Da,理论等电点为6.26.序列比对结果显示,BnGID1B基因与拟南芥GID1B基因核苷酸序列的相似性为86.3%,氨基酸序列的相似性为91.64%.实时荧光定量PCR分析表明,BnGID1B基因在苗期不同组织以及不同激素处理下的表达量有所不同,主要在根中表达,下胚轴中的表达量明显低于根,可见该基因具有一定程度的组织表达特异性.     

拟南芥角果发育和开裂的调控机制及在油菜育种中的应用

十字花科芸苔属甘蓝型油菜(Brassica napus)在角果发育成熟过程中,因角果开裂种子散落引起产量损失最低达20%左右,最高可达50%左右。模式植物拟南芥在角果形态和开裂机制方面与甘蓝型油菜具有相似性,角果开裂主要与果瓣、胎座框和果瓣边缘层的细胞发育有关。通过对拟南芥角果发育期间基因对果瓣、胎座框和果瓣边缘层的识别和发育进行综述,明确了拟南芥角果发育和开裂的基因调控机制,提出了从模式植物到大田作物甘蓝型油菜抗裂角育种的新策略。     

甘蓝型油菜A基因组候选BAC克隆的筛选及其插入片段大小分析

选择甘蓝型油菜A基因组10个连锁群上特有的85个SSR分子标记,合成其引物序列,采用四维PCR法筛选甘蓝型油菜-新疆野生油菜二体异附加系BAC文库,成功筛选到甘蓝型油菜A基因组39个BAC克隆,其插入片段介于50～300 kb之间,平均为120 kb。甘蓝型油菜A基因组10个连锁群BAC克隆的获得,对后续开展甘蓝型油菜A基因组染色体识别、基因染色体定位、遗传距离与物理距离间关系分析等均具有重要价值。     

Conserved structure and function of the Arabidopsis flowering time gene CONSTANS in Brassica napus

The Arabidopsis thaliana CONSTANS (CO) gene which promotes flowering in long days was recently isolated by chromosome walking. The mapping of QTLs controlling flowering time in Brassica species has identified genomic regions that contain homologues of the CO gene. Four genes homologous to the Arabidopsis CO gene were isolated from a pair of homoeologous loci in each of two doubled-haploid Brassica napus lines displaying different flowering times, N-o-1 and N-o-9. The four genes, BnCOa1, BnCOa9, BnCOb1 and BnCOb9, are located on linkage groups N10 and N19, and are highly similar to each other and to the Arabidopsis CO gene. Two regions of the proteins are particularly well conserved, a N-terminal region with two putative zinc fingers and a C-terminal region which may contain a nuclear localization signal. All four genes appear to be expressed in B. napus. The BnCOa1 allele was shown to complement the co-2 mutation in Arabidopsis in a dosage-dependent manner causing earlier flowering than in wild type under both long- and short-day conditions.     

Differential response of oilseed rape (Brassica napus L.) cultivars to low boron supply

Three experiments were carried out on an alluvial sandy loam (Udifluvent) at Tonglu, Zhejiang Province, P.R. China from 1992 to 1995, to determine the genotypic range in boron (B) efficiency of 16 oilseed rape (Brassica napus L.) cultivars, to identify the B-efficient cultivars and to identify specific responses which can be utilised for selection in a breeding program. The 16 cultivars which included high-quality and conventional types differed significantly in survival, plant height, leaf area, shoot dry weight and seed yield; however, the ranking of the cultivars for their seed yield or other plant traits differed with B treatment. With severe B deficiency (CaCl2 extractable B < 0.26 mg/kg) and no boron applied, none of the cultivars exhibited significant B efficiency, with seed yield <300 kg/ha. With moderate B deficiency (CaCl2 extractable B 0.34 mg/kg or 0.17 kg B/ha applied), seed yield varied significantly among the cultivars from 397 to 1889 kg/ha in year 1 and from 616 to 1260 kg/ha in year 3. Zhongyou 821 and 92-13 were the most B-efficient and Wanyou 324, Huashuang 2 and Su 2051 were the most B-inefficient cultivars under moderate B deficiency. Significant differences were found among the cultivars in leaf B concentration; however, there was no close relationship between leaf B concentration and seed yield responses to B of oilseed cultivars. Of all the growth parameters measured, leaf area was the early indicator best correlated with subsequent seed yield and may be useful for evaluating the response of cultivars to low B supply. Contrary to current opinion, it was also found that high-quality oilseed rape cultivars were not all sensitive to low B supply nor were all conventional cultivars B-efficient.     

不同硼效率甘蓝型油菜品种细胞壁中硼的分配

应用不同硼效率甘蓝型油菜品种 ,研究硼在细胞壁中的分配。硼主要结合在细胞壁中 ,缺硼显著提高硼在细胞壁中的分配比例。根系细胞壁硼含量显著低于叶片 ,但根系细胞壁硼占根系总硼量之比例显著高于叶片。同一品种根系及其细胞壁、老叶细胞壁硼含量受生育期影响较小 ,新叶及其细胞壁、老叶硼含量受生育期影响较大。在正常供硼条件下 ,硼高效品种根系细胞壁和叶片细胞壁硼含量均低于低效品种 ;正常和缺硼条件下 ,硼高效品种细胞壁硼占器官总硼量之比例均低于低效品种。说明硼低效品种需较多的硼构建细胞壁。     

Genome-Wide Identification of Brassica napus PEN1-LIKE Genes and Their Expression Profiling in Insect-Susceptible and Resistant Cultivars

Recently, it has been reported that a gene (PEN1) in Arabidopsis thaliana is highly resistant to Plutella xylostella. We screened all the homologous genes of PEN1 in Arabidopsis thaliana and found that the motif of these genes was very conserved. At present, few insect resistance genes have been identified and characterized in Brassica napus. Therefore, we screened all the homologous genes containing this motif in the Brassica napus genome and systematically analyzed the basic information, conserved domain, evolutionary relationship, chromosomal localization and expression analysis of these genes. In this study, 12 PEN1 homologous genes were identified in the Brassica napus genome, which is more than the number in Arabidopsis thaliana. These genes are unevenly distributed on the 12 chromosomes in Brassica napus. Furthermore, all the PEN1 homologous genes contained light responsiveness elements, and most of the genes contained gibberellin-responsive elements, meJA-responsive elements and abscisic-acid-responsive elements. The results will provide a theoretical basis for screening insect resistance genes from the genome of Brassica napus and analyzing the molecular mechanism of insect resistance in Brassica napus.     

油菜分子标记图谱构建及抗菌核病性状的QTL定位

以油菜品种０８５（抗菌核病）与湘油１３号杂交得到的Ｆ２代作为作图群体,以ＲＡＰＤ标记来构建油菜连锁图谱。通过对３００个１０－ｍｅｒ随机引物的筛选,共获得２００个多态性ＲＡＰＤ位点。经Ｍａｐｍａｋｅｒ／ＥＸＰ３．０软件处理,构建了１张含１９３个标记位点、１９个连锁群、覆盖长度为１３２４ｃＭ的连锁图谱。在此基础上利用Ｍａｐｍａｋｅｒ／ＱＴＬ １．１将抗菌核病基因定位在第四、八和十四３个连锁群上,即：Ｓ     

Deposition and localization of lipid polyester in developing seeds of Brassica napus and Arabidopsis thaliana

Mature seeds of Arabidopsis thaliana and Brassica napus contain complex mixtures of aliphatic monomers derived from non-extractable lipid polyesters. Most of the monomers are deposited in the seed coat, and their compositions suggest the presence of both cutin and suberin layers. The location of these polyesters within the seed coat, and their contributions to permeability of the seed coat and other functional properties are unknown. Polyester deposition was followed over Brassica seed development and distinct temporal patterns of monomer accumulation were observed. Octadecadiene-1,18-dioate, the major leaf cutin monomer, was transiently deposited. In contrast, the saturated dicarboxylates maintained a constant level during seed desiccation, whereas the fatty alcohols and saturated omega-hydroxy fatty acids continually increased. Dissection and analysis of Brassica seed coats showed that suberization is not specific to the chalaza. Analysis of the Arabidopsis ap2-7 mutant suggested that suberin monomers are preferentially associated with the outer integument. Several Arabidopsis knockout mutant lines for genes involved in polyester biosynthesis (att1, fatB and gpat5) were examined for seed monomer load and composition. The variance in polyester monomers of these mutants is correlated with dye penetration assays. Furthermore, stable transgenic plants expressing promoter::YFP fusions showed ATT1 promoter activity in the inner integument, whereas GPAT5 promoter is active in the outer integument. Together, the Arabidopsis data indicated that there is a suberized layer associated with the outer integument and a cutin-like polyester layer associated with the inner seed coat.     

甘蓝型油菜种子硫代葡萄糖苷含量的QTL定位及候选基因鉴定

【目的】为了解析油菜种子硫代葡萄糖苷性状的重要遗传位点及候选基因,【方法】本研究利用KN DH群体在冬性环境2015-2018连续4年的种子硫苷含量表型和KN 高密度SNP遗传连锁图谱,通过Wincart 2.5软件的符合区间作图法对甘蓝型油菜种子硫代葡萄糖苷含量进行QTL定位和潜在候选基因鉴定。【结果】共鉴定到47个硫苷含量QTL,单个QTL解释表型变异最大是qGC.16YL19-4(19.44%),解释表型变异最小的是qGC.15YL12-5(1.82%)。利用元分析的方法将初步鉴定的47个QTL整合为38个consensus QTL,其中7个consensus QTL(cqGC.A9-5、cqGC.A9-7、cqGC.A9-9、cqGC.C2-9、cqGC.C2-10、cqGC.C9-5和cqGC.C9-6)为环境稳定表达QTL,包括3个硫苷含量主效QTL(cqGC.A9-5、cqGC.C2-10和cqGC.C9-5)。在主效QTLcqGC.A9-5和cqGC.C9-5鉴定到3个候选基因BnaA09g05480D,BnaC09g05620D和BnaC09g05810D,其功能主要涉及了油菜硫苷生物合成途径中吲哚-3-乙醛肟(IAOx)的合成和将2-烷基-苹果酸异构化形成3-烷基-苹果酸酯,以及硫苷的转运与分配。【结论】本研究获得了油菜种子硫苷含量3个主效QTL及3个候选基因,该结果为硫苷含量相关基因的功能机械和优质油菜品种培育提供理论依据。     

Conserved noncoding sequences correlate with distant gene contacts in Arabidopsis and Brassica

Physical contact between genes distant on chromosomes is a potentially important way for genes to coordinate their expressions.To investigate the potential importance of distant contacts,we performed high-throughput chromatin conformation capture(Hi-C) experiments on leaf nuclei isolated from Brassica rapa and Brassica oleracea.We then combined our results with published Hi-C data from Arabidopsis thaliana.We found that distant genes come into physical contact and do so preferentially between th...     

抗芜菁花叶病毒转基因甘蓝型油菜的研究

以子叶柄为材料,建立了甘蓝型油菜（ＢｒａｓｓｉｃａｎａｐｕｓＬ．）双低品种的再生体系。通过子叶柄与农杆菌（ＡｇｒｏｂａｃｔｅｒｉｕｍｔｕｍｅｆａｃｉｅｎｓＬＢＡ４４０４）共培养,将表达载体ｐＢＴｕ中芜菁花叶病毒外壳蛋白（ＴｕＭＶ－ＣＰ）基因以整合方式导入甘蓝型油菜,然后用卡那霉素进行筛选,获得了油菜再生植株。经ＰＣＲ特异性扩增、点杂交和Ｓｏｕｔｈｅｒｎ印迹分析,证明再生植株基因组ＤＮＡ中整合了ＴｕＭＶ－ＣＰ基因。攻毒实验表明,有ＴｕＭＶ－ＣＰ基因插入的工程油菜对ＴｕＭＶ均有不同程度的抗性。