Seasonal variation in the biochemical composition of particulate material collected by sediment traps at Signy Island, Antarctica

Particulate material recovered over an 18-month period from sediment traps deployed at a shallow-water nearshore Antarctic site was analysed for photosynthetic pigments, aliphatic hydrocarbons and fatty acids. All components showed a distinct seasonal variation, with high recovery rates during the summer open-water phytoplankton bloom and low rates under winter fast ice. The amount of trapped material differed between the two summers, indicating inter-annual variability of vertical flux associated with differences in the intensity of the summer phytoplankton bloom. Particulate material trapped in summer was dominated by that which originated in diatoms. High recoveries of chlorophyll a, fucoxanthin, n-C_21:6 hydrocarbon, 20:5(n-3) fatty acid and shorter chain (C₁₅–C₂₄) aliphatic hydrocarbons all pointed to a significant summer flux of ungrazed diatoms. There were, however, also signals of zooplankton grazing activity (notably pyrophaeophorbide a), and the presence of C18:4(n-3) and C22:6(n-3) fatty acids suggested a small flux of material from flagellates and other sources. Longer chain n-alkanes (C₂₅–C₃₄) indicative of nanoplankton were detected all year, but there was no significant deposition of zooplankton material in any sample. The major recovery rate of photosynthetic pigments was in late summer (February to April), and the major grazing signal occurred after the peak of the summer diatom bloom. Most of the diatom bloom appeared to settle out from the water column without being grazed. The major seasonal contrast in the biochemistry of the trapped material was the dominance of the diatom signature in summer, and in winter the predominance (but at much lower recovery rates) of material from nanoplankton. Received: 2 March 1998 / Accepted: 12 June 1998     

A comparison of the trophic transfer of fatty acids in freshwater plankton by cladocerans and calanoid copepods

1. Analyses of zooplankton fatty acid (FA) composition in laboratory experiments and samples collected from lakes in New Zealand spanning a wide gradient of productivity were used to assess the extent to which FAs might infer their diet. We used the cladocerans, Daphnia and Ceriodaphnia, and the calanoid copepod, Boeckella, as test organisms, and monocultures of cryptophytes, chlorophytes and cyanobacteria as food. Based on reproductive success, cryptophytes were the highest food quality, chlorophytes were intermediate and cyanobacteria the poorest. 2. Several FA groups were highly correlated between zooplankton and their diets. They were monounsaturated fatty acids (MUFAs), and ω3 and ω6 polyunsaturated fatty acids (PUFAs) for cladocerans, and saturated fatty acids (SAFAs) and ω3 PUFAs for copepods. Several FAs varied significantly less in the zooplankton than in their monoculture diets, e.g. MUFAs in Daphnia, and ω3 and ω6 PUFAs in Ceriodaphnia, despite clear dietary dependency for these FAs. 3. Zooplankton collected from lakes in New Zealand had more eicosapentaenoic acid (EPA) (Daphnia), more highly unsaturated ω3 and ω6 FAs (C₂₀, C₂₂; Daphnia, Ceriodaphnia, Boeckella) and less ω3 C₁₈ PUFAs (Daphnia, Ceriodaphnia, Boeckella) and ω6 C₁₈ PUFAs (Daphnia, Ceriodaphnia) than measured in the same species reared on phytoplankton in the laboratory. 4. Analyses of FA composition of seston and freshwater zooplankton globally showed that, in general, zooplankton had a significantly higher proportion of arachidonic acid and EPA than seston, and copepods also had a higher percentage of docosahexaenoic acid than seston. 5. These results suggest that zooplankton selectively incorporate the most physiologically important FAs. This could be a consequence of preferential assimilation, selective feeding on more nutritious cells or locating and feeding within higher food quality food patches.     

A summer-winter comparison of zooplankton in the oceanic area Around South Georgia

Summary Zooplankton was sampled with RMT (1+8) gear on a synoptic grid of stations centred on South Georgia during the austral summer (November/December 1981) and winter (July/August 1983). This initial paper compares zooplankton biomass, vertical distribution and species composition from RMT 1 catches in the oceanic portion of the grid (water depth greater than 2000 m) during the two surveys. In the winter survey, mean zooplankton biomass within the top 1000 m of the water column was 68% of its summer level. This drop was largely due to a decrease in abundance of krill (Euphausia superba), although biomass of copepods and remaining zooplankton also decreased. Copepods averaged 48% of total biomass in summer and winter, but outnumbered all other taxa put together by a factor of 10. Antarctic epipelagic species predominated around the island in the summer survey but tended to be replaced by sub-Antarctic or cosmopolitan species during the winter survey. The majority of zooplankton also showed a downwards seasonal migration out of the top 250 m layer in winter. However, several epipelagic species, including E. superba, did not migrate, and these tended to have the largest summer-winter differences in overall abundance. These trends were attributed to variation in the position of the Polar Front, which lay north of the island during the summer survey but lay across the survey area in winter, resulting in a greater influence of sub-Antarctic water and the displacement of Antarctic species.     

Biosynthesis of acyclic methyl branched polyunsaturated hydrocarbons inPseudomonas maltophilia

Summary The hydrocarbon composition ofPseudomonas maltophilia was determined by gas chromatography-mass spectrometry. Mono-, di- and tri-unsaturated alkenes were identified with a predominance of polyunsaturated components. The carbon chains of the alkenes contained single methyl branches iniso andanteiso position and double methyl branches in theiso-iso andanteiso-anteiso configurations. The composition of the hydrocarbons from cells grown in synthetic media enriched with amino acids or volatile fatty acids demonstrated that the probable precursors incorporated into individual hydrocarbons were branched and normal fatty acid chains in the range from C₃ to C₁₆. The probable fatty acid precursors which were connected together to form the major triunsaturated hydrocarbon chains were two monounsaturated chains, whereas the major liunsaturated chains resulted from condensation of saturated and monounsaturated chains. The probable precursors for the major monounsaturated hydrocarbons were C₁₄ (C₁₅) and C₁₆ (C₁₅) fatty acids. The accumulation of hydrocarbons was not detected until the cells were in the late exponential phase of growth; the maximal levels were reached at the mid-stationary phase of growth.     

Hydrocarbons Associated with the Developing Microspores in the Anther Loculus of Tulipa

Abstract: Hydrocarbons associated with the developing microspores in the anther loculus of Tulipa cv. Apeldoorn were investigated. They occurred mainly at chain lengths between C₁₉ and C₂₉. At the lower chain lengths the n-alkanes, at higher chain lengths the alkenes dominated. During microspore development the ratio of unsaturated to saturated hydrocarbons in the extracts changed. While the content of all main hydrocarbons increased, the content of the alkanes C₁₉, C₂₁ and C₂₃ increased to 3.8, 3.4 and 3.3 times the initial value compared to 2.1, 2.0 and 2.2 times in case of the alkenes C₂₅, C₂₇ and C₂₉. Surface lipids from petals, leaves and ripe pollen were analyzed in comparison and these analyses confirmed that a high amount of alkenes was unique for microspores. Iso-heptacosane was the main hydrocarbon from ripe pollen, heptacosene was a main component when microspore extracts were analyzed.     

Role of fatty acids in cold adaptation of Antarctic psychrophilic Flavobacterium spp.

Cold-loving microorganisms developed numerous adaptation mechanisms allowing them to survive in extremely cold habitats, such as adaptation of the cell membrane. The focus of this study was on the membrane fatty acids of Antarctic Flavobacterium spp., and their adaptation response to cold-stress. Fatty acids and cold-response of Antarctic flavobacteria was also compared to mesophilic and thermophilic members of the genus Flavobacterium. The results showed that the psychrophiles produced more types of major fatty acids than meso- and thermophilic members of this genus, namely C_15:1 iso G, C_15:0 iso, C_15:0 anteiso, C_15:1 ω6c, C_15:0 iso 3OH, C_17:1 ω6c, C_16:0 iso 3OH and C_17:0 iso 3OH, summed features 3 (C_16:1 ω7cand/or C_16:1 ω6c) and 9 (C_16:0 10-methyl and/or C_17:1 iso ω9c). It was shown that the cell membrane of psychrophiles was composed mainly of branched and unsaturated fatty acids. The results also implied that Antarctic flavobacteria mainly used two mechanisms of membrane fluidity alteration in their cold-adaptive response. The first mechanism was based on unsaturation of fatty acids, and the second mechanism on de novo synthesis of branched fatty acids. The alteration of the cell membrane was shown to be similar for all thermotypes of members of the genus Flavobacterium.     

The vicissitudes of microorganism and vegetation recorded by lipid biomarkers in the Antarctic penguin habitat and their implications for climate change

Lipid biomarkers of microorganism and vegetation preserved in penguin droppings record historical changes in the West Antarctic climate and environment. n-Alkanes, fatty acids and coprostanols have been determined in sediment core AD6 from penguin droppings in Ardley Island, West Antarctica, using GC or GC/MS/SIM. For n-alkanes, the main carbon number was nC₂₃ with single-peak pattern, ΣC₂₁⁻/ΣC₂₂⁺ value was from 0.27 to 0.61, the carbon preference index (CPI) was from 2.97 to 6.12 with significant odd–even predominance (OEP), and these indicate that the vegetation was dominated by mosses and lichens. For fatty acids, the main carbon numbers were nC_16:0 and nC_24:0 with double-peak pattern, ΣC₂₁⁻/ΣC₂₂⁺ value was from 0.35 to 0.77, and the relative abundance ratio of even:odd carbon (CPI_A) was from 2.88 to 6.40 with significant OEP. Bacteria invasion index ((iC_15:0 + aC_15:0)/nC_15:0 for fatty acids) showed high contribution of bacteria during 1977–1982, 1948–1953 and 1920–1925, indicating enhanced microbial activities. Meanwhile, CPI_A values decreased and extreme microbes contributed fatty acids with low carbon number to penguin dropping strata. Furthermore, the concentration of cholestanol and ratio of cholestanol/cholesterol in penguin dropping strata changed correspondingly, indicating that the microbial degradation played a major role in the increasing ratio of cholestanol/cholesterol during the sedimentation process. The down-core profiles of n-alkanes, fatty acids and coprostanols in penguin dropping strata indicate that extreme microorganism and bacteria play important roles in the relatively simple Antarctic ecological system associated with climate conditions.     

Ontogenetic diet shift of age‐0 year Pacific bluefin tuna Thunnus orientalis

Stomach contents of 437 age‐0 year Pacific bluefin tuna Thunnus orientalis (20·3–59·4 cm fork length, L_F) caught in the Tsushima Current and the Kuroshio regions around Japan were examined to investigate their ontogenetic diet shift. Prey compositions were diverse and different between regions. Although the seasonal growth patterns were different between regions, ontogenetic diet shifts shared a common pattern. In the Tsushima Current region (Sea of Japan), small T. orientalis (20–25 cm L_F) preyed upon small squid (juvenile Enoploteuthis chunii), and larger ones (25–35 cm L_F) gradually shifted their diet to mesopelagic fish (Maurolicus japonicus). In the Kuroshio region (Pacific Ocean), small T. orientalis (20–25 cm L_F) preyed upon small zooplankton (mostly crustacean larvae), and larger ones (25–40 cm L_F) shifted to epipelagic fishes (Etrumeus teres, Sardinops melanostictus and Engraulis japonicus). The observed data suggest that T. orientalis switch to a diet more based on fish prey items, which have more body mass and greater swimming ability than small squid and zooplankton, after they reach a L_F of 25 cm.     

Phylogeny,morphology, and physiology of Micractinium strains isolated from shallow ephemeral freshwater in Antarctica

Cryotolerant eukaryotic microalgae were isolated from meltwater streams on Ardley Island and King George Island in Antarctica, and their morphological, molecular, and physiological characteristics were investigated. Owing to their simple morphology, distinctive characters were not observed with neither light microscopy nor transmission electron microscopy. However, molecular phylogenetic inferences drawn from the concatenated small subunit rRNA and internal transcribed spacer sequence data indicated that these microalgal strains belonged to the genus Micractinium. All the Micractinium strains showed cryotolerant properties, while their optimum growth temperature was around 20°C. Similar to other cryotolerant organisms, these Antarctic microalgae also contained a higher ratio of polyunsaturated fatty acids to saturated fatty acids. In this study, new Antarctic Micractinium spp. were discovered and added to the culture collection. These cryotolerant strains may serve as a promising source of nutritionally important linoleic (C_18:2 ω6) and α‐linolenic (C_18:3 ω3) acids.     

Stable Isotope and Signature Fatty Acid Analyses Suggest Reef Manta Rays Feed on Demersal Zooplankton

Assessing the trophic role and interaction of an animal is key to understanding its general ecology and dynamics. Conventional techniques used to elucidate diet, such as stomach content analysis, are not suitable for large threatened marine species. Non-lethal sampling combined with biochemical methods provides a practical alternative for investigating the feeding ecology of these species. Stable isotope and signature fatty acid analyses of muscle tissue were used for the first time to examine assimilated diet of the reef manta ray Manta alfredi, and were compared with different zooplankton functional groups (i.e. near-surface zooplankton collected during manta ray feeding events and non-feeding periods, epipelagic zooplankton, demersal zooplankton and several different zooplankton taxa). Stable isotope δ¹⁵N values confirmed that the reef manta ray is a secondary consumer. This species had relatively high levels of docosahexaenoic acid (DHA) indicating a flagellate-based food source in the diet, which likely reflects feeding on DHA-rich near-surface and epipelagic zooplankton. However, high levels of ω6 polyunsaturated fatty acids and slightly enriched δ¹³C values in reef manta ray tissue suggest that they do not feed solely on pelagic zooplankton, but rather obtain part of their diet from another origin. The closest match was with demersal zooplankton, suggesting it is an important component of the reef manta ray diet. The ability to feed on demersal zooplankton is likely linked to the horizontal and vertical movement patterns of this giant planktivore. These new insights into the habitat use and feeding ecology of the reef manta ray will assist in the effective evaluation of its conservation needs.     

Degradation of long-chain n-alkanes by the yeast Candida maltosa

Summary The yeast Candida maltosa precultivated on liquid n-alkanes utilized different solid n-alkanes (especially C₂₀–C₂₅) in the presence of pristane as an organic phase with rates comparable to, or somewhat larger than, those of liquid n-alkanes. Analysis of cellular fatty acids indicated an assimilation of solid n-alkanes via monoterminal oxidation. The resulting fatty acids with substrate chain length were chain-shortened by C₂ units down to an optimal range of chain length from C₁₆ to C₁₈ and incorporated into cellular, lipids directly or after desaturation. The intermediates of chain-shortening with numbers of carbon atoms higher than C₁₈, as well as the unusually long-chain fatty acids of substrate chain length, were detected in trace amounts only. Even-carbon-numbered and odd-numbered fatty acids predominated in experiments with evenchain and odd-chain n-alkanes, respectively. Studies with cerulenin indicated that de novo synthesis of fatty acids was negligible. Oxidation of solid n-alkanes by the yeast C. maltosa yielded fatty acid patterns similar to those of cells grown on liquid n-alkanes.     

OCCURRENCE OF AN ISOPRENOID C25 DIUNASATURATED ALKENE AND HIGH NEUTRAL LIPID CONTENT IN ANTRACTIC SEA-ICE DIATOM COMMUNITIES1

The lipid and hydrocarbon composition of natural populations of diatom communities collected during the austral spring bloom of 1985 in the sea-ice at McMurdo Sound, Antartica was analyzed by TLC-FID, GC and GC-MS. Sea-ice diatom communities were dominated by Amphiprora sp., Nitzschia stellata Manguin and Berkeleya sp. at Cape Armitage; N. stellata, Amphiprora, Pleurosigma, N. kerguelensis (O'Meara) Hasle and some small centric diatoms adjacent to the Erebus Ice Tongue; and Porosira pseudodenticulata (Hustedt) Jouse at Wohlschlag Bay. Lipid distributions of the sea ice diatom communities from the Cape Armitage and Ereus sites were characterized by high concentrations of tracylaglecycerol (triacylglycerolplar lipid = 1.0 to 1.5). The hydrocarbon n-C_21:6, common in temperate diatoms, and an isoprenoid C₂₅ diunsaturated alkene were the dominant hydrocarons detected at these two sites. Hydrogenation of the C₂₅ diene produced the known alkane 2, 6, 10, 14-tetramethyl-7- (3-methylpentyl)-pentadecane. The C₂₅ diene is one of several structurally related hydrocarbons reported in many estuarine, coastal and ocean ic sediments. We propose that certain species of diatoms are a likely source of these alkenes in sediments. The first reported biological occurrence of the C₂₅ diene in the green seaweed Enteromorpha prolifera may have been due to the presence of epiphytic microalgae in the field sample analysed.     

Arabidopsis ketoacyl‐CoA synthase 16 (KCS16) forms C36/C38 acyl precursors for leaf trichome and pavement surface wax

The aliphatic waxes sealing plant surfaces against environmental stress are generated by fatty acid elongase complexes, each containing a β‐ketoacyl‐CoA synthase (KCS) enzyme that catalyses a crucial condensation forming a new C─C bond to extend the carbon backbone. The relatively high abundance of C₃₅ and C₃₇ alkanes derived from C₃₆ and C₃₈ acyl‐CoAs in Arabidopsis leaf trichomes (relative to other epidermis cells) suggests differences in the elongation machineries of different epidermis cell types, possibly involving KCS16, a condensing enzyme expressed preferentially in trichomes. Here, KCS16 was found expressed primarily in Arabidopsis rosette leaves, flowers and siliques, and the corresponding protein was localized to the endoplasmic reticulum. The cuticular waxes on young leaves and isolated leaf trichomes of ksc16 loss‐of‐function mutants were depleted of C₃₅ and C₃₇ alkanes and alkenes, whereas expression of Arabidopsis KCS16 in yeast and ectopic overexpression in Arabidopsis resulted in accumulation of C₃₆ and C₃₈ fatty acid products. Taken together, our results show that KCS16 is the sole enzyme catalysing the elongation of C₃₄ to C₃₈ acyl‐CoAs in Arabidopsis leaf trichomes and that it contributes to the formation of extra‐long compounds in adjacent pavement cells.     

Increased content of very-long-chain fatty acids in the lipids of halophyte vegetative organs

Qualitative and quantitative compositions of esterified fatty acids (FAs) in the total lipids from the leaves, shoots, and roots of halophile plants, such as suaeda (Suaeda altissima), samphire (Salicornia europaea), and wormwood (Artemisia lerchiana), collected in their natural environments were estimated by GLC techniques. It was shown that the vegetative organs of these halophytes contained 24 FA species, and 16 of them were tentatively identified as the very-long-chain FAs (VLCFAs). There were four VLCFA groups, viz. C₂₀, C₂₁, C₂₂, and C₂₃, each including saturated, mono-, and diunsaturated components; C₂₄ and C₂₅ FAs were also present. The concentration of VLCFAs in the total FAs comprised 4–64%. In vegetative organs of higher plants not subjected to genetic transformation, such a high VLCFA content was found for the first time. Saturated and even-numbered components predominated among the VLCFAs, and the roots exceeded severalfold the above-ground organs in the total VLCFA content. Possible pathways of VLCFA biosynthesis in plants, VLCFA content in the vegetative tissues, and the physiological role of membrane lipid FA composition in the plant salt metabolism are discussed.     

Phenotypic and molecular identification of Cellulosimicrobium cellulans isolated from Antarctic snow

We report for the first time the isolation of Cellulosimicrobium cellulans from Antarctic snow. This strain demonstrated physiological traits that were markedly different from that of the mesophilic C. cellulans type strain DSM 43879^T. The dominant cell wall sugars in C. cellulans were glucose, galactose and mannitol whereas rhamnose was the only major sugar in the type strain. Cellular fatty acid patterns were dominated by 12-methyltetradecanoic acid (ai-C_15:0), hexadecanoic acid (C_16:0) and 14-methylhexadecanoic acid (ai-C_17:0) but lacked iso fatty acids unlike the type strain. The ability of C. cellulans to survive in Antarctic snow could be due to these modified physiological properties that distinguish it from its mesophilic counterpart. Carbon utilization studies demonstrated that C. cellulans preferred complex carbon substrates over simple ones suggesting that it could play a potential role in carbon uptake in snow. Our study shows that this genus could be more cosmopolitan than hitherto thought of and is capable of living in extreme cold environments.     

Predation,cover, and convergent evolution in epipelagic oceans

The factor of most importance to the structure of epipelagic oceanic communities is the absence of cover and the inability to hide from predators in surface waters during the day (Elton, 1939). Visual predation in an environment devoid of cover has resulted in convergent evolution into only six modal adaptive patterns. Large, fast, visual predators roam the water, 1) alone or in 2) schools, and they eat anything of appropriate size that they see. Prey escape only by dint of 3) very small size, 4) invisibility due to tissue transparency, 5) diurnal vertical migration, or by 6) exploitation of the sea surface. The sensory ecology and physiology of zooplankton are different from that of all other animal categories in all other habitats. Epipelagic zooplankton are either extremely small animals, with small and structurally simple sense organs, or they are large, with gelatinous, transparent bodies which often lack sense organs.     

Coupling of canopy and understory food webs by ground‐dwelling predators

Understanding food‐web dynamics requires knowing whether species assemblages are compartmentalized into distinct energy channels, and, if so, how these channels are structured in space. We used isotopic analyses to reconstruct the food web of a Kenyan wooded grassland. Insect prey were relatively specialized consumers of either C₃ (trees and shrubs) or C₄ (grasses) plants. Arboreal predators (arthropods and geckos) were also specialized, deriving c. 90% of their diet from C₃‐feeding prey. In contrast, ground‐dwelling predators preyed considerably upon both C₃‐ and C₄‐feeding prey. This asymmetry suggests a gravity‐driven subsidy of the terrestrial predator community, whereby tree‐dwelling prey fall and are consumed by ground‐dwelling predators. Thus, predators in general couple the C₃ and C₄ components of this food web, but ground‐dwelling predators perform this ecosystem function more effectively than tree‐dwelling ones. Although prey subsidies in vertically structured terrestrial habitats have received little attention, they are likely to be common and important to food‐web organization.     

Hydrocarbons and fatty acids of Lycopodium

The analysis of fatty acids and hydrocarbons in the sporophytes of three Lycopodium species has revealed a characteristic distribution of C₁₆ and C₁₈ acids. The hydrocarbon fraction of the lipids contain a homologous series of monounsaturated alkenes in the C₁₇C₃₀ range with an even to odd preference. Maxima at both C₁₇ and C₂₇ among the n-alkanes reveals similarities both to the distribution of hydrocarbons in other plant groups. The production of spores and their inclusion with one sporophyte does not alter the fatty acid pattern but does decrease the alkene concentration and modifies the alkane distribution, shifting both maxima. The presence of pristane and phytane in all specimens, the dual maxima of alkanes and slight odd to even preference of alkanes is noteworthy in that these characteristics are possessed by geological deposits derived from Lycopodium ancestors.     

Extractive compounds of birch buds (<Emphasis Type="Italic">Betula pendula</Emphasis> Roth.): II. Carbonyl compounds and oxides. Esters

This is the first report devoted to study of the hydrocarbon composition of the extract of buds of European birch Betula pendula (family Betulacea). We have identified saturated (C₁₆ to C₂₈, even number of carbon atoms) and unsaturated (linoleic and linolenic) fatty acids, β-caryophyllene, α-humulene, and the components of epicuticular waxes of cover scales, such as n-alkanes (C₂₁ to C₂₆), esters of fatty acids (C₁₆ to C₂₈, even number of carbon atoms), and fatty alcohols (C₁₈ to C₃₀, even number of carbon atoms). The gas chromatographic retention indices of all identified compounds have been determined.