Comparison of the cytochrome bc1 complex with the anticipated structure of the cytochrome b6f complex: Le plus ça change le plus c'est la même chose

Structural alignment of the integral cytochrome b6-SU IV subunits with the solved structure of the mitochondrial bc1 complex shows a pronounced asymmetry. There is a much higher homology on the p-side of the membrane, suggesting a similarity in the mechanisms of intramembrane and interfacial electron and proton transfer on the p-side, but not necessarily on the n-side. Structural differences between the bc1 and b6f complexes appear to be larger the farther the domain or subunit is removed from the membrane core, with extreme differences between cytochromes c1 and f. A special role for the dimer may involve electron sharing between the two hemes b(p), which is indicated as a probable event by calculations of relative rate constants for intramonomer heme b(p) --> heme b(n), or intermonomer heme b(p) --> heme b(p) electron transfer. The long-standing observation of flash-induced oxidation of only approximately 0.5 of the chemical content of cyt f may be partly a consequence of the statistical population of ISP bound to cytfon the dimer. It is proposed that the p-side domain of cyt f is positioned with its long axis parallel to the membrane surface in order to: (i) allow its large and small domains to carry out the functions of cyt c1 and suVIII, respectively, of the bc1 complex, and (ii) provide maximum dielectric continuity with the membrane. (iii) This position would also allow the internal water chain ("proton wire") of cyt f to serve as the p-side exit port for an intramembrane H+ transfer chain that would deprotonate the semiquinol located in the myxothiazol/MOA-stilbene pocket near heme b(p). A hypothesis is presented for the identity of the amino acid residues in this chain.     

Savants rêveurs et rêveurs savants: Freud lecteur de la science française des rêves

This paper sets out to place The Interpretation of Dreams within an historical context. It argues that it is impossible to have complete confidence in Freud’s words when, in his letters to Wilhelm Fliess, he characterized himself as a mere discoverer. In reality, Freud also felt he belonged to a learned community of dream specialists, whom I call “dreaming scientists” and “scientific dreamers”. Here, I offer, as example, a portrait of Freud as a reader of two French authors, Alfred Maury, and, indirectly, Léon Hervey de Saint-Denys. I analyze how Freud positioned himself as Maury’s successor and sometimes experienced dreams like Hervey de Saint-Denys. The premise of this work is that we must set aside Freud if we want to venture into the learned dream culture peculiar to the 19th century. Only afterwards can we return to Freud and place him in this context as a creative heir.     

Chuaria,Tawuia, Longfengshania. Trois classes de fossiles précambriens pour un même taxon

Chuaria, Tawuia, Longfengshania. Three classes of Precambrian fossils for the same taxon. Chuaria, Tawuia and Longfengshania are three Precambrian fossils preserved as carbonaceous compressions. They were found together in the Tuanshanzi Formation, China, circa 1700 Ma. Kumar discovered that Tawuia was used in Rampura, India, as a peduncle linking Chuaria to an adhesive base. He interpreted this combination as a seaweed bearing a ball of spores. The present paper supports the hypothesis that Chuaria, Tawuia and Longfengshania refer to three stages in the development of the same individual that was not a seaweed but a distant relative of the common ancestor of Metazoa and Fungi, a forerunner of the current Dictyostelids. To cite this article : B. Teyssèdre, C. R. Palevol 2 (2003).     

Étude des échanges de nourriture entre butineuses deFormica polyctena travaillant dans des secteurs différents mais appartenant a la même fourmilière

Résumé Un marquage à l'or radio-actif de butineuses deFormica polyctena a été effectué le long d'une piste de butinage. Nous avons constaté que les échanges de nourriture étaient très faibles entre ouvrières travaillant sur des pistes différentes.

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Summary Labelling foraging ants (Formica polyctena) with radioactive gold on a foraging path, the authors observe that the exchange of food are very weak between foragers from differents paths.

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Ce travail est dédié au Pr. KonradLorenz, pour son soixantième anniversaire.     

Eria mêdogensis,a Probably Peloric Form of Eria Coronaria,with a Discussion on Peloria in Orchidaceae

Eria mêdogensis S. C. Chen et Tsi was recently found in southeastern Tibet, several specimens of which have been collected by various botanists since 1980. This is a “normal” entity with its habit very similar to that of Eria coronaria, from which it differs by having a regular perianth and longer bracts. We think it probable that this new entity is a peloric form of Eria coronaria. Peloria (or pelory) is a type of floral abnormality, which is found in many zygomorphicflowered taxa. It was first detected by Linnaeus (1744) in Linaria vulgaris, and then by others in Labiatae, Orchidaceae, etc. However, it is still an open question how to explain it theoretically and how to treat it taxonomically. In Orchidaceae, so far as our knowledge is concerned, peloria has been encountered in no less than 21 genera. In most cases, peloric flowers are found sporadically on an occassional plant, as seen in Cypripedium reginae and Eria oblitterata. Sometimes, however, peloric form may occur coexisting with normal-flowered form in one and the same species, as seen in Dendrobium tetrodon and Epipogium roseum. They are both abnormally peloric forms. It would not result in naming or renaming a plant taxonomically, whether the appearance of abnormally regular flowers on a normal-flowered inflorescence, or of abnormal-flowered individuals in normal-flowered species. In Phragmipedium lindenii, however, the case is different. It is quite “normal” and even of wider distribution than its nonpeloric allies P. wallisii and P. caudatum, from which it has once been considered to be derived. This is a normally peloric form. Whether it is a reversal or not, the appearance of a “normally” peloric taxon may be taken for a leap in the process of evolution. Taxonomically, we had better treat it as a separate species, especially when its origin is uncertain. For example, the entity just mentioned had been treated as a peloric va riety of Phragmipedium caudatum (var. lindenii) until 1975, when Dressler & Williams recognized it as an independent species based on the fact that its nonpeloric flowers occassionally found in a peloric population in Jungurahua of Ecuador are dissimilar in lip to those in P. caudatum. Garay (1979) considered it to be a peloric form of P. wallisii but maintained it at the specific level. This is indeed a good example of taxonomic treatment of normally peloric form. On the other hand, however, most of the regular-flowered entities in Orchidaceae are not peloric but rather primitive forms, such as Neuwiedia, Apostasia and Thelymitra, of which no less than 50 species have been reported since the eighteen century. They have never been regarded as peloric forms. Unfortunately, this has been neglected by some botanists. For instance, a hypothetically primitive orchid flower designed by Pijl & Dodson (1966) has a distinctly specialized lip with a short spur. In fact, in addition to the aforementioned genera we have some more examples of normally regular-flowered orchids. Among them Archineottia is the most interesting. This is a genus of four species, two of which are regular-flowered. Of special interest is that in this genus and its ally, Neottia, one can find all steps of column evolution from a simple form with stamen and style not fully united to a most complicated form in which they have well fused. Archineottia has a very primitive column, on which neither rostellum nor clinandrium is found but a terminal and undifferentiated stigma (Fig.2: 2, 4, 6, 8). In addition, there exists on the back of the column a thick ridge with its upper end joining the filament with which it is of same texture. It is obviously the lower part of the filament which has been adnate to the style (column). In Neottia, however, the column is much more advanced and very typical among the family. It has a very large rostellum and most complicated stigma structure (Fig. 10, 12, 14, 16, 18). One of the most interesting examples is Neottia acuminata, in which the stigma even becomes lamellate and almost backwards clasps the erect rostellum, but the perianth is more or less regular with its lip entire and somewhat similar to, but shorter and wider than, the petals. In these two genera there are altogether three species, namely Archineottia gaudissartii, A microglottis and Neottia acuminata, possessing regular or nearly regular perianth (Fig. 2: 1, 3, 17). They are obviously not peloric forms. We can not imagine, indeed, that a complicated form like Neottia acuminata or its allies would degenerate step by step into a simple form, and finally into a peloric form. Archineottia belongs to the subtribe Listerinae, which is closely related to Limodorinae, a rather primitivs subtribe with some genera possessing single pollen grain, relatively few and long chromosomes and monocotyledonous habit. Apparently, there is nothing surprising in the occurrence of some normally regular-flowered taxa, such as Archineottia, Diplandrorchis, Tangtsinia and Sinorchis, in these two primitive subtribes. Another instance is Aceratorchis, a genus formerly included in Orchis, from which it is distinguished by the entire lip which is more or less similar to the petals. Strictly speaking, however, its flowers are not truly regular. Two species have been described in this genus, but they were recently considered as conspecific. Aceratorchis tschiliensis is widely distributed from Hebei through Qinghai and Sichuan to northwestern Yunnan. It is cross-pollinated and produces seeds efficiently. All these indicate its normally primitive taxon, instead of peloria. It may be noted here that Asia is rich in members of Orchidioideae, as well as its primitive representatives. The occurrence of a normally regular-flowered form in Asia, whether representing primitive form of Orchis or Orchidioideae, is imaginable. In Orchidaceae, as mentioned above, regular flowers are not only found in some primitive taxa and peloric forms, but also in a few advanced groups. For example, a close investigation by the senior author (Chen 1979) on Satyrium ciliatum revealed that this species has hermaphrodite, staminate and pistallate forms, for which no less than nine names have been published. The flowers of its pistallate form are almost regular, in which nothing is found but three similar petals and an elongate style with three stigmatic lobes at its top (Fig. 2: 19). It is interesting to note that floral reversions in Orchidaceae are not always in connection with peloria. For example, Epidendrum triandrum of North America represents another kind of reversion. It is a reversal to abnormal polymery of stamens and not to abnormal regularity of perianth. Like Phragmipedium lindenii, it is also hereditary. We may give it a new name “Polyandrism” or something else, but, in fact, there is no essential distinction of this kind of reversion from peloria. It deserves mentioning that most of the regular-flowered entities, including primitive, advanced and peloric ones, occur in Asia and Australasia, where the Orchidaceae may have originated as pointed out by some botanists. We have good reason to verify the primitiveness and normality of many regular-flowered entities, but there exists no sufficient evidence for the impossible existances of normally regular-flowered species in those like Dendrobium, Eria, Lecanorchis, etc. For instance, Lecanorchis javanica, Dendrobium atavus and the new species described here are considered to be peloric forms, but it is only a conjecture, for no reason can be given for it. It is not impossible that some so-called peloric forms may prove to be truly primitive ones in the future. Of course, a closer investigation is needed. Summarizing the above, we may come to the following conclusions: 1. Regular or nearly regular perianth is a normal characteristic of orchids. It is chiefly found in some primitive taxa and sometimes also in certain peloric forms and advanced groups. Regular-flowered entities may not necessarily be peloric forms. 2. There exist two different types of peloria in Orchidaceae. One is abnormal form, with its peloric flowers appearing at random. The other is “normal” form, with its individuals all possessing peloric flowers. The latter is inheritable and can produce seeds efficiently, It would be best to treat it as an independent species taxonomically, especially when its origin is uncertain. 3. Although peloria has been considered to he a reversal as a whole, conditions vary from plant to plant. Some peloric forms have petal-like lip, and others have labellum-like petals. Sometimes the same plant produces different kinds of peloric flowers in different years, sometimes peloric flowers do not reappear upon the same plant. A few species can produce both peloric and normal individuals, but others produce peloric forms only. Peloria is in fact a term only used to cover the phase in which lip becomes similar to the petals. It is never all-embracing. We recognize the existance of peloria in Orchidaceae, but great care must be taken to distinguish truly peloric form from normally primitive one. It must be admitted that what causes peloria and even what is peloria are still problems awaiting solution. Acknowledgments: Our heartfelt thanks are due to Dr. Leslie A. Garay, Curator of the Orchid Herbarium of Oakes Ames, Botanical Museum of Harvard University, for his valuable suggestions during the preparation of this paper. We are also indebted to the artists, Mrs. Chunrung Liu and Mr. Chao-zhen Ji of our department, for their preparing the fine drawings.     

La douleur, la souffrance et le corps: enjeux pour la médecine

Pain is an unpleasant sensory, emotional and subjective experience that does not necessarily correlate directly with tissue damage. It allows us to avoid stimuli that cause bodily harm, yet its meaning extends beyond the ability to detect such stimuli: the definition of pain has epistemological and ethical significance. We always risk reducing pain to mere nociception by neglecting the multifactorial experience of consciousness or, on the other hand, overemphasizing, by neglecting the physical dimension, the suffering experienced. This problem creates a major barrier to understanding pain and has important consequences in medical practice, which we analyze in several areas: the relevance of the clinic in modern medicine, pathology (through the issues raised by fibromyalgia), neuroscience and brain imaging, and treatment (through a look at the placebo effect).     

Misconceptions in biology: a meta-synthesis study of research, 2000–2014

Abstract

Teachers need to be aware of biology misconceptions in their classrooms and how to address them. In response, researchers and science educators have suggested and examined effective practices to prevent and ameliorate misconceptions. An extensive review of the literature gives researchers and educators insights into trends, practices, and gaps in the misconceptions research and helps decide which issues to address and why. The current study shares how researchers in Turkey conduct a content analysis of published misconception research in Turkey by using a form. The analysis resulted in a meta-synthesis (thematic content analysis) that inventoried and compared the purposes, research methods, data collection instruments, and findings of the selected publications. Biology educators in other regions of the world can inform their practice by using this instrument and research methods to learn about trends and patterns in misconception research. Researchers will gain insights into effective methods that have been used to examine misconceptions and will be able to identify biology misconceptions that have been under-investigated and need further analysis.     

La fluorocholine(18F) a une utilité clinique dans le cancer de la prostate et le carcinome hépatocellulaire… parfois chez le même malade

Case reportIn order to stage hepatocellular carcinoma (HCC), a patient was referred to PET/CT using fluorodeoxyglucose(18F) (FDG) and, if necessary, fluorocholine(18F) (FCH). HCC was proven by biopsy of a hepatic mass discovered on CT performed for a biological recurrence of prostate cancer.ResultFDG PET/CT did not show any anomaly. FCH PET/CT was thus performed and showed various foci: the hepatic mass, a large abdominal adenopathy and an unexpected subcentimetre lung nodule. The diagnostic uncertainty mostly concerned this lung nodule which was biopsied and consisted of a metastasis of the prostate cancer. Due to the presence of two metastatic cancers, the patient's management was altered, with chemotherapy for the HCC and hormone therapy for the prostate cancer.ConclusionSeveral types of cancer take-up fluorocholine(18F), which is a powerful tool to detect metastases, in particular in case of rising levels of marker with a negative FDG PET/CT. Even when FDG PET/CT is positive, FCH may reveal unexpected foci with other metabolic characteristics, although it is not specific of a given primary cancer, as well as FDG. For staging of HCC, we thus recommend to perform PET/CT with both tracers.     

Nationalism,nation and territory: Jacint Verdaguer and the Catalan Renaixença

This paper seeks to explain the historic importance to Catalan nationalism of the nineteenth-century poet and priest, Jacint Verdaguer. In order to do so, rather than focus on his contribution – and that of the wider cultural revival, the Renaixença – to the development of the Catalan language as the basis for national political mobilization, this paper argues that we cannot fully understand Verdaguer's importance without reference to his role in constructing a geographical narrative linking nation and territory. At the same time, given that national meanings are always contested, the paper proposes a dialectical approach to nationalism that situates the work of writers within the context of power struggles between social groups. Consequently, Veradguer's centrality to Catalan nationalism is ultimately explained by his role in producing a geographical narrative capable of attracting important sectors of rural Catalonia to the hegemonic project of the industrial bourgeoisie.     

Comparison of the Cytochrome bc 1 Complex with theAnticipated Structure of the Cytochrome b 6 f Complex:De Plus Ça Change de Plus C'est la Même Chose

Structural alignment of the integral cytochrome b ₆-SU IV subunits with the solved structure of themitochondrial bc ₁ complex shows a pronounced asymmetry. There is a much higher homology onthe p-side of the membrane, suggesting a similarity in the mechanisms of intramembrane andinterfacial electron and proton transfer on the p-side, but not necessarily on the n-side. Structuraldifferences between the bc ₁ and b ₆ f complexes appear to be larger the farther the domain or subunitis removed from the membrane core, with extreme differences between cytochromes c ₁ and f. Aspecial role for the dimer may involve electron sharing between the two hemes b _p, which is indicatedas a probable event by calculations of relative rate constants for intramonomer heme b _p hemeb _n, or intermonomer heme b _p heme b _p electron transfer. The long-standing observation offlash-induced oxidation of only 0.5 of the chemical content of cyt f may be partly a consequence ofthe statistical population of ISP bound to cyt f on the dimer. It is proposed that the p-side domainof cyt f is positioned with its long axis parallel to the membrane surface in order to: (i) allow itslarge and small domains to carry out the functions of cyt c ₁ and suVIII, respectively, of the bc ₁complex, and (ii) provide maximum dielectric continuity with the membrane. (iii) This positionwould also allow the internal water chain (proton wire) of cyt f to serve as the p-side exit portfor an intramembrane H⁺ transfer chain that would deprotonate the semiquinol located in themyxothiazol/MOA-stilbene pocket near heme b _p. A hypothesis is presented for the identity of theamino acid residues in this chain.