Healing of Broken Linear Dicentric Chromosomes in Yeast

In yeast, meiotic recombination between a linear chromosome III and a haploid-viable circular chromosome will yield a dicentric, tandemly duplicated chromosome. Spores containing apparently intact dicentric chromosomes were recovered from tetrads with three viable spores. The spore containing the dicentric inherited URA3 (part of the recombinant DNA used to join regions near the ends of the chromosome into a circle) as well as HML, HMR and MAL2 (located near the two ends of a linear but deleted from the circle). The Ura⁺ Mal⁺ colonies were highly variegated, giving rise to as many as seven distinctly different stable ("healed") derivatives, some of which were Ura⁺ Mal ⁺, others Ura⁺ Mal^- and others Ura ^- Mal⁺. The colonies were also sectored for five markers (HIS4, LEU2, CRY1, MAT and THR4) initially heterozygous in the tandemly duplicated dicentric chromosome.—Southern blot and genetic analyses have demonstrated that these stable derivatives arose from mitotic break-age of the dicentric chromosome, followed by one of several different healing events. The majority of the stable derivatives contained circular or linear chromosomes apparently resulting from homologous recombination between a broken chromosome end and a homologous region on the other end of the original dicentric duplicated chromosome. A smaller proportion of events resulted in apparently uniquely healed linear chromosomes in which the broken chromosome acquired a new telomere. In two instances we recovered chromosome III partially duplicated with a novel right end. We have also found one derivative that had also experienced rearrangement of repeated DNA sequences found adjacent to yeast telomeres.     

Nonrandom X Chromosome Inactivation Is Influenced by Multiple Regions on the Murine X Chromosome

During the development of female mammals, one of the two X chromosomes is inactivated, serving as a dosage-compensation mechanism to equalize the expression of X-linked genes in females and males. While the choice of which X chromosome to inactivate is normally random, X chromosome inactivation can be skewed in F1 hybrid mice, as determined by alleles at the X chromosome controlling element (Xce), a locus defined genetically by Cattanach over 40 years ago. Four Xce alleles have been defined in inbred mice in order of the tendency of the X chromosome to remain active: Xce^a < Xce^b < Xce^c < Xce^d. While the identity of the Xce locus remains unknown, previous efforts to map sequences responsible for the Xce effect in hybrid mice have localized the Xce to candidate regions that overlap the X chromosome inactivation center (Xic), which includes the Xist and Tsix genes. Here, we have intercrossed 129S1/SvImJ, which carries the Xce^a allele, and Mus musculus castaneus EiJ, which carries the Xce^c allele, to generate recombinant lines with single or double recombinant breakpoints near or within the Xce candidate region. In female progeny of 129S1/SvImJ females mated to recombinant males, we have measured the X chromosome inactivation ratio using allele-specific expression assays of genes on the X chromosome. We have identified regions, both proximal and distal to Xist/Tsix, that contribute to the choice of which X chromosome to inactivate, indicating that multiple elements on the X chromosome contribute to the Xce.     

Characterization of a Recombinant Mouse t Haplotype That Expresses a Dominant Lethal Maternal Effect

The t^wLub2 chromosome was generated by rare recombination between a complete t haplotype and a wild-type form of mouse chromosome 17. This recombinant chromosome expresses a dominant lethal effect in all embryos that inherit the mutant chromosome from their mothers. The phenotype of this maternal effect is indistinguishable from that expressed by the previously described T^hp deletion chromosome. It appears likely that the crossing over event that gave rise to t^wLub2 was unequal and resulted in the alteration or deletion of a gene (which is named the T-associated maternal effect locus, Tme) that must be inherited from the mother in order for normal development to proceed through late stages of gestation. The results presented here allow a mapping of the Tme locus between the quaking and tufted loci which are 3 cM apart within the proximal region of chromosome 17.     

Extrachromosomal Element Delta in DROSOPHILA MELANOGASTER. VIII. Inseparable Association with Sensitive Second Chromosome

The presence of delta is always accompanied by a sensitive second chromosome in Drosophila melanogaster or vice versa. The separability of delta and the chromosome line was investigated in experiments designed to eliminate delta or to suppress its multiplication for a number of generations. Cy/S^b-5 males which transmit a minute amount of delta b (retained by chromosome S^b, kills S^b/S^b and S^b/S^r zygotes) to their progeny were backcrossed for 61 generations to Cy/Pm females which carried no delta. After backcrossing 465 Cy/S^b-5 males were individually examined for retention of delta, and all were found to retain delta b in its latent state. A homozygous strain for the S^r-20B chromosome which retained a minute amount of delta r (retained by chromosome S^r, kills S^r/S^r zygotes) was obtained. 1,252 Cy/S^r-20B females derived from the homozygous strains at the 21st generation were tested individually for delta retention. All females tested were found to retain delta r in its latent state. The delta retention in S^b-5 chromosome lines isolated from S^r-Cy/S^b-5 heterozygous strains which carried delta r but not delta b was examined. The descendant Cy/S^b-5 lines from the heterozygous strains had accumulated their specific delta, delta b. These findings are consistent with those obtained in an earlier study, and lead to the conclusion that delta is associated inseparably with each specific sensitive chromosome.     

Molecular and cytological characterization of an extra acrocentric chromosome that restores male fertility of wheat in the msH1 CMS system

A new CMS system designated as ‘msH1’ has been reported in bread wheat using the cytoplasm of H. chilense. While testing this system in different wheat backgrounds, a highly fertile line with chromosome number 42 plus an extra acrocentric chromosome was obtained. The extra chromosome did not pair with any wheat chromosome at meiosis, and progeny from this line which lack the acrocentric chromosome showed pollen abortion and male sterility. In order to establish the origin of this chromosome, FISH using H. chilense genomic DNA as probe was used and showed that it had originated from H. chilense chromosome(s). The novel chromosome did not possess sequences similar to wheat rDNA; however, the probe pSc119.2 from S. cereale containing the 120 bp family was found to occur at the end of its long arm. Data obtained from FISH and EST molecular markers confirm that the long arm of the acrocentric chromosome is indeed, the short arm of chromosome 1H^ch from H. chilense. We suggest that the novel chromosome originated from a deletion of the distal part of the long arm of chromosome 1H^ch. Neither the 1H^chS short arm, nor the whole chromosome 1H^ch restores pollen fertility of the alloplasmic wheat. Therefore, the restorer gene on the acrocentric chromosome must be located on the retained segment from the hypothetical 1H^chL, while some pollen fertility inhibitor could be present on the deleted 1H^chL distal segment. Disomic addition of the acrocentric chromosome was obtained and this line resulted fully stable and fertile.     

The female-killing chromosome of the silkworm, Bombyx mori, was generated by translocation between the Z and W chromosomes

Bombyx mori is a female-heterogametic organism (female, ZW; male, ZZ) that appears to have a putative feminizing gene (Fem) on the W chromosome. The paternally transmitted mutant W chromosome, Df(p ^Sa + ^p W + ^od )Fem, derived from the translocation-carrying W chromosome (p ^Sa + ^p W + ^od ), is inert as femaleness determinant. Moreover, this Df(p ^Sa + ^p W + ^od )Fem chromosome has been thought to have a female-killing factor because no female larvae having the Df(p ^Sa + ^p W + ^od )Fem chromosome are produced. Initially, to investigate whether the Df(p ^Sa + ^p W + ^od )Fem chromosome contains any region of the W chromosome or not, we analyzed the presence or absence of 12 W-specific RAPD markers. The Df(p ^Sa + ^p W + ^od )Fem chromosome contained 3 of 12 W-specific RAPD markers. These results strongly indicate that the Df(p ^Sa + ^p W + ^od )Fem chromosome contains the region of the W chromosome. Moreover, by using phenotypic and molecular markers, we confirmed that the Df(p ^Sa + ^p W + ^od )Fem chromosome is connected with a partially deleted Z chromosome and that this fused chromosome behaves as a Z chromosome during male meiosis. Furthermore, we demonstrated that the ZZW-type triploid female having the Df(p ^Sa + ^p W + ^od )Fem chromosome is viable. Therefore, we concluded that the Df(p ^Sa + ^p W + ^od )Fem chromosome does not have a female-killing factor but that partial deletion of the Z chromosome causes the death of the ZW-type diploid female having the Df(p ^Sa + ^p W + ^od )Fem chromosome. Additionally, our results of detailed genetic analyses strongly indicate that the female-killing chromosome composed of the Df(p ^Sa + ^p W + ^od )Fem chromosome and deleted Z chromosome was generated by translocation between the Z chromosome and the translocation-carrying W chromosome, p ^Sa + ^p W + ^od .     

A marked ring-Y-chromosome in Drosophila hydei with a new type of white variegation

A ring-Y chromosome, R(Y)w ^m, of D. hydei is described which carries a complete set of fertility genes, a NOR region and a small X-chromosomal insertion (w ^m), which may be used as a marker. The ring has been characterized by various staining techniques. It was derived from a w ^mCo Y chromosome by X-ray treatment of spermatocytes. Its mode of origin allows to fix the gene order in the distal region of the long arm of the w ^mCoY chromosome. The white ⁺ gene included in the ring shows a new type of position-effect variegation which is described and discussed in the context of an earlier hypothesis on a dual function of the white locus.     

Construction of an Unstable Ring-X Chromosome Bearing the Autosomal Dopa Decarboxylase Gene in Drosophila melanogaster and Analysis of Ddc Mosaics

An unstable Ring-X chromosome, Ddc⁺- Ring-X carrying a cloned Dopa decarboxylase (Ddc) encoding segment was constructed. The construction involved a double recombination event between the unstable Ring-X, R(1)w^vC and a Rod-X chromosome which contained a P-element mediated Ddc ⁺ insert. The resulting Ddc⁺-Ring-X chromosome behaves similarly to the parent chromosome with respect to somatic instability. The Ddc⁺-Ring-X chromosome was used to generate Ddc mosaics. Analyses of Ddc mosaics revealed that while there was no absolute requirement for the Ddc ⁺ expression in either the epidermis or the nervous system, very large mutant clones did affect the viability of the mosaic.     

Variation in size and location of the Ag-NOR in the Atlantic halibut (<Emphasis Type="Italic">Hippoglossus hippoglossus</Emphasis>)

The distribution of differentially stained chromatin was studied in the Atlantic halibut (Hippoglossus hippoglossus) chromosomes (2n = 48). Four pairs of homologous chromosomes were identified using a combination of traditional cytogenetic staining techniques (Giemsa/DAPI/CMA3/Ag-NO3). Chromosome 1 showed a length polymorphism (1^S-short, 1^L-long isoforms of the chromosome 1) which was related to the variation of the size of the Ag-NORs. In one specimen the Ag-NOR was translocated from chromosome 1 into the telomeric region on the q-arm of the chromosome 2 forming a derivative chromosome der(2)t(1^S;2)(q?;q?). Four Ag-NOR genotypes have been shown: 1^S1^S, 1^S1^L, 1^L1^L and 1^S der(2)t(1^S;2)(q?;q?). The chromosome rearrangements did not leave any interstitially located telomeric sequences and the telomeres were confined to the ends of the chromosomes. A single chromosomal location of 5S rDNA clusters was found using the PRINS technique. In the extended metaphase spreads two adjacent clusters of 5S rDNA could be seen on one chromosome while condensed chromatin gave a single hybridization signal. Double 5S rDNA signals on the same chromosome arm suggested paracentric inversion of the minor rDNA site. 5S rDNA clusters were not co-localized with Ag-NORs. Although female and male karyotypes were compared no sex related cytogenetic markers were found.     

Third Case of Chronic Lymphocytic Leukaemia in a Carrier of the Inherited Ch1 Chromosome

Chronic lymphocytic leukaemia has developed in three siblings who are all carriers of the abnormal Ch¹ chromosome. ³H-thymidine autoradiography showed Ch¹ to be a G₂ autosome, from which the short arm is absent, and not G₁, which is trisomic in Down''s syndrome and which is believed to form the abnormal Ph¹ chromosome. Ch¹ is not of general significance in the aetiology of chronic lymphocytic leukaemia, but it must be considered as a possible predisposing factor to leukaemia in the present family.     

R factor variants with enhanced sex factor activity in Pseudomonas aeruginosa

Summary The R factor R68 readily promotes chromosome transfer in Pseudomonas aeruginosa strain PAT, but shows little such sex factor activity in strain PAO. A variant of this plasmid, R68.45, has been isolated which produces recombinants in PAO plate matings at frequencies of 10^-3–10^-5 per donor cell for markers in the 0–60 min region of the chromosome. Little or no chromosome transfer was shown in liquid media. The kinetics of chromosome transfer were studied by interrupting matings on solid media with nalidixic acid. Five chromosomal markers, mapping in widely spaced regions of the chromosome all entered 3–5 min after initiation of mating. These results, combined with linkage studies, indicate that R68.45, unlike the Pseudomonas sex factors FP2 and FP39, promotes chromosome transfer from a range of origin sites and can thus be used for mapping the region of the P. aeruginosa chromosome later than 40 min.R68.45 and other similar variants were isolated from rare chromosomal recombinants appearing in crosses between PAO(R68) donors and PAO recipients in which selection for argB ⁺ was made. Selection for other chromosomal markers did not result in such variants suggesting that plasmids of the R68.45 type arise by recombination of genetic material between the R68 plasmid and certain regions of the bacterial chromosome.     

A transmissible dicentric chromosome in Drosophila melanogaster

A transmissible dicentric chromosome was recovered in Drosophila melanogaster. The radiation-induced secondary chromosome rearrangement consists essentially of the entire Y and fourth chromosomes joined by 2R heterochromatin. The Y ^S · Y ^L 2Rh4 · chromosome pairs with the X and the free fourth chromosome to form a trivalent in meiosis that is unusual because it forms few chromosome bridges in primary spermatocytes and is transmitted at high frequency. We suggest that the orientation of the weaker fourth chromosome kinetochore eventually fails when opposing the stronger Y kinetochore so that the Y ^S · Y ^L 2Rh4 · moves to the pole to which the Y kinetochore is oriented. There is however an increased frequency of sex chromosome nondisjunction (14%) and of chromosome laggards (6%) in primary spermatocytes; the frequency of exceptional progeny of males containing the Y ^S · Y ^L 2Rh4 · was 7.44% compared with 0.25% in the controls. Disruption of normal sex chromosome disjunction also occurs in females containing the Y ^S · Y ^L 2Rh4 · and a compound X chromosome; the frequency of exceptional progeny was 2.55% versus 0.91% in the controls. Chromosome nondisjunction appears to occur when orientation of the X and Y kinetochores to the same pole is stabilized through tension by the orientation of one or both fourth chromosome kinetochores to the opposite pole. During anaphase, the orientation of the fourth chromosome kinetochore of the Y ^S · Y ^L 2Rh4 · appears to fail and the X and Y ^S · Y ^L 2Rh4 · chromosomes move to the same pole. Y ^S · Y ^L 2Rh4 · chromosome laggards occur with both the Y and fourth chromosome kinetochores amphitelically oriented. This orientation appears to be stable as a result of equal opposing forces toward opposite poles.     

Engineering of interstitial foreign chromosome segments containing the K+/Na+ selectivity gene Kna1 by sequential homoeologous recombination in durum wheat

Targeted homoeologous recombination mediated by the absence of the Ph1 locus is currently the most efficient technique by which foreign genes can be introgressed into polyploid wheat species. Because intra-arm homoeologous double cross-overs are rare, introgressed foreign genes are usually on terminal foreign chromosome segments. Since the minimum length of such a segment is determined by the position of a gene in the chromosome, large chromosome segments with undesirable genetic effects are often introgressed. Introgression of foreign genes on short interstitial segments based on two cycles of homoeologous recombination is described here. The utility of the technique is demonstrated by the introgression of the Kna1 locus, which controls K⁺/Na⁺ selectivity in T. aesivum L., on short interstitial segments of chromosome 4D into chromosome 4B of Triticum turgidum L. The level of recombination in a homoeologous segment is not significantly affected by a juxtaposed proximal homologous segment in the absence of the Ph1 locus.     

Changes in the structure of B A chromosomes in maize

Summary A class of mosaic endospersm involving the marker Su _I was observed among the progeny of individuals hyperploid for the chromosome B ⁴ and genetically analyzed. The exceptional individuals showing mosaic endosperm were found when the hyperploid material was used as pollen source. While in some cases mosaicism was limited to the endosperm tissue, with no apparent consequences in the embryo, in others the mosaicism was transmitted to the progeny, which showed changes in the structure of the B ⁴ chromosome, with the formation of unstable chromosomes whose genetic behaviour was similar to that of ring chromosomes. This interpretation was cytologically confirmed. In other cases the B ⁴ chromosome analyzed in mosaic endosperm individuals underwent altered transmission frequencies or loss, suggesting that its original structure had been modified by breakage-fusion-bridge cycles. The changes in this chromosome revealed by the mosaic phenotype are discussed in relation to the original structure of the B chromosome and the B ⁴ hyperploid condition.The author dedicates the present paper to Prof. Marcus M. Rhoades with esteem and gratitude.     

A ‘zebra’ chromosome arising from multiple translocations involving non-homologous chromosomes

An alloplasmic wheat line carrying a zebra chromosome z5A was isolated from the derivatives of an Elymus trachycaulus x Triticum aestivum cv Chinese Spring hybrid. Chromosome z5A was named zebra because of its striped genomic in situ hybridization pattern. z5A consists of four chromosome segments derived from E. trachycaulus and four chromosome segments, including the centromere, from wheat. The short arm of z5A paired with the telocentric chromosome 1H^tS of E. trachycaulus and the long arm with the long arm of normal 5A. z5A also carried several genetic markers derived from 1H^tS. Chromosome 1H^t was the only E. trachycaulus chromosome found in the sib plants of a previous generation from which z5A was derived. Monosomic 5A and telocentric chromosome 5AL were also found in most of the sib plants. The zebra chromosome most probably originated from spontaneous multiple translocations between chromosomes 5A and 1H^tS or 5A and 1H^t.     

Resistance to eyespot of wheat, caused by Tapesia yallundae, derived from Thinopyrum intermedium homoeologous group 4 chromosome

Thinopyrum intermedium was identified previously as resistant to Tapesia yallundae, cause of eyespot of wheat. Using GUS-transformed isolates of T. yallundae as inoculum, we determined that wheat lines carrying Th. intermedium chromosome 4Ai#2 or the short arm of chromosome 4Ai#2 were as resistant to the pathogen as the eyespot-resistant wheat- Th. ponticum chromosome substitution line SS767 (PI 611939) and winter wheat cultivar Madsen, which carries gene Pch1 for eyespot resistance. Chromosome 4E from Th. elongatum and chromosome 4J from Th. bessarabicum did not confer resistance to T. yallundae. Genome-specific PCR primers confirmed the presence of Thinopyrum chromatin in these wheat- Thinopyrum lines. Genomic in situ hybridization using an St genomic probe from Pseudoroegneria strigosa demonstrated that chromosome 4Ai#2 belongs to the J^s genome of Thinopyrum. The eyespot resistance in the wheat- Th. intermedium lines is thus controlled by the short arm of this J^s chromosome. This is the first report of resistance to T. yallundae controlled by a J^s genome chromosome of Th. intermedium.     

Instability of the maize B chromosome

Summary The B ⁹ chromosome of maize exhibits a very ordered type of instability at the second pollen mitosis, when nondisjunction may reach a level of 95%. Much less commonly the chromosome is unstable during early development of the kernel. Instability in the kernel produces recessive sectors in either the endosperm or the sporophyte, reflecting the absence of dominant markers carried by the B ⁹. The causes of B ⁹ loss in the endosperm and the sporophyte were investigated for the two observable classes of sectoring: fractional loss (single event) and multiple loss (mosaic pattern). The fractional class represents isochromosome formation by the B ⁹ (Carlson, 1970, 1971). Data presented here suggest that the isochromosome is a by-product of telocentric formation at the second pollen mitosis, and does not arise directly from the B ⁹ chromosome. The chromosomal basis for the mosaic pattern of B ⁹ loss is not completely known. However, one class of mosaic kernels displays a heritable instability of the B ⁹ chromosome which apparently results from ring chromosome formation by the B ⁹. The time of origin of the ring B ⁹ chromosome is prior to the second pollen mitosis, since the unstable chromosome generated in the male parent is transmitted to both the endosperm and the sporophyte. Finally, a genetic factor controlling B ⁹ stability in the developing endosperm has been found. A single plant (1818-1), crossed as a female parent to a B ⁹-containing stock, induced a mosaic pattern of B ⁹ loss in the endosperm at a very high rate. The characteristics of this plant are being investigated.Dedicated with much appreciation and respect to Dr. M. M. Rhoades on the occasion of his 70th birthday.     

Cytogenetic Analysis of Chromosome 3 in DROSOPHILA MELANOGASTER: Mapping of the Proximal Portion of the Right Arm

In order to define more precisely the most proximal portion of chromosome 3R in Drosophila melanogaster, several new chromosome aberrations involving this region have been recovered and analyzed. These new arrangements were recovered as induced reversions of two dominant mutations, Antp^Ns and dsx^D, located in the region of interest. The results of the analysis have allowed the localization of several existing mutations, have further elucidated the complex homoeotic locus which resides in this region, and have confirmed the efficacy of this type of screen in the analysis of specific chromosome regions.     

Autonomy of the wingless mutation in Drosophila melanogaster

Summary T(Y;2) translocations were used to cytologically localise the wingless locus of Drosophila melanogaster. We found that an existing T(Y;2), which is an insertion of a segment of 2L into the Y chromosome, has wg ⁺ within this insert. This Y chromosome was used to generate an attached XY chromosome containing wg ⁺. The mutation claret-nondisjunctional (ca ^nd) was used to induce the loss of this XY chromosome and thus generate gynandromorphs with wg ¹/wg ¹ male tissue and wg ⁺/wg ¹/wg ¹ female tissue. Analysis of these gynanders demonstrated that a genotypically wingless mutant hemithorax is usually also phenotypically mutant in these half body mosaics; thus wg ¹ is discautonomous. This observation is of interest as it is known that wg is not cell autonomous.     

Late replication patterns in adult and embryonic mice carrying Searle's X-autosome translocation

Bromodeoxyuridine-dye technique analysis of X chromosome DNA synthesis in female adult and fetal mice carrying the balanced form of the T(X; 16) 16H translocation demonstrated that the structurally normal X chromosome was late replicating (and hence presumably inactive) in 93% of the adult cells and 99% of the 9-day embryo cells, with the X¹⁶ chromosome late replicating in the remaining cells. We conclude from these results that in T16H/+ females either there is preferential inactivation of the normal X chromosome or that, if inactivation is random, cell selection takes place before 9 days of development. Two 9-day female embryos with an unbalanced karyotype were also studied; both had two late-replicating chromosomes in most of their cells, one being the chromosome 16^X, the other a normal X chromosome. These results, together with the presence of a late-replicating X¹⁶ chromosome in T16H/+ adult and fetal mice, support the concept that more than one inactivation center is present on the X chromosome of the mouse because the X¹⁶ and the 16^x chromosomes can be late replicating.