Blood clam (Anadara inflata) hemoglobins. Partitions in aqueous two-polymer phase systems and alkali denaturation

Anadara inflata is a clam which not only has red blood cells in its hemolymph but these nucleated cells also contain two hemoglobins. Clam hemoglobins were subjected to partition in aqueous dextran-polyethylene glycol two-phase systems and their denaturation by alkali was studied.

1.

1. The two hemoglobins, I and II, in the clam, which have, respectively, mol. wts. 34000 and 68000, but are structurally distinct, give slightly higher partition coefficients (K) than human hemoglobin A (which has the highest K of all mammalian hemoglobins studied so far). They are not, however, too different from each other at thier isoelectric points. These data reinforce the finding that hemeproteins (unlike nonhemeprotiens) give K values in two-polymer phase systems that are relatively independent of their molecular weights.     

Membrane surface properties of reticulocytes from rats rendered severely anemic with phenylhydrazine as determined by partition in aqueous phase systems

Partition was studied in aqueous dextran-polyethylene glycol two-phase systems of reticulocytes from rats rendered severely anemic with phenylhydrazine.

1.

1. The countercurrent distribution of reticulocyte populations from phenylhydrazine-injected rats indicate that these are highly heterogeneous. The distribution patterns obtained include separation of such reticulocytes into two distinct sub-populations, a broad (and therefore obviously heterogeneous) curve, or a distribution intermediate between these.     

Insect herbivory on native and exotic aquatic plants: phosphorus and nitrogen drive insect growth and nutrient release

The invasive clam Corbicula fluminea causes severe environmental and economic impacts in invaded sites and fouled water-dependent industries. The biological control of invasive species has potential as an effective, safe and low-cost tool. The potential of using direct (clam consumption) and indirect approaches (predator-avoidance behaviour) to control the pest was evaluated, aiming at establishing a proof-of-principle regarding the suitability of such strategies in confined settings (e.g. pipelines, channels, raw water tanks and other water-dependent facilities). Invertebrate (Procambarus clarkii) and vertebrate (Lepomis gibbosus, Luciobarbus bocagei) predators were examined for their control potential. In feeding experiments, barbels foraged upon C. fluminea but ingested very few clams, and clam consumption by crayfish was only observed in the smallest size class (<1 cm). Additional experiments linked these results to the protective role of the clam’s shell. In practical terms, the potential of the fish species as C. fluminea predators is limited, but crayfish can be important predators of small clams. In a second set of experiments, putative predator avoidance by clams was assessed in dual-choice aquaria. Refuge availability, predator diet and light conditions were taken into account. Clam avoidance was observed under particular conditions, but the amplitude of dislocation was limited.     

The effect of temperature on oxygen equilibrium curves of trout blood (Salmo gairdnerii)

• 1.1. Oxygen equilibrium curves were measured on trout red blood cell suspensions at pH 7.8 and 8.4 at 15, 20 and 25 C. Normal red cells and red cells that had been depleted of their ATP content were used.
• 2.2. The equilibrium data were fitted to the Adair's model and the enthalpy (ΔH) and entropy (ΔS) changes for the first and fourth steps of oxygenation and for overall oxygenation were calculated from the temperature dependencies of the Adair constants.
• 3.3. For normal red blood cells, the apparent heat for the first oxygenation step, δh₁, is close to zero.
• 4.4. Temperature insensitivity of this step at physiological pH, combined with a large pH dependence, probably denotes a property of Hb4, the Root effect Hb of trout blood.
• 5.5. At pH 7.8, ΔH₄ is about —4kcal/mol, a small value which may be attributed to the large release of Bohr protons that occurs at the last oxygenation step and corresponds to an endothermic process which opposes to the exothermic oxygenation of the haem.
• 6.6. The ΔH₄ value appears to have a large influence on the enthalpy for overall oxygenation.
• 7.7. Results for ATP-free red cells are consistent with a mere increase in the intracellular pH and suggest that ATP has no specific effect at and above pH_i ~ 7.7.
• 8.8. Effects of temperature and pH on trout red blood cell isotherms emphasize the primary importance of the major component of trout blood, namely Hb4, in trout blood functional properties.

     

Characterization of Bacterial Community Structure in a Drinking Water Distribution System during an Occurrence of Red Water

The role of bacteria in the occasional emergence of red water, which has been documented worldwide, has yet to be determined. To better understand the mechanisms that drive occurrences of red water, the bacterial community composition and the relative abundance of several functional bacterial groups in a water distribution system of Beijing during a large-scale red water event were determined using several molecular methods. Individual clone libraries of the 16S rRNA gene were constructed for three red water samples and one sample of normal water. Beta-, Alpha-, and Gammaproteobacteria comprised the major bacterial communities in both red water and normal water samples, in agreement with previous reports. A high percentage of red water clones (25.2 to 57.1%) were affiliated with or closely related to a diverse array of iron-oxidizing bacteria, including the neutrophilic microaerobic genera Gallionella and Sideroxydans, the acidophilic species Acidothiobacillus ferrooxidans, and the anaerobic denitrifying Thermomonas bacteria. The genus Gallionella comprised 18.7 to 28.6% of all clones in the three red water libraries. Quantitative real-time PCR analysis showed that the 16S rRNA gene copy concentration of Gallionella spp. was between (4.1 ± 0.9) × 10⁷ (mean ± standard deviation) and (1.6 ± 0.3) × 10⁸ per liter in red water, accounting for 13.1% ± 2.9% to 17.2% ± 3.6% of the total Bacteria spp. in these samples. By comparison, the percentages of Gallionella spp. in the normal water samples were 0.1% or lower (below the limit of detection), suggesting an important role of Gallionella spp. in the formation of red water.On occasion, extensive precipitation of iron oxides in drinking water distribution systems manifests as red water at the tap and results in serious deterioration of water quality, with undesirable esthetic and health effects (18, 40, 46). The abundance of ferrous iron in source water or the acceleration of corrosion of iron pipelines after the loosening of chemical and microbial films from the interior surfaces of distribution systems might be the sources of iron oxides in red water. Switching of water sources has been observed to be associated with red water due to disruption of the delicate chemical equilibrium in water supply systems (18). High concentrations of anions, particularly sulfate ions, have been recognized as a causative agent of red water in many cases, reflected in high values on indices such as the Larson-Skold index (18, 29). Other physicochemical factors, such as insufficient disinfection residue, extended hydraulic retention time, low levels of dissolved oxygen, high temperature, low alkalinity, and high chloride concentration, have also been implicated in the emergence of red water (18, 46).In addition to physicochemical factors, microorganisms may also participate in the unique phenomenon of red water. Drinking water distribution systems are a unique niche for microorganisms, despite oligotrophic conditions and the presence of free or combined chlorine (3, 18). Phylogenetically diverse bacterial groups can inhabit the bulk water or biofilms attached to pipes. Culture-based and independent analyses have revealed that members of the class Proteobacteria, including the Alpha-, Beta-, and Gammaproteobacteria, are typically the most abundant bacterial group in water distribution systems, followed by bacterial phyla such as Actinobacteria, Firmicutes, and Bacteroidetes (13, 38). Bacteria inhabiting distribution systems mainly fill functions of diverse carbon source utilization and nitrification, as well as microbial corrosion (3). Meanwhile, during periods of red water, abundant ferrous iron in the bulk water creates favorable conditions for the growth of bacteria in the distribution systems, as this iron scavenges residual chlorine and serves as an energy source for iron-oxidizing bacteria. Some neutrophilic iron oxidizers, such as Gallionella spp. and Leptothrix ochracea, which have occasionally been observed in association with red water events because of their distinct morphology, can promote the precipitation of iron oxides by converting ferrous iron to ferric iron (9, 46). As very little energy can be generated during the oxidation of ferrous to ferric iron, a large quantity of iron needs to be oxidized to support the growth of lithotrophic iron oxidizers. It has been calculated that the ratio of iron to the weight of bacterial cell material could be up to approximately 450 to 500, assuming that the oxidation of ferrous iron provides the sole energy for the synthesis of cell material (9). Emerson et al. have found that the oxidation rate of ferrous iron could be up to 600 to 960 nmol per h per cm³ of mat material that contained up to 10⁹ bacterial cells, most of which were iron oxidizers like Gallionella spp. and Leptothrix ochracea, and the oxidation rate of ferrous iron by iron oxidizers could be as high as four times that of dissolved oxygen (15). These neutrophilic iron oxidizers have been even utilized to remove iron from groundwater by passage of preaerated water through sand filters during drinking water treatment (24, 36). Thus, iron-oxidizing species might play an important role in red water events. With the exception of specific neutrophilic iron oxidizers (e.g., Gallionella spp. and Leptothrix ochracea), the whole microbial community composition in red water and the presence of potentially functional groups, including neutrophilic iron-oxidizing bacteria in red water, is poorly defined, possibly because the appearance of this unique phenomenon in real distribution systems is so irregular. To better understand the mechanisms that drive the emergence of red water, the bacterial community composition and the relative abundance of several functional bacterial groups in a water distribution system of Beijing during a large-scale red water event were determined using several molecular methods. The results of this comprehensive investigation of the biological component of red water will provide valuable information for those managing red water events in water distribution systems.     

Limited diversity associated with duplicated class II MHC-<Emphasis Type="Italic">DRB</Emphasis> genes in the red squirrel population in the United Kingdom compared with continental Europe

The red squirrel (Sciurus vulgaris) population in the United Kingdom has declined over the last century and is now on the UK endangered species list. This is the result of competition from the eastern grey squirrel (S. carolinensis) which was introduced in the 19th century. However, recent evidence suggests that the rate of population decline is enhanced by squirrelpox disease, caused by a viral infection carried asymptomatically by grey squirrels but to which red squirrels are highly susceptible. Population genetic diversity provides some resilience to rapidly evolving or exotic pathogens. There is currently no data on genetic diversity of extant UK squirrel populations with respect to genes involved in disease resistance. Diversity is highest at loci involved in the immune response including genes clustered within the major histocompatibility complex (MHC). Using the class II DRB locus as a marker for diversity across the MHC region we genotyped 110 red squirrels from locations in the UK and continental Europe. Twenty-four Scvu-DRB alleles at two functional loci; Scvu-DRB1 and Scvu-DRB2, were identified. High levels of diversity were identified at both loci in the continental populations. In contrast, no diversity was observed at the Scvu-DRB2 locus in the mainland UK population while a high level of homozygosity was observed at the Scvu-DRB1 locus. The red squirrel population in the UK appears to lack the extensive MHC diversity associated with continental populations, a feature which may have contributed to their rapid decline.     

Kinetic parameters of glucose efflux from human red blood cells under zero-trans conditions

1.

1. Efflux of glucose from human red blood cells under zero-trans conditions has been measured at 20°.     

The size and age structure of <Emphasis Type="Italic">Tridacna crocea</Emphasis> Lamarck, 1819 (Bivalvia: Tridacnidae) in the coastal area of islands of the Cön Dao Archipelago in the South China Sea

In May 2010, an expedition on the research vessel Akademik Oparin explored the populations of the clam Tridacna crocea on reefs of the Bay Canh and Cau islands of the Cön Dao Archipelago in the South China Sea. A retrospective approach using phototechniques revealed a great similarity of the vertical distribution, growth, size, and age composition of the tridacna at these islands. The maximum density of tridacna (25 ind/m²) was characteristic of a depth of about 3 m in the area of reef flat transition to reef slope. The growth of clams can be approximated by a Bertalanffy-type equation: L _t = 133.8[1 ? e ^{?0.1181(t ? 0.2596)}]. The lack of discreteness in the size and age compositions of populations of T. crocea indicated that population recruitment was quite stable over the years. This tends to maintain the population in a relatively stable condition, which enabled us to consider it as a possible reserve for the artificial restoration of populations of the species in impoverished coastal areas of Vietnam.     

Blood values in South American lizards from high and low altitudes

• 1.1. Blood indices were measured in 27 species of lizard from Chile and Argentina occurring at different altitudes ranging from sea-level up to 4600 m.
• 2.2. Contrary to amphibians, none of the hematological values of these lizards, such as hematocrit, hemoglobin concentration, red cell count, mean cell volume, mean cell hemoglobin and mean cell hemoglobin concentration, were found to be correlated with their altitudinal distribution.
• 3.3. Intrageneric comparison of blood values in Liolaemus lizards (seven highland species living above 3000m and 12 lowland species) showed a similar degree of independence from their altitudinal site of capture or from their upper limit of distribution.
• 4.4. As reported for other vertebrate taxa, an inverse correlation between size and number of red blood cells was also found in the studied reptiles.

     

Neuraminidase enhances <Emphasis Type="Italic">in vitro</Emphasis> expansion of human erythroid progenitors

Background

In spite of recent key improvements, in vitro mass production of erythrocytes from human stem cells is still limited by difficulties in obtaining sufficient numbers of erythroid progenitors. In fact, such progenitors are as scarce in the bone marrow as in peripheral blood.

Study design and Methods

We used a two-step culture model of human cord blood-derived erythroid progenitors in the presence or absence of high-purity neuraminidase, in a serum-free, defined culture medium. Granulocytic and megakaryocytic progenitor cell expansions were also studied.

Results

We show that significant enhancement of erythroid cell generation is obtained when CD34⁺ human hematopoietic progenitors are cultured in the presence of neuraminidase. Interestingly, in so doing, expanded red cell progenitors remained erythropoietin-dependent for further expansion and survival, and cells thus generated displayed a normal phenotype. Moreover, the activity of neuraminidase on these cells can be reversed by simple cell washing. Finally, growth of cells of the other myeloid lineages (granulocytes and megakaryocytes) is either decreased or unchanged in the presence of neuraminidase.

Conclusion

This specific feature of neuraminidase, that of stimulation of human red cell progenitor proliferation, provides a safe technique for producing greater numbers of in vitro-generated red blood cells for both basic research and transfusion use.

     

Quantitative Real-Time PCR Assay for QPX (Thraustochytriidae), a Parasite of the Hard Clam (Mercenaria mercenaria)

We developed a real-time quantitative PCR (qPCR) assay targeting the rRNA internal transcribed spacer region of the hard clam pathogen QPX. The qPCR assay was more sensitive than was histology in detecting clams with light QPX infections. QPX was detected in 4 of 43 sediment samples but in none of 40 seawater samples.The thraustochytrid called QPX (for quahog parasite unknown) has caused high mortalities in hatchery-reared and wild hard clams (Mercenaria mercenaria, also known as quahogs) from Prince Edward Island (Canada) to Virginia (United States) since the late 1950s (17, 22, 25, 29). In the summer of 2002, QPX infections appeared in the previously healthy Raritan Bay (off the coast of Staten Island in New York) M. mercenaria population, causing significant clam mortality and closure of the fishery (6). Management of hard clam populations affected by QPX disease is hampered by an incomplete understanding of factors controlling the occurrence and severity of QPX infections. Environmental factors, such as salinity and temperature, appear to be important (22), as do clam population density and the planting of seed from nonlocal sources (7). More quantitative information about the occurrence and progression of QPX disease in relation to these and other variables would support better prediction of, and response to, QPX outbreaks. QPX is thought to be an opportunistic pathogen (4, 7, 11), capable of growing outside its host. However, there is very little known about substrates that might support QPX organisms outside of hard clams (4). The abilities to detect and enumerate QPX cells in potential reservoirs would allow the dynamics of the QPX organism in the environment to be related to the occurrence of QPX disease, offering new insight into fundamental questions about the natural transmission mechanisms of the infection.The 18S ribosomal DNA (rDNA) primer pair QPX-F and QPX-R2 can be used in a standard PCR assay to detect the presence of QPX DNA in clam tissue samples (26). Unfortunately, the products are too long (∼650 bp), and often include too much primer dimer, for use in a SYBR green real-time quantitative PCR (qPCR) assay. The low sequence variability in rRNA genes made it difficult to design other primers specific for QPX 18S rDNA. Instead, we used our previously reported rRNA internal transcribed spacer (ITS) region (including ITS1, the 5.8S rRNA gene, and ITS2) sequences for QPX isolates from Massachusetts and New York (20) to develop a qPCR assay targeting the more variable ITS region (1).     

Characterisation of 12 microsatellite loci in the Vietnamese commercial clam <Emphasis Type="Italic">Lutraria rhynchaena</Emphasis> Jonas 1844 (Heterodonta: Bivalvia: Mactridae) through next-generation sequencing

The marine clam Lutraria rhynchaena is gaining popularity as an aquaculture species in Asia. Lutraria populations are present in the wild throughout Vietnam and several stocks have been established and translocated for breeding and aquaculture grow-out purposes. In this study, we demonstrate the feasibility of utilising Illumina next-generation sequencing technology to streamline the identification and genotyping of microsatellite loci from this clam species. Based on an initial partial genome scan, 48 microsatellite markers with similar melting temperatures were identified and characterised. The 12 most suitable polymorphic loci were then genotyped using 51 individuals from a population in Quang Ninh Province, North Vietnam. Genetic variation was low (mean number of alleles per locus = 2.6; mean expected heterozygosity = 0.41). Two loci showed significant deviation from Hardy–Weinberg equilibrium (HWE) and the presence of null alleles, but there was no evidence of linkage disequilibrium among loci. Three additional populations were screened (n = 7–36) to test the geographic utility of the 12 loci, which revealed 100 % successful genotyping in two populations from central Vietnam (Nha Trang). However, a second population from north Vietnam (Co To) could not be successfully genotyped and morphological evidence and mitochondrial variation suggests that this population represents a cryptic species of Lutraria. Comparisons of the Qang Ninh and Nha Trang populations, excluding the 2 loci out of HWE, revealed statistically significant allelic variation at 4 loci. We reported the first microsatellite loci set for the marine clam Lutraria rhynchaena and demonstrated its potential in differentiating clam populations. Additionally, a cryptic species population of Lutraria rhynchaena was identified during initial loci development, underscoring the overlooked diversity of marine clam species in Vietnam and the need to genetically characterise population representatives prior to microsatellite development. The rapid identification and validation of microsatellite loci using next-generation sequencing technology warrant its integration into future microsatellite loci development for key aquaculture species in Vietnam and more generally, aquaculture countries in the South East Asia region.     

Evaluation of protein Z plasma level in beta-thalassemia major patients in Ahvaz city in Iran

Objectives

Thrombotic episodes occurred frequently in beta-thalassemia major (BTM) patients, leading to hypercoagulability of plasma. Protein Z (PZ) is a vitamin-K-dependent anti-coagulation factor that plays a role in the human homeostatic process. The objective of the current study is to investigate the distribution pattern of PZ plasma concentrations between BTM patients and the normal population in Ahvaz city, the center of Khuzestan province, southwest of Iran.

Material and Methods

Forty confirmed BTM patients and 40 healthy volunteers were evaluated for complete blood count (CBC) indices and PZ plasma levels. CBC samples were measured using an automated cell counter, and PZ was assayed with an immunoassay method. Statistical analysis was conducted using SPSS software. The ROC curve and binary logistic regression estimated the sensitivity, specificity, and Odd’s ratio for PZ measurement.

Results

The mean±SD of the PZ plasma level in normal individuals was 1.68±0.63 μg/mL, and in BTM patients, it was 1.10±0.52 μg/mL. This shows a significant reduction of PZ in BTM patients statistically (CI = 0.99; p<0.001). Further, the mean±SD of the PZ plasma levels in BTM patients who received washed red blood cells was not significantly different from that of patients undergoing packed red blood cell therapy (CI = 0.95; p = 0.320). The area under the curve (AUC) for PZ was 0.759 (p = 0.00). The cut-off value = 1.4 μg/mL of the PZ plasma level had at least 70% sensitivity and specificity in BTM patients.

Discussion

Several epidemiologic studies have shown thromboembolism episodes in BTM patients. In the current study, PZ was reduced significantly in BTMs.

Conclusion

We noticed that BTMs have lower plasma PZ concentration might be predisposed to BTM.

     

Associations of high-altitude polycythemia with polymorphisms in <Emphasis Type="Italic">PIK3CD</Emphasis> and <Emphasis Type="Italic">COL4A3</Emphasis> in Tibetan populations

Background

High-altitude polycythemia (HAPC) is a chronic high-altitude disease that can lead to an increase in the production of red blood cells in the people who live in the plateau, a hypoxia environment, for a long time. The most frequent symptoms of HAPC include headache, dizziness, breathlessness, sleep disorders, and dilation of veins. Although chronic hypoxia is the main cause of HAPC, the fundamental pathophysiologic process and related molecular mechanisms responsible for its development remain largely unclear yet.

Aim/methods

This study aimed to explore the related hereditary factors of HAPC in the Chinese Han and Tibetan populations. A total of 140 patients (70 Han and 70 Tibetan) with HAPC and 60 healthy control subjects (30 Han and 30 Tibetan) were recruited for a case-control association study. To explore the genetic basis of HAPC, we investigated the association between HAPC and both phosphatidylinositol-4,5-bisphosphonate 3-kinase, catalytic subunit delta gene (PIK3CD) and collagen type IV α3 chain gene (COL4A3) in Chinese Han and Tibetan populations.

Results/conclusion

Using the unconditional logistic regression analysis and the false discovery rate (FDR) calculation, we found that eight SNPs in PIK3CD and one SNP in COL4A3 were associated with HAPC in the Tibetan population. However, in the Han population, we did not find any significant association. Our study suggested that polymorphisms in the PIK3CD and COL4A3 were correlated with susceptibility to HAPC in the Tibetan population.

     

Molecular evidence of symbiotic activity between <Emphasis Type="Italic">Symbiodinium</Emphasis> and <Emphasis Type="Italic">Tridacna maxima</Emphasis> larvae

Dinoflagellates in the genus Symbiodinium (zooxanthellae) provide the photosynthesis that sustains the majority of primary production in coral reefs. They occur symbiotically with several phyla, including mollusks such as giant clams (Tridacna spp.). This mutualistic association is obligatory for the giant clams, but the exact point in which this symbiosis is established and the main translocated photosynthate are unknown. In this study, we tracked the expression of specific genes for symbiosis and glycerol synthesis during a time course experiment. Giant clam larvae were raised until 75 h post-fertilization and then infected with cultured isolates of Symbiodinium clade A3. Expression of symbiosis-specific and housekeeping genes was monitored at four time points. The expression of H⁺-ATPase, a symbiosis-specific gene in Symbiodinium, was observed at 24 h after symbiont acquisition by the clam larvae. The expression of an enzyme responsible for glycerol synthesis was also observed. Together, these results show that the symbiotic relationship was already in place 24 h after Symbiodinium acquisition, during veliger larval stage. This is the first report using a molecular symbiosis-specific marker that supports symbiotic activity between Symbiodinium and a metazoan larva of an organism that acquires symbionts horizontally. From the expression of the glycerol-synthesizing gene, it was qualitatively determined that Symbiodinium cells may produce glycerol regardless of whether they are free-living or in symbiosis.