Cytogenetics,biogeography and biology of Santolina ageratifolia Barnades ex Asso (Asteraceae: Anthemideae)

Santolina ageratifolia Barnades ex Asso is a natural autohexaploid (2n = 6x = 54, 54 + 1B), endemic to Teruel Province, Spain and inhabits a substrate derived from sandstone, red limolite and quartzite. Three chromosome formulae are found: 30m + 12sm + 12st, present in 52% of the descendants (52 metaphase), 24m + 5m‐1sm + 18sm + 6st in 39% of the descendants (39 metaphase) and 24m + 5m‐1sm + 18sm + 6st + 1B in 9% of the descendants (9 metaphase). Chiasmata are mostly interstitial rather than terminal, giving rise to the formation of cruciform structures. The predominance of bivalent configurations in the meiosis and the exclusively bivalent formation in four individuals indicate that this species has a strong tendency towards diploidization. Secondary association of bivalents is observed in the number of 2, 4–6 chromosomes associated, the average being 4.21 ± 1.20 chromosomes. The variation in the chromosomal characteristics suggests chromosome translocation and/or inversions. This species is partially sterile, with a mean pollen fertility of 40.56% and a mean fructification of 34.24%. The frequencies of multivalents and pollen fertility have a strongly significant effect on fructification percentage. Phenotypic variation in habits is not correlated with karyotype characteristics. The cytogeography of the polyploid taxa of the Santolina rosmarinifolia aggregate is discussed. © 2008 The Linnean Society of London, Botanical Journal of the Linnean Society, 2008, 157 , 797–807.     

Analyses of multivariately determined community matrices using cluster analysis and multidimensional scaling

Linear discriminant analysis was used to compute the p-variate MACARTHUR-LEVINS and Density Overlap measures of niche overlap between all pairs of 24 passerine bird species. The overlap values for the species pairs were then organized into a community matrix for each approach. The relationships inherent in the community matrices were structured by cluster analysis and non-metric multidimensional scaling. Cluster analysis identified the highly related species groups whereas multidimensional scaling demonstrated community wide relationships. In particular, the scaling approach clearly delineated shrub density and ground cover gradients.     

A new species of Anthemis L. (Asteraceae) from Central Spain

CARRETERO, J. L., 1992. A new species of Anthemis L. (Asteraceae) from Central Spain. A new species of Anthemis is described from the eastern Toledo Mountains. The morphological relationships to other taxa, as well as the chorology and ecology of the new species are presented.     

A new Spanish species of Tragopogon (Asteraceae: Lactuceae)

Tragopogon cazorlanum (Asteraceae: Lactuceae) is proposed as a new Spanish species with distribution restricted to the Baetic mountains (south-eastern Spain). Its morphological, palynological, chromosomal, biogeographical and ecological features are discussed, as well as its main relationships and differences with reference to other Spanish species of the genus.  © 2004 The Linnean Society of London, Botanical Journal of the Linnean Society , 2004, 146 , 505–511.     

Comparison of flowering time and embryogenesis in Spanish and Portuguese populations of Lupinus albus L. (Leguminosae)

AWOPETU, J. A., 1988. Comparison of flowering time and embryogenesis in Spanish and Portuguese populations of Lupinus albus L. (Leguminosae). Investigations were carried out on flowering-time, leaf or node number on the primary stem and embryo morphogenesis in 16 land races of Lupinus albus collected from the Iberian peninsula, using 'Kali' and 'Kievskij Mutant' as early-flowering reference cultivars. Observations showed that none of the Spanish or Portuguese introductions equalled 'Kali' and 'Kievskij Mutant' with respect to earliness in flowering and low leaf or node number, as well as shorter rate of embryo development and eventual pod maturation. However, genetic variability was established within the land races to indicate intermediate and late-flowering types that could respond to selection for eventual adaptation to central and northern Europe.     

Morphological variation among populations of Lecocarpus (Asteraceae) on the Galápagos Islands

Representative samples were collected from almost all known populations of the endemic Galapagos genus Lecocarpus. Multivariate statistical methods were applied to morphological characters to investigate differentiation among species and populations. In discriminant analysis no misclassifications were made among species. Populations of L. darwinii and L. lecocarpoides were better discriminated than populations of L. pinnatifidus . Principal Component Analysis (PCA) separated species well although intermediate populations occur between L. darwinii and L. lecocarpoides . Clear patterns of within-species differentiation were seen among populations of L. darwinii and L. lecocarpoides , but not among populations of L. pinnatifidus .
Populations of L. lecocarpoides at present grow on separate islands. All populations of L. darwinii are found on San Cristóbal, but this island might have been separated into more islands in the past. Lecocarpus pinnatifidus has probably always been growing on only one island. This suggests that the sea is the major barrier to dispersal of the three species. We find it likely that the degree of reproductive isolation caused by the sea is crucial to the differentiation among populations, and that genetic drift rather than adaptation has been responsible. The analyses cast new light on the identity of classic collections made by Darwin in 1835 and Stewart in 1906. © 2007 The Linnean Society of London, Botanical Journal of the Linnean Society , 2007, 154 , 523–544.     

Past distribution and ecology of the cork oak (Quercus suber) in the Iberian Peninsula: a pollen-analytical approach

Abstract.  This study presents pollen-analytical data from continental and offshore Iberian Peninsula sites that include pollen curves of Quercus suber , to provide information on the past distribution and ecology of the cork oak ( Q. suber ). Results centre on a new pollen record of Navarrés (Valencia, eastern Spain), which shows that the cork oak survived regionally during the Upper Pleistocene and was important during a mid-Holocene replacement of a local pine forest by Quercus -dominated communities. This phenomenon appears linked to the recurrence of fire and reinforces the value of the cork oak for reforestation programmes in fire-prone areas. In addition to Navarrés, other Late Quaternary pollen sequences (Sobrestany, Casablanca-Almenara, Padul, SU 8103, SU8113, 8057B) suggest last glacial survival of the cork oak in southern and coastal areas of the Peninsula and North Africa. Important developments also occur from the Late Glacial to the middle Holocene, not only in the west but also in the eastern Peninsula. It is suggested that, in the absence of human influence, Q. suber would develop in non-monospecific forests, sharing the arboreal stratum both with other sclerophyllous and deciduous Quercus and Pinus species.     

Mitochondrial DNA phylogeography of Lissotriton boscai (Caudata, Salamandridae): evidence for old, multiple refugia in an Iberian endemic

In Europe, southern peninsulas served as refugia during cold periods in the Pleistocene, acting both as centres of origin of endemisms and as sources from which formerly glaciated areas were recolonized during interglacial periods. Previous studies have revealed that within the main refugial areas, intraspecific lineages often survived in allopatric refugia. We analysed two mitochondrial markers (nad4, control region, approximately 1.4 kb) in 103 individuals representing the entire distribution of Lissotriton boscai, a newt endemic to the western Iberian Peninsula. We inferred the evolutionary history of the species through phylogenetic, phylogeographic and historical demographic analyses. The results revealed unexpected, deep levels of geographically structured genetic variability. We identified two main evolutionary lineages, each containing three well-supported clades. The first historical split involved populations from central-southwestern coastal Portugal and the ancestor of all the remaining populations around 5.8 million years ago. Both lineages were subsequently fragmented into different population groups between 2.5 and 1.2 million years ago. According to nested clade analysis, at lower hierarchical levels the patterns suggest restricted gene flow with isolation by distance, whereas at higher levels the clades exhibit signatures of contiguous range expansion. Bayesian Skyline Plots show recent bottlenecks, followed by demographic expansions in all lineages. The significant genetic structure found is consistent with long-term survival of populations in allopatric refugia, supporting the 'refugia-within-refugia' scenario for southern European peninsulas. The comparison of our results with other co-distributed species highlights the generality of this hypothesis for the Iberian herpetofauna and suggests that Mediterranean refuges had more relevance for the composition and distribution of present biodiversity patterns than currently acknowledged. We briefly discuss the taxonomic and conservation implications of our results.     

Chemometric evaluation of the anti-cancer pro-drug podophyllotoxin and potential therapeutic analogues in Juniperus and Podophyllum species

Introduction – Podophyllotoxin, deoxypodophyllotoxin, demethylpodophyllotoxin and podophyllotoxone are four therapeutically potent secondary metabolites. There is a dearth of information on the holistic analysis of their distribution pattern in both phylogenetic and ecological contexts. Objectives – To analyse the continuum of the above metabolites in Juniperus and Podophyllum species collected from natural populations in Himalayan environments and the botanical gardens of Rombergpark and Haltern (Germany) using multi‐component LC‐ESI‐MS/MS, coupled with statistically relevant chemometric assessment. Methodology – We evaluated the individual and holistic metabolite profiles and chemometrically correlated the phytochemical loads between various species (infraspecific), organic and aqueous extracts, and populations of the same species from different locations, different species from same location, different species from different locations and infrageneric populations from same and different locations. Results – Multivariate analysis revealed Juniperus x‐media Pfitzeriana as a suitable alternative to Podophyllum hexandrum for commercial exploitation. A significant positive correlation of podophyllotoxone with both podophyllotoxin and demethylpodophyllotoxin, and a negative correlation of podophyllotoxin with both deoxypodophyllotoxin and demethylpodophyllotoxin (infraspecific among Podophyllum), were observed by Kruskal's multidimensional scaling and corroborated by principal component analysis, indicating probable similarity and/or difference between the biosynthetic pathways, and synergistic and/or antagonistic principles, respectively. Finally, linear discriminant analysis and hierarchical agglomerative cluster analysis revealed considerable infrageneric and infraspecific variability in secondary compound spectra and load of the different populations under study. Conclusion – Such holistic studies of plants and their therapeutic metabolites ought to assist in selecting plants, geographical areas and environmental conditions for bioprospecting and global‐scale phytochemical and phylogenetic diversity studies in the future. Copyright © 2010 John Wiley & Sons, Ltd.     

A new endemic species of Epipactis (Orchidaceae) from north-east Portugal

A new species, Epipactis duriensis Bernardos, D. Tyteca, Revuelta & Amich is described and illustrated from north-east Portugal. Notes on its distribution, ecology, karyology, micromorphology and taxonomic relationships are presented as well as molecular data based on ITS analysis. A list of diagnostic differences between E. duriensis and the closely related species E. lusitanica and E. tremolsii is provided.  © 2004 The Linnean Society of London, Botanical Journal of the Linnean Society , 2004, 145 , 239–249.     

Mentor effects in wild species of Helianthus (Asteraceae)

Self-incompatibility (SI) is an effective method for limiting self-fertilization in flowering plant species, but there are circumstances in which an otherwise functional SI system may fail. One of the most intriguing of these is the induction of selfing by mixed loads of self and heterospecific pollen (the mentor effect) because it is likely to occur under natural conditions, such as in hybrid zones. Here we conducted a series of controlled crosses to determine whether mentor effects operate in two SI annual species, Helianthus annuus and H. petiolaris, and whether the failure of SI results in a decrease in the frequency of hybridization between these two species. Of the 1396 achenes examined from pollen mixtures that included varying ratios of self, intraspecific compatible, and interspecific pollen, 71 (5.1%) were selfed. Selfing frequencies were significantly less than expected based on pollen ratios, except when the proportion of intraspecific compatible pollen was low. Hybridization frequencies from these same pollen ratios averaged 41.8% with H. annuus as the maternal species and 13.3% with H. petiolaris as the mother. Analysis of 1404 achenes from pollen mixtures that excluded self pollen resulted in hybridization frequencies for H. annuus (42.2%) and H. petiolaris (18.2%) that do not differ significantly from those including self pollen. Thus, mentor effects do not appear to play an important role in reproductive isolation between these species. On the other hand, even a modest increase in self-fertilization in hybrid populations, such as that due to mentor effects, could enhance the probability of hybrid species establishment.     

Patterns of gene flow and source‐sink dynamics in high altitude populations of the common toad Bufo bufo (Anura: Bufonidae)

Understanding patterns of genetic structure is fundamental for developing successful management programmes for deme‐structured organisms, such as amphibians. We used five microsatellite loci and DNA sequences of the mitochondrial control region to assess the relative influences of landscape (geographic distance, altitude and rivers as corridors for dispersal) and historical factors on patterns of gene flow in populations of the toad Bufo bufo in Central Spain. We sampled 175 individuals from eight populations distributed along two major river drainages and used maximum‐likelihood and Bayesian approaches to infer patterns of gene flow and population structure. The mitochondrial DNA data show closely‐related haplotypes distributed across the Iberian Peninsula with no geographic structuring, suggesting recent differentiation of haplotypes and extensive gene flow between populations. On the other hand, microsatellites provide finer resolution, showing that high altitude populations (> 2000 m) exchange lower numbers of migrants with other populations. The results of Bayesian estimates for recent migration rates in high altitude populations suggest source‐sink dynamics between ponds that are consistent with independent data from monitoring over the past 20 years. © 2008 The Linnean Society of London, Biological Journal of the Linnean Society, 2008, 95 , 824–839.     

The impact of management practices and past demographic history on the genetic diversity of red deer (Cervus elaphus): an assessment of population and individual fitness

The influences of management practices and past demographic history on genetic diversity are of critical relevance to sustainable practices and the conservation of wildlife populations. The red deer (Cervus elaphus) is an interesting model species to address these questions because it has a wide geographical distribution and it has been intensively managed for humans in the last decades. In the present study, we have analyzed the impact of recent management practices on the genetic diversity of Iberian red deer populations and assessed the genetic variation effects on population and individual fitness‐related traits. Four populations subjected to distinct management systems were selected: Cabañeros (CB) and Doñana (DN), not hunted populations; Fraga/Caspe (FG/CP), open hunting area with very low or absent management; and PE, fenced private hunting estate founded 31 years ago through the introduction of deer of different origins. Ten microsatellites were amplified in a total of 172 individuals. Additionally, several fitness‐related traits such as the presence of tuberculosis compatible lesions (TBCL), spleen weight (SW), and body length (BL) were estimated. We found a marked genetic variation and differentiation among populations, suggesting a strong population structure. In the fenced population, the introduction of genetically distinct animals has led to high genetic variability (no evidence of inbreeding) despite intensive management. Lower levels of genetic diversity were observed in two historically isolated natural populations (DN and FG/CP). The past demographic history of Iberian populations appears to be more relevant than the current management policy in shaping the genetic variability of natural populations. Population genetic diversity may correlate with life‐history traits and disease susceptibility, which could compromise the conservation and management of these wildlife populations. Although no significant effects of individual genetic diversity (general and local effect hypotheses) were observed on TBCL, SW and BL, some single‐locus effects had almost significant trends for the TBCL and SW traits. © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2014, 111 , 209–223.     

The varieties of Bauhinia pottsii G. Don in Thailand (Leguminosae-Caesalpinioideae)

 Bauhinia pottsii G. Don, B. subsessilis Craib, B. velutina (Wall. ex Benth.) Baker, B. mollissima (Wall.) Prain, and B. decipiens Craib were recently recognized as five varieties of Bauhinia pottsii G. Don. They grow naturally in southern Myanmar, Thailand, Indochina and the Malay Peninsula. Bauhinia pottsii var. decipiens (Craib) K. Larsen & S. S. Larsen is endemic to Thailand and known only from the type collection, so it was omitted from this study. Quantitative and qualitative morphological characters were examined in 200 specimens using multivariate and univariate analyses to determine the taxonomic relationship among the four. Some variation in qualitative characters was found between the varieties which separated them as previously defined in Flora of Thailand. Forty-three quantitative characters were subjected to cluster analysis to allow an objective classification into groups. The groups were subsequently evaluated by a canonical discriminant analysis. It was found that these characters collectively support the four varieties as defined by qualitative characters. However, the close relationship of varieties mollissima (Wall. ex Prain) K. Larsen & S. S. Larsen and velutina (Wall. ex Benth.) K. Larsen & S. S. Larsen is observed. The linear discriminant function has an overall rate of 98.5% correct classification and is useful for variety classification. Among quantitative characters, petal-claw length and ovarystalk length together with some qualitative characters are useful for key construction to separate the four varieties. Received April 24, 2001 Accepted December 11, 2001     

Postglacial dispersal of the European rabbit (Oryctolagus cuniculus) on the Iberian peninsula reconstructed from nested clade and mismatch analyses of mitochondrial DNA genetic variation

Nested clade analysis was applied to cytochrome b restriction site data previously obtained on 20 natural populations of the European rabbit across the Iberian Peninsula to test the hypothesis of postglacial dispersal from two main refugia, one in the northeast and the other in the southwest. Apart from historical fragmentation that resulted in geographic discontinuity of two distinct mitochondrial DNA (mtDNA) clades A and B, patterns of haplotype genetic variability have been shaped mostly by restricted gene flow via isolation by distance. The distribution of tip versus interior haplotypes suggests that dispersal occurred from both the southwestern and northeastern groups. Dispersal from the southwest had a north and northwest direction, whereas from the northeast it had mostly a western and southern orientation, with subsequent overlap in a southeastern-northwestern axis across the Iberian Peninsula. The analysis of the pairwise mismatch distribution of a 179-181-bp fragment of the mtDNA control region, for seven of those populations, further supports the idea that major patterns of dispersal were in the direction of central Iberia. Additionally, rabbit populations do not show signs of any significant loss of genetic diversity in the recent past, implying that they maintained large population sizes and structure throughout the ice ages. This is congruent with the fact that the Iberian Peninsula was itself a glacial refugium during Quaternary ice ages. Nonetheless, climatic oscillations of this period, although certainly milder than in northern Europe, were sufficient to affect the range distributions of Iberian organisms.     

Geographic variation in allozymes of populations of Salamandra salamandra (Amphibia: Urodela) exhibiting distinct reproductive modes

The populations of the urodele Salamandra salamandra in the Northern Iberian Peninsula exhibit very different coloration patterns and a remarkable range in reproductive modes (from giving birth to a large number of aquatic larvae to a parturition event of just a few fully metamorphosed, i.e. terrestrial, offspring). Electrophoretic study of geographic variation in allozymes shows that this extraordinary diversity, particularly in reproductive modes, is not accompanied by a genetic differentiation of similar magnitude. All the populations sampled along a transect crossing the Northern part of the Iberian Peninsula and encompassing the various reproductive strategies, as previously described, can be ascribed to a single species, because of small interpopulational genetic distances (ranging D_Nei from 0.05 to 0.199) and absence of fixed (diagnostic) alleles. A variety of phenetic and cladistic methods were used to elucidate the relationship among populations, based on allozyme data. These methods defined two well corroborated clusters: the first contains populations of salamanders with a blotched dorsal coloration pattern and characterized by parturition of aquatic larvae; the second group is composed of populations exhibiting a striped dorsal coloration pattern, smaller adult body size, and giving birth to fully metamorphosed terrestrial offspring. The latter group also encompasses some populations where mixed parturition events, which include both larvae and metamorphosed offspring, which have been recorded (Dopazo and Alberch, 1994). The absence of a correlation between genetic and geographic distance suggests that the mode of differentiation of the species is based on at least two successive events of isolation, radiation, and secondary contact between populations. Furthermore, the validity of the described “subspecies” is questioned by our data, which point out the need for a detailed systematic study of Salamandra from a global perspective. “Viviparity”, here meaning giving birth to fully metamorphosed offspring, originated once and occurs as intraspecific, and even as intrapopulational variation. Thus, we confirm a system where a major evolutionary innovation -the acquisition of independence from the aquatic media in the primitive amphibian complex life cycle-, can be studied at the microevolutionary, i.e., intra- and inter-populational level.     

高原鼢鼠(Eospalax baileyi)头骨形态的地理分化

运用单因素方差分析、主成分分析、判别分析和聚类分析,对高原鼢鼠(Eospalax baileyi)4个地区(临潭、天祝、玛曲和碌曲)8个地理群体的头骨形态特征进行综合分析,比较13个特征变量的地理分异,挖掘形态特征的主要变量,并探讨其形态变异与环境的关系。结果发现,群体间13个特征变量均存在显著差异,主成分分析表明13个头骨特征变量可用3个主成分来表述,其累计贡献率达96.981%。颅全长、上齿列长及齿隙长是高原鼢鼠头骨发生分化的主要变量。天祝种群与碌曲种群,及玛曲种群与临潭种群都有重叠,其中碌曲的两个种群相似性最高,玛曲种群和临潭种群与其他种群几乎无重叠,显示完全分化,聚类分析结果与判别分析结果一致。头骨形态与地理因子的相关性分析发现头骨形态大小与海拔成显著的正相关关系。综合分析认为地理隔离、栖息地海拔因子影响下的生态条件等是高原鼢鼠头骨分化的主要因素。