Morphological character evolution and molecular trees in sepiids (Mollusca: Cephalopoda): is the cuttlebone a robust phylogenetic marker?

The sepiids are characterized by their cuttlebone or sepion, an internal shell resulting from secondary mineralization of a chitinous 'gladius'. The various species are identified using a combination of shell criteria and 'soft-part' characters. Using mitochondrial genes, we established phylogenetic relationships of sepiids including the three accepted genera ( Sepia , Sepiella , Metasepia ) and a species complex of uncertain status ( Doratosepion ). We showed the Sepia genus to be paraphyletic and found no direct correlation between geographical distribution and systematics. We mapped, on the molecular tree, shell characteristics commonly used as reliable diagnostic criteria for taxonomy. Due to the plasticity of the shell, these characters did not appear phylogenetically informative. In an attempt to define systematic categories related to phylogenetic relationships, new clear synapomorphies need to be established for each genus, necessitating a revision of the genus Sepia .  © 2006 The Linnean Society of London, Biological Journal of the Linnean Society , 2006, 89 , 139–150.     

叶蝉科昆虫分子系统发育的研究进展

从基因组DNA的提取、研究的基因片段、PCR引物选用、扩增条件以及叶蝉科不同阶元的分子系统发育分析等方面,综述叶蝉科(半翅目:叶蝉科)昆虫分子系统发育的研究进展。目前角顶叶蝉类的研究成果相对较多,大叶蝉亚科次之,其余类群的研究较少或无。线粒体基因与核基因序列联合分析以及线粒体全序列分析以及基因序列与形态数据相结合分析,分子鉴定叶蝉与共生菌之间的协同进化的研究,将是叶蝉分子系统学未来发展的主要研究手段。     

Pattern of Inheritance of Microsatellite Loci in the Squid Loligo pealeii (Mollusca: Cephalopoda)

Six microsatellite loci are described for the squid Loligo pealeii. All loci exhibit some degree of allelic diversity. The pattern of inheritance was tested for 3 loci through an analysis of the filial genotypes from a female-male mating. At all 3 loci, the ratios of the filial genotypes conformed to the ratios expected by Mendelian inheritance. The hypervariable loci will be useful in studies on sexual selection in this species, whereas the relatively less variable loci will be useful to address questions of population structure. Received March 13, 2000; accepted May 22, 2000.     

Back to the future: A synthesis of strepsirrhine systematics

The stepsirrhine primates, defined here as living tooth-combed primates, their immediate ancestor, and all of its descendants, are a diverse assemblage of mammals, viewed by some as exemplars of the richness of evolutionary innovation and by others as uninteresting “primitive” primates. Fortunately, the former view has taken precedence in recent years. The Strepsirrhini have been central to numerous debates touching on key issues such as the congruence of phylogeny to biogeography, the reliability of morphological characters for phylogeny reconstruction, and the relationship of living lineages to fossil lineages. Thanks to important theoretical and methodological advances, particularly within the arena of genetics, a robust picture of strepsirrhine phylogeny is emerging that casts light on these and numerous other evolutionary questions. © 1997 Wiley-Liss, Inc.     

The comparative anatomy and systematics of Jamaican Urocoptidae (Mollusca: Pulmonata)

Jamaican Urocoptidae can be assigned to three subfamilies, the Urocoptinae Pilsbry 1902, Apominae Paul 1982 and Microceraminae Pilsbry 1902, on shell and anatomical characters. Urocoptinae are characterized by a cylindrical or conical decollate shell; genitalia with an elongate spermatheca and no penial retractor muscle; the left ocular retractor arising from the pharyngeal retractor and both oculars divided anteriorly; a short or long radula (L/W ≏ 5 or ≏ 10) with V-shaped rows of teeth, no marginals and the mesocones and ectocones of laterals widely separated in alternating rows; and include the genera Urocoptis Beck, Anoma Albers and Spirostemma Pilsbry & Vanatta. The Apominae are characterized by elongate-cylindrical decollate shells; genitalia with a globular spermatheca and a penial retractor muscle; both ocular retractors arising from the pharyngeal and both divided anteriorly; an extremely long radula (L/W= 25–45) with narrow, weakly-lobed centrals flanked by two enormous laterals with ectocones reduced or absent, and 4–9 marginals; and include the genera Apoma Beck, Mychostoma Albers, Geoscala Pilsbry & Vanatta and Simplicervix Pilsbry. The type species of the type genera of both subfamilies occur in Jamaica and their anatomy is described. Jamaican Microceraminae include one species, Microceramus gossei (Pfeiffer) which has a conical, entire shell; genitalia with an oval spermatheca and no penial retractor muscle; neither ocular retractor arising from the pharyngeal and neither branched anteriorly; a short radula (L/W ≏ 5) with straight rows of lateral teeth and no marginals. Cladistic analysis suggests that Microceramus is the most primitive genus; that within the Urocoptinae Anoma and Spirostemma are more closely related to each other than either is to Urocoptis ; and that within the Apominae, Apoma is less closely related to Mychostoma, Geoscala and Simplicervix than they are to each other.     

Reconstructing the Anomalodesmata (Mollusca: Bivalvia): morphology and molecules

The extant anomalodesmatan bivalves have always proved rather enigmatic and difficult to interpret, both in terms of their relationships to other bivalve taxa and the interrelationships of the constituent families. These difficulties stem from their diverse and often highly specialized life habits which have resulted in a wide array of disparate morphologies, and also from the fact that many are extremely rare. Classifications based on morphological characters have been dogged by fears that convergent and parallel evolution has masked phylogenetic signals. Molecular surveys of members of 12 of the 15 constituent families, using the 18S rRNA gene, have revealed that anomalodesmatans are robustly monophyletic and lie within the basal heterodonts. The Anomalodesmata should no longer be regarded as a subclass, but as a part of the Heterodonta. Here we present an enhanced analysis of 32 anomalodesmatan species (representatives of 12 families). Our results, subjected to Maximum Parsimony, Maximum Likelihood and Bayesian analyses, challenge our understanding of the internal relationships within the Anomalodesmata. In particular they indicate the need for a re-distribution of the families traditionally placed in the Thracioidea and Pandoroidea into a 'thraciid' lineage (Thraciidae + Cleidothaeridae + Myochamidae) and a 'lyonsiid' lineage (polyphyletic Lyonsiidae + Clavagellidae + Laternulidae + Pandoridae). The endolithic Clavagella and endobenthic Brechites and Penicillus form a robust clade. The hypothesis that the carnivorous septibranchs are monophyletic can, thus far, be neither supported nor rejected. Mapping critical morphological characters onto our molecular results provides evidence of multiple loss of some characters (e.g. prismato-nacreous shell microstructure and shell spicules) and also multiple gain of others (e.g. chondrophores).  © 2006 The Linnean Society of London, Zoological Journal of the Linnean Society , 2006, 148 , 395–420.     

Revision of the systematics of algae in the order Laminariales (Phaeophyta) from the Far-Eastern Seas of Russia on the basis of molecular-phylogenetic data

An overview of the literature changes in the systematics of algae in the order Laminariales (Phaeophyta) based on molecular phylogentic data is given. In a recent taxonomic revision by Lane et al., [45], the number and status of the families traditionally included in the order have been revised. One family was transferred to the order Tilopteridales; a new family, the Costariaceae, was described; and the genus Laminaria was split into 2 genera, Laminaria and a newly resurrected genus Saccharina. These innovations have necessitated a systematic revision of the Far Eastern species of the Laminariales. Our genetic studies indicate that 2 species of Laminaria and 12 intraspecific taxa (1 subspecies and 11 forms) from the Russian Pacific coasts should be transferred to the genus Saccharina. The following new nomenclatural combinations are proposed: Saccharina bongardiana, comb. nov. (including 4 forms: f. bifurcata, f. subsessilis, f. subsimplex, f. taeniata) and Saccharina gurjanovae, comb. nov. (including f. lanciformis). In addition, new nomenclature combinations are proposed for intraspecific taxa of the Laminaria species (L. angustata, L. cichorioides, L. japonica) that have already been transferred to the genus Saccharina [45]. These include S. angustata subsp. sibirica, comb. nov., 4 new combinations for the forms of S. cichorioides (f. coriacea, f. sacchalinensis, f. sikotanensis, and f. sinuicola), and 2 new combinations for the forms of S. japonica (f. diabolica, and f. longipes). The taxonomic status of the rest of the members of the Laminariales known from the seas of the Russian Far East is discussed. Laminariaceous algae in this area represent 6 of the 8 known families currently included in the Laminariales (Chordaceae, Pseudochordaceae, Alariaceae, Arthrothamnaceae, Laminariaceae, and Costariaceae).     

On the confusion surrounding Pareledone charcoti (Joubin, 1905) (Cephalopoda: Octopodidae): endemic radiation in the Southern Ocean

Until recently, all papillated specimens of Pareledone were ascribed to the species Pareledone charcoti (Joubin, 1905), of which P. aurorae (Berry, 1917) was considered a junior synonym. Re-examination of the papillated type material of Pareledone, coupled with extensive fishing over several years off the Antarctic Peninsula, has led to a revision of this position. Seven new species of papillated Pareledone are identified from the Antarctic Peninsula region. They are identified by subtle taxonomic characters, such as the morphology and placement of their papillae, although traditional indices often fail to separate the species. Whilst apparently sympatric, there is some evidence of niche separation of these species with respect to depth. A key is provided for their identification.  © 2005 The Linnean Society of London, Zoological Journal of the Linnean Society , 2005, 143 , 75−108.     

Molecular systematics and evolutionary history of catenotaeniid cestodes (Cyclophyllidea)

Phylogenetic relationships, evolutionary history and systematics of tapeworms of the family Catenotaeniidae were studied using nucleotide sequences of the partial 28S nuclear rDNA (ca. 1,500 bp) and mitochondrial 12S–16S DNA (ca. 820 bp) genes. The tapeworm material consists of 29 species, including type species of the genera Catenotaenia Janicki, 1904, Catenotaenioides Haukisalmi, Hardman and Henttonen, 2010, Pseudocatenotaenia Tenora, Mas‐Coma, Murai and Feliu, 1980, Skrjabinotaenia Akhumyan, 1946, Meggittina Lynsdale, 1953, and Hemicatenotaenia Tenora, 1977. The basal phylogenetic structure of the Catenotaeniidae remains unresolved, but it is shown that most of the catenotaeniids in Eurasia and Africa comprise a large clade represented by species of Catenotaenia, Catenotaenioides, Skrjabinotaenia and Meggittina, parasitizing murid, cricetid, nesomyid and sciurid rodents. The results suggest that the divergence and early radiation of this clade have occurred in murid rodents (represented by Apodemus spp. and Mus musculus in the present material) in western Eurasia, followed by colonization of Africa, most likely independently of the colonization of their murid hosts between these continents. There is very little evidence of cophylogeny between hosts and parasites, suggesting that host transfers have played a major role in the divergence of catenotaeniids. In Africa, catenotaeniids have radiated in other murid and nesomyid rodents, and later colonized Madagascar and recolonized Eurasia. The results also show that the subfamily Skrjabinotaeniinae (including Skrjabinotaenia and Meggittina) is monophyletic, but the Catenotaeniinae (including Catenotaenia, Catenotaenioides, Pseudocatenotaenia and Hemicatenotaenia) is clearly non‐monophyletic. In addition, the genera Catenotaenia and Skrjabinotaenia were both found to be non‐monophyletic. Based on the phylogenetic and morphological evidence, several taxonomical changes, mainly new combinations, are proposed. Overall, the present results suggest that the family Catenotaeniidae is in need of major systematic revision.     

Holoplanktonic gastropoda (Mollusca) from the Miocene of Cyprus: systematics and biostratigraphy

Abstract: Eleven randomly chosen outcrops in the Miocene Pakhna Formation of Cyprus were sampled for holoplanktonic Mollusca. Four species of Heteropoda were found, and 24 of Pteropoda, a substantial increase from the two species recorded until now from the Miocene of Cyprus. One pteropod species, Peracle charlotteae sp. nov. (Gastropoda, Pseudothecosomata), is introduced. Age assignments based on holoplanktonic molluscs for the 11 localities are as follows: Langhian (Alassa 1–4), (Serravallian?) Tortonian to Messinian (Episkopi 1), Tortonian (Agios Tychon, Tokhni and the Maroni Marlstone of Khirokitia 1–2) and Tortonian to Early Messinian (Episkopi 2). These age determinations in some cases are at odds with those from previous publications based on calcareous nannofossils and Foraminifera. The sediments underlying the Amathus Channel outcrop yielded insufficient fauna for definitive dating, but we suggest are younger than Late Serravallian. At some localities, particularly in the Alassa area, pteropod assemblages are strongly variable on a bed‐by‐bed basis, and this offers possibilities for future refined biostratigraphical interpretations. This is the first substantial holoplanktonic mollusc fauna described from the eastern Mediterranean basin and allows correlation with assemblages in the central Mediterranean and elsewhere.     

Floral anatomy and systematics of Bretschneidera (Bretschneideraceae)

External morphology and anatomy of the flower and pollen of Bretschneidera sinensis Hemsl. are described to clarify the position of the family Bretschneideraceae relative to the Sapindales and the glucosinolate-producing families. Anatomical and micromorphological characters are investigated and sections are used to understand the structure of the flower. Observation of buds and sections reveal that the flower is obliquely monosymmetric, with the symmetry line running from one petal to a sepal. The upper petal shields the stamens and pistil and becomes positioned apically by the partial resupination of the pedicel. The octomerous androecium is characterized by variable empty positions which are related to the variable insertion of the three carpels. The loss of stamens is linked with a displacement of the remaining stamens. Floral anatomy demonstrates the presence of a nectary extending on the hypanthium from the base of the filaments to the base of the gynoecium. Details of floral anatomy are compared with members of Sapindaceae, Hippocastanaceae, Moringaceae, Akaniaceae, Tropaeolaceae and Capparaceae. Comparison with other characters supports a close relationship with Akaniaceae and Tropaeolaceae in an order Tropaeolales, in concordance with macromolecular results, either at the base of the glucosinolate clade, or in remote connection with the Sapindales. A number of floral anatomical characters with a strong phylogenetic signal are highlighted. © 2002 The Linnean Society of London, Botanical Journal of the Linnean Society , 2002, 139 , 29–45.     

Larval nematodes (Spiruroidea: Cystidicolidae) in Octopus vulgaris (Mollusca: Cephalopoda: Octopodidae) from the northeastern Atlantic Ocean.

Larval nematode parasites (Spiruroidea: Cystidicolidae) are recorded for the first time in Octopus vulgaris Cuvier, 1797 in the northeastern Atlantic Ocean. Prevalence was 16% and mean intensity was 1.46 worms/host. Body length of larval nematodes ranges from 8.3 to 9.3 mm, with a distance from the anterior end to nerve ring from 187.5 to 200 microm, and to excretory pore 194.6-350 microm. Anatomical characteristics, such as deirid, nerve ring, cephalic alae, excretory pore, pseudolabia amphids, sclerotized protuberance, and anus, examined using light microscopy (LM) or scanning electron microscopy (SEM), are illustrated. The nematode was designed as a cystidicolid "Type A" larva. The hemocytic infiltration present in the host tissue around the nematode capsule and the mechanical compression in the infected organs denote the pathogenicity of this nematode. In the study area, O. vulgaris may play the role of an intermediate or paratenic host in the nematode life cycle.     

Morphological perspective on the classification and evolution of Recent Pterioidea (Mollusca: Bivalvia)

The evolutionary relationships of the Recent Pterioidea are inferred from a phylogenetic analysis of representatives of all pterioidean genera based on original observations of anatomy and shell morphology, and an extensive survey of bivalve literature. The well-resolved cladogram supports monophyly for the superfamily, but renders all but one family (the monotypic Pulvinitidae) polyphyletic. In addition, these results reveal a considerable level of convergence and parallelisms through the Pterioidea. The branching order of pterioid genera in the morphological analysis is largely corroborated by the sequence of their appearance in the fossil record. The palaeontological evidence provides important information on dating lineage splitting events and transitional taxa. The proposed phylogeny integrates the cladistic analysis of the Recent Pterioidea with the fossil record and suggests that the crown-group pterioideans probably originated in the Triassic from the Bakevelliidae, an extinct paraphyletic stem group from which the Ostreoidea are also ultimately derived.  © 2006 The Linnean Society of London, Zoological Journal of the Linnean Society , 2006, 148 , 253–312.     

蝗虫分子系统学研究进展

本文从遗传多样性、近缘种鉴别以及分子进化和系统发育重建 3个方面综述了蝗虫分子系统学的研究进展。     

Phylogenetic systematics of leaffishes (Teleostei: Polycentridae,Nandidae)

The Asian (nandid) and Afro‐Neotropical (polycentrid) leaffishes represent two superficially similar, but historically poorly diagnosed families – a situation resulting in a convoluted systematic history. Here, and including for the first time in a molecular study all leaffish genera, we generate a hypothesis of the phylogenetic history of both groups. We analyse a multilocus molecular data set encompassing 257 acanthomorph taxa, carry out a survey and assessment of selected osteological characters for the polycentrid leaffishes and also provide a reanalysis of previously published morphological data. Our results confirm: (1) that the Polycentridae and Nandidae are only remotely related, and hence, the classic leaffishes are diphyletic; (2) that the Polycentridae is monophyletic, with new skeletal synapomorphies being congruent with molecular data in placing the enigmatic Afronandus – a taxon that thus far has never been included in any molecular study – as sistergroup to the remaining genera; (3) the monophyly of the Nandidae + Badidae and their inclusion into a larger monophyletic group – along with the Pristolepididae, Anabantoidei and Channoidei – comprising the Labyrinthici sensu Rosen & Patterson. We also review the morphological and molecular evidence for both the conflicting placement of Pristolepis and the putative sistergroup relationship between the labyrinth fishes (Anabantoidei) and snakeheads (Channoidei).     

Interrelationships and evolution of the tapeworms (Platyhelminthes: Cestoda)

Interrelationships of the tapeworms (Platyhelminthes: Cestoda) were examined by use of small (SSU) and large (LSU) subunit ribosomal DNA sequences and morphological characters. Fifty new complete SSU sequences were added to 21 sequences previously determined, and 71 new LSU (D1-D3) sequences were determined for the complementary set of taxa representing each of the major lineages of cestodes as currently understood. New sequences were determined for three amphilinidean taxa, but were removed from both alignments due to their excessively high degree of divergence from other cestode sequences. A morphological character matrix coded for supraspecific taxa was constructed by the modification of matrices from recently published studies. Maximum-parsimony (MP) analyses were performed on the LSU, SSU, LSU+SSU, and morphological data partitions, and minimum-evolution (ME) analyses utilizing a general time reversible model of nucleotide substitution including estimates of among-site rate heterogeneity were performed on the molecular data partitions. Resulting topologies were rooted at the node separating the Gyrocotylidea from the Eucestoda. The LSU data were found to be more informative than the SSU data and were more consistent with inferences from morphology, although nodal support was generally weak for most basal nodes. One class of transitions was found to be saturated for comparisons between the most distantly related taxa (gyrocotylideans vs cyclophyllideans and tetrabothriideans). Differences in the topologies resulting from MP and ME analyses were not statistically significant. Nonstrobilate orders formed the basal lineages of trees resulting from analysis of LSU data and morphology. Difossate orders were basal to tetrafossate orders, the latter of which formed a strongly supported clade. A clade including the orders Cyclophyllidea, Nippotaeniidea, and Tetrabothriidea was supported by all data partitions and methods of analysis. Paraphyly of the orders Pseudophyllidea, Tetraphyllidea, and Trypanorhyncha was consistent among the molecular data partitions. Inferences are made regarding a monozoic (nonsegmented) origin of the Eucestoda as represented by the Caryophyllidea and for the evolution of the strobilate and acetabulate/tetrafossate conditions having evolved in a stepwise pattern.     

Molecular phylogeny of the Forcipulatacea (Asteroidea: Echinodermata): systematics and biogeography

We present a comprehensively sampled three‐gene phylogeny of the monophyletic Forcipulatacea, one of three major lineages within the crown‐group Asteroidea. We present substantially more Southern Hemisphere and deep‐sea taxa than were sampled in previous molecular studies of this group. Morphologically distinct groups, such as the Brisingida and the Zoroasteridae, are upheld as monophyletic. Brisingida is supported as the derived sister group to the Asteriidae (restricted), rather than as a basal taxon. The Asteriidae is paraphyletic, and is broken up into the Stichasteridae and four primary asteriid clades: (1) a highly diverse boreal clade, containing members from the Arctic and sub‐Arctic in the Northern Hemisphere; (2) the genus Sclerasterias; (3) and (4) two sister clades that contain asteriids from the Antarctic and pantropical regions. The Stichasteridae, which was regarded as a synonym of the Asteriidae, is resurrected by our results, and represents the most diverse Southern Hemisphere forcipulatacean clade (although two deep‐sea stichasterid genera occur in the Northern Hemisphere). The Labidiasteridae is artificial, and should be synonymized into the Heliasteridae. The Pedicellasteridae is paraphyletic, with three separate clades containing pedicellasterid taxa emerging among the basal Forcipulatacea. Fossils and timing estimates from species‐level phylogeographic studies are consistent with prior phylogenetic hypotheses for the Forcipulatacea, suggesting diversification of basal taxa in the early Mesozoic, with some evidence for more widely distributed ranges from Cretacous taxa. Our analysis suggests a hypothesis of an older fauna present in the Antarctic during the Eocene, which was succeeded by a modern Antarctic fauna that is represented by the recently derived Antarctic Asteriidae and other forcipulatacean lineages. © 2011 The Linnean Society of London, Zoological Journal of the Linnean Society, 2011, 162 , 646–660.     

Dicyema shorti n. sp. (phylum Dicyemida) from Octopus burryi (Mollusca: Cephalopoda: Octopodidae) in the Gulf of Mexico

Nematogens and vermiform embryos of a new species of Dicyema are described from an octopus collected off Veracruz, Mexico. Dicyema shorti n. sp. is a small dicyemid species that rarely exceeds 500 microm in length. It is further characterized by the presence of 18 peripheral cells in the vermiform stages, a conical-shape calotte, and an axial cell that extends to the base of the propolar cells. Other stages in the life cycle of the parasite are not known. This is the first dicyemid to be described from Octopus burryi Voss. 1950, and also from both the southern Gulf of Mexico and the country of Mexico.     

Ethogram of Abdopus aculeatus (d'Orbigny, 1834) (Cephalopoda: Octopodidae): Can behavioural characters inform octopodid taxomony and systematics?

An ethogram is provided for the small, intertidal, diurnal octopusAbdopus aculeatus (d'Orbigny, 1834). Information is based primarilyon in situ observations of adults, and supplemented with photographsof animals in aquaria. Aspects of the dymantic display, matingsystem, activity patterns, and habitat use appear similar tothose expressed by other members of Abdopus, as well as thelarge sister taxon Octopus cyanea, suggesting that these behavioursmay be conserved throughout the evolution of these octopuses.Many skin components are also shared with Octopus bimaculoides,which may reflect either an evolutionary affinity with thisoctopus, or convergence in these characters. If behaviouralunits such as those documented here are compiled in a consistentmanner for other species, then they may facilitate taxonomicidentification, as well as future evolutionary studies of octopodids.