Quantifying the trophic base for benthic secondary production in the Nakdong River estuary of Korea using stable C and N isotopes

The overall dependence of benthic secondary production on the main primary producers at three different habitats in the Nakdong River estuarine system, Korea, was estimated. Inventories of macrobenthic invertebrate biomass were combined with multiple-isotope-mixing models to evaluate the trophic base, comparing Scirpus triqueter-dominated and Phragmites australis-dominated marshes and bare intertidal flat. The feasible contributions of four main food sources, marsh macrophytes, the microphytobenthos, and riverine and marine suspended particulate organic matter (RPOM and MPOM), to the consumer biomasses were calculated using the isotopic mixing model. After weighting the feasible contributions of food sources to each taxon by the consumer biomass, the resultant values were summed for all the consumers at each habitat to quantify the trophic base of the benthic invertebrate community. Dual-isotope-mixing model calculations verified the varying dependence on those potential food sources among the functional feeding groups. In addition, the dependence on each source of the same functional group varied between bare intertidal and salt-marsh habitats, shifting from a dominance of benthic and pelagic microalgal sources on the former habitat to a mixed food source at the latter habitat. The biomasses of the species comprising each functional group differed among habitats and sampling dates, so that each functional group made a different contribution to the whole benthic community and its basal food source. Given the calculation of the overall dependence of macrozoobenthic community on each food source, our results indicate that the microphytobenthic source dominates (nearly half) the trophic base in all the intertidal habitats of different vegetational compositions. Marsh-macrophyte-derived organic matter and RPOM served as considerable subsidies only to salt-marsh food webs, reflecting the use of the mixed food source by salt-marsh-bed consumers. Conversely, the dominance of MPOM in the total food base was equal to that of the microphytobenthos in the bare intertidal ecosystem but increased during spring−summer in the salt-marsh systems. Our results also suggest that the river discharge concentrated during the summer monsoon does not lead to any shift in trophic base for estuarine secondary production.     

The role of microphytobenthos on shallow coastal lagoons: a modelling approach

Ria Formosa is a Region of Restricted Exchange given its limited connection to coastal water circulation. Furthermore, it is subject to several anthropogenic activities that can lead to an increase in nutrients and potentially to eutrophication. Previous studies have shown the importance of the benthic compartment, specifically the microphytobenthos (MPB) in this shallow coastal lagoon. The dCSTT–MPB model [new version of the dynamic Comprehensive Studies Task Team (dCSTT) model] here described couples the benthic and pelagic compartments. Due to the shallowness of the system, the benthic microalgae are one of the most important primary producers of the system. Preliminary results of the model show a large biomass of benthic microalgae, which strongly influences the pelagic chlorophyll concentration by resuspension. However, algae concentrations in the water column are relatively small due to the high flushing rate of the lagoon. The MPB community is mainly supported by nutrients in the pore water. A sensitivity analysis (SA) has revealed that the factors associated with the benthic compartment were the most important and sensitive to changes. Porosity, benthic chlorophyll recycling, loss of MPB due to grazing and the yield of microphytobenthic chlorophyll from nitrogen were some of the most sensitive parameters, as well as the ones associated with decay of particulate organic nitrogen. The development of our dCSTT–MPB model has itself provided insights into benthic function.     

Mediation of benthic–pelagic coupling by microphytobenthos: an energy- and material-based model for initiation of blooms of Aureococcus anophagefferens

We present a conceptual model for initiation of blooms of the estuarine brown-tide pelagophyte Aureococcus anophagefferens. The model is based on the observation that in addition to its well-documented stimulation by organic nutrients, Aureococcus is pre-adapted to low light levels. Its relatively low maximum (light-saturated) growth rate makes it a poor competitor with other estuarine species at high light under acclimated conditions. Its large photosynthetic antenna and relatively low quota of photoprotective pigments make it more susceptible to photoinhibition than other species to which it is compared. These same characteristics give it a competitive advantage at low light levels. In its shallow habitat, both the light level and the rate of nutrient supply from groundwater and benthic porewater are determined by the degree of benthic coupling. Experimental manipulations in a microcosm and a survey of the literature demonstrate the ability of the sediment-associated microphytobenthos (MPB) to regulate both the light- and nutrient-environment in the overlying water column. The model predicts that the growth dynamics of the MPB are such that the benthic/water column interactions tend towards one of two stable states. In one, a well-developed population of MPB restricts resuspension of particulate material and efflux of dissolved nutrients, resulting in clear and nutrient-poor overlying waters. This condition does not favor growth of Aureococcus. In the alternative state, erosion of the MPB results in turbid, nutrient-rich waters that do favor bloom initiation. Alternation between the states is caused by external physical forcing, through wind-driven mixing of the water column. Field data from Quantuck Bay, New York (USA), failed to document the transition from non-bloom to bloom conditions. Even so, they are consistent with the model’s predictions.     

Linking Intertidal and Subtidal Food Webs: Consumer-Mediated Transport of Intertidal Benthic Microalgal Carbon

We examined stable carbon and nitrogen isotope ratios for a large variety of consumers in intertidal and subtidal habitats, and their potential primary food sources [i.e., microphytobenthos (MPB), phytoplankton, and Phragmites australis] in a coastal bay system, Yeoja Bay of Korea, to test the hypothesis that the transfer of intertidal MPB-derived organic carbon to the subtidal food web can be mediated by motile consumers. Compared to a narrow δ¹³C range (−18 to −16‰) of offshore consumers, a broad δ¹³C range (−18 to −12‰) of both intertidal and subtidal consumers indicated that ¹³C-enriched sources of organic matter are an important trophic source to coastal consumers. In the intertidal areas, δ¹³C of most consumers overlapped with or was ¹³C-enriched relative to MPB. Despite the scarcity of MPB in the subtidal, highly motile consumers in subtidal habitat had nearly identical δ¹³C range with many intertidal foragers (including crustaceans and fish), overlapping with the range of MPB. In contrast, δ¹³C values of many sedentary benthic invertebrates in the subtidal areas were similar to those of offshore consumers and more ¹³C-depleted than motile foragers, indicating high dependence on phytoplankton-derived carbon. The isotopic mixing model calculation confirms that the majority of motile consumers and also some of subtidal sedentary ones depend on intertidal MPB for more than a half of their tissue carbon. Finally, although further quantitative estimates are needed, these results suggest that direct foraging by motile consumers on intertidal areas, and thereby biological transport of MPB-derived organic carbon to the subtidal areas, may provide important trophic connection between intertidal production and the nearshore shallow subtidal food webs.     

The importance of benthic–pelagic coupling for marine ecosystem functioning in a changing world

Benthic–pelagic coupling is manifested as the exchange of energy, mass, or nutrients between benthic and pelagic habitats. It plays a prominent role in aquatic ecosystems, and it is crucial to functions from nutrient cycling to energy transfer in food webs. Coastal and estuarine ecosystem structure and function are strongly affected by anthropogenic pressures; however, there are large gaps in our understanding of the responses of inorganic nutrient and organic matter fluxes between benthic habitats and the water column. We illustrate the varied nature of physical and biological benthic–pelagic coupling processes and their potential sensitivity to three anthropogenic pressures – climate change, nutrient loading, and fishing – using the Baltic Sea as a case study and summarize current knowledge on the exchange of inorganic nutrients and organic material between habitats. Traditionally measured benthic–pelagic coupling processes (e.g., nutrient exchange and sedimentation of organic material) are to some extent quantifiable, but the magnitude and variability of biological processes are rarely assessed, preventing quantitative comparisons. Changing oxygen conditions will continue to have widespread effects on the processes that govern inorganic and organic matter exchange among habitats while climate change and nutrient load reductions may have large effects on organic matter sedimentation. Many biological processes (predation, bioturbation) are expected to be sensitive to anthropogenic drivers, but the outcomes for ecosystem function are largely unknown. We emphasize how improved empirical and experimental understanding of benthic–pelagic coupling processes and their variability are necessary to inform models that can quantify the feedbacks among processes and ecosystem responses to a changing world.     

Trophic interactions within the Ross Sea continental shelf ecosystem

The continental shelf of the Ross Sea is one of the Antarctic's most intensively studied regions. We review the available data on the region's physical characteristics (currents and ice concentrations) and their spatial variations, as well as components of the neritic food web, including lower and middle levels (phytoplankton, zooplankton, krill, fishes), the upper trophic levels (seals, penguins, pelagic birds, whales) and benthic fauna. A hypothetical food web is presented. Biotic interactions, such as the role of Euphausia crystallorophias and Pleuragramma antarcticum as grazers of lower levels and food for higher trophic levels, are suggested as being critical. The neritic food web contrasts dramatically with others in the Antarctic that appear to be structured around the keystone species Euphausia superba. Similarly, we suggest that benthic-pelagic coupling is stronger in the Ross Sea than in most other Antarctic regions. We also highlight many of the unknowns within the food web, and discuss the impacts of a changing Ross Sea habitat on the ecosystem.     

Dynamic simulation and steady-state analysis of a bentho-pelagic coupled ecosystem under different simulation scenarios

Trophic dynamic studies of aquatic ecosystem are usually based on either dynamic or state-state models of energy and material transfer, comprising of a few functional tropic levels such as phytoplankton, primary consumers and secondary consumers. However, though benthic components (and production) are important parts of an aquatic ecosystem, they are often omitted from such approaches.Considering this inadequacy of previous simulation approaches, the aim of the present study, is to investigate the effect of benthic components on overall system dynamics. The objectives of this study are (a) to develop and study a dynamic model for Kakinada bay to understand how benthic components interact with others under a fixed set of conditions, and to find the sensitive parameters for such a benthic-pelagic coupled system (b) to study the effects of different biomasses of benthic components via scenario analysis and (c) to identify the different equilibrium states that a benthic-pelagic coupled system such as Kakinada Bay may reach.On running the simulation for a period of 5000 days (∼10+ years), the system was not seen to reach any equilibrium state; however, all state variables considered in the model were seen to coexist even at the end of this period. While zooplankton was found to be the most sensitive state variable, parameters directly associated with benthic components were indicated to be the most sensitive. Microphytobenthos was negatively correlated with phytoplankton which was corroborated by results of the perturbation scenario analyses as well. Only one equilibrium state – microphytobenthos dominated steady state was found for Kakinada Bay system when certain parameters were slightly changed.     

Species identity, diversity and microbial carbon flow in reassembling macrobenthic communities

Intense disturbance may locally destroy patches of habitat and shape the landscape into a mosaic of reassembling communities. The development of ecosystem properties during such community reassembly is poorly understood. In intertidal bare sediments, trophic relations between microphytobenthos or heterotrophic bacteria and macrofauna invertebrates may guarantee fundamental ecosystem properties such as carbon flow through the food web. We studied the dynamic relation between reassembling macrofauna communities and such microbial carbon flow during recovery after severe disturbance. We deliberately induced prolonged hypoxia in winter and early summer and allowed recolonisation for periods of two and five months. Carbon flow was quantified from basal resources (microphytobenthos and bacteria) to intermediate consumers using ¹³C as a tracer. Within the period of study (5 months), microbial carbon flow fully recovered, although macrofauna diversity was still very low compared to the natural communities (ranging from 6 to 17 species). More than 90% of microbial carbon flow to macrofauna was due to the consumers that recolonised within two months. Two of these species were dominant contributors to microphytobenthos carbon transfer to fauna. Furthermore, at an early stage of reassembly, this ecosystem property was remarkably similar when disturbance took place at different times of the year (winter or early summer), although there were differences in assemblage composition and functional diversity. We conclude that species assemblages and ecosystem function developed relatively independently in this benthic system. We discuss which ecological factors may have caused such non-parallel development of macrofaunal communities and carbon flow.     

持久性有机污染物在水生食物网中的传递行为

食物网是持久性有机污染物(POPs)在水生生态系统中传递的重要途径,了解其传递行为与机制是POPs生态暴露风险评价的科学基础。从4个方面展开了讨论和分析:(1)食物网主要特征(营养级和食物链长度)与POPs环境行为的关系;(2)POPs在底栖及底栖-浮游耦合食物网中的环境行为;(3)微食物网对POPs环境行为的作用;(4)食物网的变化对POPs环境行为的影响。主要结论如下:(1)已有研究对水生生物中POPs生物放大作用存在较大争议。一般营养级越高,POPs生物富集性越强,但由于各种生态和生理性质的影响,也存在例外情况。食物链长度与POPs生物富集性呈正相关。(2)POPs通过底栖食物网将沉积物中的POPs向上传递,底栖-浮游食物网的耦合提高了高营养级消费者的暴露风险,目前就POPs在底栖食物网中的生物放大性是否大于浮游食物网存在争议。(3)微生物具有较大的比表面积,是吸附POPs的重要载体。另,沉积物中的微生物通过分解有机质,将POPs释放到水柱中。微生物降解也是环境中POPs脱离环境的重要途径。(4)在内、外压力下,食物网结构和功能发生变化,使物质和能量的传递方向和效率发生改变,并与环境理化性质的变化互相耦合,影响POPs的环境行为。当前研究的重点多集中在POPs在浮游食物网,尤其是高营养级浮游食物网中的环境行为,对POPs在底栖及底栖-浮游耦合食物网和微食物网中环境行为的研究相对缺乏。有关POPs在食物网中环境行为的研究多集中在食物网的某个部分,时间尺度较短,缺乏对POPs环境行为动态变化的研究,未来需深入开展多尺度和多角度的POPs在食物网中环境行为的动态变化研究。新型POPs的生产和使用量不断增加,但有关其在食物网中环境行为的相关分析还较为匮乏,需加强研究。     

富营养化对白洋淀底栖-浮游耦合食物网结构和功能的影响

国际湖沼学的长期研究发现,一个完整的湖泊生态系统应包括底栖食物网和浮游食物网,而营养条件变化会显著改变浅水湖泊中底栖-浮游食物网的结构和功能。为了明晰富营养化对浅水湖泊底栖-浮游耦合食物网结构和功能的影响,以浅水草型湖泊——白洋淀为研究区,运用野外监测和ECOSIM与ECOPATH(Ew E)模型相结合方法,构建白洋淀底栖-浮游耦合食物网的概念模型,模拟1982—2011年间富营养化对白洋淀底栖路径和浮游路径的结构和功能影响:(1)野外监测的结果表明,从1999年至今白洋淀一直处于富营养化状态;(2)Ew E模型模拟结果表明1982—2006年,总生物量呈下降趋势,下降比例达66.38%;能流路径从以底栖路径为主转变为以浮游路径为主;(3)运用Pearson相关分析,结果表明:浮游植物与TN(r=0.67,P0.01)和TP(r=0.37,P0.05)呈显著正相关,而底栖藻类和大型沉水植物与TN(r=0.77,P0.01;r=0.67,P0.01)和TP(r=0.54,P0.01;r=0.36,P0.05)呈显著负相关。富营养化是白洋淀底栖初级和次级生产力向浮游初级和次级生产力转变的主要驱动力。采用科学的方法准确评估富营养化对湖泊底栖-浮游耦合食物网结构和功能的影响,可为湖泊生态系统管理提供技术和方法支持。     

Lake morphometry predicts the degree of habitat coupling by a mobile predator

Habitat coupling is an ecosystem process whereby semi-discontinuous habitats are connected through the movement of energy and nutrients by chemical, physical or biological processes. One oft-cited example is that of littoral–pelagic coupling in lakes. Theory has argued that such habitat coupling may be critical to food web dynamics, yet there have been few empirical studies that have quantified ecological factors that affect the degree of habitat coupling in ecosystems. Specifically, the degree to which habitat coupling occurs across important physical gradients has largely been ignored. To address this, we investigate the degree of littoral habitat coupling (i.e. the degree to which a top predator lake trout, Salvelinus namaycush, derives energy from the littoral zone) along a gradient of lake shape, where lake shape modifies the relative quantity of coupled epilimnetic benthic and pelagic habitats within each lake. Herein we demonstrate that littoral habitat coupling is intensified in simple circular lakes compared to their reticulate counterparts in seven Canadian Shield lakes. Although the more reticulate lakes had larger areas of epilimnetic benthic habitat, littoral food sources comprised 11% compared to 24% of lake trout diet in reticulate and circular lakes, respectively. This heightened interaction in circular lakes also appears to translate into increased omnivory in more circular lakes compared to reticulate lakes such that lake trout of circular lakes have a significantly lower trophic position than lake trout of reticulate lakes (F_1,5=6.71 p=0.05). These results suggest that it is the accessibility of littoral production via thermal refugia, and not the amount of littoral production, that determines the degree to which lake trout couple littoral and pelagic habitats in lakes.     

Sediment Resuspension Effects on the Benthic Microbial Loop in Experimental Microcosms

Sediment resuspension induced by anthropogenic disturbance is becoming a major threat of marine coastal ecosystems worldwide. The effects of sediment resuspension on the pelagic domain and on macro- and meiobenthos are well documented in the literature, whereas the effects on the benthic microbial components are nearly neglected. We have investigated the effects of sediment resuspension at two different disturbance levels on benthic bacterial abundance, biomass, and activities and on heterotrophic nanobenthos abundance in experimental microcosms. The results of our experiments pointed out that, independently from the amount of involved energy, sediment resuspension determined a general decrease of all benthic microbial components. The main effects consisted of a decreased abundance of the metabolically active bacterial fraction and of heterotrophic nanobenthos abundance. However, the amount of energy involved in sediment resuspension had differential effects on the structure and functioning of the benthic microbial loop, but only in the short term (i.e., within 36 h). Sediment resuspension had a stimulatory effect on activities of surviving bacterial cells, which, in turn, resulted in increased sediment organic C turnover rates. We hypothesize that such an effect, enhancing nutrient availability, might have relevant consequences on the trophic state of coastal marine ecosystem.     

Close and delayed benthic–pelagic coupling in coastal ecosystems: the role of physical constraints

We aimed to analyse the temporal scales of the variability of benthic ammonium flux using data from an estuarine bay (Alfacs Bay, N. W. Mediterranean). Several nitrogen (N) pools in the sediment, their reactivities and their associated fluxes were estimated. Decomposition of labile buried N (4.5 mol N m^-2) was found to cause an ammonium flux of 0.1 mmol N m^-2 d ^-1, referred to as background flux. The fluxes measured from bell-jar incubations were usually higher, between 2 and 6 mmol N m^-2 d ^-1, which reflects mineralization of recent sedimentation. A typical sedimentation event was found to account for 25 – 75 mmol m^-2 of freshly settled N, which should bring on an ammonium flux of about 1.7–5.0 mmol N m^-2 d ^-1, referred to as fast flux. The concordance between measured and computed benthic fluxes is associated with the coupling of benthic fluxes to production and sedimentation. Close benthic–pelagic coupling was observed in winter and early spring, while a delayed flux response to sedimentation, with transient variations of pore water ammonium profiles, showing surface peaks and decreasing concentrations with depth, was found in autumn. Structures, such as viscous layers, which develop over the sediment–water interface, were found to be essential to the regulation of benthic processes and to lead to transient variations of pore water nutrient concentrations and associated fluxes. The temporal scales of the benthic flux response to sedimentation were discussed in terms of the physical structures involved in decomposition (the bulk sediment, the viscous layers or the fresh settled layer), the processes controlling kinetics and diffusion laws. Several scenarios for the benthic- pelagic coupling in Alfacs Bay, in which local (estuarine circulation) and climatic components combine to yield the variability observed, were examined.     

Trophic cul-de-sac, Pyrazus ebeninus, limits trophic transfer through an estuarine detritus-based food web

The importance to food‐webs of trophic cul‐de‐sacs, species that channel energy flow away from higher trophic levels, is seldom considered outside of the pelagic systems in which they were first identified. On intertidal mudflats, inputs of detritus from saltmarshes, macroalgae or microphytobenthos are generally regarded as a major structuring force underpinning food‐webs and there has been no consideration of trophic cul‐de‐sacs to date. A fully orthogonal three‐factor experiment manipulating the density of the abundant gastropod, Pyrazus ebeninus, detritus and macrobenthic predators on a Sydney mudflat revealed large deleterious effects of the gastropod, irrespective of detrital loading or the presence of predators. Two months after experimental manipulation, the standing‐stock of microphytobenthos in plots with high (44 per m²) densities of P. ebeninus was 20% less than in plots with low (4 per m²) densities. Increasing densities of P. ebeninus from low to high halved the abundance of macroinvertebrates and the average number of species. In contrast, the addition of detritus had differing effects on microphytobenthos (positively affected) and macroinvertebrates (negatively affected). Over the two‐months of our experiment, no predatory mortality of P. ebeninus was observed and high densities of P. ebeninus decreased impacts of predators on macroinvertebrate abundances. Given that the dynamics of southeast Australian mudflats are driven more by disturbance than seasonality in predators and their interactions with prey, it is likely that Pyrazus would be similarly resistant to predation and have negative effects on benthic assemblages at other times of the year, outside of our study period. Thus, in reducing microphytobenthos and the abundance and species richness of macrofauna, high abundances of the detritivore P. ebeninus may severely limit the flow of energy up the food chain to commercially‐important species. This study therefore suggests that trophic cul‐de‐sacs are not limited to the eutrophied pelagic systems in which they were first identified, but may exist in other systems as well.     

A revision of the genus Neoneuromus in China (Megaloptera: Corydalidae)

Lake Illawarra, is a typical shallow intertidal coastal barrier lagoon in New South Wales, Australia. This paper reports the first examination of photosynthetic characteristics of benthic microalgae and seagrass in this lake by measuring the oxygen exchange procedure (flux) using sediment-core incubations in the laboratory. Photosynthesis vs irradiance relationships (P–I curves) were generated from measurements made at nine irradiances for microphytobenthos (MPB) at five different water depths (sites) during September 2002. Maximum benthic gross primary production (GP_max) for MPB in this lake tended to decrease with the increasing water depth from Site 5 (about 0.2 m deep) to Site 1 (about 3.0 m deep), and was correlated with decreasing surface sediment Chl-a concentrations.     

Benthic–pelagic coupling in the population dynamics of the harmful cyanobacterium Microcystis

1. In eutrophic lakes, large amounts of the cyanobacterium Microcystis may overwinter in the sediment and re‐inoculate the water column in spring. 2. We monitored changes in pelagic and benthic populations of Microcystis in Lake Volkerak, The Netherlands. In addition, sedimentation rates and the rate of recruitment from the sediment were measured using traps. These data were used to model the coupling between the benthic and pelagic populations and to calculate the contribution of overwintering benthic and pelagic populations to the magnitude of the pelagic summer bloom. 3. Changes in the benthic Microcystis population showed a time lag of 3–14 weeks compared with the pelagic population. This time lag increased with lake depth. The largest amount of benthic Microcystis was found in the deepest parts of the lake. These observations suggest horizontal transport of sedimented Microcystis from shallow to deep parts of the lake. 4. Recruitment from and sedimentation to the sediment occurred throughout the year, with highest recruitment and sedimentation rates during summer. Model simulations indicate that the absence of benthic recruitment would reduce the summer bloom by 50%. 5. In spring, the total pelagic population was three to six times smaller than the total benthic population. Yet, model simulations predict that the absence of this small overwintering pelagic population would reduce the summer bloom by more than 64%. 6. Reduction of the overwintering pelagic populations, for instance by flushing, may be a useful management strategy to suppress or at least delay summer blooms of Microcystis.     

Benthic-Pelagic Coupling: Effects on Nematode Communities along Southern European Continental Margins

Along a west-to-east axis spanning the Galicia Bank region (Iberian margin) and the Mediterranean basin, a reduction in surface primary productivity and in seafloor flux of particulate organic carbon was mirrored in the in situ organic matter quantity and quality within the underlying deep-sea sediments at different water depths (1200, 1900 and 3000 m). Nematode standing stock (abundance and biomass) and genus and trophic composition were investigated to evaluate downward benthic-pelagic coupling. The longitudinal decline in seafloor particulate organic carbon flux was reflected by a reduction in benthic phytopigment concentrations and nematode standing stock. An exception was the station sampled at the Galicia Bank seamount, where despite the maximal particulate organic carbon flux estimate, we observed reduced pigment levels and nematode standing stock. The strong hydrodynamic forcing at this station was believed to be the main cause of the local decoupling between pelagic and benthic processes. Besides a longitudinal cline in nematode standing stock, we noticed a west-to-east gradient in nematode genus and feeding type composition (owing to an increasing importance of predatory/scavenging nematodes with longitude) governed by potential proxies for food availability (percentage of nitrogen, organic carbon, and total organic matter). Within-station variability in generic composition was elevated in sediments with lower phytopigment concentrations. Standing stock appeared to be regulated by sedimentation rates and benthic environmental variables, whereas genus composition covaried only with benthic environmental variables. The coupling between deep-sea nematode assemblages and surface water processes evidenced in the present study suggests that it is likely that climate change will affect the composition and function of deep-sea nematodes.     

Benthic-pelagic interactions in shallow water columns: an experimentalist's perspective

Shallow water column benthic and pelagic communities are thought to be linked by trophic relationships, through life history or ontogenetic links, and by biologically or physically-mediated resuspension or sedimentation processes. It is often confusing and sometimes misleading to focus only on benthic or only on pelagic components of aquatic food webs, even though the literature on shallow water column experiments contains few experiments that give a balanced view of these components, or interactions between components in different habitats. The rarity of balanced experiments is especially troublesome because the most common types of manipulations in shallow water column experiments (fish and nutrients) often have rapid, direct effects on both kinds of habitats, or easily recognized indirect links between the two habitats that go unevaluated. Despite a large experimental literature on pelagic and benthic foodwebs (with less on both in the same systems), there appears to be continuing uncertainty about the importance to pelagic productivity of nutrients released from resuspended sediments, the role of macrobenthos in controlling plankton, and the efficacy and interaction of trophic cascades between pelagic and benthic communities.     

Evidence of spatial and temporal changes in sources of organic matter in estuarine sediments: stable isotope and fatty acid analyses

We investigated spatial and temporal changes in sources of organic matter in sediments within an estuarine environment in South Africa using fatty acids (FA) and stable isotopes (SI). Samples of sediments and sources of organic matter [i.e., particulate organic matter, microphytobenthos (MPB), macrophytes, salt marsh plants, and terrestrial leaves] were collected during spring and summer 2012, and autumn and winter 2013 from the upper, middle, and lower reaches. A Stable Isotope Analysis in R (SIAR) mixing model was used to identify the organic matter sources contributing to sediments in each estuarine reach and season. We found that diatom-associated fatty acids (20:5ω3; 16:1ω7) increased toward the upper reaches, while long-chained terrigenous fatty acids (24:0) tended to be more prevalent in lower reach sediments. In support of the FA results, the SI mixing model showed a substantial contribution from the marsh grass Spartina maritima in sediments of the lower estuary during periods of low-freshwater discharge (autumn and winter), while MPB was the main component in sediments from the upper and middle reaches during all seasons. Our results have implications for evaluating estuarine food webs since the spatial and seasonal variability in the organic matter deposited can influence estuarine community structure.