Temporal and Spatial Habitats of Anadromous Brook Charr in the Laval River and its Estuary

Anadromy in brook charr occurs across the species’ range, but few studies have examined contiguous seasonal movements and habitat utilization of freshwater and estuarine environments. We used acoustic telemetry to track movements of anadromous brook charr for 1 year in the Laval River, Quebec. Fish entered the marine environment in May and June, inhabited shallow (<1.7 m), near-shore areas (<500 m from shore), and rarely ventured beyond the headlands of the bay. They were found where salinities were 1–34 ppt and temperatures 5–18°C. There was a strong tidal periodicity to observed movements with fish running up into bays as they became inundated at high tide and then returning to deep river channels in the bays at low tide. Between late July and early September, the charr returned to freshwater and spawned in the middle and upper sections of the river in October and November. Winter habitats were dispersed over 22 km of the river including two lakes. These detailed observations are an important contribution to our understanding of the evolutionary significance of anadromy in this species. The salinity and temperature co-tolerance provides insights into the species’ post-glacial dispersal, present-day distribution, and potential habitat maps for conservation, restoration, and enhancement programmes.     

Individual variations in habitat use and morphology in brook charr

The specific objectives of this study were to determine if there is individual specialization in habitat use by lacustrine brook charr Salvelinus fontinalis and if so, if specialization is related to fish morphology. Localizations of 28 brook charr equipped with thermosensitive radiotransmitters were recorded during three summers (1991, 1992, and 1993) in two lakes of the Mastigouche Reserve (Québec, Canada). Fifty per cent of the fish were found mainly in the benthic zone (hereafter benthic individuals), 18% in the pelagic zone (pelagic individuals), and 32% travelled regularly between the two zones (generalist individuals). The observed interindividual differences in habitat preference were related to differences in body morphology and coloration: (i) the pectoral fins of benthic and generalist individuals were significantly longer than those of pelagic ones; and (ii) the coloration of the lower flank of benthic and generalist individuals was silver-grey while that of pelagic individuals was red. The results of this study suggest that brook charr inhabiting oligotrophic lakes of the Canadian Shield exhibit trophic polymorphisms, where some individuals are specialists better adapted to feeding in the littoral zone whereas others are specialists better adapted to feeding in the pelagic zone. The potential for reproductive isolation between the two morphs is discussed.     

Growth and Dietary Niche in Salvelinus Alpinus and Salvelinus Fontinalis as Revealed by Stable Isotope Analysis

Arctic charr, Salvelinus alpinus, and brook charr, Salvelinus fontinalis, inhabiting three lakes in the de la Trinité River and adjacent watershed, north shore, Gulf of St. Lawrence, were sampled in 1998. Arctic charr growth differed among lakes with the smallest fish coming from the largest lake. Arctic charr weight–length equation exponents were almost identical at all sample sites. Brook charr growth was also similar in all lakes. July stomach samples from Arctic charr consisted almost entirely of cladocerans in the largest lake, less so in the intermediate sized lake and were mostly aquatic insects in the smallest lake. Brook charr stomach contents were more varied and included fish. Carbon, nitrogen and sulphur stable isotope analyses (SIA) were used to provide a spatially and temporally integrated image of charr diets. SIA corroborated observed among-lake differences and similarities in species diets and suggested lake morphometry may influence measured results. The ¹⁵N signature in brook charr muscle increased with fork-length, as a result of a shift towards piscivory with size. The ¹⁵N signature in Arctic charr muscle tissue showed a significant negative correlation with fork-length in two of the studied lakes that appears related to dietary niche shifts. Results demonstrate the ability of SIA to detect dietary shifts otherwise unobservable from standard gut content analysis.     

Diel locomotor activity of brook charr, as determined by radiotelemetry

Locations by radiotelemetry during eight 24–h sampling periods in 1991, 1992, and 1993 were used to evaluate the diel activity patterns of adult brook charr Salvelinus fontinalis in two lakes of the Laurentian Shield (Québec, Canada). Based on the minimum distance travelled between two consecutive locations, adult brook charr were more active at dusk and at night than during the day. During daylight periods, individual fish displayed strong site selection, remaining in the same area along the shore from day to day. The fish left their inshore position at dusk, were highly mobile during the night, and returned to their focal point at sunrise, exhibiting diel homing behaviour. These results are supported by an increase in gillnet captures of adult brook charr in Lac Melchior at night. Data obtained by gillnet fishing in lakes Bondi and Simpson showed that juvenile (1+) brook charr were active throughout the diel cycle and that young-of-the-year were active mainly during the day, suggesting that there is an ontogenetic change in the diel activity of brook charr. Despite its limitations (restrictions on the number and size of tracked individuals, post-manipulation mortality, lifetime of transmitter battery), radiotelemetry allows for collection of multiple behavioural observations (distances travelled, instantaneous activity, site selection and homing) during the activity cycle of individual fish, and thus provides a finer degree of spatial resolution than alternative methods such as gillnetting.     

Microhabitat Preference of Egernia napoleonis in Undisturbed Jarrah Forest,and Availability and Introduction of Microhabitats to Encourage Colonization of Restored Forest

An animal's microhabitat requirements can impact its ability to colonize restored areas, particularly species requiring slow developing microhabitats, such as logs and woody debris piles. Introduction of these microhabitats may be required to facilitate colonization by some species. Restored bauxite mine‐pits in the Jarrah (Eucalyptus marginata) forest of south‐western Australia contain introduced log piles at densities of 1 ha^?1. However, these have not facilitated colonization by Napoleon's skink (Egernia napoleonis), which rely on logs for habitat and are largely absent from restored sites. We radio‐tracked 12 skinks in unmined forest to determine their microhabitat preferences and examined differences in vegetation structure, and microhabitat and food availability, between restored and unmined forests to identify reasons for their absence. Restored and unmined forests differed in canopy, mid‐ and understory cover and ground substrates, which were all potential barriers to colonization. Food availability was similar between restored and unmined forest, thus not a barrier to colonization. Skinks primarily utilized long logs, large woody debris piles, and large trees; microhabitats that were scarce or absent in restored sites and, therefore, potential barriers to colonization. Using this information, we introduced small woody debris piles into restored sites in close proximity to unmined areas containing skinks to facilitate skink colonization. This showed early signs of success and suggested that the lack of logs and woody debris were barriers to colonization. However, further monitoring is required to accurately determine the long‐term value of woody debris piles in facilitating skink colonization.     

Effects of Large Woody Debris Addition on Stream Habitat and Brook Trout Populations in Appalachian Streams

Large woody debris (LWD) was added to eight streams in the central Appalachians of West Virginia to determine if stream habitat could be enhanced and brook trout (Salvelinus fontinalis) populations increased. Brook trout populations were assessed one year prior to habitat manipulation and 3 years post-habitat manipulation. LWD was added by felling approximately 15 trees per 300 m stream reach. Four of the streams had LWD added to one 300 m reach with 300 m unmanipulated reaches upstream and downstream of the manipulated reach to observe within-stream effects of LWD additions on brook trout density. The remaining four streams had LWD added to three 300 m reaches and these streams were compared to those with only a single 300 m manipulated reach to observe the effects of the extent of habitat manipulation on brook trout density. New pools were formed by the addition of LWD, but overall pool area did not increase significantly in reaches where LWD was added. The relatively high gradient and coarse substrate of these streams may have precluded the added LWD from having a significant influence on stream channel morphology and habitat complexity. No pools were formed in the highest gradient stream, while the stream with the most pools formed had the lowest gradient. Brook trout populations fluctuated following habitat manipulations, and there was no overall effect of the LWD additions on within-stream variability in brook trout density. When there were significant differences among-streams with different extents of LWD additions, those streams receiving LWD additions over a large extent had the greatest brook trout densities. The full potential of added LWD to change stream habitat and influence on brook trout populations may take more time to develop than the 3 years post-manipulation period of this study.     

Assessment of the Feasibility of Preventing Reproduction of Lake Charr, Salvelinus Namaycush, in Shallow Areas of Reservoirs Affected by Drawdowns

Lake charr, Salvelinus namaycush, spawn almost exclusively in lakes, in the fall. Spawning sites in inland lakes are generally located close to the shore in areas with coarse-textured substrate, and in depths of less than 2m. Because of the type of water management system applied in reservoirs where water levels are lowered during the winter, eggs deposited during the fall around the shallow shoreline of reservoirs can be exposed. The depth of spawning sites relative to drawdowns may be a limiting factor for lake charr survival in reservoirs. In 1995 and 1996, we evaluated the ability to induce lake charr reproduction in deeper water, below the range of fluctuating water levels by the sequential construction of artificial reefs and limiting access to natural spawning habitat. The creation of artificial deeper water spawning areas, adjacent to natural sites, produced a partial transfer of reproduction. However when natural spawning sites were covered with tarpaulins almost all the eggs were laid in the artificial deeper water spawning areas. Complete or partial transfer of reproduction activities to sites below the depth not affected by water level fluctuations is therefore a potential way of alleviating the effects of hydroelectric reservoir management.     

Comparison of brook trout reproductive success and recruitment in an acidic adirondack lake following whole lake liming and watershed liming

Limestone applications to the catchment of one tributary to Woods Lake were highly effective in reducing stream acidity and stabilizing seasonal fluctuations in pH. The resulting improvement in stream water quality also led to a dramatic shift in reproductive strategy of the Woods Lake brook trout population. Prior to catchment liming, brook trout in Woods Lake were restricted to spawning on poor quality near shore substrate with limited ground water seepage. Reproductive success was limited by high mortality of eggs and larvae and recruitment from in lake spawning was not successful. Spawning brook trout did not utilize the tributary for spawning prior to watershed liming. Mitigation of acidity in the tributary, by catchment liming, effectively extended the spawning habitat available to the Woods Lake brook trout population and one year following treatment brook trout spawned successfully in the tributary for the first time in 6 years of observation. Significant recruitment of young trout into the lake population occurred from 1991 through 1993, although the absolute number of fish captured was relatively small. In the fall of 1993, four year classes of naturally spawned brook trout were present in the lake. Although reproductive success was enhanced by improving tributary spawning habitat in the Woods Lake basin, self maintenance of the population may be limited by low recruitment rates of young trout, due to high levels of summer mortality resulting from predation. Mitigation of this constraint would require substantially higher levels of fry production than were observed in Woods Lake and/or enhanced refugia for young trout. The results of this experiment suggest that re-establishment of tributary spawning populations of brook trout may be possible, with future reductions in acidic deposition, in acidic Adirondack lakes with limited in-lake spawning habitat.     

Pyloric caecal morphology of brook charr,Salvelinus fontinalis,in relation to diet

Synopsis Brook charr, Salvelinus fontinalis, shifts its diet from zoobenthos to pelagic prey when living sympatrically with white sucker, Catostomus commersoni, in lakes of the Laurentian Shield. We tested the hypothesis that this diet difference would have a significant impact on their pyloric caecal morphology in 5 lakes containing allopatric brook charr populations and 6 other lakes containing both brook charr and white sucker. We observed that the mean length of the most posterior caecum of charr was significantly greater in sympatry than in allopatry (X ± 1 SD: 9.91 ± 1.12 mm versus 8.44 ± 0.67 mm). This is equivalent to an increase of 18% of total pyloric caecal mass (dry weight) in sympatric brook charr. These results indicate that this response to differences in diet, well known in birds, also occurs in fish.     

Trophic polymorphism in brook charr revealed by diet, parasites and morphometrics

Stomach contents, parasite assemblages and morphometrics were compared in brook charr Salvelinus fontinalis from the littoral and pelagic zone of two adjacent lakes on the Canadian Shield. In lac Baie des Onze Îles, fish from the littoral zone had greater abundance of benthic prey in their stomach and were more heavily infected by parasites that use intermediate hosts associated with the littoral zone than fish captured in the pelagic zone. Littoral and pelagic brook charr from this lake also differed in regard to body shape and fin length, with each group being anatomically adapted to exploit their respective habitats. The highly significant correlation between morphometric and parasite canonical scores supports the hypothesis of functional diversification of individuals within lac Baie des Onze Îles. While fish from littoral and pelagic zones of lac Caribou did not differ in terms of diet, parasite assemblages or morphometrics, they were different to fish from lac Baie des Onze Îles in that they were less frequently infected with parasites that use gastropods as intermediate hosts, and had shorter pectoral fins. The inter-lake comparisons suggested that parasite assemblages and morphometrics of brook charr reflected the dominance of the limnetic and littoral habitats in lacs Caribou and lac Baie des Onze Îles, respectively.     

Diel Habitat Partitioning by Bull Charr and Cutthroat Trout During Fall and Winter in Rocky Mountain Streams

We used underwater observation to determine diel habitat partitioning between bull charr, Salvelinus confluentus, and cutthroat trout, Oncorhynchus clarki, during fall and winter (0.1–8.3°C) in two Rocky Mountain streams that differed in habitat availability. The majority (>70%) of both species emerged from concealment cover at night, though bull charr exhibited a greater tendency for nocturnal behavior than cutthroat trout. Differences in day and night counts were most pronounced at temperatures <3°C, when very few fish of either species were observed in the water column during the day, but both species were common at night. Both species used concealment cover of large woody debris and boulder substrate crevices in deep pools during the day. At night, fish emerged from cover and habitat use shifted to shallow water with low cover. Microhabitat partitioning among species and size classes occurred at night, cutthroat trout moving into shallower, faster water that was farther from cover compared to bull charr. Smaller fish of both species occupied focal positions in slower, shallower water closer to the substrate than larger fish. Large, mixed-species aggregations also were common in beaver ponds both day and night. High variation in diel and site-specific winter habitat use suggests the need for caution in developing habitat suitability criteria for salmonids based solely on daytime observations or on observations from a few sites. Our results support the need to incorporate nocturnal habitat use and partitioning in studies of salmonid ecology.     

An examination of the post-planting success of hatchery brook charr possessing different mitochondrial DNA haplotypes

Previous mtDNA and allozyme studies of brook charr Salvelinus fontinalis from northern Ontario lakes that had been extensively stocked with a government hatchery strain, yielded results that were incongruous with a neutral theory of selection in the mtDNA genome. A single haplotype (haplotype 1) predominated in all the fish sampled from these lakes, which is consistent with the observed distribution of this haplotype in northern portions of the species range. However, haplotype 1 does not occur in a high frequency within the hatchery strain. In a direct survivorship experiment, of 1500 fish stocked into an Ontario lake in the spring of 1994 containing a native population of brook charr, no significant differences between stocking and recapture mtDNA distributions were observed in the summer of 1994. However, a survey of young of the year in the following spring did not reveal the presence of any 'private' hatchery haplotypes. Significant differences in the distribution of mtDNA haplotypes were observed in two stocked lakes compared to those in the putative source hatchery strain. Haplotype 1 predominated in both these stocked lakes, suggesting that fish with this haplotype possessed increased survivorship.     

Hydrography and population genetic structure in brook charr (Salvelinus fontinalis, Mitchill) from eastern Canada

Despite the abundance of studies of genetic diversity in freshwater fishes, few have specifically addressed the role of habitat structure in partitioning genetic variance within and among populations. In this study, we analysed the variability of six microsatellite loci among 24 brook charr population samples in order to correlate hydrographic structure with genetic organization. These populations originated from three Canadian National parks (Kouchibouguac, Fundy and Forillon) that showed distinct hydrographic structure. Considering the general characteristics of these habitats, we formulated specific hypotheses in regard to genetic structure, which were principally based on the potential for gene flow and population size associated with each habitat. The hierarchical analysis of molecular variance and the genetic distances computed among populations revealed that habitat structure analyses constitute an important, but insufficient, predictor of genetic structure. We discuss the importance of habitat complexity on genetic structure in the context of management and conservation.     

Habitat selection and survival of Common Goldeneye (Bucephala clangula) broods — preliminary results

Factors affecting habitat selection and survival of individual Common Goldeneye (Bucephala clangula) broods were studied. Females were marked with radio transmitters and coloured wing tags, and their movements and that of their broods were followed to investigate the pattern of lake use.Broods frequently left hatching lakes and moved varying distances and made overland travels to reach actual brood rearing lakes. Food was more abundant and pH lower in rearing lakes compared with hatching lakes. Rearing lakes also were smaller and more isolated than hatching lakes but did not differ with respect to the structure of shore vegetation.Mortality rate varied considerably between broods. However, total distance moved and the length of overland travel was not associated with increased duckling mortality. Neither was mortality associated with the size, isolation or vegetation structure of the rearing lakes.     

Eulittoral macroinvertebrate communities of lowland lakes: discrimination among trophic states

1. Nutrient inputs from urban and agricultural land use often result in shifts in species composition of pelagic and profundal invertebrate communities. Here, we test if nutrient enrichment affects the composition of eulittoral macroinvertebrate communities, and, if so, if macroinvertebrate communities of five different habitat types reflect differences in trophic state. 2. Macroinvertebrate community composition of 36 lakes was significantly correlated with total phosphorus (TP) concentration, the proportion of coarse woody debris (CWD) and root habitats and the proportion of grassland. 3. However, macroinvertebrate communities of five major habitat types from eight lakes were more dissimilar among habitats than among trophic states. Community composition of reed and stone habitats was significantly correlated with wind exposure but not TP concentration, while macroinvertebrate composition of sand habitats was related to TP concentration and coarse sediments. In CWD and root habitats, both TP concentration and a predominance of invasive species covaried, which made it difficult to relate the observed compositional differences to either trophic state or to the effects of competition between native and invasive species. 4. Trophic state influenced the composition of eulittoral macroinvertebrate communities but to a lesser extent than has been previously reported for profundal habitats. Moreover, the effects of trophic state were nested within habitat type and were partially superseded by biotic interactions and small‐scaled habitat complexity. Although eulittoral macroinvertebrate communities were not strong indicators of the trophic state of lowland lakes, they may be used to assess other anthropogenic impacts on lakeshores.     

Heterozygote deficiencies in small lacustrine populations of brook charr Salvelinus Fontinalis Mitchill (Pisces,Salmonidae): a test of alternative hypotheses

Empirical studies of natural populations have commonly reported departures from Hardy-Weinberg expected proportions of heterozygote individuals. Recent advances in statistical population genetics now offer the potential to exploit individual multilocus genotypic information to test more rigorously for possible sources of heterozygote deficiencies. In a previous study in lacustrine brook charr (Salvelinus fontinalis), we reported stronger deficits in small than in large lakes. In the present paper, we propose a methodology for empirically testing alternative hypotheses to identify the cause of the deficits observed in three of the smallest lakes (85, 109 and 182 ha) analysed. First, as in several salmonid species, brook charr may exhibit a trophic polymorphism in north temperate lakes. If morphs are genetically divergent, indiscriminate sampling of both forms would result in less heterozygote individuals than expected in a randomly mating population (Wahlund effect). Using an individual-based method aiming at detecting cryptic population structure, we can reject this explanation as the sole source of deficits for all three lakes. Secondly, mating among relatives could also be frequent in small lakes and lead to heterozygote deficiencies. Significantly more fish than expected at random had low individual multilocus heterozygosity in two of the lakes, suggesting that inbred fish may have been present. Thirdly, sampling of genetically related fish would also lead to departures from Hardy-Weinberg proportions. In the same two lakes, the distribution of pairwise relatedness coefficients departed from its random expectation, suggesting that non-random sampling of kin may have occurred.     

Phenotypic responses of lacustrine brook charr in relation to the intensity of interspecific competition

We investigated the structure of interindividual variations in the diet of brook charr (Salvelinus fontinalis) based on stomach contents data of 3776 charr captured in 69 lakes of the Canadian Shield (Québec, Canada); 29 of these contained allopatric brook charr populations, 24 contained brook charr and creek chub (Semotilus atromaculatus) and 16 contained brook charr and white sucker (Catostomus commersoni). In any given lake, some of the charr fed almost exclusively on benthic organisms (benthic specialists, i.e., mean percent weight of benthic prey >90%), others, almost exclusively on pelagic prey (pelagic specialists, i.e., mean percent weight of benthic prey <10%), and a lesser proportion were generalist feeders (i.e. mean percent weight of benthic prey between 10 and 90%). The proportion of benthic and pelagic specialists were respectively 41.3 and 18% in allopatric brook charr populations. These proportions fit remarkably well with those based on interindividual preferences in spatial distribution, identified through radio-telemetry in another study done in two lakes of the same area. The proportion of benthic specialists was related to competition for benthic organisms with creek chub and white sucker. The effect of white sucker on brook charr diet was more pronounced than that of creek chub: the proportion of benthic specialists among brook charr decreased from 41.3% in allopatry to 19.7% in sympatry with creek chub, and to 9.9% in sympatry with white sucker. Other response variables of brook charr populations also indicate that white sucker is a stronger competitor than creek chub in this system. Because sucker and chub were introduced in these lakes during the last century, phenotypic responses of brook charr to interspecific competition appear to be rapid. Furthermore, in addition to providing a strong field support to the current hypothesis that polymorphism is promoted by arelaxation of interspecific competition, our results also indicate that phenotypic response of brook charr (i.e. the proportion of each form in a given lake) is related to the intensity of this competition.     

The influence of groundwater withdrawal and land use changes on brook charr (<Emphasis Type="Italic">Salvelinus fontinalis</Emphasis>) thermal habitat in two coldwater tributaries in Michigan,U.S.A.

Brook charr (Salvelinus fontinalis) is a sentinel fish species which requires clean, cold water habitats. As such, many jurisdictions in the United States where brook charr are present use this species as an indicator of ecosystem health. In Michigan, groundwater-dominated streams are currently being impacted by increased groundwater withdrawal and land use/land cover changes which alter stream temperatures and their flow, and thus have the potential to significantly influence brook charr production and behavior. We quantified the influence of groundwater withdrawal and land use alteration on thermal habitat availability for brook charr using a groundwater modeling tool that estimated changes in baseflow to a stream segment based on changes to the groundwater system due to groundwater withdrawal and changes in rates of recharge related to landscape changes within a watershed. Projected stream temperature changes were calculated using a stream temperature modeling tool and compared to the range of temperature preferenda for brook charr in order to evaluate the potential impact of policy decisions regarding water extraction and land use/cover changes. The models predicted relatively small changes in both stream baseflow and consequently, stream temperature, with increased groundwater withdrawal rates. Land use/land cover alterations which we analyzed were shown to either mitigate or enhance the loss of brook charr thermal habitat as a result of groundwater withdrawal, depending on its relationship to recharge dynamics. This study emphasizes the importance of collaboration between water, land, and fisheries managers to ensure brook charr population viability, productivity, and sustainability in the face of environmental change, increasing water use and development in the watershed.     

Habitat use and fish activity of landlocked Atlantic salmon and brook charr in a newly developed habitat compensation facility

Degradation and destruction of valuable spawning and rearing habitat due to anthropogenic changes (e.g., flow modification and channelisation) is known to have dramatic impacts on fish populations. To compensate for habitat losses due to hydropower development, an artificial fluvial habitat channel (‘Compensation Creek’) was constructed in south-central Newfoundland, Canada. The creek was designed to include appropriate habitat features for the two dominant salmonid fish species, landlocked Atlantic salmon (Salmo salar L.) and brook charr (Salvenius fontinalis Mitchell). The study examines the habitat use of landlocked Atlantic salmon and brook charr in the Compensation Creek using electromyogram (EMG) radio telemetry. Ten landlocked Atlantic salmon and eight brook charr were captured and tagged with EMG transmitters. In laboratory swimming experiments, the EMG values were calibrated against swimming speed. Fish were then released in the Compensation Creek and tracked on a daily basis. The results show that (1) during residence in the creek, both species used preferentially the habitat features designed to match their rearing habitat preferences, and (2) swimming speed did not vary among habitat types for either species.