金沙江干热河谷(元谋段)丛枝菌根真菌多样性研究

从金沙江干热河谷(元谋段)75种植物的根际土壤中分离鉴定了44种丛枝菌根真菌, 分属无梗囊霉属Acaulospora、古孢霉属Archaeospora、内养囊霉属Entrophospora、巨孢囊霉属Gigaspora、球囊霉属Glomus和盾巨孢囊霉属Scutellospora, 其中,球囊霉属和无梗囊霉属为金沙江干热河谷中丛枝菌根真菌的优势属。齿状无梗囊霉A. denticulata、刺状无梗囊霉A. spinosa、瘤状无梗囊A. tuberculata,近明球囊霉Glomus claroideum、明球囊霉G. clarum、根内球囊霉G. intraradices、单孢球囊霉G. monosporum、弯丝球囊霉G. sinuosa是金沙江干热河谷(元谋段)的优势种。金沙江干热河谷土壤中丛枝菌根真菌的孢子密度为5~6400个/100g土壤,平均1504;每个根际土壤中丛枝菌根真菌的物种丰富度1~18种,平均9种。     

金沙江干热河谷(元谋段)丛枝菌根真菌多样性研究*

从金沙江干热河谷(元谋段)75种植物的根际土壤中分离鉴定了44种丛枝菌根真菌, 分属无梗囊霉属Acaulospora、古孢霉属Archaeospora、内养囊霉属Entrophospora、巨孢囊霉属Gigaspora、球囊霉属Glomus和盾巨孢囊霉属Scutellospora, 其中,球囊霉属和无梗囊霉属为金沙江干热河谷中丛枝菌根真菌的优势属。齿状无梗囊霉A. denticulata、刺状无梗囊霉A. spinosa、瘤状无梗囊A. tuberculata,近明球囊霉Glomus claroideum、明球囊霉G. clarum、根内球囊霉G. intraradices、单孢球囊霉G. monosporum、弯丝球囊霉G. sinuosa是金沙江干热河谷(元谋段)的优势种。金沙江干热河谷土壤中丛枝菌根真菌的孢子密度为5~6400个/100g土壤,平均1504;每个根际土壤中丛枝菌根真菌的物种丰富度1~18种,平均9种。     

金沙江干热河谷（元谋段）丛枝菌根真菌多样性研究

从金沙江干热河谷(元谋段)75种植物的根际土壤中分离鉴定了44种丛枝菌根真菌,分属无梗囊霉属Acaulospora、古孢霉属Archaeospora、内养囊霉属Entrophospora、巨孢囊霉属Gigaspora、球囊霉属Glomus和盾巨孢囊霉属Scutellospora,其中,球囊霉属和无梗囊霉属为金沙江干热河谷中丛枝菌根真菌的优势属。齿状无梗囊霉A．denticulata、刺状无梗囊霉A．spinosa、瘤状无梗囊A．tuberculata,近明球囊霉Glomus claroideum、明球囊霉G．clarum、根内球囊霉G．intraradices、单孢球囊霉Gmonosporum、弯丝球囊霉G．sinuosa是金沙江干热河谷(元谋段)的优势种。金沙江干热河谷土壤中丛枝菌根真菌的孢子密度为5-6400个／100g土壤,平均1504;每个根际土壤中丛枝菌根真菌的物种丰富度1～18种,平均9种。     

黄河源头地区土壤中的暗色丝孢真菌Ⅰ

从黄河源头下游8县区采集的24份土壤样品中分离得到19属34种暗色丝孢真菌,其中长孢齿梗孢Scolecobasidium longisporum和戈壁维罗纳霉Veronaea gobica为两个新种,芦竹节菱孢Arthrinium arundinis为一个新组合名称,并对灰色瓶霉Phialophora cinerescens进行了补充描述。对该地区31个中国已知种亦作了标本引证。所研究真菌的干制培养物及活菌种保存在山东农业大学植物病理学标本室(HSAUP)。     

中国土壤中粘鞭霉属的3个新种

报道了分离自中国土壤中的丝孢纲粘鞭霉属3个新种:短梗粘鞭霉Gliomastix brachypodi、瘤孢粘鞭霉G. tuberculatum及浅绿粘鞭霉G. virescens。对新种与各自相似种的区别进行了详尽讨论。新种的模式标本(干制培养物)保藏于山东农业大学植物病理学标本室(HSAUP),等模式标本(干制培养物)存放在中国科学院真菌标本馆(HMAS)。     

辽宁省土壤中暗色丝孢菌初查

从辽宁省不同生态环境中采集土壤样品28份,采用土壤平板法和稀释平板法,从中分离出45个暗色丝孢菌分离物。经鉴定分属于18属,26种。其中,海芋平脐蠕孢Bipolaris alocasiae、长梗腐质霉Humicola longistipes为新种;其他24种为国内已知种。研究过的标本（干制培养物）及活菌种保存在山东农业大学植物病理学标本室（HSAUP）,等模式标本保存在中国科学院真菌标本馆（HMAS）。     

西藏高原针茅草地土壤因子对丛枝菌根真菌物种多样性的影响

在对西藏高原北部针茅草地根围土壤中的丛枝菌根(AM)真菌种类分离鉴定基础上,研究了藏北针茅草地的土壤质地、pH、有机质和有效磷含量对AM真菌孢子密度、分离频度、相对多度、重要值、物种多样性指数和均匀度的影响.结果表明: 针茅草地根围土壤中共分离鉴定出AM真菌3属15种,其中,球囊霉属9种、无梗囊霉属6种、盾巨孢囊霉属1种.球囊霉属和无梗囊霉属为藏北针茅草地AM真菌的优势属;近明球囊霉和光壁无梗囊霉为藏北高寒草原针茅属植物根围AM真菌的优势种.不同质地土壤中AM真菌孢子密度、分离频度、相对多度和重要值均表现出球囊霉属＞无梗囊霉属＞盾巨孢囊霉属的趋势;土壤pH值对AM真菌种群组成无明显影响,球囊霉属和无梗囊霉属真菌分离频度、相对多度和重要值随土壤pH升高而增加,盾巨孢囊霉属则呈现相反趋势;不同土壤有机质含量范围内,AM真菌孢子密度等各项指标均呈球囊霉属＞无梗囊霉属＞盾巨孢囊霉属,而AM真菌属的分布没有明显规律;土壤有效磷含量对AM真菌种丰度和孢子密度影响较小.研究区域内AM真菌物种多样性指数和均匀度随着土壤有效磷含量升高而增加.     

海南省土壤中的暗色丝孢菌Ⅰ

从海南省不同生境中采集土壤样品48份,采用土壤平板法和稀释法,从中分离出61个暗色丝孢菌分离物,经鉴定分属于21属中的35种。其中,多变粘鞭霉Gliomastix variabilis和枝梗假葡萄孢Pseudobotrytis ramosa为新种;螺旋丝头束霉Cephalotrichum heliciforme为一新名称;疹梗孢属Ardhachandra和脊孢疹梗孢A. cristaspora及淡褐节球孢Nodulisporium hinnuleum为中国新记录。模式和所有研究过的其他标本（干制培养物）及活菌种保存在山东农业大学植物病理学标本室（HSAUP）,等模式标本（干制培养物）存放在中国科学院菌物标本馆（HMAS）。     

四川省土壤中的暗色丝孢菌

采用土壤平板法和稀释平板法,从采自四川省的24份土壤样品中,分离得到27个暗色丝孢菌分离物,隶属于16属24种。其中,浅色葡萄穗霉Stachybotrys pallescens为一新种,绿色暗梗单孢霉原变种Chloridium virescens var.virescens,大孢树粉孢原变种Oidiodendron maius var.maius和二色葡萄穗霉Stachybotrys dichroa为中国新记录。对新种及中国新记录作了较详细的描述并绘图。其余20个国内已报道种亦作了生境和分布地点的引证。所有研究菌株的干制培养物标本与活菌种均存放在山东农业大学植物病理学标本室(HSAUP)。     

齿梗孢属(丝孢纲)5个新种及中国土壤中本属真菌已知种检索表(英文)

报道5个中国土壤中齿梗孢属新种:细基齿梗孢Scolecobasidium acutimum、不等齿梗孢S.anisomerum、弯孢齿梗孢S.curvularioides、近球齿梗孢S.spheroideum和浙江齿梗孢S.zhejiangense。对新种与各自相似种的区别进行了讨论。文末附有中国土壤中已知22种齿梗孢属真菌的检索表。新种模式标本(干制培养物)与活菌种保藏于山东农业大学植物病理学标本室(HSAUP),等模式标本(干制培养物)存放在中国科学院真菌标本馆(HMAS)。     

Taxonomy and phylogeny of new wood- and soil-inhabiting Sporothrix species in the Ophiostoma stenoceras-Sporothrix schenckii complex

Sporothrix, one of the anamorph genera of Ophiostoma, includes the important human pathogen S. schenckii and various fungi associated with insects and sap stain of wood. A survey of fungi from wood utility poles in South Africa yielded two distinct groups of Sporothrix isolates from different geographical areas. DNA sequence and morphological data derived in this study showed that isolates in these groups represent two novel species in the S. schenckii-O. stenoceras species complex. A new species isolated from pine poles and rosebush wood and phylogenetically closely related to S. pallida is described here as Sporothrix stylites. Phylogenetic analyses also confirmed the synonymy of S. albicans and S. nivea with S. pallida. Sporothrix stylites and S. pallida also are related closely to the isolates from soil, previously treated as "environmental" isolates of S. schenckii. Soil isolates are clearly distinct from human isolates of S. schenckii. We describe the former here as Sporothrix humicola. The isolates from eucalypt poles group peripheral to most other species in the S. schenckii-O. stenoceras complex and are newly described as Sporothrix lignivora. Phylogenetic analyses of sequences of isolates from soil and wood together with those of clinical isolates showed that the human-pathogenic strains form an aggregate of several cryptic species.     

Molecular Evidence for Distinct Genotypes of Monkey B Virus (Herpesvirus Simiae) Which Are Related to the Macaque Host Species

Although monkey B virus (herpesvirus simiae; BV) is common in all macaque species, fatal human infections appear to be associated with exposure to rhesus macaques (Macaca mulatta), suggesting that BV isolates from rhesus monkeys may be more lethal to nonmacaques than are BV strains indigenous to other macaque species. To determine if significant differences that would support this supposition exist among BV isolates, we compared multiple BV strains isolated from rhesus, cynomolgus, pigtail, and Japanese macaques. Antigenic analyses indicated that while the isolates were very closely related to one another, there are some antigenic determinants that are specific to BV isolates from different macaque species. Restriction enzyme digest patterns of viral DNA revealed marked similarities between rhesus and Japanese macaque isolates, while pigtail and cynomolgus macaque isolates had distinctive cleavage patterns. To further compare genetic diversity among BV isolates, DNA sequences from two regions of the viral genome containing genes that are conserved (UL27 and US6) and variable (US4 and US5) among primate alphaherpesviruses, as well as from two noncoding intergenic regions, were determined. From these sequence data and a phylogenetic analysis of them it was evident that while all isolates were closely related strains of BV, there were three distinct genotypes. The three BV genotypes were directly related to the macaque species of origin and were composed of (i) isolates from rhesus and Japanese macaques, (ii) cynomolgus monkey isolates, and (iii) isolates from pigtail macaques. This study demonstrates the existence of different BV genotypes which are related to the macaque host species and thus provides a molecular basis for the possible existence of BV isolates which vary in their levels of pathogenicity for nonmacaque species.     

凝胶电冰与腐霉属的分类

用聚丙烯酰胺凝胶电泳技术分析27株计23种腐霉的菌体蛋白,结果表明:蛋白带型在种内表现出一致性,在种间则差异显著。     

Fusarium solani species complex isolates conspecific with Fusarium solani f. sp. cucurbitae race 2 from naturally infected human and plant tissue and environmental sources are equally virulent on plants, grow at 37 degrees C and are interfertile

In a previous taxonomic study based on multilocus sequencing of Fusarium from clinical specimens and hospital environments, the most common lineage was Fusarium solani species complex group 1 (FSSC 1) which is conspecific with F. solani f. sp. cucurbitae race 2, a pathogen of cucurbit fruits. The aims of our study were to determine if clinical and environmental isolates of FSSC 1 are plant pathogens and members of the same biological species as cucurbit isolates, and to determine if all isolates can germinate, grow and sporulate at 37 degrees C. Isolates from the different sources did not differ in virulence on zucchini fruits. All FSSC 1 isolates were pathogenic and produced more rot than FSSC isolates from plant hosts other than cucurbits. Both mating types were found among isolates from each of the sources, and all isolates were sexually compatible with cucurbit isolates. All isolates germinated, grew and sporulated at 37 degrees C. This is the first report in which plant pathogenicity has been verified for a collection of human clinical isolates. Our data are consistent with the hypothesis that all FSSC 1 isolates, regardless of source, are a single biological species, equally virulent plant pathogens and tolerant of the human body temperature.     

Re-evaluation of Japanese Phytophthora isolates based on molecular phylogenetic analyses

Over the past 40 years in Japan, Phytophthora isolates have been collected from various diseased host tissues and infested soils and identified using morphological characters. In order to develop a molecular method for the characterization of Japanese Phytophthora species, we obtained nuclear ribosomal ITS and LSU and mitochondrial coxI DNA sequences from 151 isolates representing 21 known species and 10 unidentified isolates. These were compared with similar sequences from representative isolates of known species. Of these, 124 isolates were found to have been correctly identified. Among the remaining 37 isolates, 19 showed high homology with other described species. The remaining 18 isolates showed only low levels of homology with any known species, and generated monophyletic sub-clades in a phylogenetic tree based on the ITS and nLSU regions and the coxI gene. Therefore, these isolates are candidates for new species, falling into six groups. Together, the Japanese isolates were found to represent phylogenetically diverse groups of species. In a sequence variation analysis, the ITS regions and the coxI genes were found to be more variable than the nLSU sequences, suggesting that they will be more useful for Phytophthora identification.     

New sources of cytochalasins A and B from dematiaceous hyphomycetes

One hundred isolates of 27 species belonging to 13 genera of dematiaceous hyphomycetes were screened for production of cytochalasins A and B. Most of these isolates (94) were obtained from Assiut University Culture Collection, Botany Department, Faculty of Science, Assiut University, Egypt; three isolates from CBS, The Netherlands; two isolates from DSM, Germany; and one isolate from IMI, UK. The results revealed that 10 isolates of six species representing five genera of fungi produced cytochalasins A and/or B. These species are Alternaria chlamydospora, Cochliobolus spicifer, Diplococcum spicatum, Phoma herbarum, Phoma multipara and Setosphaeria rostrata. This is the first report for the production of cytochalasins A and/or B by these species of dematiaceous hyphomycetes.     

Aspergillus calidoustus sp. nov., causative agent of human infections previously assigned to Aspergillus ustus

Aspergillus ustus is a relatively rare human pathogen causing invasive infections in immunocompromised hosts. In this study isolates originating from clinical and other sources have been examined using molecular, morphological, and physiological approaches to clarify their species assignment. Phylogenetic analysis of partial beta-tubulin, calmodulin, actin, and intergenic transcribed spacer sequences indicated that none of the clinical isolates recognized previously as A. ustus belongs to this species. All but two of these isolates formed a well-defined clade related to A. pseudodeflectus based on sequence analysis of protein-coding regions. Morphological and physiological examination of these isolates indicated that they are able to grow above 37 degrees C, in contrast with A. ustus isolates, and give a positive Ehrlich reaction, in contrast with related species including A. granulosus, A. ustus, and A. pseudodeflectus. These isolates are proposed as a new species, A. calidoustus. Antifungal susceptibility testing showed that this species has decreased susceptibilities to several antifungal drugs. The triazoles are inactive in vitro, including the new azole posaconazole.     

Isolates of Microbotryum violaceum from North American host species are phylogenetically distinct from their European host-derived counterparts

Microbotryum violaceum is a basidiomycete that infects the anthers of its Caryophyllaceae host species. Individual fungal isolates are host limited, though they are not morphologically distinct. This study used variable regions of the highly conserved gamma-tubulin, beta-tubulin, and ribosomal RNA-encoding genes to determine the relationships among M. violaceum fungal isolates from different host species and different geographical locations. Phylogenetic trees from intron nucleotide sequences in two protein-coding genes were compared to trees produced from internal transcribed spacers (ITS) of rDNA. Phylogenetic analyses suggested that there are two clades, one from North America and one from Europe. Isolates from both clades grouped according to host species, although in some analyses isolates from closely related host species were placed together. These results are consistent with the view that M. violaceum has experienced cospeciation with its hosts.     

Prevalence of Serotypes of Salmonella

The distribution of species and serotypes of Salmonella among 2,498 cultures which were isolated in the United States and its territories is presented. These isolates were received for examination during the 12-month period between October 1, 1966 and September 30, 1967. These and other data obtained from the Salmonella Surveillance Summaries for the past five years indicate that a relatively small number of species and serotypes of Salmonella are regularly isolated from diagnostic specimens. Of approximately 1,300 presently known Salmonella species and serotypes, 33 account for almost 90% of the isolates reported from humans and approximately 80% of the isolates from nonhuman sources. The 50 most prevalent species and serotypes account for 97% of the isolates from humans. An abbreviated antigenic schema based on these 50 species and serotypes of Salmonella, in conjunction with adequate biochemical tests, permits complete bacteriological characterization of the common Salmonella     

Molecular identification and phylogeny of Armillaria isolates from South America and Indo-Malaysia

Armillaria root rot is a serious disease, chiefly of woody plants, caused by many species of Armillaria that occur in temperate, tropical and subtropical regions of the world. Very little is known about Armillaria in South America and Southeast Asia, although Armillaria root rot is well known in these areas. In this study, we consider previously unidentified isolates collected from trees with symptoms of Armillaria root rot in Chile, Indonesia and Malaysia. In addition, isolates from basidiocarps resembling A. novae-zelandiae and A. limonea, originating from Chile and Argentina, respectively, were included in this study because their true identity has been uncertain. All isolates in this study were compared, based on their similarity in ITS sequences with previously sequenced Armillaria species, and their phylogenetic relationship with species from the Southern Hemisphere was considered. ITS sequence data for Armillaria also were compared with those available at GenBank. Parsimony and distance analyses were conducted to determine the phylogenetic relationships between the unknown isolates and the species that showed high ITS sequence similarity. In addition, IGS-1 sequence data were obtained for some of the species to validate the trees obtained from the ITS data set. Results of this study showed that the ITS sequences of the isolates obtained from basidiocarps resembling A. novae-zelandiae are most similar to those for this species. ITS sequences for isolates from Indonesia and Malaysia had the highest similarity to A. novae-zelandiae but were phylogenetically separated from this species. Isolates from Chile, for which basidiocarps were not found, were similar in their ITS and IGS-1 sequences to the isolate from Argentina that resembled A. limonea. These isolates, however, had the highest ITS and IGS-1 sequence similarity to authentic isolates of A. luteobubalina and were phylogenetically more closely related to this species than to A. limonea.