Multi‐scale effects of impoundments on genetic structure of creek chub (Semotilus atromaculatus) in the Kansas River basin

1. Habitat fragmentation has been implicated as a primary cause for the ongoing erosion of global biodiversity, yet our understanding of the consequences in lotic systems is limited for many species and regions. Because of harsh environmental conditions that select for high colonisation rates, prairie stream fishes may be particularly vulnerable to the effects of fragmentation. Hence, there is urgent need for broader understanding of fragmentation in prairie streams such that meaningful conservation strategies can be developed. Further, examination at large spatial scales, including multiple impoundments and un‐impounded catchments, will help identify the spatial extent of species movement through the landscape. 2. Our study used data from 10 microsatellite loci to describe the genetic structure of creek chub (Semotilus atromaculatus) populations across four catchments (three impounded and one un‐impounded) in the Kansas River basin. We investigated whether genetic diversity was eroded in response to habitat fragmentation imposed by reservoirs and whether intervening lentic habitat increased resistance to dispersal among sites within a catchment. 3. Our analyses revealed that genetic diversity estimates were consistent with large populations regardless of the location of the sampled tributaries, and there was little evidence of recent population reductions. Nevertheless, we found a high degree of spatial genetic structure, suggesting that catchments comprise a set of isolated genetic units and that sample sites within catchments are subdivided into groups largely defined by intervening habitat type. Our data therefore suggest that lentic habitat is a barrier to dispersal among tributaries, thus reducing the opportunity for genetic rescue of populations in tributaries draining into reservoirs. Isolation by a reservoir, however, may not be immediately deleterious if the isolated tributary basin supports a large population.     

Extensive polymorphism and geographical variation at a positively selected MHC class II B gene of the lesser kestrel (Falco naumanni)

Understanding the selective forces that shape genetic variation in natural populations remains a high priority in evolutionary biology. Genes at the major histocompatibility complex (MHC) have become excellent models for the investigation of adaptive variation and natural selection because of their crucial role in fighting off pathogens. Here we present one of the first data sets examining patterns of MHC variation in wild populations of a bird of prey, the lesser kestrel, Falco naumanni . We report extensive polymorphism at the second exon of a putatively functional MHC class II gene, Fana- DAB*1. Overall, 103 alleles were isolated from 121 individuals sampled from Spain to Kazakhstan. Bayesian inference of diversifying selection suggests that several amino acid sites may have experienced strong positive selection (ω = 4.02 per codon). The analysis also suggests a prominent role of recombination in generating and maintaining MHC diversity (ρ = 4 Nc  = 0.389 per codon, θ = 0.017 per codon). Both the Fana -DAB*1 locus and a set of eight polymorphic microsatellite markers revealed an isolation-by-distance pattern across the Western Palaearctic ( r  = 0.67; P  = 0.01 and r  = 0.50; P  = 0.04, respectively). Nonetheless, geographical variation at the MHC contrasts with relatively uniform distributions in the frequencies of microsatellite alleles. In addition, we found lower fixation rates in the MHC than those predicted by genetic drift after controlling for neutral mitochondrial sequences. Our results therefore underscore the role of balancing selection as well as spatial variations in parasite-mediated selection regimes in shaping MHC diversity when gene flow is limited.     

景观连接度的概念、度量及其应用

景观连接度是指景观促进或阻碍生物体或某种生态过程在源斑块间运动的程度,反映了景观的功能特征。景观连接度理论与方法是景观评价、管理和生态规划的重要基础,对于区域可持续发展和生物多样性保护等方面的研究都具有重要指导意义。综述了国内外近10a来有关景观连接度概念、度量方法及其生态学意义的最新进展,并探讨了景观连接度与景观要素间的关系及其潜在应用前景,以期为深入开展景观空间格局与生态过程间关系的研究与应用提供参考。     

基于景观连通性的云南省临沧市荒野网络构建

基于景观连通性构建荒野网络是当前荒野保护策略的一大重点。本研究应用GIS技术计算出临沧市荒野连续谱,采用形态学空间格局分析(MSPA)模型识别出荒野源地,通过最小累计阻力模型(MCR)和电路理论构建荒野廊道和网络并提取荒野战略点,分析荒野网络特征,并提出临沧市荒野保护策略与生态规划建议。结果表明: 临沧市荒野主要分布在海拔1000～2500 m区域且空间上呈现出南多北少、东多西少的格局。3级荒野占临沧市荒野总面积的55%,说明研究区荒野质量较高。基于MSPA分析的荒野源地共有27个,大部分分布于东部和南部临翔、沧源等地,西部和北部凤庆、永德地区的荒野源地分布较少。荒野网络中存在63条荒野廊道,其中,重要廊道16条,一般廊道47条;共存在186个荒野战略点,其中,荒野节点53个,障碍点133个。采用识别的荒野源地和提取的荒野廊道构建了临沧市荒野网络,其具有稳定性高、抗干扰能力强、连通性较好的优点。最后,提出了“三区一体”的保护策略与生态规划建议,对临沧市建立生态安全格局以及中国荒野保护实践化具有参考和借鉴意义。     

植物景观遗传学研究进展

植物景观遗传学是新兴的景观遗传学交叉学科的一个重要研究方向。目前植物景观遗传学的研究虽落后于动物,但其在生物多样性保护方面具有的巨大潜力不可忽视。从景观特征对遗传结构、环境因素对适应性遗传变异影响两个方面,系统综述了近十年来国际上植物景观遗传学的研究焦点和研究进展,比较了植物景观遗传学与动物景观遗传学研究在研究设计和研究方法上的异同,并基于将来植物景观遗传学由对空间遗传结构的描述发展为对景观遗传效应的量化分析及预测的发展框架,具体针对目前景观特征与遗传结构研究设计的系统性差、遗传结构与景观格局在时间上的误配、适应性位点与环境变量的模糊匹配、中性遗传变异与适应性遗传变异研究的分隔、景观与遗传关系分析方法的局限等五个方面提出了研究对策。