Selenium Thresholds for Fish from Cold Freshwaters

A review of reproductive effects studies with cold-water fish species including trout (cutthroat, brook, rainbow), white sucker, and northern pike indicates that they have higher tolerances to selenium taken up via dietary sources than warm-water fish species. The USEPA (2004) USEPA (U.S. Environmental Protection Agency). 2004. Draft Aquatic Life Water Quality Criteria for Selenium—2004, Washington, DC, , USA: Office of Water. EPA-822-D-04-001 [Google Scholar] draft Se tissue criterion of 7.9 mg/kg dw will provide a conservative level of protection for these cold-water fish species. However, site- and species-specific studies are required to set realistically protective upper guideline values.     

Diel Migration and Spatial Distribution of Fish in a Small Stratified Lake

We used fishery surveys from 1954 to 1957 to determine the relationship between salinity and prairie stream-fish assemblage composition prior to the major drought of the 1950s and subsequent anthropogenic modifications. A total of 78,931 fishes were captured, representing 13 families and 44 species. Species were classified as having low, moderate, or high salinity tolerances based on k-means clustering of detrended correspondence scores. The proportion of species with high salinity tolerances was correlated positively (r = 0.74) with salinity, whereas the proportion of species with low (r = −0.69) or moderate (r = −0.36) tolerances was correlated strongly and negatively with salinity. Many of the low or moderate salinity tolerant species found in the 1950s were not collected in studies conducted 15 and 35 years later. Examination of these studies provides compelling evidence that salinity has been a dominant and persistent factor in affecting the structure of stream-fish assemblages for the past 50 years.     

Critical Review of Proposed Residue-Based Selenium Toxicity Thresholds for Freshwater Fish

Proposed fish toxicity thresholds for interpreting the biological significance of selenium concentrations measured in environmental media include 2 to 5?µg/L in water, 4?mg/kg dw in fish whole body tissue, 10?mg/kg dw in fish ovaries, and 3?mg/kg dw in fish diets. Use of these thresholds would likely identify fish populations as being at risk at numerous sites across the U.S. However, selenium effects on fish populations in the field have only been conclusively demonstrated at a few locations. Based on our critical review, these threshold values are not consistent with USEPA methodology for deriving criteria, in many cases are not supported by the scientific literature, and, as a result, are generally overly conservative. Based on currently available information, we believe the scientific literature is not supportive of generic sediment or water thresholds, but is supportive of alternative separate whole body thresholds of 9?mg/kg dw for warmwater fish and 6?mg/kg dw for larval coldwater anadromous fish, an ovary threshold of 17?mg/kg dw for warmwater fish, and fish dietary thresholds of 10 and 11?mg/kg dw for warmwater fish and larval coldwater anadromous fish, respectively.     

Modeling Reef Fish Biomass,Recovery Potential,and Management Priorities in the Western Indian Ocean

Fish biomass is a primary driver of coral reef ecosystem services and has high sensitivity to human disturbances, particularly fishing. Estimates of fish biomass, their spatial distribution, and recovery potential are important for evaluating reef status and crucial for setting management targets. Here we modeled fish biomass estimates across all reefs of the western Indian Ocean using key variables that predicted the empirical data collected from 337 sites. These variables were used to create biomass and recovery time maps to prioritize spatially explicit conservation actions. The resultant fish biomass map showed high variability ranging from ~15 to 2900 kg/ha, primarily driven by human populations, distance to markets, and fisheries management restrictions. Lastly, we assembled data based on the age of fisheries closures and showed that biomass takes ~ 25 years to recover to typical equilibrium values of ~1200 kg/ha. The recovery times to biomass levels for sustainable fishing yields, maximum diversity, and ecosystem stability or conservation targets once fishing is suspended was modeled to estimate temporal costs of restrictions. The mean time to recovery for the whole region to the conservation target was 8.1(± 3SD) years, while recovery to sustainable fishing thresholds was between 0.5 and 4 years, but with high spatial variation. Recovery prioritization scenario models included one where local governance prioritized recovery of degraded reefs and two that prioritized minimizing recovery time, where countries either operated independently or collaborated. The regional collaboration scenario selected remote areas for conservation with uneven national responsibilities and spatial coverage, which could undermine collaboration. There is the potential to achieve sustainable fisheries within a decade by promoting these pathways according to their social-ecological suitability.     

The Asian Fish Tapeworm Bothriocephalus acheilognathi: a Potential Threat to Native Freshwater Fish Species in Mexico

Introduction of the parasite Bothriocephalus acheilognathi Yamaguti, 1934 with the herbivorous carp Ctenopharyngodon idellus, and other cyprinids, has been documented in almost every continent, except Antarctica. This study presents the current geographical distribution of this cestode in the freshwater fish of Mexico, highlighting infections in autochthonous and endemic species. It compiles existing information and presents original data. B. acheilognathi is widely dispersed among the freshwater fish of Mexico, being recorded to date in 49 fish species from 26 genera, 7 families and 5 orders. B. acheilognathi is reported from Mexico for the first time in Dionda ipni, Notropis celayensis, Yuriria alta, Gambusia vittata, Poecilia butleri, P. mexicana, Poeciliopsis baenschi, Poeciliopsis sp., Cichlasoma cyanoguttatum and C. labridens. The new hosts identified in this study bring the total number of known host species to 102 in 14 families and 7 orders of freshwater fishes around the world. Given its wide distribution among Mexican freshwater fish species, the abundance of the parasite and its high pathogenicity, parasitological data for B. acheilognathi should be considered as an important factor in native fish conservation policies. Biological changes in the freshwater habitats in Mexico caused by the introduction of exotic fish species and their parasites are virtually ubiquitous and extremely difficult to eradicate once established. As such, they should be considered as one of the most serious threats to native fish conservation.     

Spatial Structure and Distribution of Small Pelagic Fish in the Northwestern Mediterranean Sea

Understanding the ecological and anthropogenic drivers of population dynamics requires detailed studies on habitat selection and spatial distribution. Although small pelagic fish aggregate in large shoals and usually exhibit important spatial structure, their dynamics in time and space remain unpredictable and challenging. In the Gulf of Lions (north-western Mediterranean), sardine and anchovy biomasses have declined over the past 5 years causing an important fishery crisis while sprat abundance rose. Applying geostatistical tools on scientific acoustic surveys conducted in the Gulf of Lions, we investigated anchovy, sardine and sprat spatial distributions and structures over 10 years. Our results show that sardines and sprats were more coastal than anchovies. The spatial structure of the three species was fairly stable over time according to variogram outputs, while year-to-year variations in kriged maps highlighted substantial changes in their location. Support for the McCall''s basin hypothesis (covariation of both population density and presence area with biomass) was found only in sprats, the most variable of the three species. An innovative method to investigate species collocation at different scales revealed that globally the three species strongly overlap. Although species often co-occurred in terms of presence/absence, their biomass density differed at local scale, suggesting potential interspecific avoidance or different sensitivity to local environmental characteristics. Persistent favourable areas were finally detected, but their environmental characteristics remain to be determined.     

The Bacteriocinogenic Potential of Marine Microorganisms

Russian Journal of Marine Biology - One of the modern antibacterial strategies to control various infectious pathogens in agriculture, veterinary medicine, and the food industry is the use of...     

Metabolic Costs of Feeding Predictively Alter the Spatial Distribution of Individuals in Fish Schools

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Spatial Distribution of Potential in a Flat Cell: Application to the Catfish Horizontal Cell Layers

An analytical solution is obtained for the three-dimensional spatial distribution of potential inside a flat cell, such as the layer of horizontal cells, as a function of its geometry and resistivity characteristics. It was found that, within a very large range of parameter values, the potential is given by [Formula: see text] where r = ρ/ρ₀, = z/ρ₀, ρ = (R_i/R_m)·ρ₀, δ = h/ρ₀; K is a constant; J is the assumed synaptic current; ρ, z are cylindrical coordinates; ρ₀ is the radius of the synaptic area of excitation; h is the cell thickness; and R_i, R_m are the intracellular and membrane resistivities, respectively. Formula A closely fits data for the spatial decay of potential which were obtained from the catfish internal and external horizontal cells. It predicts a decay which is exponential down to about 40% of the maximum potential but is much slower than exponential below that level, a characteristic also exhibited by the data. Such a feature in the decay mode allows signal integration over the large retinal areas which have been observed experimentally both at the horizontal and ganglion cell stages. The behavior of the potential distribution as a function of the flat cell parameters is investigated, and it is found that for the range of the horizontal cell thicknesses (10-50 μ) the decay rate depends solely on the ratio R_m/R_i. Data obtained from both types of horizontal cells by varying the diameter of the stimulating spot and for three widely different intensity levels were closely fitted by equation A. In the case of the external horizontal cell, the fit for different intensities was obtained by varying the ratio R_m/R_i; in the case of the internal horizontal cell it was found necessary, in order to fit the data for different intensities, to vary the assumed synaptic current J.     

Frequency Dependence of Signal Power and Spatial Reach of the Local Field Potential

Despite its century-old use, the interpretation of local field potentials (LFPs), the low-frequency part of electrical signals recorded in the brain, is still debated. In cortex the LFP appears to mainly stem from transmembrane neuronal currents following synaptic input, and obvious questions regarding the ‘locality’ of the LFP are: What is the size of the signal-generating region, i.e., the spatial reach, around a recording contact? How far does the LFP signal extend outside a synaptically activated neuronal population? And how do the answers depend on the temporal frequency of the LFP signal? Experimental inquiries have given conflicting results, and we here pursue a modeling approach based on a well-established biophysical forward-modeling scheme incorporating detailed reconstructed neuronal morphologies in precise calculations of population LFPs including thousands of neurons. The two key factors determining the frequency dependence of LFP are the spatial decay of the single-neuron LFP contribution and the conversion of synaptic input correlations into correlations between single-neuron LFP contributions. Both factors are seen to give low-pass filtering of the LFP signal power. For uncorrelated input only the first factor is relevant, and here a modest reduction (<50%) in the spatial reach is observed for higher frequencies (>100 Hz) compared to the near-DC () value of about . Much larger frequency-dependent effects are seen when populations of pyramidal neurons receive correlated and spatially asymmetric inputs: the low-frequency () LFP power can here be an order of magnitude or more larger than at 60 Hz. Moreover, the low-frequency LFP components have larger spatial reach and extend further outside the active population than high-frequency components. Further, the spatial LFP profiles for such populations typically span the full vertical extent of the dendrites of neurons in the population. Our numerical findings are backed up by an intuitive simplified model for the generation of population LFP.     

Spatial Distribution of Marine Crenarchaeota Group I in the Vicinity of Deep-Sea Hydrothermal Systems

Distribution profiles of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems were mapped with culture-independent molecular techniques. Planktonic samples were obtained from the waters surrounding two geographically and geologically distinct hydrothermal systems, and the abundance of marine crenarchaeota group I was examined by 16S ribosomal DNA clone analysis, quantitative PCR, and whole-cell fluorescence in situ hybridization. A much higher proportion of marine crenarchaeota group I within the microbial community was detected in deep-sea hydrothermal environments than in normal deep and surface seawaters. The highest proportion was always obtained from the ambient seawater adjacent to hydrothermal emissions and chimneys but not from the hydrothermal plumes. These profiles were markedly different from the profiles of epsilon-Proteobacteria, which are abundant in the low temperatures of deep-sea hydrothermal environments.     

The Effects of Sub-Regional Climate Velocity on the Distribution and Spatial Extent of Marine Species Assemblages

Many studies illustrate variable patterns in individual species distribution shifts in response to changing temperature. However, an assemblage, a group of species that shares a common environmental niche, will likely exhibit similar responses to climate changes, and these community-level responses may have significant implications for ecosystem function. Therefore, we examine the relationship between observed shifts of species in assemblages and regional climate velocity (i.e., the rate and direction of change of temperature isotherms). The assemblages are defined in two sub-regions of the U.S. Northeast Shelf that have heterogeneous oceanography and bathymetry using four decades of bottom trawl survey data and we explore temporal changes in distribution, spatial range extent, thermal habitat area, and biomass, within assemblages. These sub-regional analyses allow the dissection of the relative roles of regional climate velocity and local physiography in shaping observed distribution shifts. We find that assemblages of species associated with shallower, warmer waters tend to shift west-southwest and to shallower waters over time, possibly towards cooler temperatures in the semi-enclosed Gulf of Maine, while species assemblages associated with relatively cooler and deeper waters shift deeper, but with little latitudinal change. Conversely, species assemblages associated with warmer and shallower water on the broad, shallow continental shelf from the Mid-Atlantic Bight to Georges Bank shift strongly northeast along latitudinal gradients with little change in depth. Shifts in depth among the southern species associated with deeper and cooler waters are more variable, although predominantly shifts are toward deeper waters. In addition, spatial expansion and contraction of species assemblages in each region corresponds to the area of suitable thermal habitat, but is inversely related to assemblage biomass. This suggests that assemblage distribution shifts in conjunction with expansion or contraction of thermal habitat acts to compress or stretch marine species assemblages, which may respectively amplify or dilute species interactions to an extent that is rarely considered. Overall, regional differences in climate change effects on the movement and extent of species assemblages hold important implications for management, mitigation, and adaptation on the U.S. Northeast Shelf.     

Fish Growth in Marine Culture Systems: A Challenge for Biotechnology

Aquaculture production is constrained largely by the growth efficiency of the species being produced. Nutritional approaches have played an important part in improving this situation, but, it is argued, the room for further improvement using such established techniques is limited. Alternative ways of improving fish production by utilizing recent biotechnological advances are explored and assessed as to their potential for commercialization in the near future. Transgenic technologies promise a revolution in aquaculture, but it is considered that consumer resistance may delay the use of transgenic fish for food production. An alternative approach could be the breeding of transgenic fodder plants without the amino acid deficiencies of existing alternatives to fish meal in aquaculture diets. The use of probiotics could reduce antibiotic use on fish farms while they might also provide the basis for ``smart' diets, tailored to specific purposes by the inclusion of microorganisms. The selection and genetic engineering of nitrifying and denitrifying bacteria could also pave the way for fully enclosed, recirculating marine culture systems, which would allow control of the environmental variables that currently restrain marine fish culture. Received August 10, 1998; accepted October 8, 1998.     

Potential Biomass Accumulation in Amazonian Regrowth Forests

Biomass accumulation in the secondary forests of abandoned pastures and slash-and-burn agricultural fallows is an important but poorly constrained component of the regional carbon budget for the Brazilian Amazon. Using empirical relationships derived from a global analysis, we predicted potential aboveground biomass accumulation (ABA) for the region's regrowth forests based on soil texture and climate data. For regrowth forests on nonsandy soils, the globally derived relationship provided a nearly unbiased linear predictor of Amazonian validation data consisting of 66 stands at seven sites; there was no significant difference between stands that regrew following use as pasture land and those that regrew following slash-and-burn agriculture. For regrowth forests on nonsandy soil, the 1 sigma error range of our ABA model was 58%–171% for the Amazonian validation data. For regrowth forests on sandy soils, the validation data were limited to 19 stands at one site, and the globally derived relationship was substantially biased multiplicatively and nonlinearly. Hence we developed a regional refinement by adding to our validation data ABA values from the two Amazonian sites with sandy soil that had previously been included in the global analysis. Based on a conservative jackknife goodness-of-fit assessment (leaving out one site at a time), we calculated a 1 sigma error range of 42%–158% for our sandy soil Amazonian regrowth forest ABA model. We present our predictions of potential regrowth forest ABA as a set of 0.5° resolution maps for the region at 5, 10, and 20 years following abandonment. Received 6 September 2000; accepted 19 April 2001.     

The Ability of Three Species of Tadpoles to Differentiate among Potential Fish Predators

The ability of prey to respond to novel predator cues may depend on the generality or specificity of the response to predator cues. We used laboratory behavioral experiments to examine the ability of tadpoles of three species of anurans (American toad, Bufo americanus ; bullfrog, Rana catesbeiana ; and green frog, R. clamitans ) to respond to the presence of two native potential predators (bluegill, Lepomis macrochirus ; and largemouth bass, Micropterus salmoides ) and one non-native potential predator (goldfish, Carassius auratus ). We also examined the effect of tadpole size on the behavioral responses of American toads and green frogs to predator cues. All three species of tadpoles responded to the presence of predator cues, although the specific responses varied among species. American toads and green frogs reduced activity in the presence of at least some fish cues, but bullfrog tadpoles did not change their activity. Bullfrogs decreased use of vegetation in the presence of some predator cues, whereas American toads and green frogs did not. American toads only responded to the presence of bluegill cues but not the other fish predator cues, whereas bullfrogs and green frogs responded more generally to the fish predators. In both American toads and green frogs, tadpole size affected behavior. For American toads, activity increased, as did the use of the vegetated side of the aquarium, in larger tadpoles. Not only did size affect American toad behavior, but it also influenced the responses of the tadpoles to predator cues. For green frogs, activity decreased in larger tadpoles. Our results suggest that behavioral responses of tadpoles to predator cues can be influenced by both the identity of the predator and the prey, as well as the size of the potential prey.     

The Spatial Distribution of Mustelidae in France

We estimated the spatial distribution of 6 Mustelidae species in France using the data collected by the French national hunting and wildlife agency under the “small carnivorous species logbooks” program. The 1500 national wildlife protection officers working for this agency spend 80% of their working time traveling in the spatial area in which they have authority. During their travels, they occasionally detect dead or living small and medium size carnivorous animals. Between 2002 and 2005, each car operated by this agency was equipped with a logbook in which officers recorded information about the detected animals (species, location, dead or alive, date). Thus, more than 30000 dead or living animals were detected during the study period. Because a large number of detected animals in a region could have been the result of a high sampling pressure there, we modeled the number of detected animals as a function of the sampling effort to allow for unbiased estimation of the species density. For dead animals -- mostly roadkill -- we supposed that the effort in a given region was proportional to the distance traveled by the officers. For living animals, we had no way to measure the sampling effort. We demonstrated that it was possible to use the whole dataset (dead and living animals) to estimate the following: (i) the relative density -- i.e., the density multiplied by an unknown constant -- of each species of interest across the different French agricultural regions, (ii) the sampling effort for living animals for each region, and (iii) the relative detection probability for various species of interest.     

Routes to Potential Bioproducts from Lignocellulosic Biomass Lignin and Hemicelluloses

An essential feature of proposed fermentation-based lignocellulose to biofuel conversion processes will be the co-production of higher value chemicals from lignin and hemicellulose components. Over the years, many routes for chemical conversion of lignin and hemicelluloses have been developed by the pulp and paper industry and we propose that some of these can be applied for bioproducts manufacturing. For lignin products, thermochemical, chemical pulping, and bleaching methods for production of polymeric and monomeric chemicals are reviewed. We conclude that peroxyacid chemistry for phenol and ring-opened products looks most interesting. For hemicellulose products, preextraction of hemicelluloses from woody biomass is important and influences the mixture of solubilized material obtained. Furfural, xylitol, acetic acid, and lactic acid are possible targets for commercialization, and the latter can be further converted to acrylic acid. Pre-extraction of hemicelluloses can be integrated into most biomass-to-biofuel conversion processes.     

Investigation of Spatial Distribution of Radiocesium in a Paddy Field as a Potential Sink

Surface soils, under various land uses, were contaminated by radionuclides that were released by the Fukushima Daiichi Nuclear Power Plant accident. Because paddy fields are one of the main land uses in Japan, we investigated the spatial distribution of radiocesium and the influence of irrigation water in a paddy field during cultivation. Soil core samples collected at a paddy field in Fukushima showed that plowing had disturbed the original depth distribution of radiocesium. The horizontal distribution of radiocesium did not show any evidence for significant influence of radiocesium from irrigation water, and its accumulation within the paddy field, since the original amount of radiocesium was much larger than was added into the paddy field by irrigation water. However, it is possible that rainfall significantly increases the loading of radiocesium.     

Potential for Biodegradation of Phthalic Acid Esters in Marine Regions

Di-(2-ethylhexyl) phthalate was the major phthalic acid ester in the Mississippi River estuary, with mean levels of 0.1 μg/g (dry weight) in surface sediments, 1.0 μg/liter in river water, and 0.7 μg/liter in delta water. Bacteria that grew aerobically on dibutyl phthalate and o-phthalic acid were readily detected in the sediments and water. Pure cultures of bacteria were isolated on seven different phthalic acid esters from freshwater and marine sources. The marine isolates were taxonomically diverse and grew on a variety of phthalic acid esters. Dibutyl phthalate and o-phthalic acid supported growth in full-strength synthetic sea-water medium, but Na⁺ -dependent catabolism was demonstrable only for o-phthalic acid.     

Identifying the Scale Thresholds for Field-Data Extrapolation via Spatial Analysis of Landscape Gradients

Despite recent advances in resolving the scale issue, it remains problematic that so many ecological field studies are still conducted only at small scales because of the constraints imposed by limited resources. To maximize the use of these data, it would be helpful if the researchers could provide guidelines for the appropriate range and scale for the extrapolation of the data and identify the new information that would be needed to extend the scope of their extrapolation. In this paper, we present a method that can be used to detect scale thresholds for the extrapolation of field data through spatial analyses of the physical landscape, using the Fushan Forest, Taiwan, as an example. First, the relationship between the vegetation and the physical landscape was inferred from sample-plot data; this information was in turn used to extrapolate the data over the whole forest area. We then compared the environmental variables in the sample plots versus those in the whole forest area via principal component analysis, landscape classification, and spatial autocorrelation analysis. Analyses of the entire Fushan Forest area showed that there are at least three major spatial scales at which physical gradients are expressed: elevation at the scale of the full forest extent (more than 3,000 m), topographic position at 550 m, and aspect at 250 m. Analyses of the sample plots showed that the plots captured only two of these gradients—topographic position and aspect, but not elevation. Therefore, information from the current field data can only be extrapolated to within 550 m from the sample plots; further information derived from cross-elevation samples is needed to extrapolate beyond that range.