THE CONTRIBUTION OF EDAPHIC HETEROGENEIYT TO THE EVOLUTION AND DIVERSITY OF BURSERACEAR TREES IN THE WESTERN AMAZON

Abstract —Environmental heterogeneity in the tropics is thought to lead to specialization in plants and thereby contribute to the diversity of the tropical flora. We examine this idea with data on the habitat specificity of 35 western Amazonian species from the genera Protium, Crepidospermum, and Tetragastris in the monophyletic tribe Protieae (Burseraceae) mapped on a molecular‐based phylogeny. We surveyed three edaphic habitats that occur throughout terra firme Amazonia: white‐sand, clay, and terrace soils in eight forests across more than 2000 km in the western Amazon. Twenty‐six of the 35 species were found to be associated with only one of three soil types, and no species was associated with all three habitats; this pattern of edaphic specialization was consistent across the entire region. Habitat association mapped onto the phylogenetic tree shows association with terrace soils to be the probable ancestral state in the group, with subsequent speciation events onto clay and white‐sand soils. The repeated gain of clay association within the clade likely coincides with the emergence of large areas of clay soils in the Miocene deposited during the Andean uplift. Character optimizations revealed that soil association was not phylogenetically clustered for white‐sand and clay specialists, suggesting repeated independent evolution of soil specificity is common within the Protieae. This phylogenetic analysis also showed that multiple cases of putative sister taxa with parapatric distributions differ in their edaphic associations, suggesting that edaphic heterogeneity was an important driver of speciation in the Protieae in the Amazon basin.     

Nutrient transport within and between habitats through seed dispersal processes by woolly monkeys in north‐western Amazonia

The contribution of vertebrate animals to nutrient cycling has proven to be important in various ecosystems. However, the role of large bodied primates in nutrient transport in neotropical forests is not well documented. Here, we assess the role of a population of woolly monkeys (Lagothrix lagothricha lugens) as vectors of nutrient movement through seed dispersal. We estimated total seed biomass transported by the population within and between two habitats (terra firme and flooded forests) at Tinigua Park, Colombia, and quantified potassium (K), phosphorus (P) and nitrogen (N) content in seeds of 20 plant species from both forests. Overall, the population transported an estimated minimum of 11.5 (±1.2 SD) g of potassium, 13.2 (±0.7) g of phosphorus and 34.3 (±0.1) g nitrogen, within 22.4 (±2.0) kg of seeds ha^?1 y^?1. Approximately 84% of all nutrients were deposited in the terra firme forest mostly through recycling processes, and also through translocation from the flooded forest. This type of translocation represents an important and high‐quality route of transport since abiotic mechanisms do not usually move nutrients upwards, and since chemical tests show that seeds from flooded forests have comparatively higher nutrient contents. The overall contribution to nutrient movement by the population of woolly monkeys is significant because of the large amount of biomass transported, and the high phosphorus content of seeds. As a result, the phosphorus input generated by these monkeys is of the same order of magnitude as other abiotic mechanisms of nutrient transport such as atmospheric deposition and some weathering processes. Our results suggest that via seed dispersal processes, woolly monkey populations can contribute to nutrient movement in tropical forests, and may act as important nutrient input vectors in terra firme forests. Am. J. Primatol. 72:992–1003, 2010. © 2010 Wiley‐Liss, Inc.     

Imaging spectroscopy reveals the effects of topography and logging on the leaf chemistry of tropical forest canopy trees

Logging, pervasive across the lowland tropics, affects millions of hectares of forest, yet its influence on nutrient cycling remains poorly understood. One hypothesis is that logging influences phosphorus (P) cycling, because this scarce nutrient is removed in extracted timber and eroded soil, leading to shifts in ecosystem functioning and community composition. However, testing this is challenging because P varies within landscapes as a function of geology, topography and climate. Superimposed upon these trends are compositional changes in logged forests, with species with more acquisitive traits, characterized by higher foliar P concentrations, more dominant. It is difficult to resolve these patterns using traditional field approaches alone. Here, we use airborne light detection and ranging‐guided hyperspectral imagery to map foliar nutrient (i.e. P, nitrogen [N]) concentrations, calibrated using field measured traits, over 400 km² of northeastern Borneo, including a landscape‐level disturbance gradient spanning old‐growth to repeatedly logged forests. The maps reveal that canopy foliar P and N concentrations decrease with elevation. These relationships were not identified using traditional field measurements of leaf and soil nutrients. After controlling for topography, canopy foliar nutrient concentrations were lower in logged forest than in old‐growth areas, reflecting decreased nutrient availability. However, foliar nutrient concentrations and specific leaf area were greatest in relatively short patches in logged areas, reflecting a shift in composition to pioneer species with acquisitive traits. N:P ratio increased in logged forest, suggesting reduced soil P availability through disturbance. Through the first landscape scale assessment of how functional leaf traits change in response to logging, we find that differences from old‐growth forest become more pronounced as logged forests increase in stature over time, suggesting exacerbated phosphorus limitation as forests recover.     

Variations in Amazon forest productivity correlated with foliar nutrients and modelled rates of photosynthetic carbon supply

The rate of above-ground woody biomass production, W(P), in some western Amazon forests exceeds those in the east by a factor of 2 or more. Underlying causes may include climate, soil nutrient limitations and species composition. In this modelling paper, we explore the implications of allowing key nutrients such as N and P to constrain the photosynthesis of Amazon forests, and also we examine the relationship between modelled rates of photosynthesis and the observed gradients in W(P). We use a model with current understanding of the underpinning biochemical processes as affected by nutrient availability to assess: (i) the degree to which observed spatial variations in foliar [N] and [P] across Amazonia affect stand-level photosynthesis; and (ii) how these variations in forest photosynthetic carbon acquisition relate to the observed geographical patterns of stem growth across the Amazon Basin. We find nutrient availability to exert a strong effect on photosynthetic carbon gain across the Basin and to be a likely important contributor to the observed gradient in W(P). Phosphorus emerges as more important than nitrogen in accounting for the observed variations in productivity. Implications of these findings are discussed in the context of future tropical forests under a changing climate.     

Tree species composition and diversity gradients in white-water forests across the Amazon Basin

Aim Attention has increasingly been focused on the floristic variation within forests of the Amazon Basin. Variations in species composition and diversity are poorly understood, especially in Amazonian floodplain forests. We investigated tree species composition, richness and α diversity in the Amazonian white‐water (várzea) forest, looking particularly at: (1) the flood‐level gradient, (2) the successional stage (stand age), and (3) the geographical location of the forests. Location Eastern Amazonia, central Amazonia, equatorial western Amazonia and the southern part of western Amazonia. Methods The data originate from 16 permanent várzea forest plots in the central and western Brazilian Amazon and in the northern Bolivian Amazon. In addition, revised species lists of 28 várzea forest inventories from across the Amazon Basin were used. Most important families and species were determined using importance values. Floristic similarity between plots was calculated to detect similarity variations between forest types and over geographical distances. To check for spatial diversity gradients, α diversity (Fisher) of the plots was correlated with stand age, longitudinal and latitudinal plot location, and flood‐level gradient. Results More than 900 flood‐tolerant tree species were recorded, which indicates that Amazonian várzea forests are the most species‐rich floodplain forests worldwide. The most important plant families recorded also dominate most Neotropical upland forests, and c. 31% of the tree species listed also occur in the uplands. Species distribution and diversity varied: (1) on the flood‐level gradient, with a distinct separation between low‐várzea forests and high‐várzea forests, (2) in relation to natural forest succession, with species‐poor forests in early stages of succession and species‐rich forests in later stages, and (3) as a function of geographical distance between sites, indicating an increasing α diversity from eastern to western Amazonia, and simultaneously from the southern part of western Amazonia to equatorial western Amazonia. Main conclusions The east‐to‐west gradient of increasing species diversity in várzea forests reflects the diversity patterns also described for Amazonian terra firme. Despite the fine‐scale geomorphological heterogeneity of the floodplains, and despite high disturbance of the different forest types by sedimentation and erosion, várzea forests are dominated by a high proportion of generalistic, widely distributed tree species. In contrast to high‐várzea forests, where floristic dissimilarity increases significantly with increasing distance between the sites, low‐várzea forests can exhibit high floristic similarity over large geographical distances. The high várzea may be an important transitional zone for lateral immigration of terra firme species to the floodplains, thus contributing to comparatively high species richness. However, long‐distance dispersal of many low‐várzea trees contributes to comparatively low species richness in highly flooded low várzea.     

Phytochemical variation within a single plant species influences foraging behavior of deer

To determine how black‐tailed deer Odocoileus hemionus columbianus respond to phytochemical cues while browsing in heterogeneous phytochemical environments, we offered captive and free‐range deer cloned rooted cuttings and seedlings of western redcedar Thuja plicata selected for varying monoterpene content. Black‐tailed deer were thus allowed to browse among a controlled array of phytochemical cues in a series of experiments designed to evaluate foraging behavior at fine (within plot) and coarse (plot selection) scales. Within‐plot diet selection experiments demonstrated that browse preference for individual western redcedar plants was a function of foliar monoterpene concentration. Individual plant palatability combined with momentary maximization foraging strategy promoted survival of heavily defended plants. Among‐plot foraging experiments demonstrated that coarse‐scale foraging preferences were strongly influenced by distributions of high monoterpene‐containing western redcedar in available plots. Olfaction may play a significant role in both fine and coarse‐scale browse behaviors of deer as they employ a risk‐averse foraging strategy.     

Understanding the Influences of Spatial Patterns on N Availability Within the Brazilian Amazon Forest

Nitrogen variations at different spatial scales and integrated across functional groups were addressed for lowland tropical forests in the Brazilian Amazon as follows: (1) how does N availability vary across the region over different spatial scales (regional × landscape scale); (2) how are these variations in N availability integrated across plant functional groups (legume × non-legume trees). Leaf N, P, and Ca concentrations as well the leaf N isotope ratios (δ¹⁵N) from a large set of legume and non-legume tree species were measured. Legumes had higher foliar N/Ca ratios than non-legumes, consistent with the high energetic costs in plant growth associated with higher foliar P/Ca ratios found in legumes than in non-legumes. At the regional level, foliar δ¹⁵N decreased with increasing rainfall. At the landscape level, N availability was higher in the forests on clayey soils on the plateau than in forests on sandier soils. The isotope as well as the non-isotope data relationships here documented, explain to a large extent the variation in δ¹⁵N signatures across gradients of rainfall and soil. Although at the regional level, the precipitation regime is a major determinant of differences in N availability, at the landscape level, under the same precipitation regime, soil type seems to be a major factor influencing the availability of N in the Brazilian Amazon forest.     

Phyllostomid Bat Assemblage Structure in Amazonian Flooded and Unflooded Forests

In Amazonia, the assemblages of several taxa differ significantly between upland terra firme and white‐water flooded várzea forests, but little is known about the diversity and distribution of bats in these two forest types. We compare the spatio‐temporal patterns of bat assemblage composition and structure in adjacent terra firme and várzea forests in the lower Purus River region of central Brazilian Amazonia. Bats were sampled using mist nets at five sites in each forest type during 40 nights (2400 net‐hours). We captured 1069 bats representing 42 species and Phyllostomidae bats comprised 99.3 percent of all captures. The bat assemblages in várzea and terra firme forests were significantly different, mainly due to a marked dissimilarity in species composition and in the number of captures during high‐water season. In addition, bat assemblages within forest types differed significantly between seasons for both terra firme and várzea. Frugivores dominated the bat assemblages in both forest types. Overall guild structure did not change between várzea and terra firme or between seasons, but frugivore and animalivore abundance increased significantly in várzea forest during the inundation. The difference in assemblage structure observed in the high‐water season is probably caused by the annual várzea flooding, which provides an effective barrier to the persistence of many understory bats. We also hypothesize that some bat species may undertake seasonal movements between forest types in response to fruit abundance, and our results further underline the importance of floodplain habitats for the conservation of species in the Amazon.     

The contribution of edaphic heterogeneity to the evolution and diversity of Burseraceae trees in the western Amazon

Environmental heterogeneity in the tropics is thought to lead to specialization in plants and thereby contribute to the diversity of the tropical flora. We examine this idea with data on the habitat specificity of 35 western Amazonian species from the genera Protium, Crepidospermum, and Tetragastris in the monophyletic tribe Protieae (Burseraceae) mapped on a molecular-based phylogeny. We surveyed three edaphic habitats that occur throughout terra firme Amazonia: white-sand, clay, and terrace soils in eight forests across more than 2000 km in the western Amazon. Twenty-six of the 35 species were found to be associated with only one of three soil types, and no species was associated with all three habitats; this pattern of edaphic specialization was consistent across the entire region. Habitat association mapped onto the phylogenetic tree shows association with terrace soils to be the probable ancestral state in the group, with subsequent speciation events onto clay and white-sand soils. The repeated gain of clay association within the clade likely coincides with the emergence of large areas of clay soils in the Miocene deposited during the Andean uplift. Character optimizations revealed that soil association was not phylogenetically clustered for white-sand and clay specialists, suggesting repeated independent evolution of soil specificity is common within the Protieae. This phylogenetic analysis also showed that multiple cases of putative sister taxa with parapatric distributions differ in their edaphic associations, suggesting that edaphic heterogeneity was an important driver of speciation in the Protieae in the Amazon basin.     

Habitat Specialization by Birds in Western Amazonian White‐sand Forests

In the Peruvian Amazon, white‐sand forests are patchily distributed and restricted to a few localities in the North. Although recent studies have documented patterns of habitat specialization by plants in these unique forests, very few studies of the fauna of these habitats have been conducted. The species composition of the avifauna of the white‐sand forests at six localities in the region was sampled by conducting transects and point counts. Surrounding habitats were also sampled to compare avifaunal communities and to determine the degree of restriction of bird species to white‐sand habitats. Non‐metric multidimensional scaling analysis showed that bird communities of white‐sand forests were more similar to each other than they were to terra firme or flooded forest communities. Sites on either side of the Amazon‐Marañón barrier were the most similar within habitat type consistent with the hypothesis that these rivers represent a major biogeographic barrier. Twenty‐six species, belonging to 13 families, were to some degree specialized to white‐sand forests. This is the first comprehensive ornithological assessment carried out on these habitats in Peru. The high degree of habitat specialization found in these 26 bird species highlights the need for conservation and management measures that will protect white‐sand forests.     

Patterns of plant phenology in Amazonian seasonally flooded and unflooded forests

Few studies have successfully monitored community‐wide phenological patterns in seasonally flooded Amazonian várzea forests, where a prolonged annual flood pulse arguably generates the greatest degree of seasonality of any low‐latitude ecosystem on Earth. We monitored the vegetative and reproductive plant phenology of várzea (VZ) floodplain and adjacent terra firme (TF) forests within two contiguous protected areas in western Brazilian Amazonia, using three complementary methods: monthly canopy observations of 1056 individuals (TF: 556, VZ: 500), twice monthly collections from 0.5‐m² litterfall traps within two 100‐ha plots (1 TF, 1 VZ; 96 traps per plot), and monthly ground surveys of residual fruit‐fall along transect‐grids within each 100‐ha plot (12 km per plot). Surveys encompassed the entire annual flood cycle and employed a floating trap design to cope with fluctuating water levels. Phenology patterns were generally similar in both forest types. Leaffall peaked during the aquatic phase in várzea forest and the dry season in terra firme. Flowering typically followed leaffall and leaf flush, extending into the onset of the terrestrial phase and rainy season in várzea and terra firme, respectively. Abiotic seed dispersal modes were relatively more prevalent in várzea than terra firme; the main contrast in fruiting seasonality was more likely a result of differences in community composition and relative abundance of seed dispersal modes than differences within individual genera. We emphasize the difficulty in distinguishing the role of the flood pulse from other seasonal environmental variables without multiannual data or spatially replicated studies across the spectrum of Amazonian forest types.     

Inter‐annual site fidelity and breeding origins of Gray‐cheeked Thrushes in white sand forests of the Peruvian Amazon

White sand terra firme forests are unusual ecosystems scattered across Amazonia, covering just 3% of the basin. These forests differ from surrounding forests in their scleromorphic vegetation, low nutrient content, and propensity to harbor endemics. We report the capture of 62 Gray‐cheeked Thrushes (Catharus minimus) during a study of the understory avifauna of Amazonian white sand forests near Iquitos, Peru, conducted from 20 June to 8 December 2010–2012. We captured and banded Gray‐cheeked Thrushes in white sand (N = 57) and adjacent weathered clay (N = 5) terra firme forests. Sampling for three consecutive days at 19 different sites each year, the inter‐annual site fidelity rate of Gray‐cheeked Thrushes was 4.8% (N = 3). One bird banded in 2010 was recaptured in 2012. Of the 62 birds, 19.3% (N = 12) were recaptured on subsequent days. All recaptures were in white sand forests. The 19.3% recapture rate of Gray‐cheeked Thrushes from sites re‐sampled no more than 2 d in a given year suggests the presence of settled and perhaps territorial birds. Using rectrices from 12 Gray‐cheeked Thrushes, stable‐hydrogen isotope analyses (δ²H) suggest that the geographic breeding or natal origin of all sampled birds was likely northwestern North America. Our results suggest that Gray‐cheeked Thrushes exhibit site fidelity and may concentrate in white sand forests—an uncommon and scattered ecosystem type in western Amazonia. However, annual tracking of individual Gray‐cheeked Thrushes is needed to fully assess regional patterns of settlement and movement, and the connectivity between breeding and wintering areas.     

Effects of fluvial geomorphology on riparian tree species in Rekifune River,northern Japan

Classification of riverbed geomorphic surfaces based on flooding frequency was conducted and the relationship between their distribution and river morphology was analyzed, to provide an understanding of the structure and species composition of riparian forests dominated by Chosenia arbutifolia. The channel floors of two contrasting river morphologies (bar-braided and incised meandering channels), were divided into five geomorphic surfaces (gravel bar, lower and upper floodplains, secondary channel, and terrace) based on the water level of a 2-yr and a 20-yr recurrence interval. The environmental variables of the same geomorphic surfaces showed similar trends regardless of braided and meandering channel morphology, but differed significantly among the five geomorphic surfaces, which influenced the dominance of tree species. The geomorphic surface map based on recurrence interval of flood and physiognomical vegetation map based on aerial photos appeared almost identical. Geomorphic surface distribution, determined by river channel dynamics and the sediment transport processes occurring at a larger scale and a longer time frame, played an important role in shaping the structure and composition of the riparian forests. C. arbutifolia dominated gravel bar, and the upper and lower floodplains, because these geomorphic surfaces were characterized by gravelly soils which have lower soil moisture availability than soils of other geomorphic surfaces. Thus, an extensive distribution of C. arbutifolia in the braided channel section can be attributed to the frequent lateral migrations of river channels, which resulted in a high ratio of gravel bars, and lower and upper floodplains. In order to preserve indigenous plant communities in riparian zone, dynamic nature and processes of braided rivers should be maintained.     

Topography shapes the structure,composition and function of tropical forest landscapes

Topography is a key driver of tropical forest structure and composition, as it constrains local nutrient and hydraulic conditions within which trees grow. Yet, we do not fully understand how changes in forest physiognomy driven by topography impact other emergent properties of forests, such as their aboveground carbon density (ACD). Working in Borneo – at a site where 70‐m‐tall forests in alluvial valleys rapidly transition to stunted heath forests on nutrient‐depleted dip slopes – we combined field data with airborne laser scanning and hyperspectral imaging to characterise how topography shapes the vertical structure, wood density, diversity and ACD of nearly 15 km² of old‐growth forest. We found that subtle differences in elevation – which control soil chemistry and hydrology – profoundly influenced the structure, composition and diversity of the canopy. Capturing these processes was critical to explaining landscape‐scale heterogeneity in ACD, highlighting how emerging remote sensing technologies can provide new insights into long‐standing ecological questions.     

Nitrogen cycling in two riparian forest soils under different geomorphic conditions

At the floodplain scale, spatial pattern and successional development of riparian vegetation are under the control of geomorphic processes. The geomorphic and hydraulic characteristics of stream channels affect the sorting of organic material and inorganic sediment through erosion/sedimentation during floods. In turn, the proportion of fine sediments fractions differs by location within a given community of riparian forest succession. In this paper we tested the effect of geomorphic features of floodplains, through soil grain size sorting, on the nitrogen cycling in riparian forest soils. Two typical riparian forests formed by vertical accretion deposits from repeated addition of sediments from overbank flow have been chosen along the River Garonne, southwest France. These riparian forests had equivalent vegetation, flood frequency and duration, differing only in soil grain size composition: one riparian forest had sandy soils and the other had loamy soils. The evolution of the main soil physical and chemical parameters as well as denitrification (DNT), N uptake (N _U ) and mineralization (N _M ) rates were measured monthly over a period of 13 months in the two study sites. The loamy riparian forest presented a better physical retention of suspended matter during floods. Moreover,in situ denitrification rates (DNT) and N uptake by plants (N _U ) measured in the loamy riparian forest soils were significantly greater than in the sandy soils. Although DNT and N _U could be in competition for available nitrogen, the peak rates of these two processes did not occur at the same period of the year, N _U being more important during the dry season when DNT was minimum, while DNT rates were maximum following the spring floods. N retention by uptake (N _U ) and loss by DNT represented together the equivalent of 32% of total organic nitrogen deposited during floods on the sandy riparian forest soils and 70% on the loamy ones. These significant differences between the two sites show that, at the landscape level, one should not estimate the rates of N _U and DNT, in riparian forests soils only on the basis of vegetation, but should take also into account the geomorphic features of the floodplain.     

The influence of Prosopis canopies on understorey vegetation: Effects of landscape position

Abstract. The influence of canopy trees and shrubs on under‐storey plants is complex and context‐dependent. Canopy plants can exert positive, negative or neutral effects on production, composition and diversity of understorey plant communities, depending on local environmental conditions and position in the landscape. We studied the influence of Prosopis velutina (mesquite) on soil moisture and nitrogen availability, and understorey vegetation along a topographic gradient in the Sonoran Desert. We found significant increases in both soil moisture and N along the gradient from desert to riparian zone. In addition, P. velutina canopies had positive effects, relative to open areas, on soil moisture in the desert, and soil N in both desert and intermediate terrace. Biomass of understorey vegetation was highest and species richness was lowest in the riparian zone. Canopies had a positive effect on biomass in both desert and terrace, and a negative effect on species richness in the terrace. The effect of the canopy depended on landscape position, with desert canopies more strongly influencing soil moisture and biomass and terrace canopies more strongly influencing soil N and species richness. Individual species distributions suggested interspecific variation in response to water‐ vs. N‐availability; they strongly influence species composition at both patch and landscape position levels.     

Determinants of Plant Community Assembly in a Mosaic of Landscape Units in Central Amazonia: Ecological and Phylogenetic Perspectives

The Amazon harbours one of the richest ecosystems on Earth. Such diversity is likely to be promoted by plant specialization, associated with the occurrence of a mosaic of landscape units. Here, we integrate ecological and phylogenetic data at different spatial scales to assess the importance of habitat specialization in driving compositional and phylogenetic variation across the Amazonian forest. To do so, we evaluated patterns of floristic dissimilarity and phylogenetic turnover, habitat association and phylogenetic structure in three different landscape units occurring in terra firme (Hilly and Terrace) and flooded forests (Igapó). We established two 1-ha tree plots in each of these landscape units at the Caparú Biological Station, SW Colombia, and measured edaphic, topographic and light variables. At large spatial scales, terra firme forests exhibited higher levels of species diversity and phylodiversity than flooded forests. These two types of forests showed conspicuous differences in species and phylogenetic composition, suggesting that environmental sorting due to flood is important, and can go beyond the species level. At a local level, landscape units showed floristic divergence, driven both by geographical distance and by edaphic specialization. In terms of phylogenetic structure, Igapó forests showed phylogenetic clustering, whereas Hilly and Terrace forests showed phylogenetic evenness. Within plots, however, local communities did not show any particular trend. Overall, our findings suggest that flooded forests, characterized by stressful environments, impose limits to species occurrence, whereas terra firme forests, more environmentally heterogeneous, are likely to provide a wider range of ecological conditions and therefore to bear higher diversity. Thus, Amazonia should be considered as a mosaic of landscape units, where the strength of habitat association depends upon their environmental properties.     

Leaf and Soil Nutrients in a Chronosequence of Second‐Growth Forest in Central Amazonia: Implications for Restoration of Abandoned Lands

Subsistence agriculture, cattle ranching, and periodical land abandonment are common land‐use practices in Amazonia. Because changes in land use affect biogeochemical cycles, secondary forests growing after land abandonment develop at varying speeds and spatial patterns, due in part to varying nutrient dynamics. Leaf and soil nutrient concentrations can provide useful information on nutrient cycling processes and strategies of nutrient use by trees that are suitable for introduction to abandoned areas. To understand nutrient dynamics in secondary forests from different regeneration stages, as well as the importance of pioneer species in the regeneration process, we measured the concentration of macronutrients in leaves of three pioneer tree species (Vismia cayennensis, Cecropia sciadophylla, and Bellucia dichotoma) in central Amazon secondary forests. We also measured macronutrients in the topsoil under the trees. We found that type of prior land use, time since abandonment, and number of fire events were significantly correlated with the concentrations of leaf and soil macronutrients, explaining between 10 and 38% of the variation in macronutrient concentrations. The observed patterns suggest that management practices affect the processes involved in N cycling and availability. Of the three pioneer species, C. sciadophylla showed the highest nutrient resorption efficiency and the highest leaf nutritional quality. We suggest that these two features determine a higher potential of C. sciadophylla for natural regeneration and restoration of abandoned lands.     

A dynamic multi‐scale occupancy model to estimate temporal dynamics and hierarchical habitat use for nomadic species

Distribution models are increasingly being used to understand how landscape and climatic changes are affecting the processes driving spatial and temporal distributions of plants and animals. However, many modeling efforts ignore the dynamic processes that drive distributional patterns at different scales, which may result in misleading inference about the factors influencing species distributions. Current occupancy models allow estimation of occupancy at different scales and, separately, estimation of immigration and emigration. However, joint estimation of local extinction, colonization, and occupancy within a multi‐scale model is currently unpublished. We extended multi‐scale models to account for the dynamic processes governing species distributions, while concurrently modeling local‐scale availability. We fit the model to data for lark buntings and chestnut‐collared longspurs in the Great Plains, USA, collected under the Integrated Monitoring in Bird Conservation Regions program. We investigate how the amount of grassland and shrubland and annual vegetation conditions affect bird occupancy dynamics and local vegetation structure affects fine‐scale occupancy. Buntings were prevalent and longspurs rare in our study area, but both species were locally prevalent when present. Buntings colonized sites with preferred habitat configurations, longspurs colonized a wider range of landscape conditions, and site persistence of both was higher at sites with greener vegetation. Turnover rates were high for both species, quantifying the nomadic behavior of the species. Our model allows researchers to jointly investigate temporal dynamics of species distributions and hierarchical habitat use. Our results indicate that grassland birds respond to different covariates at landscape and local scales suggesting different conservation goals at each scale. High turnover rates of these species highlight the need to account for the dynamics of nomadic species, and our model can help inform how to coordinate management efforts to provide appropriate habitat configurations at the landscape scale and provide habitat targets for local managers.     

Cross‐biome transplants of plant litter show decomposition models extend to a broader climatic range but lose predictability at the decadal time scale

We analyzed results from 10‐year long field incubations of foliar and fine root litter from the Long‐term Intersite Decomposition Experiment Team (LIDET) study. We tested whether a variety of climate and litter quality variables could be used to develop regression models of decomposition parameters across wide ranges in litter quality and climate and whether these models changed over short to long time periods. Six genera of foliar and three genera of root litters were studied with a 10‐fold range in the ratio of acid unhydrolyzable fraction (AUF, or ‘lignin’) to N. Litter was incubated at 27 field sites across numerous terrestrial biomes including arctic and alpine tundra, temperate and tropical forests, grasslands and warm deserts. We used three separate mathematical models of first‐order (exponential) decomposition, emphasizing either the first year or the entire decade. One model included the proportion of relatively stable material as an asymptote. For short‐term (first‐year) decomposition, nonlinear regressions of exponential or power function form were obtained with r² values of 0.82 and 0.64 for foliar and fine‐root litter, respectively, across all biomes included. AUF and AUF : N ratio were the most explanative litter quality variables, while the combined temperature‐moisture terms AET (actual evapotranspiration) and CDI (climatic decomposition index) were best for climatic effects. Regressions contained some systematic bias for grasslands and arctic and boreal sites, but not for humid tropical forests or temperate deciduous and coniferous forests. The ability of the regression approach to fit climate‐driven decomposition models of the 10‐year field results was dramatically reduced from the ability to capture drivers of short‐term decomposition. Future work will require conceptual and methodological improvements to investigate processes controlling decadal‐scale litter decomposition, including the formation of a relatively stable fraction and its subsequent decomposition.