Identification of the Product of ndhA Gene as a Thylakoid Protein Synthesized in Response to Photooxidative Treatment

A 76 amino acid sequence of NDH-A (the protein encoded by plastidndhA gene) from barley (Hordeum vulgare L.) was expressed asa fusion protein with rß-galactosidase in E. coli.The corresponding antibody generated in rabbits was used toinvestigate localization, expression and synthesis in vitroof NDH-A. NDH-A was identified as a 35 kDa polypeptide localizedin thylakoid membrane. Western blots shows a large increasein NDH-A levels when barley leaves were incubated under photooxidativeconditions, which was more pronounced in mature-senescent leavesthan in young leaves. Immunoprecipitation of the [³⁵S]methioninelabelled proteins, synthesized in vitro by isolated chloroplasts,demonstrated the synthesis in chloroplasts of the NDH-A 35 kDapolypeptide when barley leaves had been incubated under photooxidativeconditions. The results indicate that ndh genes may be involvedin the protection of chloroplasts against photooxidative stress,particularly in mature-senescent leaves. (Received November 13, 1995; Accepted February 5, 1996)     

Juvenile Hormone Induction of the Insect Yolk Protein Precursor

In Leucophaea maderae the female specific protein, or vitellogenin,is being synthesized and secreted exclusively by the adult femalefat bodies. This specific protein, which is induced by thejuvenilehormones makes up approximately 90% of the total yolk proteins.It is a lipophosphoprotein of low phosphorus (0.14) content.The female specific protein is synthesized on polysomes boundto membranes of the ergastoplasmic reticulum (ER). Microsomevesicles obtained from active tissues are heavily studded withribosomes and are considerably more dense than those from "inactive"tissues. The nascent polypeptide chains of the vitellogeninare secreted into the cisternae of the ER and can be releasedby Na deoxycholate digestion of the membranes. Similarly, thenon-specific serum proteins are also secreted into the cisternaeof the ER. All evidence points to the fact that microsomes maycarry mixed populations of polysomes, those associated withspecific and those associated with non-sex-specific proteinsynthesis. The significance of the polysomal association withmembranes for the synthesis of exportable sex-specific proteinis discussed.     

Differences in the incorporation of [3H]-glucosamine into nascent polypeptide chains on free polysomes and two fractions of membrane-bound polysomes in mouse myeloma cells

The incorporation of [³H]-glucosamine into polypeptides of three fractions of polysomes in MPC-11 cells was studied. After short term incubation greatest incorporation was observed in a fraction of membrane-bound polysomes, which after nitrogen cavitation of cells, remained bound to the endoplasmic reticulum (ER) associated with the nucleus (fraction 2). Polypeptide chains on membrane-bound polysomes in the microsomal fraction (fraction 1) and free polysomes contained much less radioactivity. Since nascent polypeptide chains contained within membrane-bound polysomes of fraction 2 are glycosylated at an earlier stage than those in fraction 1 it is likely that this represents a difference in type of proteins synthesized in the respective fractions of ER.     

PROTEIN SYNTHESIS BY CEREBRAL POLYSOMES PRETREATED WITH PUROMYCIN

Abstract— Polysomes prepared from rat cerebral microsomes, following preincubation with a high concentration of puromycin (2.5 mM) in the presence of rat liver soluble enzymes, were very similar to normal polysomes in yield, A 260_nm:A 280_nm ratio and in absorbance profile on sucrose density gradients. However, the capacity for amino acid incorporation was inhibited by more than 50 per cent by puromycin treatment. The extent of inhibition far exceeded what could be expected from the amount of residual puromycin bound to polysomes, suggesting that some essential step in polypeptide synthesis was damaged. An examination of the labelled polypeptides, using sucrose density gradient centrifugation, showed that most of the new chains synthesized by puromycin-polysomes were released into solution. However, small amounts of polypeptides of high specific radioactivity were distributed among the polysomal aggregates. In contrast to normal polysomes, the specific radioactivity of puromycin polysomes was the highest in aggregates of six or more ribosomes and declined sharply at the levels of trimers and dimers. It is suggested that cerebral polysomes pretreated with puromycin become defective in the termination mechanism with the consequence that even though they are capable of moving at least short distances on the messenger RNA and of releasing the polypeptide chains formed, a concomittant release of monomeric ribosomes is obstructed. This may result in the‘clogging’of the terminus of the mRNA, thus blocking further polypeptide synthesis.     

Sampling of the leucine pool from the growing peptide chain: difference in leucine specific activity of peptidyl-transfer RNA from free and membrane-bound polysomes.

The specific activity of leucine in newly synthesized protein was determined by isolating the nascent polypeptides of the growing polypeptide chains. The newt, Triturus viridescens, was labeled in vivo with [³H]leucine. Polysomes were prepared from the livers. Peptidyl-tRNA was released from the polysomes by EDTA, isolated by sucrose gradient and purified on hydroxylapatite. It was then hydrolyzed with HCl and the amino acids were reacted with ¹⁴C-labeled 1fluoro-2,4-dinitrobenzene. The specific activity of [³H]leucine was determined from the [¹⁴C]dinitrophenyl-[³H]leucine after purification by two-dimensional thin layer chromatography. By this approach we found twofold differences between leucine specific activity in the growing polypeptide chain of free polysomes and that of membrane-bound polysomes. Moreover, we recorded eight to tenfold differences between the specific activity of leucine in peptidyl-tRNA and that in the acid-soluble pool. Our results indicate and define the intracellular compartmentalization of the leucine pool available for protein synthesis.     

The termination of the synthesis of proteins in vitro with extracts from the undeveloped cyst of Artemia salina

Soluble fractions (S-100) from both undeveloped cysts and developing embryos of Artemia salina promoted elongation of polypeptides initiated in vivo on polysomes of developing embryos or nauplius larvae. The ability of the extract from the undeveloped cyst to terminate correctly the synthesis of polypeptides has been determined indirectly from the distribution of polysomes before and after in vitro translation and, more directly, from the nature of the protein product released from rabbit reticulocyte polysomes. The extract from the undeveloped cyst and also, as expected, that from the developing embryo catalyzed a reduction in the amount of the polysomes of larger size and an increase in the amount of 80 S ribosomes. The soluble extract from the undeveloped cyst can terminate the synthesis of rabbit globin on reticulocyte polysomes. The major polypeptide product released from the polysomes had an electrophoretic mobility identical with that of the subunit of isolated rabbit globin. This indicated that the cyst contained the components necessary to complete and terminate the synthesis of polypeptides correctly and that the released protein product was not predominantly as a result of premature chain termination. The size distribution of Artemia salina proteins released from polysomes from developing embryos was similar when the synthesis was directed by the S-100 at each stage of development.     

Chimaeras of the Rubisco Large Subunit from Wheat and Anacystis do not Assemble into Active Enzyme in E. coli

A new restriction site was engineered in the cloned gene codingfor the large subunit polypeptide of ribulose 1, 5-bisphosphatecarboxylase (Rubisco) of the cyanobacterium Anacystis nidulans.This change resulted in the mutation of a phenylalanine residueto an isoleucine residue in the encoded polypeptide but hadno effect on the assembly or biochemical properties of Rubiscocontaining the polypeptide. The mutation was in a loop regionlinking highly structured domains at the N and C termini ofthe complete large subunit. Using the new restriction site, and a corresponding EcoRl restrictionsite in the cloned gene for the native large subunit polypeptideof wheat Rubisco, chimaeric genes were made encoding the polypeptidewith either the 140 residues of the N-terminal part of the wheatlarge subunit fused to the 336 residues forming the C-terminalregion of the A. nidulans large subunit, or the alternativeof 136 residues comprising of the N-terminal chains of A. nidulanssubunit and the 338 residue chain at the C-terminus of the wheatlarge subunit polypeptide. The chimaeric proteins expressedin E. coli, together with the small subunit of the A. nidulansRubisco, formed an insoluble inactive aggregate mainly in inclusionbodies. The possible reasons for the failure to obtain activeholoenzyme are discussed. Key words: Rubisco, protein engineering, site-directed mutagenesis     

Specificity of factors isolated from free polysomes and microsomes on in vitro protein synthesis in plasmacytoma cells

A simple procedure for measuring chain initiation in complete in vitro systems is described. The capacity of free and membrane-bound polysomes prepared by a detergent technique or by nitrogen cavitation to incorporate radioactive amino acids into proteins was compared with the capacity of these polysomes to initiate polypeptide chains.The extent of amino acid incorporation by polysomes prepared by either of these methods did not differ significantly. However, chain initiation determined by measuring the incorporation of radioactive subunits into polysomes showed that polysomes prepared by the detergent technique were less effective than polysomes made by nitrogen cavitation in chain initiation.Crude initiation factors, prepared by washing either free polysomes or microsomes with 0.5 M KCl, stimulated chain initiation and amino acid incorporation by both types of polysomes. Free polysomes were stimulated almost to the same extent by factors isolated from free polysomes or microsomes. Membrane-bound polysomes on the other hand showed a specific requirement for microsomal factors.The extent of stimulation by crude polysomal factors was dependent on the concentration of high speed supernatant in the assay system.     

Polysome-dependent synthesis of embryonic proteins of Artemia salina during cell differentiation and analysis of heme-containing protein.

The polysomes isolated from the different developmental stages of Artemia salina have been translated in a homologous S-30 extract or pH 5 enzyme fraction as well as in a heterologous (wheat germ) pH 5 enzyme fraction. The specific template activity of the polysomes increases linearly up to a stage which is equivalent to about two-thirds of the whole preemergence period and thereafter remains rather constant until the nauplius stage. The specific template activity of the polysomes appears to be dependent on a source of in vitro systems, but not to be dependent on the size of the polysomes used. Moreover, the efficiency of polypeptide chain release from the polysomes in vitro also seems dependent on the developmental stages of the embryos, but in this case it is not influenced by the in vitro system employed. Analysis of the proteins synthesized in vitro by the polyacrylamide gel electrophoresis has revealed that the species and their relative amounts of the proteins are rather specific for each developmental stage analyzed.Heme-containing proteins from the nauplii have been partially purified and analyzed. This heme-protein complex contains two distinct polypeptide chains, MW > 100,000 and MW = 50,000–60,000 daltons, respectively, as the major species as judged by SDS-polyacrylamide gel electrophoresis. During preemergence development, no heme-protein complexes have been detected, but after hatching of the embryos, they have been detected.     

The study of spermidine-stimulated polypeptide synthesis in cell-free translation of mRNA from lactating mouse mammary gland

The stimulatory effect of spermidine on the translation of poly(A)⁺ mRNA from lactating mouse mammary glands in a wheat germ system was studied. Spermidine stimulated total polypeptide synthesis about 2.5-fold relative to that occurring in the presence of an optimal concentration of Mg²⁺ alone. The size and the number of polysomes were about 1.6-times larger in the presence of spermidine than in its absence. A similar magnitude of increase in peptide chain initiation, 1.4-fold, was found when the extent of peptide chain initiation was measured by determining the residual polypeptide synthesis subsequent to the addition of inhibitor(s) of peptide chain initiation to the in vitro translation system with or without spermidine at various times of the incubation. Time-course study of the release of polypeptide from polysomes showed that spermidine stimulated this process to a much greater extent than peptide chain initiation, indicating that the polyamine also increases the rate of peptide chain elongation. The extent of stimulation of peptide chain elongation by spermidine was estimated to be about 1.5-fold when the disappearance of isotope-labeled nascent peptides from polysomes was measured by pulse-chase experiments. These results indicate that spermidine stimulates the cell-free translation of mammary mRNA by increasing the rates of both initiation and elongation of polypeptide synthesis to almost the same extent. The polyamine also reduced the relative amount of incomplete polypeptides, thereby increasing the yield of full-length translational products.     

Synthesis of metallothionein in a polysomal cell-free system.

A new covalent chromatography system utilizing Activated Thiol Sepharose 4B was employed to quantitate the content of thionein chains synthesized in a polysomal cell-free system. Liver polysomes from zinc injected rats directed the translation of more thionein-like polypeptide chains than polysomes from control rats. The increase was similar to the stimulation in MT synthesis $\text{in vivo}$ following a zinc injection. This evidence supports the concept that metallothionein synthesis is regulated by changes in the pool of translatable thionein mRNA.     

Polypeptide Composition of Envelope Membranes Isolated from Chloroplasts of C3, C4, and CAM Plants

Chloroplast envelopes were isolated from chloroplasts purifiedfrom Spinacea oleracea L. (C₃), Panicum miliaceum L. (NAD-malicenzyme-type C₁), Digitaria sanguinalis (L.) Scop. (NADP-malicenzyme-type C₄), Kalanchoe daigremontiana Hamet et Perrier (constitutiveCAM), and from Mesembryanthemum crystallinum L. (inducible CAM)performing either C₃ photosynthesis or Crassulacean acid metabolism(CAM). For each species, methods were developed to isolate chloroplastenvelopes free of thylakoid contamination. The polypeptidesof ribulose bisphosphate (RuBP) carboxylase which has been consistentlyreported in envelope preparations of spinach were not foundin envelope preparations of C₄ mesophyll chloroplasts. Silverstaining of envelope polypeptides resolved electrophoreticallyon sodium dodecylsulfate polyacrylamide gradient slab gels produceda more complex profile than did Coomassie staining which haspreviously been used with C₃ envelope preparations, even thoughsilver reacted poorly with polypeptides corresponding to thesubunits of RuBP carboxylase. All of the plants examined possesseda major polypeptide of 27 to 29 kilodaltons (kD) which was previouslysuggested to be the phosphate translocator in spinach. WithC₃ M. crystallinum, the 29 kD polypeptide stained most intensely.After induction of CAM, a 32 kD polypeptide also stained intensely,giving a profile similar to that obtained with the constitutiveCAM species. A 32 kD polypeptide was also prominent in C₄ envelopepreparations, suggesting that a 32 kD polypeptide may be a translocatorprotein which is required in Crassulacean acid metabolism andC4 photosynthesis, but not in C₃ photosynthesis. (Received April 25, 1983; Accepted July 9, 1983)     

The Isolation and Characterization of a Cytochrome b6f Complex from the Cyanobacterium Spirulina sp.

A cytochrome b₆f complex was isolated and purified from Spirulinasp. The complex was solubilized with n-heptyl ß-D-thioglucosideand chromatographed on a DEAE-Toyopearl 650M column. The purifiedcomplex contained a small amount of chlorophyll and carotenoid.At least four polypeptides were present in the complex: cytochromef (29 kDa), cytochrome b₆(23 kDa), iron-sulfur protein (ISP,23 kDa), and a 17 kDa polypeptide. Each polypeptide was separatedfrom the complex treated with 2-mercaptoethanol or urea. Theabsorption spectra of cytochrome b₆ and cytochrome f were similarto those of Anabaena and spinach as expected. The complex wasactive in supporting ubiquinol-cytochrome c oxidoreductase activity.Fifty percent inhibition of the activity was accomplished by1 µM dibromothymoquinone (DBMIB). The K_m values for ubiquinol-2and cytochrome c (horse heart) were 5.7 µM and 7.4 µM,respectively. (Received August 15, 1988; Accepted November 14, 1988)     

Helical polysomes induced by aflatoxin B1 in vivo : A new hypothesis for helix formation by chemicals and carcinogens

We have studied the induction of helical polysomes by aflatoxin B₁ in liver and kidney cells from rat and mouse. We succeeded in giving to reticulocyte polysomes a shape resembling helices after in vitro treatment with O-methylthreonine which is used as an inhibitor of polypeptide chain termination. From this and knowing the site of action of aflatoxin B₁ on rat liver polysomes, we hypothesize that the induction of helical polysomes in tissues from adult animals treated by chemicals or carcinogens is due to the inhibition of release of ribosomes from the messenger RNA (mRNA). Theoretical studies of protein synthesis inhibition are in agreement with this new hypothesis.     

Inhibition of ribosomal translocation by aminoglycoside antibiotics.

The translocation of AcPhe-tRNA in a purified system and that of peptidyl-tRNA in a crude, complete polypeptide synthesizing system containing endogenous $\text{E. coli}$ polysomes are inhibited by antibiotics of the neomycin, kanamycin and gentamicin groups. The extent of inhibition varies with the different antibiotics, but it correlates well with the capacity of each antibiotic to inhibit polypeptide chain elongation. Thus, the inhibition of translocation by these antibiotics is clearly significant for their inhibitory effect on polypeptide synthesis.     

Monocistronic messenger RNA in yeast

We have determined the rate of polypeptide chain synthesis on different size polysomes in yeast. The completion time for the average polypeptide chain in vivo at 23 °C is two minutes by this technique and is in good agreement with values we have determined by other independent methods.These kinetic experiments indicate that the average size of a nascent polypeptide chain on a polysome is directly related to the size of the polysome. This demonstrates that in the simple eucaryotic organism, Saccharomyces cerevisiae, mRNA is monocistronic in the sense that each mRNA molecule codes for one protein molecule which is released intact from the ribosome upon completion. The pattern of amino acid incorporation into Escherichia coli polysomes is distinctly different. These findings have a number of interesting implications for the genetics of the lower eucaryotes and indicate that the cellular mechanisms of control and co-ordination in yeast may differ from those found in procaryotes and may be similar to cellular mechanisms of control for mammalian cells.     

Localization and Characterization of a Novel 20 kDa Polypeptide in the Chloroplast of the Green Alga Dunaliella salina

Recent work with the green alga Dunaliella salina showed thepresence of a {small tilde}20 kDa chloroplast protein that wasrecognized by polyclonal antibodies raised against the isolatedLHC-II [Webb M.R. and Melis A. (1995) Plant Physiol. 107: 885].In this report, a characterization of the {small tilde}20 kDapolypeptide is presented. It is shown that it is localized inthe chloroplast envelope membrane of D. salina. The abundanceof this protein is constant on a per cell basis and independentof the light regime during cell growth. The {small tilde}20kDa polypeptide is easily degraded to a {small tilde}19 kDaproduct during sample preparation. A limited amino acid sequenceof 21 residues from the free N-terminus of the {small tilde}19kDa product was obtained. On the basis of this partial sequence,it was concluded that the {small tilde}20 kDa polypeptide isnot a degradation product of a known LHC-II but rather a novelprotein. The {small tilde}20kDa polypeptide did not cross-reactwith antibodies raised against the Cbr (carotene biosynthesis-related)gene product and showed a different electrophoretic mobilityfrom the latter. Light-shift experiments suggest that the {smalltilde}20 kDa polypeptide is not an ELIP (early light-inducibleprotein). Possible functions of the {small tilde}20 kDa proteinare discussed. ¹Permanent address: Department of Biochemistry, University oflund, PO Box 124, S-221 00 Lund, Sweden