Seedling herbivory, community composition and plant life history traits

Despite the voluminous literature documenting plant-animal interactions, it is only recently that ecologists have begun to focus upon the importance of seedling herbivory in plant communities. This review aims to synthesize our current understanding of the effect that selective seedling removal by herbivores has in shaping post-disturbance plant community structure. In order to do this I describe how individual seedling and plant community characteristics influence the likelihood of seedling herbivory. I argue that seedling palatability, size and morphology, together with the frequency, distribution and timing of seedling emergence all play a significant role in determining seedling regeneration success in the face of herbivore attack. I also outline how current plant defence theories can be related to recent field observations concerning seedling acceptability and removal. In addition, I suggest that those seedling characteristics which provide the emerging plant with some degree of resistance against herbivory should be viewed as one component of a suite of plant life history traits affecting seedling regeneration success or failure. In view of the increasing importance of comparative methods in plant ecology, I propose that future research should integrate seedling acceptability with other plant life history traits thought to affect seedling regeneration. Recent work suggests that seed size may be paramount in determining regeneration success. I explore the possibility that seed size and seedling acceptability may be linked and discuss how these two factors may interact along successional gradients in plant communities.     

Flooding × tree fall gap interactive effects on blackwater forest floristics and physical structure in the Peruvian Amazon

To better understand how flooding and tree fall structure forests in the Amazon, I sampled vegetation plots within three blackwater forests (least flooded, medium flooded, highest flooded) and their tree fall gaps in the Peruvian Amazon. I found (1) increased flooding decreased family richness in the closed-canopy forests but increased it in their gaps, with no trends for no. of unique species, (2) flooding decreased stem size everywhere as did the number of stems as size increased especially for larger stems, (3) Green's index showed clumping only for least-flooded forests with the closed-canopy forest showing more than its tree fall gap, and (4) both flooding and tree fall gap creation decreased canopy coverage perhaps as an additive effect. Further among the stem size classes, only the smallest stems were significantly affected by openness and by type of forest, with a significant interaction term where flooding significantly decreased the number of these smaller stems in all forests and their gaps, except those with the highest level of flooding. Also tree fall gaps had significantly more, smaller stems than their forests in the two most-flooded forests, but not in the least-flooded forest. I conclude that flooding is a greater stressor and influence on the structure of these forests than tree fall, and so, in these forests, gradients and disturbances overlap in their traditional roles.     

Effects of increased flooding on riparian vegetation: Field experiments simulating climate change along five European lowland streams

In many parts of the world, the magnitude and frequency of cold‐season precipitation are expected to increase in the near future. This will result in an increased magnitude and duration of winter and spring flooding by rain‐fed streams and rivers. Such climate‐driven increases in flooding are likely to affect riparian plant communities, but future vegetation changes are hard to predict due to current lack of data. To fill this knowledge gap, we experimentally modified the hydrology of five streams across three countries in north‐western Europe during late winter/early spring over a period of 3 years. We assessed the responses in riparian plant species richness, biomass, plant‐available nitrogen and phosphorus and seed deposition to increased flooding depth (+18 cm on average at the lowest positions along the riparian gradient) and prolonged flooding duration (6 weeks on average). After 3 years of increased flooding, there was an overall decline in riparian species richness, while riparian plant biomass increased. Extractable soil nitrogen and phosphorus also increased and are likely to have contributed to the increased biomass. Increased flooding resulted in the arrival of more seeds of additional species to the riparian zone, thereby potentially facilitating the shifts in riparian plant species composition we observed. The results of our concerted experimental effort demonstrate that changes in stream riparian plant communities can occur rapidly following increased winter flooding, leading to strong reductions in plant species diversity.     

Predicting co-distribution patterns of parrots and woody plants under global changes: The case of the Lilac-crowned Amazon and Neotropical dry forests

Global climate and land-use changes are the most significant causes of the current habitat loss and biodiversity crisis. Although there is information measuring these global changes, we lack a full understanding of how they impact community assemblies and species interactions across ecosystems. Herein, we assessed the potential distribution of eight key woody plant species associated with the habitat of the endangered Lilac-crowned Amazon (Amazon finschi) under global changes scenarios (2050′s and 2070′s), to answer the following questions: (1) how do predicted climate and land-use changes impact these species’ individual distributions and co-distribution patterns?; and (2) how effective is the existing Protected Area network for safeguarding the parrot species, the plant species, and their biological interactions? Our projections were consistent identifying the species that are most vulnerable to climate change. The distribution ranges of most of the species tended to decrease under future climates. These effects were strongly exacerbated when incorporating land-use changes into models. Even within existing protected areas, >50 % of the species’ remaining distribution and sites with the highest plant richness were predicted to be lost in the future under these combined scenarios. Currently, both individual species ranges and sites of highest richness of plants, shelter a high proportion (ca. 40 %) of the Lilac-crowned Amazon distribution. However, this spatial congruence could be reduced in the future, potentially disrupting the ecological associations among these taxa. We provide novel evidence for decision-makers to enhance conservation efforts to attain the long-term protection of this endangered Mexican endemic parrot and its habitat.     

结构稳定性: 概念、方法和应用

群落内物种间相互作用的结构是高度组织化的。群落结构对多物种共存的影响机制是群落生态学的核心科学问题之一。目前生态学界在这一问题上存在多种不同的观点。一个可能的原因是, 由于环境因子的复杂性, 大部分研究忽略了环境因子对群落结构和物种共存的重要影响。在这一背景下, 近期发展起来的结构稳定性理论系统地联系了群落结构、环境因子和物种共存, 并在此基础上建立了一个和经验数据紧密结合的理论框架。本文首先简要回顾了当前关于群落结构研究的争鸣, 然后介绍了结构稳定性的理论框架和计算方法, 最后详细介绍了结构稳定性理论在不同生态群落和不同生态学问题中的应用。在全球气候变化的背景下, 结构稳定性理论提供了一种新的视角来理解群落层面的生物多样性维持机制。     

Impacts of future climate scenarios on hypersaline habitats and their conservation interest

This study is focused on determining the response behaviour of five saline plant communities to two environmental variables: flooding and salinity. Also, total soil organic carbon, diversity, plant cover and vegetation height were measured. Once this behaviour is known, the impacts of future climate scenarios may be approached. Since some of these variables could be altered by climate change, the future vegetation dynamics might indicate the trending of change, so plant communities can be used as bioindicators. The investigation was carried out in some small coastal wetlands located in a semiarid Mediterranean region. Low values of diversity were found in these plant communities due to a great effect of flooding, followed by salinity. ‘Reed beds’ are bioindicators of flooding and environmental disturbance. ‘Saline rushes’ are also flooding bioindicators and efficient accumulators of organic matter. ‘Mediterranean halophilous scrubs’ are bioindicators of seasonal flooding and changes to salinity. ‘Mediterranean halo-nitrophilous scrubs’ might be considered as bioindicators of low flooding and low salinity in anthropic environment while ‘Mediterranean salt steppes’ bioindicate driest conditions. At present, Mediterranean halophilous scrubs are the most widely extended community, which could be interpreted as a consequence of a changing and sharply seasonal climate. Our research suggests that future climate change scenarios involving flooding increases would support the proliferation of the lowest diversity and thus lower ecological value plant communities (i.e. reed beds). Conversely, a future scenario of decreasing flooding would benefit the most diverse and valuable conservation community actually priortized by European Habitats Directive (Mediterranean salt steppes, Limonietalia).     

Eco-evolutionary dynamics in herbivorous insect communities mediated by induced plant responses

It is increasingly recognized that the ecology of communities and evolution of species within communities are interdependent, and researchers have been paying attention to this rapidly emerging field of research, i.e., through studies on eco-evolutionary dynamics. Most of the studies on eco-evolutionary dynamics have been concerned with direct trophic interactions. However, community ecologists have shown that trait-mediated indirect effects play an important role in shaping the structure of natural communities. In particular, in terrestrial plant–insect systems, indirect effects mediated through herbivore-induced plant responses are common and have a great impact on the structure of herbivore communities. This review describes eco-evolutionary dynamics in herbivorous insect communities, and specifically focuses on the key role of herbivore-induced plant responses in eco-evolutionary dynamics. First, I review studies on the evolution of herbivore traits relevant to plant induction and discuss evolution in a community context mediated by induced plant responses. Second, I highlight how intraspecific genetic variation or evolution in herbivore traits can influence herbivore community structure. Finally, I propose the hypothetical model that induced plant responses supports eco-evolutionary feedback in herbivore communities. In this review, I argue that the application of the indirect interaction web approaches into studies on eco-evolutionary will provide profound insights into understanding of mechanisms of the generation and maintenance of biodiversity.     

Tree species distribution in<Emphasis Type="Italic">Várzea</Emphasis> forests of Brazilian Amazonia

Amazonian várzea forests are floodplains inundated by nutrient-rich white-water rivers occurring along the Amazon River. They are regularly flooded for up to 210 days per year by water columns of 10–15 m. Topographic variation results in different flooding amplitudes and durations along the flooding gradient, where the different tolerance to flooding of different plant species results in a vegetation zonation. We made a review of literature about the vegetation composition ofvárzea floodplain forests of Brazilian Amazonia along the Amazon River. Twenty-two studies were selected. Basing on the distribution of inventories which are concentrated in three main areas around the three larger cities Belém, Manaus and Tefé, we classified the inventories into three regions: (A) Estuary region with flooding regime influenced by daily inundations linked to the tides; (B) Central Amazonia near Manaus; (C) Western part of Brazilian Amazonia bordering Peru and Colombia, including Tefé and the “Reserva de Desenvolvimento Sustentável Mamirauá”. Summarizing the analyzed species lists, 36 tree species were registered in all sampled regions including the estuary. The regions A +C have 63 species in common, region B+C 143, and A+B 50. In the inventories analyzed here, an increase in species numbers from East to West can be confirmed, but it is difficult to state whether this is not an artefact due to local sampling. Vertical zonation patterns are difficult to discuss due to the lack of comparable data. The inventoried areas are small, and there is an urgent need for comparable floristic inventories throughout the basin. Destruction is spreading rapidly and the traditional use of forests and its resources is changing to a destructive exploitation that already has changed much of the physiognomy and diversity of this unique ecosystem.     

Interactive effects of flooding and forest gap formation on tree composition and abundance in the Peruvian Amazon

In order to better understand how flooding and gap formation affect Amazonian rainforests, I set up plots both in three major forest types that differed by flooding duration (referred to here as dry, wet, very wet) and in their respective gaps. Sampling of those plots after 4 years of regeneration showed: (1) common species exist between wet forests and their gaps and between wet and very wet gaps, (2) tree richness is maximum in dry forest and minimum in very wet gaps except in the wet gaps that show the second highest number of species, (3) there were less stems in gaps compared to forests and less stems in forests as flooding increased, except again in the wet gaps, and (4) dominance-diversity curves have more dominance by single species in the dry gap plots compared to other gaps and in dry forest compared to other forests. In general while some aspects of structure such as tree stem density is largely determined by tree-fall gap dynamics, tree composition is determined by flooding regime. Finally a jump in tree richness in wet forests and wet gaps compared to other plots suggests a “mass effects” hypothesis where species from dry and very wet forest and gaps have overlapping ranges in the wet forest and gap. This effect may help explain the high species diversity seen in this part of the Amazon.     

Natural hybridization and conservation

This review deals with natural hybridization, an important subject in conservation biology. Natural hybridization is defined as the secondary contact between two populations that have evolved separately over a long period of time. This process is uncommon in terms of the total number of individuals involved, but is much less unusual if we consider the number of species that hybridize. Thus, natural hybridization may be an important process in the shaping of the evolutionary trajectories of many plant and animal species. The possible consequences of natural hybridization, which can either promote or prevent evolutionary divergence between taxa and will involve many ecological factors, are analysed here. I question whether natural hybridization poses always a problem in conservation and try to answer when conservation biologists and managers do have a responsibility to take decisions. Several examples of hybridization related to management strategies are also discussed. In conclusion, I believe that it is impossible to provide conservation managers with a simple handbook explaining how to proceed in cases of hybridization––each case is unique and should be analyzed individually. The only advice is that the more we know about hybridization and the factors involved, the better we will be able to assess each situation, to establish the possible consequences and even to estimate the probability of success of any particular conservation strategy.     

植物竞争研究进展

竞争系指两个以上有机体或物种间阻碍或制约的相互关系。它是塑造植物形态、生活史的主要动力之一;并对植物群落的结构和动态具有深刻的影响。因其在生态学的中心地位,生态学家已从不同的侧面研究了这一复杂的生态学现象;生态学也因此而得到了发展。然而,人们对竞争的理解不尽一致,因而导致了概念上的混乱,平行研究相对缺乏、不同研究间的比较困难,从而阻碍了学科的发展。本文试就植物竞争的概念、竞争理论、竞争研究的实验方法、影响竞争能力的主要因素、种内和种间竞争对种群和群落的影响,如竞争与物种共存等进行综述;我们在总结研究成就的同时,亦指出了现有研究的局限性。     

Ecological assembly rules in plant communities—approaches,patterns and prospects

Understanding how communities of living organisms assemble has been a central question in ecology since the early days of the discipline. Disentangling the different processes involved in community assembly is not only interesting in itself but also crucial for an understanding of how communities will behave under future environmental scenarios. The traditional concept of assembly rules reflects the notion that species do not co‐occur randomly but are restricted in their co‐occurrence by interspecific competition. This concept can be redefined in a more general framework where the co‐occurrence of species is a product of chance, historical patterns of speciation and migration, dispersal, abiotic environmental factors, and biotic interactions, with none of these processes being mutually exclusive. Here we present a survey and meta‐analyses of 59 papers that compare observed patterns in plant communities with null models simulating random patterns of species assembly. According to the type of data under study and the different methods that are applied to detect community assembly, we distinguish four main types of approach in the published literature: species co‐occurrence, niche limitation, guild proportionality and limiting similarity. Results from our meta‐analyses suggest that non‐random co‐occurrence of plant species is not a widespread phenomenon. However, whether this finding reflects the individualistic nature of plant communities or is caused by methodological shortcomings associated with the studies considered cannot be discerned from the available metadata. We advocate that more thorough surveys be conducted using a set of standardized methods to test for the existence of assembly rules in data sets spanning larger biological and geographical scales than have been considered until now. We underpin this general advice with guidelines that should be considered in future assembly rules research. This will enable us to draw more accurate and general conclusions about the non‐random aspect of assembly in plant communities.     

Habitat conversion and galling insect richness in tropical rainforests under mining effect

Human-induced habitat change is the main cause of species loss and can have severe effects on plant communities and the associated herbivore fauna. In this study, we investigated the effects of habitat conversion due to mining on communities of galling insects in areas of tropical rainforest in the Brazilian Amazon. We sampled galling insects in the Floresta Nacional de Saracá Taquera, Pará, Brazil, where forest plateaus are used by the Mineração Rio do Norte Group to extract bauxite. Our results show that human-induced habitat change via mining activities increased the local species richness of galling insects. We also found that after impact there was greater species richness of galling insects closer to the forest edge than in the forest interior. Changes in plant physiology and in the diversity of natural enemies in human-modified habitats, along with the endophagous life-form, might account for the high incidence of galling in human-disturbed habitats. This result highlights the importance of understanding how different insect groups respond to human activities, since such idiosyncrasies might have profound effects on the species’ patterns of ecological interactions and in the outcomes of those interactions.     

Effect of river size on Amazonian primate community structure: A biogeographic analysis using updated taxonomic assessments

The mechanisms that underlie the diversification of Neotropical primates remain contested. One mechanism that has found support is the riverine barrier hypothesis (RBH), which postulates that large rivers impede gene flow between populations on opposite riverbanks and promote allopatric speciation. Ayres and Clutton-Brock (1992) demonstrated that larger Amazonian rivers acted as barriers, delineating the distribution limits of primate species. However, profound changes in taxonomy and species concepts have led to the proliferation of Neotropical primate taxa, which may have reduced support for their results. Using the most recent taxonomic assessments and distribution maps, we tested the effect of increasing river size on the similarity of opposite riverbank primate communities in the Amazon. First, we conducted a literature review of primate taxonomy and developed a comprehensive spatial database, then applied geographical information system to query mapped primate ranges against the riverine geography of the Amazon watershed to produce a similarity index for opposite riverbank communities. Finally, we ran models to test how measures of river size predicted levels of similarity. We found that, almost without exception, similarity scores were lower than scores from Ayres and Clutton-Brock (1992) for the same rivers. Our model showed a significant negative relationship between streamflow and similarity in all tests, and found river width significant for the segmented Amazon, but not for multiple Amazon watershed rivers. Our results support the RBH insofar as they provide evidence for the prediction that rivers with higher streamflow act as more substantial barriers to dispersal, and accordingly exhibit greater variation in community composition between riverbanks.     

Oligarchies in Amazonian tree communities: a ten‐year review

This paper revisits various hypotheses about oligarchic patterns in Amazonian tree communities put forward by Pitman et al. (2001) . Together, these hypotheses predict that most lowland sites in the Amazon are located within large patches of relatively homogeneous edaphic and other environmental conditions, where an oligarchy of common, frequent tree species accounts for a majority of trees. To assess the degree to which these hypotheses have been corroborated or refuted over the last ten years, we reviewed > 200 studies published since 2001. We found overwhelming support for the hypo thesis that large‐scale oligarchies of common and frequent species are a common feature of Amazonian tree communities. At least 22 studies have documented oligarchies in Amazonian woody plant communities to date, and no studies have looked for oligarchies as defined by Pitman et al. (2001) and failed to find them. We argue that six publications that offer critiques of the oligarchy hypothesis do not constitute valid tests. The other hypotheses in Pitman et al. (2001) – one regarding the specific oligarchic taxa that dominate forests near the eastern base of the Andes and one that attempts to explain why oligarchic species exist – are less well supported by the literature, in large part because they have not been subjected to many tests. We discuss links between these hypotheses and other well‐known patterns and hypotheses in ecology (the abundance–occupancy relationship, the Janzen–Connell hypothesis, the niche‐environment hypothesis, and the niche breadth hypothesis), and provide additional detail to facilitate rigorous tests in the future. The paper concludes by presenting remote sensing evidence that large patches of relatively homogeneous environmental conditions account for most of the upland forest landscape across Amazonian Peru.     

Plant–microbe interactions at multiple scales across a high-elevation landscape

Here we review the numerous studies of plant–microbe interactions conducted at the Niwot Ridge LTER site in Colorado, USA. By synthesising work at scales ranging from the rhizosphere to the landscape, we offer a mechanistic view of how these interactions are essential to understanding the spatial and temporal structuring of plant and microbial communities across this diverse and changing landscape. These new insights are also important for making predictions about how both plant and microbial communities and populations will respond to future changes in this environment, especially with regard to the potential uphill movement of plants and microbes in response to climate change and nitrogen deposition. We predict that the uphill movement of plants and microbes will be especially apparent, and have the most impact, in areas of the alpine that are now mostly plant free. These areas are currently undergoing a shift from a microbe-dominated ecosystem to one where microbe–plant interactions will play a critical role in reducing nutrient losses to downstream ecosystems.     

Positive Interactions： Crucial Organizers in a Plant Community

For more than a century, ecologists have concentrated on competition as a crucial process for community organization. However, more recent experimental investigations have uncovered the striking Influence of positive Interactions on the organization of plant communities. Complex combinations of competition and positive interactions operating simultaneously among plant species seem to be widespread In nature. In the present paper, we reviewed the mechanism and ecological importance of positive Interactions In plant communities, emphasizing the certainties and uncertainties that have made It an attractive area of research. Positive Interactions, or facilitation, occur when one species enhances the survival, growth, or richness of another. The Importance of facilitation in plant organization increases with ablotlc stress and the relative Importance of competition decreases. Only by combining plant interactions and the many fields of biology can we fully understand how and when the positive Interactions occur.     

Effects of raised water levels on wet grassland plant communities

Questions: What are the effects of raised water levels on wet grassland plant communities and dynamics? To what extent do time since raised water levels, vegetation management and water regime influence community composition? Location: Pevensey Levels, southeast England, UK. Methods: Plant communities and hydrology were monitored during 2001‐03 within 23 wet grassland meadows and pastures where water levels had been raised for nature conservation at different times over 21 years. Community variations were examined using species abundance and ecological traits. Results: Water regime, measured as duration of flooding, groundwater level and soil moisture was significantly related to plant community variation. Communities were divided into grasslands where inundation was shallow (≤8 cm) and relatively short (≤3 months) and sites where deeper flooding was prolonged (≥5 months), supporting a variety of wetland vegetation. With increasing wetness, sites were characterised by more bare ground and wetland plants such as sedges, helophytes and hydrophytes, and species with a stress‐tolerating competitive strategy. All sites showed considerable annual dynamics, especially those with substantially raised water levels. There were no significant relationships between time since water levels were raised and plant community composition. Grassland management exerted a limited influence upon vegetation compared to water regime. Conclusions: Grassland plant communities are responsive to raised water levels and have potential for a rapid transition to wetland vegetation, irrespective of grazing or cutting management. Creation or restoration of wet grasslands by (re)wetting is feasible but challenging due to the high dynamism of wetland plant communities and the need for substantially raised water levels and prolonged flooding to produce significant community changes.     

Shedding light on shade: ecological perspectives of understorey plant life

Shade, in ecological sense, is not merely a lack of light, but a multi-faceted phenomenon that creates new and complex settings for community and ecosystem dynamics. Tolerating shade therefore affects plants’ ability to cope with other stressors, and also shape its interactions with surrounding organisms. The aim of this broad review was to map our current knowledge about how shade affects plants, plant communities and ecosystems – to gather together knowledge of what we know, but also to point out what we do not yet know. This review covers the following topics: the nature of shade, and ecological and physiological complexities related to growing under a canopy; plants’ capability of tolerating other stress factors while living under a shade – resource trade-offs and polytolerance of abiotic stress; ontogenetic effects of shade tolerance; coexistence patterns under the canopy – how shade determines the forest structure and diversity; shade-induced abiotic dynamics in understorey vegetation, including changing patterns of irradiance, temperature and humidity under the canopy; shade-driven plant–plant and plant–animal interactions – how shade mediates facilitation and stress, and how it creates differentiated environment for different herbivores and pollinators, including the role of volatile organic compounds. We also discuss the ways how vegetation in understorey environments will be affected by climate change, as shade might play a significant role in mitigating negative effects of climate change. Our review shows that living under a shade affects biotic and abiotic stress tolerance of plants, it also influences the outcomes of both symbiotic and competitive plant–plant and plant–animal interactions in a complex and dynamic manner. The current knowledge of shade-related mechanisms is rather ample, however there is much room for progress in integrating different implications of the multifaceted nature of shade into consistent and integral understanding how communities and ecosystems function.