Mass Spectrometry-based Quantitative Proteomic Profiling of Human Pancreatic and Hepatic Stellate Cell Lines

The functions of the liver and the pancreas differ; however, chronic inflammation in both organs is associated with fibrosis. Evidence suggests that fibrosis in both organs is partially regulated by organ-specific stellate cells. We explore the proteome of human hepatic stellate cells (hHSC) and human pancreatic stellate cells (hPaSC) using mass spectrometry (MS)-based quantitative proteomics to investigate pathophysiologic mechanisms. Proteins were isolated from whole cell lysates of immortalized hHSC and hPaSC. These proteins were tryptically digested, labeled with tandem mass tags (TMT), fractionated by OFFGEL, and subjected to MS. Proteins significantly different in abundance (P < 0.05) were classified via gene ontology (GO) analysis. We identified 1223 proteins and among them, 1222 proteins were quantifiable. Statistical analysis determined that 177 proteins were of higher abundance in hHSC, while 157 were of higher abundance in hPaSC. GO classification revealed that proteins of relatively higher abundance in hHSC were associated with protein production, while those of relatively higher abundance in hPaSC were involved in cell structure. Future studies using the methodologies established herein, but with further upstream fractionation and/or use of enhanced MS instrumentation will allow greater proteome coverage, achieving a comprehensive proteomic analysis of hHSC and hPaSC.     

Endocrine Cell Clustering During Human Pancreas Development

The development of efficient, reproducible protocols for directed in vitro differentiation of human embryonic stem (hES) cells into insulin-producing β cells will benefit greatly from increased knowledge regarding the spatiotemporal expression profile of key instructive factors involved in human endocrine cell generation. Human fetal pancreases 7 to 21 weeks of gestational age, were collected following consent immediately after pregnancy termination and processed for immunostaining, in situ hybridization, and real-time RT-PCR expression analyses. Islet-like structures appear from approximately week 12 and, unlike the mixed architecture observed in adult islets, fetal islets are initially formed predominantly by aggregated insulin- or glucagon-expressing cells. The period studied (7–22 weeks) coincides with a decrease in the proliferation and an increase in the differentiation of the progenitor cells, the initiation of NGN3 expression, and the appearance of differentiated endocrine cells. The present study provides a detailed characterization of islet formation and expression profiles of key intrinsic and extrinsic factors during human pancreas development. This information is beneficial for the development of efficient protocols that will allow guided in vitro differentiation of hES cells into insulin-producing cells. (J Histochem Cytochem 57:811–824, 2009)     

人胰腺细胞培养及胰岛素的分泌

人胰腺细胞培养及胰岛素的分泌王石泉,汤国枝,张鹤云,李敏意,金以丰（南京大学生物化学系,南京２１００９３）胰岛β细胞的体外培养获得胰岛素已有报道,但大多采用新生大鼠胰腺,且β细胞成活率低,分泌量少,还处在研究阶段［１－４］．本实验采用人胰腺细胞做较大...     

Merkel Cell Distribution in the Human Eyelid

Although Merkel cell carcinoma of the eyelid is reported frequently in the literature, only limited information exists about the distribution of Merkel cells in this tissue. Therefore, serial sections of 18 human cadaver eyelids (donors ages ranging between 63 and 97 years) were stained for cytokeratin 20 in various planes. The overall appearance of Merkel cells in these samples was low and mainly located in the outer root layer of the cilia hair follicles. Merkel cells were more frequent in the middle, and almost not detectable at the nasal and temporal edges. The localization is in accordance with that of Merkel cell carcinoma, but concerning the scarce appearance within this adulthood group, a specific physiological role of these cells in the eyelid is difficult to establish.Key words: eyelid, human, cytokeratin 20, Merkel cell     

Chaperones Ameliorate Beta Cell Dysfunction Associated with Human Islet Amyloid Polypeptide Overexpression

In type 2 diabetes, beta-cell dysfunction is thought to be due to several causes, one being the formation of toxic protein aggregates called islet amyloid, formed by accumulations of misfolded human islet amyloid polypeptide (hIAPP). The process of hIAPP misfolding and aggregation is one of the factors that may activate the unfolded protein response (UPR), perturbing endoplasmic reticulum (ER) homeostasis. Molecular chaperones have been described to be important in regulating ER response to ER stress. In the present work, we evaluate the role of chaperones in a stressed cellular model of hIAPP overexpression. A rat pancreatic beta-cell line expressing hIAPP exposed to thapsigargin or treated with high glucose and palmitic acid, both of which are known ER stress inducers, showed an increase in ER stress genes when compared to INS1E cells expressing rat IAPP or INS1E control cells. Treatment with molecular chaperone glucose-regulated protein 78 kDa (GRP78, also known as BiP) or protein disulfite isomerase (PDI), and chemical chaperones taurine-conjugated ursodeoxycholic acid (TUDCA) or 4-phenylbutyrate (PBA), alleviated ER stress and increased insulin secretion in hIAPP-expressing cells. Our results suggest that the overexpression of hIAPP induces a stronger response of ER stress markers. Moreover, endogenous and chemical chaperones are able to ameliorate induced ER stress and increase insulin secretion, suggesting that improving chaperone capacity can play an important role in improving beta-cell function in type 2 diabetes.     

Pancreatic Polypeptide Is Recognized by Two Hydrophobic Domains of the Human Y4 Receptor Binding Pocket

Structural characterization of the human Y₄ receptor (hY₄R) interaction with human pancreatic polypeptide (hPP) is crucial, not only for understanding its biological function but also for testing treatment strategies for obesity that target this interaction. Here, the interaction of receptor mutants with pancreatic polypeptide analogs was studied through double-cycle mutagenesis. To guide mutagenesis and interpret results, a three-dimensional comparative model of the hY₄R-hPP complex was constructed based on all available class A G protein-coupled receptor crystal structures and refined using experimental data. Our study reveals that residues of the hPP and the hY₄R form a complex network consisting of ionic interactions, hydrophobic interactions, and hydrogen binding. Residues Tyr^2.64, Asp^2.68, Asn^6.55, Asn^7.32, and Phe^7.35 of Y₄R are found to be important in receptor activation by hPP. Specifically, Tyr^2.64 interacts with Tyr²⁷ of hPP through hydrophobic contacts. Asn^7.32 is affected by modifications on position Arg³³ of hPP, suggesting a hydrogen bond between these two residues. Likewise, we find that Phe^7.35 is affected by modifications of hPP at positions 33 and 36, indicating interactions between these three amino acids. Taken together, we demonstrate that the top of transmembrane helix 2 (TM2) and the top of transmembrane helices 6 and 7 (TM6–TM7) form the core of the peptide binding pocket. These findings will contribute to the rational design of ligands that bind the receptor more effectively to produce an enhanced agonistic or antagonistic effect.     

SILAC-Based Quantitative Proteomic Analysis of Human Lung Cell Response to Copper Oxide Nanoparticles

Copper (II) oxide (CuO) nanoparticles (NP) are widely used in industry and medicine. In our study we evaluated the response of BEAS-2B human lung cells to CuO NP, using Stable isotope labeling by amino acids in cell culture (SILAC)-based proteomics and phosphoproteomics. Pathway modeling of the protein differential expression showed that CuO NP affect proteins relevant in cellular function and maintenance, protein synthesis, cell death and survival, cell cycle and cell morphology. Some of the signaling pathways represented by BEAS-2B proteins responsive to the NP included mTOR signaling, protein ubiquitination pathway, actin cytoskeleton signaling and epithelial adherens junction signaling. Follow-up experiments showed that CuO NP altered actin cytoskeleton, protein phosphorylation and protein ubiquitination level.     

人组织激肽释放酶基因在哺乳动物细胞中的表达

克隆人胰腺组织激肽释放酶基因 (hKK) ,构建融合荧光蛋白基因的真核表达载体 ,在CHO细胞中表达 ,为开发激肽释放酶基因工程产品以及开展基因治疗高血压研究奠定了基础。提取人胰腺组织总RNA后 ,RT PCR扩增KK ,构建中间载体KSKK。从KSKK中切出激肽释放酶基因 ,插入真核表达载体pEGFP C2 ,构建出激肽释放酶带有荧光蛋白报告基因的表达载体pEGC KK ,测序分析后转染CHO细胞 ,荧光显微镜观察激肽释放酶基因表达。并进行SDS PAGE及Westernblot分析。成功克隆激肽释放酶基因 ,并在CHO细胞获得表达 ,克隆的人组织激肽释放酶基因可用于激肽释放酶基因工程产品开发以及基因治疗研究。     

定量RT-PCR中人干细胞因子的RNA-CRS的构建

一种适用于定量RT-PCR、用ExonucleaseⅢ部分酶切剔除技术,构建人干细胞因子(hSCF)基因的RNA竞争性参考标准(RNA-CRS)的新方法：用RT-PCR技术,从HepG2细胞中扩增出全长人hSCF cDNA,并克隆入质粒pGEM-T获重组的pGEMSCF载体,经ExonucleaseⅢ和S1核酸酶适当处理,以导致hSCF cDNA中一小片段缺失,由此获得重组pGEMSCF模拟体(mimic),经体外转录得到hSCF RNA-CRS.测序表明：该RNA-CRS与hSCF mRNA比较,缺失了从第499位至608位共110个核苷酸,但二者RT-PCR反应可用同一对扩增引物,反应动力学极为相似.这种hSCF RNA-CRS可作为一种较理想的竞争性参考标准,适用于定量RT-PCR中,以对重组hSCF在真核细胞中的表达水平进行准确的定量分析.此方法亦可推广应用于其他真核基因的表达水平及/或调控的检测和研究.     

Quantitative Analysis of Actinomyces Cell Walls

Quantitative data on the amino acid composition of cell walls of five species of Actinomyces were obtained by using a Beckman-Spinco amino acid analyzer. The major amino acids in A. israelii, A. naeslundii, A. eriksonii, and A. bovis species included alanine, glutamic acid, lysine, aspartic acid, and ornithine, as reported by previous workers, whereas A. propionicus contained diaminopimelic acid. Other amino acids, including glycine, valine, leucine, proline, isoleucine, and threonine, were present in at least some of the walls in quantities equal to or slightly less than that of lysine. This raised the question of whether these may represent cross-links in the peptidoglycan or other cell wall structural components or whether the wall preparations contained nonpeptidoglycan material despite the use of electron microscopy as a standard of purity; further work is required to supply the answer. The quantitative data furnish relative molar concentrations of amino acids, which can provide definitive identification of some of the species and differentiation of Actinomyces from other members of the Actinomycetales and from morphologically similar genera such as Corynebacterium and Propionibacterium.     

An Immunochemical Analysis of the Distribution of a Brain-Specific Polypeptide, PEP-19

Immunochemical and immunohistochemical techniques were used to map the tissue distribution and cellular localization of a rat brain-specific polypeptide, termed PEP-19. PEP-19 was found to be abundant in the cerebellum and olfactory bulbs but was present at much lower levels in other gross brain regions. It was undetectable in all nonneural tissues examined but was present in the cerebellum of several vertebrates, including rat, mouse, guinea pig, monkey, and human. Immunohistochemical analysis revealed that PEP-19 was localized to the soma, axon, and dendritic processes of rat cerebellar Purkinje cells with no demonstrable immunoreactivity in nonneuronal cell types. Furthermore, mutant mice showing degeneration of Purkinje cells exhibit markedly decreased levels of PEP-19. Because PEP-19 appears during the final stages of maturation of Purkinje cells, it may be utilized as a probe to monitor the development of these neurons in vivo.     

Isolation,Culture, and Imaging of Human Fetal Pancreatic Cell Clusters

For almost 30 years, scientists have demonstrated that human fetal ICCs transplanted under the kidney capsule of nude mice matured into functioning endocrine cells, as evidenced by a significant increase in circulating human C-peptide following glucose stimulation^1-9. However in vitro, genesis of insulin producing cells from human fetal ICCs is low¹⁰; results reminiscent of recent experiments performed with human embryonic stem cells (hESC), a renewable source of cells that hold great promise as a potential therapeutic treatment for type 1 diabetes. Like ICCs, transplantation of partially differentiated hESC generate glucose responsive, insulin producing cells, but in vitro genesis of insulin producing cells from hESC is much less robust^11-17. A complete understanding of the factors that influence the growth and differentiation of endocrine precursor cells will likely require data generated from both ICCs and hESC. While a number of protocols exist to generate insulin producing cells from hESC in vitro^11-22, far fewer exist for ICCs^10,23,24. Part of that discrepancy likely comes from the difficulty of working with human fetal pancreas. Towards that end, we have continued to build upon existing methods to isolate fetal islets from human pancreases with gestational ages ranging from 12 to 23 weeks, grow the cells as a monolayer or in suspension, and image for cell proliferation, pancreatic markers and human hormones including glucagon and C-peptide. ICCs generated by the protocol described below result in C-peptide release after transplantation under the kidney capsule of nude mice that are similar to C-peptide levels obtained by transplantation of fresh tissue⁶. Although the examples presented here focus upon the pancreatic endoderm proliferation and β cell genesis, the protocol can be employed to study other aspects of pancreatic development, including exocrine, ductal, and other hormone producing cells.     

肿瘤细胞迁移特性及细胞迁移能力表征

细胞运动特征及其变化主要受细胞自身状况和微环境二方面的影响,细胞适应不同环境的运动响应方式存在差异,在二维培养基质上细胞迁移方式主要分为个体迁移和群体迁移,而在三维培养基质中其迁移模式主要为间充质迁移和阿米巴迁移.肿瘤细胞因其结构功能状况异常,在上述环境中的迁移特征出现不同程度的异化,其主要倾向为顽固、无目的和侵袭性的迁移运动.对细胞的迁移能力进行量化表征,有助于对细胞迁移本质的进一步认识.根据细胞培养环境的不同,分别介绍了二维和三维培养基质上细胞的不同迁移模式及肿瘤细胞的迁移运动特征,以及测量细胞迁移能力的体外测试手段和方法,并分析总结了这些方法的优缺点.