Variability of mitochondrial DNA cytochrome <Emphasis Type="Italic">b</Emphasis> gene in the red vole <Emphasis Type="Italic">Clethrionomys rutilus</Emphasis> Pallas, 1779, population in the flood-plain middle stream of the Kolyma River

The intrapopulation variability of a cytochrome b gene fragment and the corresponding amino acid sequence was studied in the red vole Clethrionomys rutilus Pallas, 1779 from the flood-plain of the Kolyma River. Wide polymorphic variability of these properties was observed. Differences in the cytochrome b gene sequence were determined between the red voles of the studied population and the species collected in neighborhoods of Novosibirsk and Omsk. The revealed results point to the urgency of the cytochrome b gene nucleotide sequence and the variants of the respective amino acid sequence as genetic markers of originality of different red vole populations.     

Microsatellite markers confirm extensive population fragmentation of the endangered Balkan palaeoendemic Martino’s vole (<Emphasis Type="Italic">Dinaromys bogdanovi</Emphasis>)

The Martino’s vole is an endangered rodent endemic to the western Balkan Peninsula. Its range is fragmented, and populations are small due to high habitat specificity. The level of genetic variation within such populations is often low, and genetic differentiation between patchily dispersed populations is high. By scoring eight microsatellite loci in 110 individual Martino’s voles originating from 27 locations throughout the species range, we analysed genetic variation at both the intra- and interpopulation level. Factorial correspondence analysis, Bayesian analyses, and allele sharing distances divided individuals into three phylogroups (Northwestern, Central, and Southeastern), thus providing independent support for phylogeographic structuring, a pattern that has been described in previous studies based on mitochondrial DNA. Spatial genetic analyses showed that populations are highly fragmented, even in those areas with the highest population densities. The highest intrapopulation genetic variability and stable effective population sizes were found in Mount Zelengora (Bosnia and Herzegovina), which harbours a relatively large population of Martino’s voles. Populations in the Central and Southeastern lineages exhibited a significant isolation-by-distance pattern, indicating limited gene flow between them. Contrary to previous opinion, low effective population size and very limited gene flow between remaining populations suggest that the long-term existence of the Martino’s vole might not be secure, even in populations that live in optimal habitats. The only threat to the Martino’s vole identified thus far is competitive exclusion by the European snow vole. However, our results suggest that conservation problems associated with this paleoendemic rodent are more complex.     

Long-term pattern of population dynamics in the field vole from central Europe: cyclic pattern with amplitude dampening

The subject of population cycles is regarded as controversial due to a number of unsettled questions such as whether or not cyclic patterns are governed by the same processes at high and low latitudes in Europe. Recent evidence suggests that the dynamics at high and low latitudes share the common temporal pattern of vole dynamics referred to as collapsing population cycles. Despite concurrent interest, the key contention around the causal mechanisms that drive population cycles remains a hot topic in ecology. The aims of this study are to supplement information on the seasonal population dynamics of the field vole Microtus agrestis in the Czech Republic by analysing 25 years of time series data. By applying robust estimation procedures, we estimated several parameters to describe population dynamics, such as population variability, amplitude dampening, cycle period, order of the dynamics and the structure of density dependence. The parameters indicate that field vole dynamics in central Europe are highly variable, cyclic dynamics of order two, with peaks in abundance occurring regularly at intervals of 4–5 years. In addition to exhibiting population cycles, the field vole populations show a pattern of dampened amplitude as observed elsewhere in Europe, including northern latitudes. By analysing temporal trends in seasonal abundances, population growth rates and environmental temperatures, we did not obtain evidence to support the hypothesis that amplitude dampening results from the negative effect of increasingly mild winters on winter population growth rates.     

Distribution and parameters of genetic polymorphism in northern red-backed vole (<Emphasis Type="Italic">Clethrionomys rutilus</Emphasis>) and bank vole (<Emphasis Type="Italic">Clethrionomys glareolus</Emphasis>) in West Siberia

This article presents data on the genetic variability of the northern red-backed vole and the bank vole that live sympatrically in West Siberia. The two species of voles have comparable, relatively high indices of genetic variability of inter simple sequences repeats DNA. The proportion of polymorphic DNA markers is 95–98%, and the Nei’s genetic diversity index is 0.33–0.35. A total of 47–58% of allozyme loci in the voles are polymorphic, and the average heterozygosity per locus is 0.058 in the northern red-backed vole and 0.054 in the bank vole. Interpopulation differentiation is less pronounced in the red-backed vole (F _ST 0.293) compared to the bank vole (F _ST 0.475). Individuals of the hybrid line of the bank vole with the mitochondrial haplotype of the red-backed vole have been found by PCR typing of cytochrome b gene fragment of mtDNA. The distribution boundary of the hybrid line of bank voles goes farther to the northeast than was shown in earlier works. The proportion of hybrid specimens range from 2 to 34%. The indices of genetic variability in the hybrid line of the bank vole are lower than those of the parental species.     

Regulation of vole populations by the nematode <Emphasis Type="Italic">Trichuris arvicolae</Emphasis>: insights from modelling

The goal of this study is to determine whether a parasitic nematode may regulate, or destabilise by inducing demographic cycles, its host populations. We explore three host–parasite systems through population dynamic models. The hosts considered are the fossorial water vole, Arvicola terrestris, the common vole Microtus arvalis and the bank vole Myodes (Clethrionomys) glareolus and the parasitic nematode is Trichuris arvicolae. Three differential equation-based mathematical models are developed including host immunity and the existence of trade-off between immunity and host survival. Using parameters estimated from field data and laboratory observations, all these models show that T. arvicolae can induce host population regulation but not demographic cycles. The regulation effect of the nematode is un-ambiguous for the water vole (reduction of 50.2% of the host population size), but less obvious for the common vole (5.9%) and even less for the bank vole (1.4%). Important biological parameters to be taken into account in such models are discussed. Experimental confirmation of the regulatory potential of the nematode and of the costs of mounting an immune response against this nematode are now required. Communicated by W. Lutz     

Genetic structure of Brandt’s vole (<Emphasis Type="Italic">Lasiopodomys brandtii</Emphasis>) populations in Inner Mongolia,China, based on microsatellite analysis

Brandt’s vole (Lasiopodomys brandtii) distribution is discontinuous in Inner Mongolia with some populations isolated from others. Recently, some isolated populations have suffered extinction, and the factors responsible remain elusive. Genetic drift is one of the processes affecting population genetic differentiation, and can play a substantial role in the divergence of small, isolated populations. Using seven microsatellite markers, we genotyped four geographically isolated populations of Brandt’s vole, all of which exhibit episodic fluctuations in population density. The results showed a strong genetic differentiation among the geographically distinct populations (total F _ST = 0.124) and in particular, one population (Zhengxiangbaiqi) was isolated from all others (F _ST values were greatest between Zhengxiangbaiqi and other populations). Furthermore, high levels of inbreeding (F _IS values ranged from 0.205 to 0.290) within each distinct population suggest that inbreeding has and is likely occurring in Brandt’s vole populations. These processes can decrease average individual fitness and consequently increase the risk of extinction of the species.     

Morphometric and allozyme variation in central and southern Greek populations ofMicrotus (Terricola) thomasi

The endemic Balkan vole taxonMicrotus (Terricola) thomasi (Barrett-Hamilton, 1903) exhibits great karyological variability in Greece. In this study, populations belonging to two different karyotypic forms (‘atticus’ and ‘thomasi’) are examined both morphometrically and electrophoretically. A total of 140 individuals ofM. (T.) thomasi were collected from 6 localities of south and central Greece. For the morphometric analysis, 27 variables (external body and cranial characters) were examined and evaluated according to multivariate analyses (PCA, MANOVA, CVA and CLUS). For the electrophoretic analysis, 18 putative genetic loci were examined and the allozymic data were treated by the biostatistical package BIOSYS-1. According to the results obtained, all the populations studied show little overall morphometric variability, whereas they are characterized by high electrophoretic variability. The populations studied are not grouped according to the karyotypic form. In almost all the cases, in the two UPGMA-dendrograms plotted according to morphometric and electrophoretic distances (Mahalanobis’ and Nei’s distances, respectively), the populations branching together belong to different karyotypic forms. Conclusively, the morphometric and electrophoretic results of this study revealed that the two karyotypic forms should not be considered separate species or subspecies, as it has been proposed by some authors in the past, and the populations studied can be considered only as different local populations of the rather variable vole speciesM. (T.) thomasi.     

Site occupancy response to natural and anthropogenic disturbances of root vole: Conservation problem of a vulnerable relict subspecies

Changes in habitat quality, destruction and fragmentation of the remaining habitats are the main causes of population and species extinction. Patch occupancy decreases with the turnover of the metapopulation dynamics and therefore the population prone to extinct. We have been examining the occurrence of endangered and strictly protected Hungarian root vole subspecies (Microtus oeconomus mehelyi) within the framework of Hungarian Biodiversity Monitoring System Program in Kis-Balaton. We analyzed the dynamics of root vole site occupancy based on 12-year-long period data. From a conservation aspect we investigated how root vole site occupancy dynamics differed in the area under NATURA 2000 protected marshland habitat management and in the privatized marshland under regular perturbation, compared to the initial, disturbance-free conditions. We applied multi-season occupancy models and we took into consideration the effects of perturbance, such as burning and mowing, and natural disturbances such as water cover and weather (wetter, drier weather period). Based on monitoring data there were 397 successful root vole captures and we identified 262 individuals. The results of both detection and occupancy estimates showed that the comprehensive mowing affecting the entire privatized area appeared as a disturbing effect, causing the emigration of the root voles. Most important factor in the loss of root vole is the additive effects of burning and natural aridity. Disturbances and perturbations of certain areas induce movements and spatial translocations which play role in the exchange of genes and individuals, ensuring to maintain the genetic variability of the remaining relict population.     

Cyclicity and variability in prey dynamics strengthens predator numerical response: the effects of vole fluctuations on white stork productivity

Theory predicts that optimality of life-long investment in reproduction is, among other factors, driven by the variability and predictability of the resources. Similarly, during the breeding season, single resource pulses characterized by short periods and high amplitudes enable strong numerical responses in their consumers. However, it is less well established how spatio-temporal dynamics in resource supplies influence the spatio-temporal variation of consumer reproduction. We used the common vole (Microtus arvalis)—white stork (Ciconia ciconia) resource—consumer model system to test the effect of increased temporal variation and periodicity of vole population dynamics on the strength of the local numerical response of storks. We estimated variability, cycle amplitude, and periodicity (by means of direct and delayed density dependence) in 13 Czech and Polish vole populations. Cross-correlation between annual stork productivity and vole abundance, characterizing the strength of the local numerical response of storks, increased when the vole population fluctuated more and population cycles were shorter. We further show that the onset of incubation of storks was delayed during the years of higher vole abundance. We demonstrate that high reproductive flexibility of a generalist consumer in tracking the temporal dynamics of its resource is driven by the properties of the local resource dynamics and we discuss possible mechanisms behind these patterns.     

Barn Owl Productivity Response to Variability of Vole Populations

We studied the response of the barn owl annual productivity to the common vole population numbers and variability to test the effects of environmental stochasticity on their life histories. Current theory predicts that temporal environmental variability can affect long-term nonlinear responses (e.g., production of young) both positively and negatively, depending on the shape of the relationship between the response and environmental variables. At the level of the Czech Republic, we examined the shape of the relationship between the annual sum of fledglings (annual productivity) and vole numbers in both non-detrended and detrended data. At the districts’ level, we explored whether the degree of synchrony (measured by the correlation coefficient) and the strength of the productivity response increase (measured by the regression coefficient) in areas with higher vole population variability measured by the s-index. We found that the owls’ annual productivity increased linearly with vole numbers in the Czech Republic. Furthermore, based on district data, we also found that synchrony between dynamics in owls’ reproductive output and vole numbers increased with vole population variability. However, the strength of the response was not affected by the vole population variability. Additionally, we have shown that detrending remarkably increases the Taylor’s exponent b relating variance to mean in vole time series, thereby reversing the relationship between the coefficient of variation and the mean. This shift was not responsible for the increased synchrony with vole population variability. Instead, we suggest that higher synchrony could result from high food specialization of owls on the common vole in areas with highly fluctuating vole populations.     

Landscape genetics highlights the role of bank vole metapopulation dynamics in the epidemiology of Puumala hantavirus

Rodent host dynamics and dispersal are thought to be critical for hantavirus epidemiology as they determine pathogen persistence and transmission within and between host populations. We used landscape genetics to investigate how the population dynamics of the bank vole Myodes glareolus, the host of Puumala hantavirus (PUUV), vary with forest fragmentation and influence PUUV epidemiology. We sampled vole populations within the Ardennes, a French PUUV endemic area. We inferred demographic features such as population size, isolation and migration with regard to landscape configuration. We next analysed the influence of M. glareolus population dynamics on PUUV spatial distribution. Our results revealed that the global metapopulation dynamics of bank voles were strongly shaped by landscape features, including suitable patch size and connectivity. Large effective size in forest might therefore contribute to the higher observed levels of PUUV prevalence. By contrast, populations from hedge networks highly suffered from genetic drift and appeared strongly isolated from all other populations. This might result in high probabilities of local extinction for both M. glareolus and PUUV. Besides, we detected signatures of asymmetric bank vole migration from forests to hedges. These movements were likely to sustain PUUV in fragmented landscapes. In conclusion, our study provided arguments in favour of source‐sink dynamics shaping PUUV persistence and spread in heterogeneous, Western European temperate landscapes. It illustrated the potential contribution of landscape genetics to the understanding of the epidemiological processes occurring at this local scale.     

The effect of habitat hydrology on intraspecific competition,settlement structure,and reproduction in the water vole (<Emphasis Type="Italic">Arvicola terrestris</Emphasis>)

Analysis of long-term monitoring of the water vole population in Northern Baraba Lowland (Ubinskii raion, Novosibirsk oblast) has revealed correlation between flow intensity of the Om’ River in the study area and population numbers and population dynamics (estimated May through August), average number of live embryos in overwintered females, and percentage of mature young-of-the-year females in different years of study.     

Movement patterns of a specialist predator,the weasel<Emphasis Type="Italic">Mustela nivalis</Emphasis> exploiting asynchronous cyclic field vole<Emphasis Type="Italic">Microtus agrestis</Emphasis> populations

We investigated habitat selection and movement characteristics of male weaselsMustela nivalis Linnaeus, 1766 during the breeding season through radio-telemetry in Kielder Forest (KF) in order to assess how weasel movement is influenced by prey dynamics, mate searching and predation risk, and whether the scale of weasel movement corresponds to the spatial scale of the asynchronous, multi-annual vole population cycles observed in KF. Weasels used habitats with a high proportion of grass cover to a much larger extend than habitats with less grass cover and moved through the latter habitats faster and / or straighter. Habitats with high amounts of grass cover also had the highest field vole abundance, although total rodent abundance did not differ between habitats. The selection of this habitat by weasels might reflect weasels preferring field voles as prey or avoiding habitats with little grass cover and high intraguild predation risk. Five out of 8 male weasels radio-tracked had low day-to-day site fidelity and moved between different clear cuts. Three other males were resident in a single clear cut. This variation may reflect mate searching by male weasels. The observation that most weasels (5 out of 8) roamed over large areas and the scale of their dispersal potential suggests, that if they regulated vole populations, they should have a greater synchronising effect on the spatial scale of vole population dynamics than what is observed in vole populations in KF.     

Temporally stable genetic variability and dynamic kinship structure in a fluctuating population of the root vole Microtus oeconomus

Genetic variability, kin structure and demography of a population are mutually dependent. Population genetic theory predicts that under demographically stable conditions, neutral genetic variability reaches equilibrium between gene flow and drift. However, density fluctuations and non‐random mating, resulting e.g. from kin clustering, may lead to changes in genetic composition over time. Theoretical models also predict that changes in kin structure may affect aggression level and recruitment, leading to density fluctuations. These predictions have been rarely tested in natural populations. The aim of this study was to analyse changes in genetic variability and kin structure in a local population of the root vole (Microtus oeconomus) that underwent a fourfold change in mean density over a 6‐year period. Intensive live‐trapping resulted in sampling 88% of individuals present in the study area, as estimated from mark–recapture data. Based on 642 individual genotypes at 20 microsatellite loci, we compared genetic variability and kin structure of this population between consecutive years. We found that immigration was negatively correlated with density, while the number of kin groups was positively correlated with density. This is consistent with theoretical predictions that changes in kin structure play an important role in population fluctuations. Despite the changes in density and kin structure, there was no genetic differentiation between years. Population‐level genetic diversity measures did not significantly vary in time and remained relatively high (H_E range: 0.72–0.78). These results show that a population that undergoes significant demographic and social changes may maintain high genetic variability and stable genetic composition.     

Limits to genetic bottlenecks and founder events imposed by the Allee effect

The Allee effect can result in a negative population growth rate at low population density. Consequently, populations below a minimum (critical) density are unlikely to persist. A lower limit on population size should constrain the loss of genetic variability due to genetic drift during population bottlenecks or founder events. We explored this phenomenon by modeling changes in genetic variability and differentiation during simulated bottlenecks of the alpine copepod, Hesperodiaptomus shoshone. Lake surveys, whole-lake re-introduction experiments and model calculations all indicate that H. shoshone should be unlikely to establish or persist at densities less than 0.5–5 individuals m⁻³. We estimated the corresponding range in minimum effective population size using the distribution of habitat (lake) sizes in nature and used these values to model the expected heterozygosity, allelic richness and genetic differentiation resulting from population bottlenecks. We found that during realistic bottlenecks or founder events, >90% of H. shoshone populations in the Sierra Nevada may be resistant to significant changes in heterozygosity or genetic distance, and 70–75% of populations may lose <10% of allelic richness. We suggest that ecological constraints on minimum population size be considered when using genetic markers to estimate historical population dynamics.     

Beyond average: an experimental test of temperature variability on the population dynamics of <Emphasis Type="Italic">Tribolium confusum</Emphasis>

The relationship between ectotherm ecology and climatic conditions has been mainly evaluated in terms of average conditions. Average temperature is the more common climatic variable used in physiological and population studies, and its effect on individual and population-level processes is well understood. However, the intrinsic variability of thermal conditions calls attention to the potential effects that this variability could have in ecological systems. Regarding this point, two hypotheses are proposed. From the allocation principle, it may be inferred that if temperature variability is high enough to induce stress in the organisms, then this extra-cost should reduce the energetic budget for reproduction, which will be reflected in population parameters. Moreover, a mathematical property of non-linear functions, Jensen’s inequality, indicates that, in concave functions, like the temperature–reproduction performance function, variability reduces the expected value of the output variable, and again modifies population parameters. To test these hypotheses, experimental cultures of Tribolium confusum under two different thermal variability regimens were carried out. With these data, we fitted a simple population dynamics model to evaluate the predictions of our hypothesis. The results show that thermal variability reduces the maximum reproductive rate of the population but no other parameters such as carrying capacity or the nonlinear factor in a nonlinear version of the Ricker model, which confirms our hypotheses. This result has important consequences, such as the paradoxical increase in population variability under a decrease in thermal variability and the necessary incorporation of climatic variability to evaluate the net effect of climate change on the dynamics of natural populations.     

Role of individual dispersal in genetic resilience in fluctuating populations of the gray‐sided vole Myodes rufocanus

Population densities of the gray‐sided vole Myodes rufocanus fluctuate greatly within and across years in Japan. Here, to investigate the role of individual dispersal in maintaining population genetic diversity, we examined how genetic diversity varied during fluctuations in density by analyzing eight microsatellite loci in voles sampled three times per year for 5 years, using two fixed trapping grids (approximately 0.5 ha each). At each trapping session, all captured voles at each trapping grid were removed. The STRUCTURE program was used to analyze serially collected samples to examine how population crashes were related to temporal variability, based on local‐scale genetic compositions in each population. In total, 461 and 527 voles were captured at each trapping grid during this study. The number of voles captured during each trapping session (i.e., vole density) varied considerably at both grids. Although patterns in fluctuations were not synchronized between grids, the peak densities were similar. At both grids, the mean allele number recorded at each trapping session was strongly, positively, and nonlinearly correlated with density. STRUCTURE analyses revealed that the proportions of cluster compositions among individuals at each grid differed markedly before and after the crash phase, implying the long‐distance dispersal of voles from remote areas at periods of low density. The present results suggest that, in gray‐sided vole populations, genetic diversity varies with density largely at the local scale; in contrast, genetic variation in a metapopulation is well‐preserved at the regional scale due to the density‐dependent dispersal behaviors of individuals. By influencing the dispersal patterns of individuals, fluctuations in density affect metapopulation structure spatially and temporally, while the levels of genetic diversity are preserved in a metapopulation.     

Food deprivation in the common vole (<Emphasis Type="Italic">Microtus arvalis</Emphasis>) and the tundra vole (<Emphasis Type="Italic">Microtus oeconomus</Emphasis>)

Arvicolinae voles are small herbivores relying on constant food availability with weak adaptations to tolerate prolonged food deprivation. The present study performed a comparative analysis on the responses to 4–18 h of food deprivation in the common vole (Microtus arvalis) and the tundra vole (Microtus oeconomus). Both species exhibited rapid decreases in the plasma and liver carbohydrate concentrations during phase I of fasting and the decline in the liver glycogen level was more pronounced in the tundra vole. The plasma thyroxine concentrations of the common vole decreased after 4 h. Lipid mobilization (phase II of fasting) was indicated by the increased plasma free fatty acid levels after 8–18 (the common vole) or 4–18 h (the tundra vole) and by the elevated lipase activities. In the tundra vole, the plasma ghrelin concentrations increased after 12 h possibly to stimulate appetite. Both species showed increased liver lipid concentrations after 4 h and plasma aminotransferase and creatine kinase activities after 12–18 h of food deprivation implying liver dysfunction and skeletal muscle damage. No signs of stimulated protein catabolism characteristic to phase III of fasting were present during 18 h without food.     

Gene conversion in the mitochondrial genome on interspecific hybridization in voles of the <Emphasis Type="Italic">Clethrionomys</Emphasis> genus

The phenomenon of interspecific hybridization accompanied by transfer of the mitochondrial genome from the northern red-backed vole (Clethrionomys rutilus) to the bank vole (Cl. glareolus) in northeastern Europe is well known already for 25 years. However, the possibility of recombination between homologous segments of maternal and paternal mtDNAs of the voles during fertilization was not previously studied. Analysis of data on variability of nucleotide sequences of the mitochondrial gene for cytochrome b in populations of red-backed and bank voles in the area of their sympatry has shown that as a result of interspecific hybridization, the mitochondrial gene pool of bank voles contains not only mtDNA haplotypes of red-backed vole females, but also mtDNA haplotypes of bank voles bearing short nucleotide tracts of red-backed vole mtDNA. This finding supports the hypothesis that an incomplete elimination of red-backed vole paternal mtDNA during the interspecific hybridization between bank vole females and red-backed vole males leads to the gene conversion of bank vole maternal mtDNA tracts by homologous ones of mtDNA of red-backed vole males.     

Cyclic voles and shrews and non-cyclic mice in a marginal grassland within European temperate forest

Cyclic population dynamics of small mammals are not restricted to the boreal and arctic zones of Eurasia and North America, but long-term data series from lower latitudes are still less common. We demonstrated here the presence of periodic oscillations in small mammal populations in eastern Poland using 22-year (1986–2007) trapping data from marginal meadow and river valley grasslands located in the extensive temperate woodland of Białowieża Primeval Forest. The two most common species inhabiting meadows and river valleys, root vole Microtus oeconomus and common shrew Sorex araneus, exhibited synchronous periodic changes, characterised by a 3-year time lag as indicated by an autocorrelation function. Moreover, the cycles of these two species were synchronous within both habitats. Population dynamics of the striped field mouse Apodemus agrarius was not cyclic. However, this species regularly reached maximum density 1 year before the synchronized peak of root voles and common shrews, which may suggest the existence of interspecific competition. Dynamics of all three species was dominated by direct density-dependent process, whereas delayed density dependent feedback was significant only in the root vole and common shrew. Climatic factors acting in winter and spring (affecting mainly survival and initial reproduction rates) were more important than those acting in summer and autumn and affected significantly only the common shrew. High temperatures in winter and spring had positive effects on autumn-to-autumn changes in abundance of this species, whereas deep snow in combination with high rainfall in spring negatively affected population increase rates in common shrew.