Influence of soil density on root development and growth of oats

Summary Combinations of three grades of density of topsoil and of subsoil in artificial profiles have been used to study the influence of soil density on growth of the roots of oats. The soil was humous sand.The development of roots proved better the less compact the soil is. In the very dense soil rootgrowth was markedly reduced. It is likely that mechanical resistance is the only reason for the restriction of the growth hereby.Whereas a moderate growth of roots was possible even in the most densely packed soil, such a dense subsoil could absolutely not been penetrated by roots coming from a loose topsoil. This is presumably not due to a lack of support in the loose soil, but to an insufficient osmotic pressure in the roots.The hampered rootgrowth in compacted soil limited the uptake of water and nutrients and hereby reduced the development of the tops of plants.     

Dynamics of ammonia-oxidizing communities in barley-planted bulk soil and rhizosphere following nitrate and ammonium fertilizer amendment

Oxidation of ammonia by nitrifying microorganisms is a major pathway that fertilizer nitrogen (N) may take upon application to agricultural soils, but the relative roles of bacterial (AOB) vs. archaeal (AOA) ammonia oxidizers are controversial. We explored the effects of various forms of mineral N fertilizer on the AOB and AOA community dynamics in two different soils planted with barley. Ammonia oxidizers were monitored via real-time PCR and terminal restriction fragment length polymorphism analysis of bacterial and archaeal amoA genes following the addition of either [NH?]?SO?, NH?NO? or KNO?. AOB and AOA communities were also studied specifically in the rhizospheres of two different barley varieties upon [NH?]?SO? vs. KNO? addition. AOB changed in community composition and increased in abundance upon ammonium amendment in bulk soil and rhizosphere, with changes in bacterial amoA copy numbers lagging behind relative to changes in soil ammonium. In both soils, only T-RFs corresponding to phylotypes related to Nitrosospira clade 3a underwent significant community changes. Increases in AOB abundance were generally stronger in the bulk soil than in the rhizosphere, implying significant ammonia uptake by plant roots. AOA underwent shifts in the community composition over time and fluctuated in abundance in all treatments irrespective of ammonia availability. AOB were thus considered as the main agents responsible for fertilizer ammonium oxidation, while the functions of AOA in soil N cycling remain unresolved.     

Influence of bulk and tapped density on the determination of the thermal conductivity of powders and blends

The aim of this study was to evaluate a non-steady-state needle sensor to determine the thermal conductivity (lambda) of powders and their blends. It was investigated how lambda of different powders was influenced by (1) bulk vs tapped density, (2) moisture content of the powders, and (3) blending time of the powders. Different powders were evaluated: 2 lactose powders with different properties, a microcrystalline cellulose powder, a cornstarch powder, and 3 herbal extracts. The results show that the values of lambda are highly dependent on the bulk and tapped density of the powders. Bulk density measurements were generally not sensitive enough to detect the moisture content within a powder. The tapped density measurements were reliable and highly reproducible and could differentiate between the nature of a powder and the powder moisture content. Measurements of lambda were able to be used to monitor the powder blending process. To be able to use thermal conductivity measurements to characterize powder properties in quality control, the powder density must be defined because changes in density affect lambda. Using thermal conductivity as a measure for process analytical technology seems to be feasible and can add valuable information to the process under investigation.     

The effect of soil warming on bulk soil vs. rhizosphere respiration

There has been considerable debate on whether root/rhizosphere respiration or bulk soil respiration is more sensitive to long-term temperature changes. We investigated the response of belowground respiration to soil warming by 3 °C above ambient in bare soil plots and plots planted with wheat and maize. Initially, belowground respiration responded more to the soil warming in bare soil plots than in planted plots. However, as the growing season progressed, a greater soil-warming response developed in the planted plots as the contribution of root/rhizosphere respiration to belowground respiration declined. A negative correlation was observed between the contribution of root/rhizosphere respiration to total belowground respiration and the magnitude of the soil-warming response indicating that bulk soil respiration is more temperature sensitive than root/rhizosphere respiration. The dependence of root/rhizosphere respiration on substrate provision from photosynthesis is the most probable explanation for the observed lower temperature sensitivity of root/rhizosphere respiration. At harvest in late September, final crop biomass did not differ between the two soil temperature treatments in either the maize or wheat plots. Postharvest, flux measurements during the winter months indicated that the response of belowground respiration to the soil-warming treatment increased in magnitude (response equated to a Q ₁₀ value of 5.7 compared with ∼2.3 during the growing season). However, it appeared that this response was partly caused by a strong indirect effect of soil warming. When measurements were made at a common temperature, belowground respiration remained higher in the warmed subplots suggesting soil warming had maintained a more active microbial community through the winter months. It is proposed that any changes in winter temperatures, resulting from global warming, could alter the sink strength of terrestrial ecosystems considerably.     

The effect of sulphide on nitrate reduction in soil

Summary Soil, amended with sodium sulphide, was incubated anaerobically with added nitrate, and the nitrogenous endoproducts-gaseous-N, nitrate-, nitrite- and ammonium-N—measured.Sulphide depressed gaseous-N production (denitrification), but stimulated the reduction of nitrate to ammonium, and, to a lesser extent, to nitrite.Saskatchewan Institute of Pedology Publication No. R84.     

Influence of soil applications of nitrogen on nitrate reductase activity,leaf and grain protein content in sorghum

Summary Three sorghum genotypes, L.187, SK5912 and RCFA×L.187 (the latter being a hybrid) were field grown under four nitrogen application rates and replicated four times. The experiments were of complete randomized plot design and conducted in 1976, 1977 and 1978.Nitrate Reductase Activity (NRA) was measured at 5, 7, 9, 11, 13, and 15 weeks and at 18, 19, 20 and 21 weeks after planting in 4th vegetative leaf and flag leaf respectively. Flag leaf, 4th leaf and grain protein contents were also measured.Nitrogen application generally increased NRA in both 4th leaf and flag leaf in the 3 genotypes at all the sampling dates.NRA of the hybrid, RCFA×L.187 was consistently higher than those of SK5912 and L.187 (both straight varieties).NRA of 4th leaf was negatively correlated with leaf protein but flag leaf protein tended to increase with applied nitrogen.Flag leaf NRA was positively and significantly correlated with grain protein indicating an important part played by the flag leaf relative to protein accumulation of the developing grain.     

Root penetration through a high bulk density soil layer: differential response of a crop and weed species

Weed control remains one of the greatest problems in agro-ecological systems. An important factor controlling crop and weed competition for below ground resources is the presence of compacted soil layers or ‘hard pans’. In a series of experiments, we investigated the ability of roots of soybean (Glycine max L.) and the weeds sicklepod (Senna obtusifolia L.) and Palmer amaranth (Amaranthus palmeri S. Wats) to penetrate through a compacted soil layer and acquire N from lower in the soil profile. Soil columns were constructed to simulate a compacted soil layer with different bulk densities ~8 cm beneath the soil surface. Results indicated that roots of the two weed species penetrated high bulk density soil layers more effectively than those of four soybean lines. Root penetration was not related with growth rates among the species or soybean genotypes. Overall root and shoot growth of the weeds was sustained when downward root growth was inhibited, while both declined with soybean, even under high fertility conditions. The weeds also acquired relatively high amounts of $^{15} {\text{N}} - {\text{NO}}_{\text{3}}^ - $ from buried patches beneath the high bulk density layers compared to soybean. The results indicate that the weed species would have a competitive advantage when plow pans are present, and an attempt is made to relate this advantage with competitive dynamics observed in the field.     

The porosity of soil aggregates from bulk soil and from soil adhering to roots

Summary Total porosity and pore-size distribution (p.s.d.) were determined in soil aggregates taken in plots planted with maize and treated with farmyard manure and three rates of compost. Soil aggregates were collected from the soil adherent to the maize roots (root soil aggregates) and from bulk soil (bulk soil aggregates). Mercury intrusion porosimetry was used to evaluate the total porosity and the p.s.d. Treatments did not affect the total porosity of the bulk soil aggregates. The same was observed for the root soil aggregates. However the total porosity of the root soil aggregates was always lower than that of the bulk soil aggregates. The loss of total porosity was found to be due to a decrease in the percentage of larger pores with respect to the total.     

Influence of stand density on soil CO2 efflux for a Pinus densiflora forest in Korea

We investigated the influence of stand density [938 tree ha⁻¹ for high stand density (HD), 600 tree ha⁻¹ for medium stand density (MD), and 375 tree ha⁻¹ for low stand density (LD)] on soil CO₂ efflux (R _S) in a 70-year-old natural Pinus densiflora S. et Z. forest in central Korea. Concurrent with R _S measurements, we measured litterfall, total belowground carbon allocation (TBCA), leaf area index (LAI), soil temperature (ST), soil water content (SWC), and soil nitrogen (N) concentration over a 2-year period. The R _S (t C ha⁻¹ year⁻¹) and leaf litterfall (t C ha⁻¹ year⁻¹) values varied with stand density: 6.21 and 2.03 for HD, 7.45 and 2.37 for MD, and 6.96 and 2.23 for LD, respectively. In addition, R _S was correlated with ST (R ² = 0.77–0.80, P < 0.001) and SWC (R ² = 0.31–0.35, P < 0.001). It appeared that stand density influenced R _S via changes in leaf litterfall, LAI and SWC. Leaf litterfall (R ² = 0.71), TBCA (R ² = 0.64–0.87), and total soil N contents in 2007 (R ² = 0.94) explained a significant amount of the variance in R _S (P < 0.01). The current study showed that stand density is one of the key factors influencing R _S due to the changing biophysical and environmental factors in P. densiflora.     

Decomposition of mangrove roots depends on the bulk density they grew in

Plant and Soil - Mangroves hold large organic carbon (C) stocks in their soils. These C stocks are mainly attributed to the high productivity and slow decomposition of the below-ground biomass....     

Effect of temperature associated with levels of bulk density on rice seedling emergence

Summary A laboratory study was conducted to find out the effect of temperatures on rice seedling emergence under different levels of bulk density. The temperatures ranging from 10 to 40°C in increments of 5°C were maintained constant with ±1°C accuracy. The bulk density levels were 1.3, 1.5, 1.7, and 1.9 g cm⁻³. Aluminum cylinders with top open and bottom provided with a removable 20-mesh brass screen, were used as soil containers. The moisture content in soil was always above field capacity which could be accomplished by placing the cylinders in a tray in which water level was maintained constant to 5 cm depth. Seedling emergence counts were taken till the 10th day of seeding. At the end of the experiment, observations on root and shoot elongations were recorded. Emergence was maximum at 25 and 30°C under 1.3 and 1.5 g cm⁻³, and decreased at 35, 20, and 15°C. As compared to the lower bulk densities, the reduction in emergence under 1.7 g cm⁻³ was smaller at 25 and 30°C than at 35°C. This was ascribed to greater seedling vigour at 25 and 30°C, as could be inferred from larger root and shoot elongation. The reduction in emergence at lower temperatures (20 and 15°C) might be due to delay in time of germination as well as less seedling vigour. The soil under 1.9 g cm⁻³ was sufficiently dense that the seedlings could not emerge except a few ones at 25 and 30°C.     

Influence of refraction on plasma density measurements

The plasma density profile in the T-11M tokamak is measured with a multichannel Cotton-Mouton polarimeter and also with a time-of-flight refractometer. Both instruments operate at frequencies in the range of 140 GHz. Since, in this case, the trajectory of the probing microwave beam deviates from a straight line, the maximum refraction angle being as large as ～0.25 rad, the measurement results should be corrected for refraction. In order to solve this problem, a computer code has been developed for calculating the trajectories of both O-and X-mode probing beams. In calculations, it is assumed that the plasma is cold and that the inequality ω ? 2πν_p (where ω is the probing frequency and ν_p is the collision frequency) is satisfied. The wavelength λ is assumed to be much less than the plasma inhomogeneity scale length, so the calculations are performed in the geometric optics approximation. The dependences of the phase difference ΔΦ (for the Cotton-Mouton polarimeter) and the propagation time of a microwave pulse (for the time-of-flight refractometer) on the linear plasma density 〈nl〉 are calculated. For comparison, similar dependences are calculated for a conventional interferometer operating at the same frequency. It is shown that, in the latter case, the influence of refraction on the measurement results is about three times less. The dependences obtained are presently being used in measurements of 〈nl〉 by means of the Cotton-Mouton polarimeter and the time-of-flight refractometer with allowance for the density profiles recovered by abelianizing the data from the multichannel polarimeter (a series of iterative Abel inversion procedures are performed for each instant of time). The code can also be used to find corrections for refraction when performing interferometric measurements in other devices.     

Iron interference in the quantification of nitrate in soil extracts and its effect on hypothesized abiotic immobilization of nitrate

Human alteration of the nitrogen cycle has stimulated research on nitrogen cycling in many aquatic and terrestrial ecosystems, where analyses of nitrate (NO₃ ⁻) by standard laboratory methods are common. A recent study by Colman et al. (Biogeochemistry 84:161–169, 2007) identified a potential analytical interference of soluble iron (Fe) with NO₃ ⁻ quantification by standard flow-injection analysis of soil extracts, and suggested that this interference may have led Dail et al. (Biogeochemistry 54:131–146, 2001) to make an erroneous assessment of abiotic nitrate immobilization in prior ¹⁵N pool dilution studies of Harvard Forest soils. In this paper, we reproduce the Fe interference problem systematically and show that it is likely related to dissolved, complexed-Fe interfering with the colorimetric analysis of NO₂ ⁻. We also show how standard additions of NO₃ ⁻ and NO₂ ⁻ to soil extracts at native dissolved Fe concentrations reveal when the Fe interference problem occurs, and permit the assessment of its significance for past, present, and future analyses. We demonstrate low soluble Fe concentrations and good recovery of standard additions of NO₃ ⁻ and NO₂ ⁻ in extracts of sterilized Harvard Forest soils. Hence, we maintain that rapid NO₃ ⁻ immobilization occurred in sterilized samples of the Harvard Forest O horizon in the study by Dail et al. (2001). Furthermore, additional evidence is accumulating in the literature for rapid disappearance of NO₃ ⁻ added to soils, suggesting that our observations were not the result of an isolated analytical artifact. The conditions for NO₃ ⁻ reduction are likely to be highly dependent on microsite properties, both in situ and in the laboratory. The so-called “ferrous wheel hypothesis” (Davidson et al., Glob Chang Biol 9:228–236, 2003) remains an unproven, viable explanation for published observations.     

Impact of crop management on intraspecific diversity of Pseudomonas corrugata in bulk soil

Colonization at sugar beet root surfaces by seedling-inoculated biocontrol strain Pseudomonas fluorescens DR54 and native soil bacteria was followed over a period of 3 weeks using a combination of immunofluorescence (DR54-targeting specific antibody) and fluorescence in situ hybridization (rRNA-targeting Eubacteria EUB338 probe) techniques with confocal laser scanning microscopy. The dual staining protocol allowed cellular activity (ribosomal number) to be recorded in both single cells and microcolonies of strain DR54 during establishment on the root. After 2 days, the population density of strain DR54 reached a constant level at the root basis. From this time, however, high cellular activity was only found in few bacteria located as single cells, whereas all microcolony-forming cells occurring in aggregates were still active. In contrast, a low density of strain DR54 was observed at the root tip, but here many of the bacteria located as single cells were active. The native population of soil bacteria, comprising a diverse assembly of morphologically different forms and size classes, initiated colonization at the root basis only after 2 days of incubation. Hence the dual staining protocol allowed direct microscopic studies of early root colonization by both inoculant and native soil bacteria, including their differentiation into active and non-active cells and into single or microcolony-forming cells.     

Influence of available aluminium on soil micro-organisms

P. ILLMER, K. MARSCHALL AND F. SCHINNER. 1995. Forest soils were selected which covered a wide range of aluminium concentrations (7 to μmol g^-1dry matter), but which differed as little as possible from one another in their soil chemical characteristics, including pH. These soils were examined with respect to microbial biomass and respiration, activity of cellulase, N-mineralization, colony-forming units of bacteria and fungi, and the concentrations of several inorganic soil components. The influences of altitude, climate, vegetation and, especially, of soil acidity could be kept to a minimum and so differences between the soil microfloras could clearly be attributed to Al concentration.
Al concentration was recognized to be the main inhibiting factor for the microbial biomass in soil. While N-mineralization was severely inhibited by aluminium, cellulase activity was hardly affected by increasing Al concentrations.
By taking the Al concentration along with various other soil chemical parameters a linear model could be developed that allowed more than 98% of the variability of the microbial biomass in soil to be explained.     

Controls on soil nitrification and stream nitrate export at two forested catchments

Dormant season inorganic nitrogen (N) leaching varies considerably among forested catchments with similar bedrock, forest cover and deposition history. Recent work has highlighted the importance of winter rain-on-snow (ROS) events as a source of winter nitrate (NO₃-N) export, but differences among streams are likely due to differences in baseflow NO₃-N concentrations, and thus soil N processes. The objective of this study was to investigate rates of N-mineralization and nitrification as well as their potential environmental controls throughout the year, but with particular focus on the winter season in south-central Ontario, Canada. Field incubations were utilized to assess differences in NO₃-N and ammonium production over time and across topographic positions in two catchments with contrasting patterns of N export. Rates of nitrification were similar to rates of total mineralization, and nitrification rates were significantly higher during the summer and spring compared with the winter and fall; however, winter nitrification was substantial, and ranged from 19 to 36 % of annual rates. Seasonal differences in nitrification were largely driven by temperature, soil moisture and inorganic N concentration in soil. Rain and melting snow infiltrated the soil during ROS events, which were associated with increased NO₃-N availability, particularly in well-drained soils, and ROS-induced increases in stream nitrate concentrations were largest at the catchment dominated by well-drained soil. Annual nitrification fluxes were almost two orders of magnitude greater than N deposition or NO₃-N leaching fluxes at either catchment. Similar rates of NO₃-N production within the two catchments suggest that consumption of NO₃-N within wet soils is responsible for the 10-fold difference in NO₃-N export between the two streams. Notably, these results suggest that consumption processes were important for reducing NO₃-N export even during winter ROS events.     

农田土壤硝酸盐积累与淋失研究进展

农田土壤硝酸盐淋失是导致地下水硝酸盐污染的主要原因。影响农田土壤中硝酸盐积累的淋失的因素很多。主要有施肥、降水、灌溉、土壤性质以及耕种制度等,过量施用氮肥,不论是单独施用无机肥、有机肥还是有机、无机混施都能造成硝酸盐在土体中大量积累;耕作和种植制度均能影响硝酸盐在土体中的积累和迁移;降水和灌溉带来的下渗水流是累积在土壤中的硝酸盐向下迁移直至淋失的必要条件,也是运载工具,而土壤中的大孔隙则是下渗水流的主要通道,农田土壤硝酸盐的积累与淋失是多种因素综合作用的结果,模型是研究和预测硝酸盐淋失的理想工具,近年来发展很快,并且得到了很好的应用。     

Rapid abiotic transformation of nitrate in an acid forest soil

Nitrate immobilization into organic matter isthought to require catalysis by the enzymes ofsoil microorganisms. However, recent studiessuggest that nitrate added to soil isimmobilized rapidly and this process mayinclude abiotic pathways. We amended living andsterilized soil with ¹⁵N-labeled nitrateand nitrite to investigate biotic and abioticimmobilization. We report rapid transformationof nitrate in incubations of the O layer offorest soils that have been sterilized toprevent microbial activity and to denaturemicrobial enzymes. Approximately 30, 40, and60% of the ¹⁵N-labeled nitrate added tolive, irradiated, or autoclaved organic horizonsoil disappeared from the extractableinorganic-N pool in less than 15 minutes. About5% or less of the nitrate was recovered asinsoluble organic N in live and sterilizedsoil, and the remainder was determined to besoluble organic N. Added ¹⁵N-nitrite,however, was either lost to gaseous N orincorporated into an insoluble organic N formin both live and sterile organic soils. Hence,the fate and pathway of apparent abioticnitrate immobilization differs from thebetter-known mechanisms of nitrite reactionswith soil organic matter. Nitrate and nitriteadded to live A-horizon soil was largelyrecovered in the form added, suggesting thatrapid conversion of nitrate to solubleorganic-N may be limited to C-rich organichorizons. The processes by which this temperateforest soil transforms added nitrate to solubleorganic-N cannot be explained by establishedmechanisms, but appears to be due to abioticprocesses in the organic horizon.