Community ecology of the terrestrial small mammals of Zakouma National Park,Chad

The terrestrial small mammal community of the Zakouma National Park (Chad) was assessed by live trapping in various habitats during the dry season. Nearly 3000 trap-nights yielded 505 captures of nine rodent and two shrew species, making up a representative small mammal community for the Sudanian savanna biotic zone. Murine rodents of the genusMastomys dominated, withM. erythroleucus andM. cf.kollmannspergeri occuring at similar abundances. The former was widespread and especially abundant in habitats with high tree cover. The latter was more localized, predominantly in annually flooded habitats characterized by a clay-rich soil, often withAcacia seyal as the main vegetation. Population structure differed between the two species, suggesting distinct reproductive strategies possibly linked with habitat preferences: theM. erythroleucus population comprised mainly young, immature individuals, whereasM. cf.kollmannspergeri was represented by older individuals, a significant fraction of which had already reproduced.Taterillus congicus andTatera kempi (gerbilline rodents), together withLemniscomys zebra, were mainly found in more open habitats with sand-rich soils.Arvicanthis niloticus, Acomys cf.johannis, Mus mattheyi andXerus erythropus were the other rodents captured, whereas shrews were represented byCrocidura fulvastra andSuncus sp.     

Small mammal diversity and dynamics within Nigeria,with emphasis on reservoirs of the lassa virus

Nigeria has a rich small mammal community, with several species implicated as carriers of zoonotic microbes such as the Lassa virus (LASV). We sought to elucidate the diversity and distribution of these animals (including known LASV reservoirs) geographically, habitat-wise and seasonally. Our DNA-assisted survey detected at least 19 small mammal species amongst 790 specimens. Diversity indices were similar between ecological zones and also between endemic and non-endemic areas for Lassa fever. Mastomys natalensis, the most renowned LASV host, was present in eight out of nine localities sampled. We also described the spatial occurrence of other known LASV hosts such as M. erythroleucus and Hylomyscus pamfi, including carriers of LASV-like arenaviruses such as Mus (Nannomys) spp. The most numerous rodents (Mastomys natalensis, M. erythroleucus, and Praomys daltoni) were captured mainly inside human dwellings. Reproductive activity occurred throughout the year, but led to population peaks for M. natalensis in the dry season and for M. erythroleucus and P. daltoni in the rainy season. Extensive geographic distribution of LASV rodent reservoirs, with population peaks in different seasons, shows that the risk of rodent-to-human transmission of LASV is greater than currently realized.     

Ecology of a typical West African Sudanian savannah rodent community

The small‐mammal community of a typical Sudanian savannah area of south‐eastern Senegal was studied by way of intensive sampling at the beginning (July) and at the end (November) of the rainy season. A total of 5931 trapnights and 200 pitfallnights yielded 767 small mammals, including 757 rodents of 12 species, as well as a few shrews and hedgehogs. Accumulation curve indicated that the rodent community was well sampled. Murine rodents were far more numerous than gerbilline rodents, and among them, Mastomys erythroleucus was the dominant species, being caught in high numbers in all habitats. Arvicanthis niloticus and Praomys daltoni were also abundant, followed by Mastomys natalensis and Gerbilliscus guineae. Abundances were high at the beginning of the rainy season when reproductive activity was low in all species. At the end of the rainy season, murine rodents were actively involved in reproduction, while gerbilline rodents were at their lowest density. Significant changes in relative abundance among habitats (including human dwellings) were observed between periods in some species, suggesting seasonal trends in habitat preferences. This may help species coexistence in this species‐rich rodent community, in an area likely to be submitted to significant habitat alterations in the years to come.     

Diversity,dynamics and reproduction in a community of small mammals in Upper Guinea,with emphasis on pygmy mice ecology

As part of a large survey on reservoirs of Lassa fever in Guinea, three villages were investigated in high endemic zone, close to Sierra Leone border. Biodiversity of the small mammal community is presented in this study through a standardized trapping in houses, cultivations and forest. Identification of the small mammals was based on morphology and by molecular technique for sibling species. Of the 1123 specimens collected in 2003–2005, we identified seventeen species (thirteen Muridae, four Soricidae), leading to high diversity (Shannon index = 1.6–1.8) and high equitability (evenness index = 0.7–0.8) in cultivations and forest. In houses conversely, the rodent community was dominated by Mastomys natalensis (95–98%), leading to low diversity and equitability. Dynamics and reproduction were investigated in two species of pygmy mice, Mus mattheyi and Mus minutoides, two species of Praomys, P. daltoni and P. rostratus, and in Mastomys erythroleucus. The pygmy mice were abundant in cultivations in early rainy season, and reproduced from rainy to dry season. Praomys daltoni was also found more abundant in cultivations and seemed to reproduce between rainy and dry season, whereas P. rostratus preferred forest and cultivations in late rainy season, and reproduced throughout the year. Finally, M. erythroleucus was more abundant in forest in dry season, and seemed to reproduce from late rainy to dry season. This species had a low occurrence (6.5%) in the Faranah’s zone, and probably lived at its southern limit in Guinea. The presence of other Murinae, such as M. natalensis, Praomys spp as possible competitors in the same habitats, is discussed. For the first time, this study relates population biology of pygmy mice with molecular identification.     

A reanalysis of Parabuthus (Scorpiones: Buthidae) phylogeny with descriptions of two new Parabuthus species endemic to the Central Namib gravel plains,Namibia

Two new thick‐tail scorpions in the genus Parabuthus Pocock, 1890 are described from the gravel plains of the Central Namib Desert, Namibia: Parabuthus glabrimanus sp. nov. ; Parabuthus setiventer sp. nov. The two new species occupy discrete distributional ranges, allopatric with the closely related species Parabuthus gracilis Lamoral, 1979 and Parabuthus nanus Lamoral, 1979. The distributions of the four species are mapped and a key provided for their identification. Revised diagnoses are provided for P. gracilis and P. nanus. The two new species are added to a previously published morphological character matrix for Parabuthus species and their phylogenetic positions determined in a reanalysis of Parabuthus phylogeny. Parabuthus setiventer sp. nov. is found to be the sister species of P. nanus, whereas P. glabrimanus sp. nov. is sister to a monophyletic group comprising P. gracilis, P. nanus, and P. setiventer sp. nov. The discovery of two new scorpion species endemic to the Central Namib gravel plains contributes to a growing body of evidence that this barren and desolate region is a hotspot of arachnid species richness and endemism. © 2010 The Linnean Society of London, Zoological Journal of the Linnean Society, 2010, 159 , 673–710.     

Host habitat patchiness and the distance decay of similarity among gastro-intestinal nematode communities in two species of <Emphasis Type="Italic">Mastomys</Emphasis> (southeastern Senegal)

Beta-diversity, or how species composition changes with geographical distance, has seldom been studied for different habitats. We present here quantitative estimates of the relationship between geographic distance and similarity of parasitic nematode communities in two closely related rodent host species that live in habitats with very different spatial configurations. In southeastern Senegal Mastomys natalensis lives exclusively inside human villages whereas M. erythroleucus is continuously distributed outside villages. Both host species and their gastro-intestinal nematodes were sampled on the same spatial scale. Beta-diversity was found to be higher in parasite communities of M. erythroleucus than in those of M. natalensis, and significantly related to geographic distance in this first species. Even on the local spatial scale studied, host dispersal limitation, and stochastic events, may affect species turnover in nematode communities of M. erythroleucus. In M. natalensis, no relationship was found between geographic distance and nematode community similarity, however, suggesting low host dispersal rates between habitat patches. Together with previous population genetic results, this study illustrates the need for different approaches with regard to dispersal in natural populations and its effect on biodiversity.     

Bispiculum inaequale n. gen. & sp. (Nematoda: Tetradonematidae) from New Zealand wood-boring beetles (Curculionidae: Platypodinae )

Abstract

A monotypic new genus, Bispiculum, is erected for B. inaequale n.sp. from the haemocoel of Platypus apicalis, P. caviceps, and P. gracilis, ambrosia beetles indigenous to New Zealand. B. inaequale is characterised by its possession of a pair of spicules and three rows of anal papillae in the male, and ‘escape-form’ juveniles. This is the first record of a tetradonematid in New Zealand, and the first of a tetradonematid from the Curculionidae. All stages are described, and the life history is discussed. The diagnosis of the Tetradonematidae is emended, the family is reviewed, and a key to species is provided.     

<Emphasis Type="Italic">Diplectanocotyla</Emphasis> Yamaguti, 1953 (Monogenea: Diplectanoidea) from <Emphasis Type="Italic">Megalops cyprinoides</Emphasis> (Broussonet) (Teleostei: Megalopidae) off Peninsular Malaysia

Two known and two new species of Diplectanocotyla Yamaguti, 1953 (D. gracilis Yamaguti, 1953, D. megalopis Rakotofiringa & Oliver, 1987, D. langkawiensis n. sp. and D. parva n. sp.) were collected from Megalops cyprinoides (Megalopidae) off Langkawi, Kedah and Matang, Perak, Peninsular Malaysia. All four species possess similar types of sclerotised male and female reproductive structures and similar soft anatomical features. The squamodisc sclerites of all four species have spine-like projections with varying degrees of visibility and shapes (sharp-pointed to triangular). In D. megalopis and D. langkawiensis n. sp. the spines are sharp-pointed and distinct on sclerites from rows 5–6 onwards. In D. gracilis and D. parva n. sp. the sclerite spines are triangular, lightly sclerotised and occur on almost all of the sclerites. D. parva n. sp. has comparatively the smallest set of anchors, bars, squamodiscs and squamodisc suckers. The anchors and bars of the other three species are almost similar in overall size, and the main distinguishing feature is the relative lengths of the inner and outer roots of the ventral anchors. In D. gracilis the outer root is very much smaller than the inner root and they are disposed almost at a right angle to each other. In D. megalopis the outer root is usually about half the length of the inner root and the roots are inclined at c.60° to each other. In D. langkawiensis n. sp. the roots are inclined at c.40° degrees and the outer root is of a similar length or only slightly shorter than the inner root. The openings of the two squamodisc suckers of all four Diplectanocotyla species are surrounded by tiny scale-like spines. Bifid tegumental spines are found in the posterior region of all four species, differing only in their extent: in D. parva n. sp. the tegumental spines are only distributed in the peduncular region and not beyond, whilst in the other three species the tegumental spines extend from the posterior level of the testis to the end of the peduncle. An amended diagnosis of Diplectanocotyla and a key to its species are appended.     

Microhabitat choice and diet of rodents in Maynugus irrigation field, northern Ethiopia

An ecological study on the choice of microhabitat and diet of small mammals was carried out in Maynugus irrigation field of the Tigray region in northern Ethiopia. Abundance of rodents was high during the reproductive phase of the agricultural plants. Mastomys erythroleucus occurred more frequently in vegetable fields, whereas Arvicanthis dembeensis was more frequent in habitats with monocot plants. Scrotal males and reproductive females consumed more food by weight than abdominal males and quiescent females. Arvicanthis dembeensis consumed more food than M. erythroleucus. Both the species consumed more food during the main rainy season. All the cultivated plants were attacked by these rodents with a degree of difference in relation to season, species, sex, age and sexual condition. As rodent attack was more intense during the fruiting phase of the plants, rodent control management should be carried out during the flowering phase.     

Quantifying disturbance resistance in an ecologically dominant species: a robust design analysis

Disturbance is now recognized as a key ecosystem process but few studies have examined its indirect effects on individuals in a population or its relationship to ecological dominance in a community. Using an ecologically dominant small mammal population in experimentally burned habitat as a model, I empirically tested the effect of disturbance on survival, abundance and fecundity and investigated whether recently burned habitat is a population sink. I also examined the effect of fire on community diversity, particularly how fire influenced dominance by bushveld gerbils Tatera leucogaster (Peters 1852). Live trapping in the first year post-fire yielded a total of 4,774 captures of 1,076 individual bushveld gerbils in a tropical savanna in southern Africa. The robust design allowed for an investigation of the effects of fire, sex and temporal variation on survival while controlling for potential differences in detection and temporary emigration. Although there were fewer individuals in burned savanna during the first 6 months post-fire, their apparent monthly survival was not significantly lowered compared with the control, with males and females surviving equally well. Fecundity, represented by proportion of females lactating, was unaffected by fire and, overall, recently burned habitat does not appear to be sink habitat. The disturbance resistance exhibited by this species is likely a contributing factor to its ecological dominance in the area, which is subject to relatively frequent fires. Results of this study highlight the need to consider disturbance regimes when evaluating patterns of species richness and evenness in an ecosystem.     

Field measurements of photosynthesis,water-use efficiency,and growth inAgropyron smithii (C3) andBouteloua gracilis (C4) in the Colorado shortgrass steppe

Summary Field measurements of gas exchange and growth were conducted on a C₃ grass,Agropyron smithii, and a C₄ grass,Bouteloua gracilis, in order to further establish the adaptive significance of the C₄ pathway under natural conditions. Maximum rates of leaf area expansion in tillers and maximum seasonal photosynthesis rates of both species occurred during the cool, early summer month of June. The occurrence of maximum growth and photosynthesis inB. gracilis during this cool period was apparently related to its occupation of warm microenvironments next to the ground surface. As temperatures increased during the midsummer, photosynthesis rates decreased to 47% and 55% of the seasonal maximum inB. gracilis andA. smithii, respectively. Water-use efficiencies in both species were similar or slightly higher forB. gracilis during June, the period of maximum growth. By mid-July, however, leaves of the C₃ grass,A. smithii, exhibited water-use efficiencies approximately half as high asB. gracilis. These differences in water-use efficiency were the result of differences in stomatal conductance, rather than differences in daily CO₂ uptake rates which were similar in both species. The results demonstrate that in certain environments there are no offset periods of growth and maximum photosynthesis during the growing season in these C₃ and C₄ species. The greater amounts of daily water use inA. smithii during the midsummer might contribute to its much greater abundance in lowland sites in the shortgrass steppe. The C₄ grass,B. gracilis, occurs in dry upland sites in addition to the more mesic lowland sites.     

Chalara lichenicola n. sp. (Deuteromycotina), a lichenicolous hyphomycete from Svalbard

The new species, Chalara lichenicola, is characterized by its diminutive, pale brown, 20–47 pm long phialophores arising without any superficial mycelium from the basal parts of the podetium of the lichen Cladonia gracilis as well as from the immature basidiomata of a Tremella sp., likewise parasitic (or saprophytic?) on the same podetia. The phialoconidia are hyaline, unicellular, cylindrical with truncate ends. 2.54.0 × 0.5–0.8 Bunim. It is the first lichenicolous hyphomycete to be included in the form-genus Chalara.     

Structure of ground‐dwelling ant communities in burned and unburned areas in Brazilian subtropical grasslands

Fire is frequently used in the management of pastures in southern Brazil, but its effects on ground‐dwelling ant communities in Brazilian subtropical grasslands is still poorly understood. Here, we compared ant species richness and composition between periodically burned and unburned areas in native grasslands of the Atlantic Forest biome. In total, we found 35 epigeic ant species in burned and unburned areas. There was slightly higher species richness in burned than in unburned areas, independent of the sampling period (season). There was a significant difference in richness over the sampling period (season effect). Species composition varied significantly between the areas, in which nine species (26%) occurred only in burned areas, eight (23%) occurred only in unburned areas, and 18 (51%) occurred in both. Four species showed a significant preference for burned sites (Camponotus crassus, Linepithema humile and two undetermined species of Pheidole and Solenopsis). Although this study did not separate fire effects on ground‐dwelling ant communities (due to sampling design), it provides new information regarding subtropical native grasslands that can be used as a baseline for future studies.     

Diversity and distribution of Chironomidae (Insecta: Diptera) of the Oued Charef basin,North-Eastern Algeria

Summary. As part of the study of the Chironomidae fauna in lotic waters of North-Eastern Algeria, nine sampling stations in the Oued Charef basin were visited monthly during a study cycle. This work collected 7615 specimens forming a list of 75 species divided into four subfamilies. For North Africa, 23 species are reported for the first time, including six species of Tanypodinae (Paramerina vaillanti, P. berkana, Procladius lugens, Thienemannimyia zousfana, Trissopelopia longimana, Trissopelopia sp. and Zavrelimyia berberi), eight species of Chironominae (Cladotanytarsus vanderwulpi, Cryptochironomus obreptans, C. supplicans, Cryptotendipes usmaensis, Polypedilum sordens, Micropsectra fallax, M. contracta and Tanytarsus sylvaticus), and nine species of Orthocladinae (Cricotopus tibialis, Chaetocladius insolitus, C. piger, Tokunagaia rectangularis, Heterotrissocladius subpilosus, Limnophyes gurgicola, Nanocladius bicolor, Rheotanytarsus distinctissimus and Smittia sp.). In Algeria, 34 species are reported for the first time: seven Tanypodinae, 15 Chironominae and 12 Orthocladinae. In addition to the species reported as new for North Africa, the following ones can be added: Macropelopia nebulosa, Harnischia curtilamellatus, Microtendipes chloris, M. confinis, Polypedilum convictum, Stictochironomus sp., Paratanytarsus dissimilis, Cricotopus fuscus, C. trifascia and Pseudosmittia sp. This study has highlighted factors that control the distribution of the Chironomidae depending on characteristics of each site and the study season. The results have shown that the occurrence and diversity of chironomid species in these streams are significantly influenced by conductivity, temperature, current velocity and the type of substratum, while altitude had no significant effect on chironomid occurrence and distribution. The Motomura analysis and the ecological indices comparison have shown that the sampled stations are widely different. Despite the extreme environmental conditions undergone by streams of this area (eutrophication, high temperatures, drought in summer and water abstraction), Oued Chaniour was the richest and most balanced community, comprising 40 mostly stenotopic species, which require undisturbed conditions.     

Phylogeny and biogeography of Carminator (Hymenoptera: Megalyridae)

Carminator Shaw is a small genus of parasitic wasps that is mainly distributed in Southeast Asia. Eight species are recognized here, including Carminator coronatus sp.n. and Carminator gracilis sp.n. A data set comprising 54 morphological characters and including all the known species of Carminator, as well as four out‐group taxa (two Cryptalyra spp., one Ettchellsia sp. and one Megalyra sp.), was assembled and analysed. Carminator is retrieved as monophyletic. All weighted analyses place Carminator affinis as the sister group to the rest of the genus. A northern clade comprising species occurring on the Japanese Isles, Taiwan and Vietnam (Carminator japonicus (Carminator gracilis sp.n. (Carminator cavus + Carminator helios))) is strongly supported and nested inside the more southerly distributed species. C. helios is found on Nakanoshima Island, which emerged post‐Pliocene, and so C. helios is considered to have dispersed there via a land‐bridge connection from the Ryukyu Islands. A key to all known species of Carminator is provided.     

Ant colonization of Maieta guianensis seedlings,an Amazon ant-plant

The ants Pheidole minutula and Crematogaster sp. are obligate inhabitants of the ant-plant Maieta guianensis. They nest and reproduce exclusively in this and a few other Amazon melastome ant-plants. Experimental transplants of uncolonized M. guianensis seedlings to sites at different distances from established colonies of these two ant species, which are sources of founding queens, have shown that distance is an important factor affecting seedling colonization by ants. The proportion of colonized seedlings and the average number of colonizations per seedling, both by Crematogaster sp. and P. minutula, decreased as distance from established colonies increased. Seedling colonization was also affected by rainfall and fewer seedlings were colonized during the dry season, especially by P. minutula, than during the rainy season. P. minutula queens usually cooperate with each other during colony foundation, a behaviour not observed among founding queens of Crematogaster sp. Competition between these two ant species for host-plants appears to be strong as 63.6% of the seedlings colonized by Crematogaster sp. were also colonized by P. minutula during a 15-month observational period. However, there was generally an interval of a few months between colonizations, possibly giving the first species to colonize the plant a better chance of domination on this plant.     

Two new <Emphasis Type="Italic">Corollospora</Emphasis> species and one new anamorph based on morphological and molecular data

Two new species of the genus Corollospora, namely, C. anglusa sp. nov. with its anamorph Varicosporina anglusa sp. nov. and C. portsaidica sp. nov., which were isolated from the coast of the Mediterranean Sea in Egypt, are described in this article based on morphological and molecular evidence. The two new species have one-septate ascospores. Corollospora anglusa resembles C. gracilis by having narrow one-septate hyaline ascospores; however, they differ in ascomata and ascospore dimensions and in pure culture characteristics. Single-ascospore culture of C. anglusa produces the conidia of its anamorph, whereas an anamorph has not been reported for C. gracilis. Varicosporina anglusa differs from the other two known Varicosporina species by having conidial branches that are filamentous, rectangularly branched, hypha like, and disarticulated into two- or one-celled fragments. Corollospora portsaidica is morphologically similar to C. cinnamomea, but the two species differ in the dimensions, shape, and ornamentation of the ascospores. The new Corollospora species were confirmed to be divergent from other similar Corollospora species based on phylogenetic analyses of partial sequences of the LSU rDNA region.     

Revision of the plant bug genus Xenocylapus Bergroth (Hemiptera: Heteroptera: Miridae: Cylapinae), with a description of Henryfulvius gracilis – a new cylapine genus and species from Ecuador

The genus Xenocylapus Bergroth, 1922 is revised. Nine new species, Xenocylapus aculeatus sp. nov., X. aquilonius sp. nov., X. bicolor sp. nov., X. globulus sp. nov., X. heissi sp. nov., X. panamaensis sp. nov., X. serrulatus sp. nov., X. tenuis sp. nov., and X. waorani sp. nov., are described from Brazil, Honduras, Mexico, and Panama. New genus and species Henryfulvius gracilis gen. nov., sp. nov. is described from Ecuador. Illustrations of the male genitalia, color photographs of dorsal and lateral views of the adult of most species, scanning electron micrographs of selected structures of X. tenuis, and keys to species of the genus Xenocylapus are provided.     

SINGLE LOCUS MICROSATELLITES IN GRACILARIALES (RHODOPHYTA): HIGH LEVEL OF GENETIC VARIABILITY WITHIN GRACILARIA GRACILIS AND CONSERVATION IN RELATED SPECIES1

Four single locus microsatellites identified in the red alga Gracilaria gracilis (Stackhouse) Steentoft, Irvine, et Farnham (Rhodophyta) were examined for allelic diversity at different spatial and taxonomic levels. First, because simple morphological diagnostic characters are often missing within the Gracilariaceae, we developed a simple and rapid method based on rDNA ITS size variation in order to verify the taxonomic status of the samples used in this study. All European (including Mediterranean samples), Argentinian, and Namibian samples used in our study were confirmed to be a homogenous G. gracilis group. By contrast, our results on rDNA ITS sizes showed that Gracilaria from Japan, initially identified as G. gracilis, was different from the rest of the G. gracilis group. Secondly, microsatellite polymorphism and conservation at the species level was tested on the worldwide collection of G. gracilis and within a single population. The loci Gv1AAG and Gv1AAC showed no allelic variation, whereas two others, Gv1CT and Gv2CT, were highly polymorphic. All microsatellite loci were conserved within G. gracilis, except in the sample from Japan. The taxonomic status of G. gracilis from Japan is thus questionable. This study revealed a high level of within-population polymorphism (52 alleles for Gv1CT and 12 for Gv2CT). Moreover, the combination of these two loci was shown to be very powerful for identifying individuals within a population, that is, 93% of the individuals were characterized by a unique genotype. Finally, conservation of the four loci was tested in taxonomically related species of Gracilaria (G. chilensis, G. pacifica, and G. tikvahiae) and two Gracilariopsis species (Gs. sp. and Gs. longissima). The results suggest that the polymorphic locus Gv2CT may provide a valuable genetic marker within the different species of the Gracilariaceae.