烟草花叶病毒和黄瓜花叶病毒双价RNA沉默抗病载体的快速构建*

利用重组PCR技术将烟草花叶病毒(TMV)部分移动蛋白基因（△MP）和黄瓜花叶病毒（CMV）部分复制酶基因（△Rep）连接起来,获得全长约1000 bp的MP-Rep融合基因,将所得融合基因以反向重复的方式与大豆内含子相连,并定向插入到植物表达载体pBIN438上35S启动子下游,构建了含两种不同病毒来源基因的植物表达载体pBIN438-MP-Rep（i/r）。酶切和PCR鉴定证明所构建的载体与预期的设计完全一致。该研究结果为利用RNA沉默原理进行植物广谱抗病研究奠定了基础。     

利用Ⅱ型启动子转录的U6 RNA提高植物病毒表达载体在植物中表达外源基因的水平

Ⅱ型启动子转录的外源短链RNA可以竞争性抑制细胞内源mRNA的核质转运,因而可能会提高植物RNA 病毒载体表达的外源基因在植物中的积累. 为了验证这一假说,利用OE-PCR技术合成拟南芥U6-1核内小RNA序列,并构建其Ⅱ型启动子转录的植物表达载体. 以农杆菌渗滤技术,与烟草花叶病毒（Tobacco mosaic virus, TMV）表达载体共接种寄主植物本氏烟,通过对报告基因绿色荧光蛋白（green fluorescence protein, GFP）的荧光观察,并以Western印迹和ELISA测定GFP在烟草中的表达情况,分析共表达Ⅱ型启动子转录的U6 RNA对外源基因在植物中表达的作用效果. 结果表明,共接种Ⅱ型启动子转录的U6 RNA对TMV病毒表达载体表达外源基因的水平有明显的增效作用,推测RNA核质转运干扰是提高外源基因表达的可能机制.     

利用病毒载体在烟草中瞬时表达融合HBsAg基因

利用马铃薯PVX病毒载体构建了外源人工融合乙肝表面抗原HBsAg基因的表达载体,在烟草中利用农杆菌介导进行瞬时表达,以快速鉴定外源基因瞬时表达的状况以及重组蛋白的免疫活性。利用PCR技术从含有人工融合HBsAg基因的表达载体中分别扩增出LP PreS1 PreS2 S、PreS1 PreS2 S、PreS2 S序列,将其分别与PVX病毒载体pgR106连接,构建成PVX-LP、PVX-S1和PVX-S2等3个转化载体,并将此载体导入农杆菌菌株GV3101中用于侵染烟草植株叶片。感染植株经RT-PCR、RNA Dot blotting和HBsAg蛋白的ELISA检测显示,3个人工融合的HBsAg基因均可在植物体内得到转录,翻译成具有活性的蛋白。结果表明,外源融合HB-sAg基因经过植物病毒载体瞬时表达系统可以在植物系统中正常转录和翻译。     

大鼠促甲状腺激素释放激素受体1基因的克隆及其在COS-7细胞系中的表达

目的:克隆大鼠促甲状腺激素释放激素受体1(TRH-R1)基因,构建其真核表达载体,并检测该基因在非洲绿猴肾细胞系COS-7中的表达。方法:应用RT-PCR方法,以大鼠脑源RNA为模板,扩增获得TRH-R1基因,定向克隆到pDsRed2-N1中,以LipofectAMINE 2000试剂转染pDsRed2-N1-TRH-R1表达载体至COS-7细胞系中进行瞬时表达。结果:测序结果表明,从大鼠脑源总RNA中克隆到正确的TRH-R1基因全长编码序列;显微照相观察到所构建的TRH-R1表达载体质粒在COS-7细胞系中获得有效表达。结论:大鼠TRH-R1基因的克隆、真核表达载体的构建及在COS-7细胞系中表达获得成功,为进一步研究其功能奠定了基础。     

一种基于塞姆利基森林病毒复制子的新型复制子载体

RNA复制子是能自主复制的病毒RNA。基于RNA复制子的表达载体和基因疫苗比常规真核表达载体和DNA疫苗具有更大的优越性。以塞姆利基森林病毒RNA复制子衍生的真核表达载体pSFV1为骨架 ,插入CMV立即早期启动子和SV40晚期Poly(A)信号 ,构建了一种完全基于DNA的复制型表达载体pSFV1CS ,将增强型绿色荧光蛋白基因EGFP插入其中 ,构建了重组质粒pSFV1CS EGFP ,通过转染 2 93T细胞 ,证实外源基因能在其中高效表达。该载体可用于表达真核蛋白和构建复制子载体疫苗。     

逆境诱导型启动子rd29A的克隆及植物表达载体的构建

根据文献上发表的逆境诱导型启动子rd29A 序列设计并合成了一对引物, 通过PCR 的方法从拟南芥基因组中扩增到rd29A 的启动子序列。根据GenBank 中已发表的转录因子DREB1A基因的cDNA 序列设计并合成了一对引物, 通过RT-PCR 的方法从低温处理的拟南芥总RNA 中扩增出DREB1A 基因的全长cDNA 片段。以植物表达载体pBch 为基础, 构建了由rd29A 调控的DREB1A 基因的植物表达载体pBDR29A, 为利用DREB1A 基因改良植物抗逆性奠定了物质基础。     

以木糖异构酶基因xylA为选择标记的Gateway系统植物表达载体的构建

目的:构建以木糖异构酶基因xylA为筛选标记的无抗生素标记Gateway系统植物表达载体。方法:克隆大肠杆菌木糖异构酶基因xylA并用其替换植物表达载体pCAMBIA1301中的hpt基因,利用载体中的多克隆位点将Gateway Binary Vector(pH7WG2D)中酶切位点XbaⅠ和HindⅢ之间包括P35S、T35S、attR1、attR2和CmR-ccdB的片段重组入表达载体pCAMBIA1301中,构建表达载体pCAMBIA1301-xylA-GW,利用含有津田芜菁HY5基因片段的BP反应产物与载体进行LR反应,获得含有目的基因的植物表达载体pCAMBIA1301-xylA-HY5,并导入根癌农杆菌LBA4404中。结果:抗生素筛选及酶切和PCR鉴定表明成功构建了以xylA为筛选标记的无抗生素标记植物表达载体pCAMBIA1301-xylA-HY5。结论:利用木糖异构酶基因xylA结合Gateway克隆技术构建无抗生素标记植物表达载体,可简化、方便植物转基因表达载体构建。     

亲环素AtCYP1 RNA干涉载体的构建及对拟南芥发育的影响

根据拟南芥AtCYP1基因序列设计特异引物,以拟南芥总DNA为模板,扩增AtCYP1基因中344 bp转录本,插入表达载体PTCK303,构建目的基因RNA干扰载体Ubi::AtCYP1i。利用改良的农杆菌浸染技术获得拟南芥RNAi转基因株系,RT-PCR分析结果表明转基因株系中AtCYP1基因的表达量低于野生型,表型观察结果表明RNAi转基因纯合株系抽苔时间比野生型晚3.32 d,抽苔叶片数较野生型多2.49片,其开花时间、结出第一个种荚的时间、株高等方面也与野生型存在明显差异。此结果说明AtCYP1可能参与了拟南芥的早花发育过程,为进一步研究其在植物生长发育中的功能奠定了基础。     

玉米蔗糖磷酸合成酶(SPS)基因的克隆及表达载体的构建

利用RT-PCR方法从玉米幼苗叶片总RNA中克隆出玉米的蔗糖磷酸合成酶(SPS)基因的全长cDNA片段。该片段与文献报道的序列具有99%的同源性。并分别构建了以双CaMV35S为启动子,以Tnos为终止子的植物双元表达载体PBISPS和以Pcab为启动子,以T35S为终止子的植物表达载体PBSPS,其中PBISPS含有NPTⅡ选择标记基因,PBSPS不含选择标记基因。     

拟南芥psy基因cDNA的克隆及其植物表达载体的构建

为了获得胚乳组织特异性表达八氢番茄红素的转基因小麦,以拟南芥幼叶RNA为模板,由特异型引物通过RT-PCR一步法得到大小约为1.3kb的基因片段,将此片段连接在克隆载体pMD18-T进行测序,结果表明,该基因片段为八氢番茄红素合成酶基因(psy)cDNA片段。将psy基因片段正向插入植物表达载体pLRPT中高分子量麦谷蛋白亚基基因1Dx5启动子与nos终止子之间,pLRPT载体无1Dx5基因开放阅读框,运用菌落PCR对重组子进行筛选与鉴定,说明拟南芥psy基因已正确插入pL-RPT,成功构建了植物表达载体pLRPTPSY。     

Baseline Sensitivity of Populations of Phytophthora capsici from China to Three Carboxylic Acid Amide (CAA) Fungicides and Sequence Analysis of Cholinephosphotranferases from a CAA‐sensitive Isolate and CAA‐resistant Laboratory Mutants

During 2006–2008, 572 isolates of Phytophthora capsici were collected from seven provinces in China, and their sensitivities to three carboxylic acid amides (CAA), dimethomorph, flumorph and pyrimorph were determined. Of these isolates, 90 isolates without a history of exposure to CAA fungicides (CAAs) were used to set up the baseline sensitivity. Baseline EC₅₀ values ranged from 0.122 to 0.203 (mean ± SD, 0.154 ± 0.022) μg ml^?1 for dimethomorph, from 0.301 to 0.487 (mean ± SD, 0.373 ± 0.043) μg ml^?1 for flumorph and from 0.557 to 0.944 (mean ± SD, 0.712 ± 0.082) μg ml^?1 for pyrimorph, respectively. The other 482 isolates were tested with a single discriminatory dose and were completely inhibited at 0.5 μg ml^?1 of dimethomorph. Four CAA‐resistant mutants were generated by repeated exposure to dimethomorph in vitro. As compared to the parental wild‐type isolate, the four CAA‐resistant mutants showed similar fitness in hyphal growth, sporulation in vitro and pathogenicity in vivo. Mutants resistant to CAAs in the in vitro assay caused visible lesions on pepper stems or roots treated with the recommended dose of dimethomorph. Previous studies upon the mode of action of CAAs suggested that these fungicides maybe inhibit phospholipid biosynthesis and that the primary target could be the cholinephosphotranferase (CPT), which is referred to aminoalcoholphosphotransferases (AAPTs). We sequenced and analyzed two CPT (AAPT1 and AAPT2) genes in P. capsici. Based on the cDNA sequence, we found that the AAPT1 and AAPT2 gene span 1538 and 1459 bp and were interrupted by five and three introns, respectively. There was no difference between the parental wild‐type isolate and the four CAA‐resistant mutants in the amino acid sequences of AAPT1 and AAPT2 gene. So, it was assumed that the resistance to dimethomorph was not due to mutations in the amino acid sequence of these two possible target genes.     

猪传染性胃肠炎病毒纤突糖蛋白在毕赤酵母中的分泌表达

目的:利用巴斯德毕赤酵母表达系统表达猪传染性胃肠炎病毒(TGEV)纤突糖蛋白S。方法:根据GenBank中猪TGEV纤突糖蛋白S全基因设计一对引物,并在5'引物和3'引物中引入EcoRⅠ、NotⅠ酶切位点,2.2kb的目的基因S经PCR扩增后克隆于pBS-T载体,再将S基因经双酶切从T载体切下并与穿梭质粒pPIC9k连接,SalⅠ线性化重组穿梭质粒pPIC9k-S,电转化于毕赤酵母GS115感受态细胞,G418筛选鉴定阳性重组子,经甲醇诱导,SDS-PAGE检测诱导后上清。结果:对pPIC9k-S重组酵母表达载体的测序证实已成功克隆了猪TGEVS基因;重组酵母菌诱导表达后,SDS-PAGE检测结果显示表达产物的相对分子质量约为82×103,且S蛋白以可溶性形式分泌表达于胞外。结论:利用巴斯德毕赤酵母真核表达系统成功表达了猪传染性胃肠炎病毒(河北分离株)纤突糖蛋白S。     

Gene silencing in chick embryos with a vector-based small interfering RNA system

In this paper, the use of vector-based RNA interference (RNAi) to specifically interfere with gene expression in chick embryos is reported. In ovo electroporation was carried out to transfer a small interfering RNA (siRNA) expression vector into chick embryos. En2 was chosen for the target gene because the family gene, En1, is expressed in a similar pattern. Four sets of 19-mer sequences were designed with the En2 open reading frame region connected to a sequence of short hairpin RNA (shRNA), which exerts siRNA effects after being transcribed, and inserted into pSilencer U6-1.0 vector. En2 and En1 expression were suppressed by the siRNA whose sequence completely matched En2 and En1. Suppression occurred when the siRNA sequence differed by up to two nucleotides from the target sequence. The sequence that differed by four nucleotides from the target gene did not show siRNA effects. One set that completely matched the En2 target did not show siRNA effects, which may be due to location of the siRNA in the target gene. Thus, multiple sets of shRNA must be prepared if we are to consider. This system will greatly contribute to the analysis of function of genes of interest, because the target gene can be silenced in a locally and temporally desired manner.     

TMV复制酶基因靶向的RNA干涉载体构建

以TMV复制酶基因作为RNAi的靶向序列,应用RT－PCR法获得目的DNA序列。依据RNAi机制,以酶切后连接的方法将目的DNA序列正向、反向锚定连接到pUCCRNAi载体质粒,构建含目的序列反向重复结构的RNA干涉中间载体;反向重复结构酶切后插入含超强启动子的pC2300-35s-OCS表达载体,重组的表达载体质粒经冻融法转化到只含辅助质粒的根癌农杆菌中,完成双元载体系统的构建。每步的重组子经特异引物PCR验证和酶切验证有相应的特异条带存在,且测序鉴定序列正确。确认成功构建了TMV复制酶基因靶向的RNAi双元载体,为RNAi技术在植物病毒病害防治中的应用奠定基础。     

针对miR-221 基因干扰慢病毒载体的构建及其有效靶序列的 筛选与检测

目的:构建携带人miR-221基因的miRNA干扰慢病毒载体并寻找其有效靶序列,为胶质瘤的研究提供一种新的方法。方法:合成含干扰序列的双链DNAoligo直接连入酶切后的RNA干扰载体上。将产物转入细菌感受态细胞,对长出的克隆进行PCR鉴定,阳性克隆即为目的基因RNA干扰慢病毒载体质粒。再将目的基因与目的载体分别进行双酶切,纯化酶切产物后进行定向连接,其产物转入细菌感受态细胞,再对PCR鉴定阳性的克隆进行测序和分析比对,比对正确即为融合蛋白过表达质粒载体,然后将两种质粒共转染入293T细胞,用westernbolt法检测其有效敲减靶序列。结果:重组质粒经测序鉴定证明各转录模板完整、正确插入到相应质粒中,共转染后发现编号为PscSI576的靶点干扰效果最好。结论:本实验成功构建了人miR-221基因的RNA干扰慢病毒载体,并找到了有效的干扰靶序列。     

树干毕赤酵母木糖还原酶基因的克隆及在大肠杆菌中的表达

根据NCBI中的木糖还原酶基因序列设计引物,利用高保真聚合酶克隆树干毕赤酵母木糖还原酶基因,加A后克隆到质粒pGM-T中,测序验证.然后将目的基因克隆到舍有强启动子的穿梭表达载体p424GPD中,构建含有XYL1基因的重组质粒p424GPD-XYL1.将p424GPD-XYL1转化到大肠杆菌中,提取总蛋白,聚丙烯酰胺凝胶电泳分析.酶活测定确定木糖还原酶基因XYL1在大肠杆菌中得到活性表达,表明表达载体构建成功.表达载体的成功构建为后续构建重组酿酒酵母利用木糖发酵奠定基础.     

针对miR-221基因干扰慢病毒载体的构建及其有效靶序列的筛选与检测

目的：构建携带人miR-221基因的miRNA干扰慢病毒载体并寻找其有效靶序列,为胶质瘤的研究提供一种新的方法。方法：合成含干扰序列的双链DNAoligo直接连入酶切后的RNA干扰载体上。将产物转入细菌感受态细胞,对长出的克隆进行PCR鉴定,阳性克隆即为目的基因RNA干扰慢病毒载体质粒。再将目的基因与目的载体分别进行双酶切,纯化酶切产物后进行定向连接,其产物转入细菌感受态细胞,再对PCR鉴定阳性的克隆进行测序和分析比对,比对正确即为融合蛋白过表达质粒载体,然后将两种质粒共转染入293T细胞,用westernbolt法检测其有效敲减靶序列。结果：重组质粒经测序鉴定证明各转录模板完整、正确插入到相应质粒中,共转染后发现编号为PscSI576的靶点干扰效果最好。结论：本实验成功构建了人miR-221基因的RNA干扰慢病毒载体,并找到了有效的干扰靶序列。     

Mapping candidate genes for oleate biosynthesis and their association with unsaturated fatty acid seed content in soybean

The development of high-oleate soybean germplasm is hindered by the lack of knowledge of the genetic factors controlling oleate phenotypic variation. In the present study, several candidate genes implicated in oleate biosynthesis were mapped and their cosegregation with oleate, linoleate and linolenate quantitative trait loci (QTLs) was investigated. FAD2-2C, a previously described ω-6 desaturase isoform, was localized on linkage group E; whereas, a novel FAD2-2 isoform, designated as FAD2-2D, mapped on linkage group N. In addition, two isoforms were identified for the aminoalcoholphosphotransferase-encoding GmAAPT1 gene, denoted AAPT1a and AAPT1b. A database query suggested that only one functional copy of the FAD6 gene, encoding a plastid localized ω-6 desaturase, exists in the soybean genome. AAPT1a and FAD6 mapped on linkage group D1b, 23.40 cM apart. Linolenate QTLs with minor effects were identified near the FAD6 and AAPT1a markers in two segregating populations. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.